Tree Position

A0-T-YP2191 > P305 > L413/PF1409/V31 > M168/PF1416 > P143 > M89/PF2746 > F1329/M3658 > F929 > IJK > IJ > M170 > Z2647 > L460 > M436 > M223 > Y3721 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
8502
28816667-G-T 26670520-G-T A*
13687072-G-T 11531396-G-T A*
19939332-G-A 17827452-G-A P5_Prx A*
26025590-G-A 23879443-G-A P1_Y1 A*
26229169-G-C 24083022-G-C P1_Y1 A*
19922511-C-T 17810631-C-T P5_Prx A*
19737095-G-A 17625215-G-A P5_Prx A*
19581403-A-T 17469523-A-T P5_Prx YA*
20620070-T-C 18458184-T-C P4_Prx A*
20744449-G-A 18582563-G-A P4_Prx A*
24239525-A-G 22093378-A-G P3_b1 A*
6281389-C-T 6413348-C-T IR3_Dst A*
6230429-A-G 6362388-A-G IR3_Dst A*
18374321-G-A 16262441-G-A P6_Prx A*
18317072-C-A 16205192-C-A P6_Prx A*
17990636-G-A 15878756-G-A P7_Prx YA*
28817206-G-A 26671059-G-A A*
28817859-A-C 26671712-A-C A*
24268137-C-A 22121990-C-A P3_b1 A*
21066632-T-C 18904746-T-C BY130208 YY+
8258447-T-G 8390406-T-G Y139023 YY+
8491977-T-C 8623936-T-C Y139048 YY+
21342483-A-G 19180597-A-G Y139018 YY+
9006615-G-C 9169006-G-C BY77261 Y+
9042248-C-T 9204639-C-T Y139037 Y+
8245713-A-G 8377672-A-G Y139043 YY+
20647-G-C +
13230810-G-A 11075134-G-A BY84740 +
10617823-A-G FGC15103 Y6083 +
19186035-C-T 17074155-C-T Y139031 Y+
6964770-A-G 7096729-A-G Y139070 YY+
6371561-A-G 6503520-A-G Y9443 BY524 +
16927238-G-A 14815358-G-A FGC15098 Y3675 YY+
16458561-A-C 14346681-A-C Y139074 YY+
15745129-G-T 13633249-G-T Y139045 YY+
15603321-C-T 13491441-C-T Y139054 YY+
22476299-C-T 20314413-C-T DYZ19 +
8469883-G-A 8601842-G-A Y139028 YY+
22465807-A-G 20303921-A-G DYZ19 +
22662761-C-A 20500875-C-A Y139055 YY+
26326186-G-C 24180039-G-C BY48324 P1_Y1 +
14937823-A-ATTTTATTTTC 12825893-C-A L1229 10×TTTTC+
22906445-C-A 20744559-C-A FGC67849 YY+
23604593-T-C 21442707-T-C Y139066 YY+
22511717-G-T 20349831-G-T DYZ19 +
11033-G-T +
7410-C-T +
14879536-C-CTG 12767606-C-CTG 16×TG*
21934980-ATT-A,AT 19773094-ATT-A,AT 17×T*
8094511-A-G 8226470-A-G YY*
8094535-A-G 8226494-A-G FGC35392 YY*
16236233-A-AAAACAAAC 14124353-A-AAAACAAAC 8×AAAC*
56836790-A-G *
7133086-A-AAACAAC 7265045-A-AAACAAC 11×AAC*
13450513-CCACTCCACTT-C,CCACTC 11294837-CCACTCCACTT-C,CCACTC *
18964149-C-CTG 16852269-C-CTG 10×TG*
8715306-G-GA 8847265-G-GA 14×A*
5396162-A-G 5528121-A-G **
5572494-C-A 5704453-C-A **
4123955-G-T 4255914-G-T **
10769903-C-A **
5796270-A-G 5928229-A-G **
5307835-C-A 5439794-C-A **
5808253-C-A 5940212-C-A **
5852039-C-A 5983998-C-A **
5878917-G-T 6010876-G-T **
5396070-G-T 5528029-G-T **
4956036-C-A 5087995-C-A **
5212083-C-A 5344042-C-A **
5010637-G-T 5142596-G-T **
4317768-C-A 4449727-C-A **
4815091-G-T 4947050-G-T **
10785313-C-T **
6273856-AC-A 6405815-AC-A IR3_Dst **
4713721-C-A 4845680-C-A **
4537832-A-C 4669791-A-C **
10785798-C-T **
4537829-T-AGG 4669788-T-AGG **
4537815-G-A 4669774-G-A **
4471613-C-A 4603572-C-A **
4457377-C-A 4589336-C-A **
4396409-C-A 4528368-C-A **
10767880-C-A **
10752403-C-A **
10766924-C-A **
9302775-C-A 9465166-C-A **
3836816-C-A 3968775-C-A **
10667011-T-TAA **
8807290-C-A 8939249-C-A **
8835168-C-A 8967127-C-A **
10667010-A-ACTC **
9034412-G-A 9196803-G-A **
9713683-A-G 9876074-A-G IR3_Prx **
8350249-G-T 8482208-G-T **
9877262-A-C 10039653-A-C **
9928870-G-T 10091261-G-T **
10664799-C-A **
10001058-CTT-C 10163449-CTT-C 16×T**
10655079-C-T **
10655080-A-G **
10667021-T-TTCCTC **
10667025-A-ACTCCG **
10764643-T-G **
7111927-C-A 7243886-C-A **
6358500-C-A 6490459-C-A **
10763795-C-A **
6714356-G-T 6846315-G-T **
6720359-G-T 6852318-G-T **
10660839-C-G **
10747477-C-A **
7143095-C-A 7275054-C-A **
7717635-C-CTTTCCTT 7849594-C-CTTTCCTT **
7199366-TG-T 7331325-TG-T **
10744917-C-T **
7225382-C-A 7357341-C-A **
10672108-C-T **
10667044-C-A **
10667034-C-G **
3879038-C-A 4010997-C-A **
5495229-T-A 5627188-T-A **
3676266-C-A 3808225-C-A **
11019158-C-A **
10769898-T-C **
10949594-ATTCCG-A **
10751921-G-T **
10660838-A-T **
13453398-C-G 11297722-C-G **
15975347-C-A 13863467-C-A **
22122122-C-A 19960236-C-A **
15928408-C-A 13816528-C-A **
14562785-C-A 12450985-C-A **
8807534-G-T 8939493-G-T **
10869306-A-AGTATG **
10869315-G-A **
10869317-T-C **
10947303-C-A **
22601552-C-A 20439666-C-A **
28804051-G-A 26657904-G-A **
13462197-C-T 11306521-C-T **
13236642-C-A 11080966-C-A **
18996511-C-A 16884631-C-A **
15995604-C-A 13883724-C-A **
2769237-G-GA 2901196-G-GA 11×A**
18910866-C-A 16798986-C-A **
10749181-C-A **
56841169-C-T **
56841180-C-A **
56841188-GT-G **
28742024-C-A 26595877-C-A **
5924411-C-A 6056370-C-A **
13988838-C-A 11868132-C-A **
9945356-G-T 10107747-G-T **
28732974-G-T 26586827-G-T **
10677681-G-T **
18653496-C-A 16541616-C-A **
13894216-C-A 11773510-C-A **
3111739-C-A 3243698-C-A **
10769891-C-T **
13466117-T-A 11310441-T-A **
3403261-C-CA 3535220-C-CA 30×A**
21127338-GA-G 18965452-GA-G **
21747631-T-C 19585745-T-C **
10914908-C-T **
5495224-C-T 5627183-C-T **
10791591-C-A **
16034729-G-T 13922849-G-T **
14512558-G-A 12400763-G-A **
4609106-G-T 4741065-G-T **
13461228-C-A 11305552-C-A **
10686035-C-A **
13461231-G-C 11305555-G-C **
13461247-G-T 11305571-G-T **
2758858-A-G 2890817-A-G **
2791435-G-T 2923394-G-T **
3012644-G-T 3144603-G-T **
3246084-A-G 3378043-A-G **
3347067-C-A 3479026-C-A **
10767620-C-A **
24389995-C-A 22243848-C-A **
13480751-C-G 11325075-C-G **
10860872-A-C **
13480765-A-C 11325089-A-C **
28797811-T-G 26651664-T-G **
28765365-C-A 26619218-C-A **
10925337-T-A **
10925340-A-T **
21435043-CA-C 19273157-CA-C **
10869330-A-C **
28601534-C-A 26455387-C-A **
14234641-C-A 12113935-C-A **
24369592-C-A 22223445-C-A **
10785831-C-CACTGT **
16926077-C-A 14814197-C-A **
24406495-C-A 22260348-C-A **
14316349-A-C 12195643-A-C **
3728798-G-T 3860757-G-T **
10884676-C-A **
10785813-C-T **
10947308-CATTCT-C **
10797595-T-TATATA **
18940698-A-G 16828818-A-G **
18480060-A-C 16368180-A-C P6_Dst **
18618348-G-T 16506468-G-T **
18744494-ATGTATTAATAT-A 16632614-ATGTATTAATAT-A **
18748682-G-A 16636802-G-A **
18754982-A-C 16643102-A-C **
18898318-C-T 16786438-C-T **
18989475-G-A 16877595-G-A **
18384297-C-A 16272417-C-A P6_Gap **
19023348-C-A 16911468-C-A **
19055460-A-C 16943580-A-C **
19250229-C-A 17138349-C-A **
19438078-G-T 17326198-G-T **
19465829-C-A 17353949-C-A **
19678755-A-G 17566875-A-G P5_Prx **
19733304-T-A 17621424-T-A P5_Prx **
18385098-C-A 16273218-C-A P6_Gap **
18247385-A-C 16135505-A-C **
20143084-G-T 18031204-G-T P5_Dst **
16746276-T-A 14634396-T-A **
16007117-T-G 13895237-T-G **
16034723-G-T 13922843-G-T **
16341062-G-T 14229182-G-T **
16345129-T-G 14233249-T-G **
16428147-C-A 14316267-C-A **
16577009-T-A 14465129-T-A **
16622924-C-T 14511044-C-T **
17036837-C-T 14924957-C-T **
17638153-C-A 15526273-C-A **
17103994-G-T 14992114-G-T **
17158485-C-CT 15046605-C-CT **
17211372-A-G 15099492-A-G **
17306676-C-A 15194796-C-A **
17317707-G-T 15205827-G-T **
17328980-A-T 15217100-A-T **
17549213-C-A 15437333-C-A **
19997610-G-T 17885730-G-T P5_Prx **
20143122-C-A 18031242-C-A P5_Dst **
15762286-G-T 13650406-G-T **
28370052-G-T 26223905-G-T P1_gr2 **
23600026-T-C 21438140-T-C **
23808277-T-G 21646391-T-G **
23954207-C-A 21808060-C-A **
24406521-C-A 22260374-C-A **
24406991-G-T 22260844-G-T **
26326154-T-C 24180007-T-C P1_Y1 **
27435867-C-A 25289720-C-A P1_Y2 **
28429685-C-T 26283538-C-T P1_gr2 **
22651512-G-A 20489626-G-A **
28518972-A-C 26372825-A-C **
28530748-C-A 26384601-C-A **
28658337-C-A 26512190-C-A **
28775428-C-A 26629281-C-A **
28814575-G-T 26668428-G-T BY152233 **
56840964-C-A **
56872106-C-A **
23048981-G-T 20887095-G-T **
22353027-G-C 20191141-G-C DYZ19 **
20143148-G-T 18031268-G-T P5_Dst **
21786373-G-T 19624487-G-T **
20434853-C-A 18272967-C-A P5_Dst **
20453999-G-T 18292113-G-T P5_Dst **
20842659-C-A 18680773-C-A P4_Dst **
21125451-G-T 18963565-G-T **
21267968-G-A 19106082-G-A **
21322036-C-A 19160150-C-A **
21386607-T-A 19224721-T-A **
21824881-C-A 19662995-C-A **
22316755-G-T 20154869-G-T DYZ19 **
21836285-C-A 19674399-C-A **
21911959-C-A 19750073-C-A **
21969323-G-T 19807437-G-T **
22048537-C-A 19886651-C-A **
22146389-C-A 19984503-C-A **
22197761-G-T 20035875-G-T **
22255151-G-T 20093265-G-T DYZ19 **
15941460-C-A 13829580-C-A **
15445428-C-A 13333548-C-A **
10811064-C-A **
10998113-C-A **
10947966-T-G **
10977028-C-A **
10980619-T-A **
10980622-G-T **
10984898-C-A **
10990118-C-G **
10990194-G-T **
11005115-C-T **
10939630-G-GCCCTC **
11005284-C-A **
11005420-C-A **
11006121-C-A **
11011697-T-G **
11021456-C-CCAGTG **
11027361-C-A **
11027362-AC-A **
10947289-G-A **
10937348-C-A **
11033695-C-A **
10876663-C-A **
10812509-C-A **
10820669-C-A **
10825648-ATTCCG-A **
10847085-TTCCAC-T **
10856021-C-A **
10869725-C-A **
10876533-C-A **
10881710-C-A **
10914899-T-G **
10883757-C-A **
10884634-CT-C **
10910968-G-T **
10914835-G-T **
10914857-C-G **
10914858-T-G **
10914872-G-C **
11033611-C-A **
11035786-G-T **
15210902-G-T 13098988-G-T **
14512564-G-A 12400769-G-A **
13839815-GA-G 11719109-GA-G **
13898831-G-T 11778125-G-T **
14025787-A-T 11905081-A-T **
14077924-G-A 11957218-G-A **
14100881-T-G 11980175-T-G **
14424053-G-T 12303328-G-T **
14502006-C-A 12390211-C-A **
14517393-C-A 12405594-C-A **
13821813-C-T 11701107-C-T Y139076 **
14573077-G-T 12461277-G-T **
14658273-T-C 12546338-T-C **
14779464-G-T 12667534-G-T **
14836360-C-A 12724427-C-A **
14948798-ATATATATAT-A 12836872-ATATATATAT-A **
15044296-C-A 12932386-C-A **
15106514-C-A 12994602-C-A **
13839811-G-GA 11719105-G-GA **
11674967-C-A **
13223121-A-T 11067445-A-T **
13480823-G-A 11325147-G-A **
13394711-C-A 11239035-C-A **
13445043-G-C 11289367-G-C **
13453396-T-A 11297720-T-A **
13462323-C-A 11306647-C-A **
13466078-G-T 11310402-G-T **
13480790-C-G 11325114-C-G **
13480813-T-A 11325137-T-A **
13480824-A-G 11325148-A-G **
11669064-C-A **
13576637-CTT-C 11420961-CTT-C 14×T**
13583011-C-A 11427335-C-A **
13705410-A-T 11549734-A-T **
13705420-C-G 11549744-C-G **
13710913-A-G 11555237-A-G **
11643824-G-GA **
11643828-CA-C **
10967301-G-T **
10935639-T-C **
20886779-TAAAA-T 18724893-TAAAA-T P4_Dst 32×A**
17561861-G-T 15449981-G-T **
9302726-C-A 9465117-C-A **
7591204-A-AT 7723163-A-AT 11×T**
10672864-C-T **
10672865-C-A **
10672871-A-T **
13466058-G-T 11310382-G-T **
10666985-G-T **
19223094-CT-C 17111214-CT-C 10×T**
10746896-T-G **
28798763-C-A 26652616-C-A **
10746911-T-C **
2651883-CTTTTTT-C 2783842-CTTTTTT-C 19×T**
10760760-C-A **
10977016-C-A **
16703376-C-A 14591496-C-A **
11027333-C-T **
10804875-G-C **
13453365-A-T 11297689-A-T **
10992336-ACTCC-A **
13468160-C-T 11312484-C-T **
11003741-T-C **
11003744-A-AGGCCT **
11003749-A-G **
11003750-C-G **
21905283-CAAA-C 19743397-CAAA-C 16×A**
10826951-T-C **
10995792-T-G **
18346521-T-A 16234641-T-A P6_Prx **
19429883-C-A 17318003-C-A **
56836132-G-GTTCCT **
10826948-T-C **
10826950-G-A **
58992073-C-A 56845926-C-A **
10755571-ACATTC-A **
22703595-CA-C 20541709-CA-C 30×A**
10992316-A-T **
10939635-T-C **
11005117-T-C **
11005138-C-T **
11005168-T-A **
11005170-T-C **
19600491-G-T 17488611-G-T P5_Prx **
22996927-C-A 20835041-C-A **
10764605-C-T **
11005099-G-C **
10927432-C-T **
20557675-C-A 18395789-C-A P5_Dst **
19853784-C-A 17741904-C-A P5_Prx **
14468403-TA-T 12347672-TA-T 10×A**
10849807-T-C **
10849809-T-C **
11005108-G-C **
19055446-G-T 16943566-G-T **
56838691-T-A **
11015191-A-C **
18346552-G-T 16234672-G-T P6_Prx **
10772572-GTTCCA-G **
10842500-A-T **
14926420-G-. 12814485-A-G **
18908108-GTGTA-G 16796228-GTGTA-G **
11015182-T-C **
13485701-C-A 11330025-C-A **
13461286-G-T 11305610-G-T **
10995795-A-ATTACC **
13466058-GC-G 11310382-GC-G **
28797854-A-T 26651707-A-T **
10746658-AATTCC-A **
14358399-C-A 12237694-C-A **
10971227-C-CTCCAT **
13485687-C-A 11330011-C-A **
10992330-CA-C **
10992309-C-A **
10849814-A-C **
10768676-T-G **
3550598-A-C 3682557-A-C A18760 **
10799572-T-A **
10815353-T-A **
10815335-C-G **
19853797-T-A 17741917-T-A P5_Prx **
10768693-T-A **
10989455-C-T **
13457743-T-TGAA 11302067-T-TGAA **
11021482-A-C **
10969263-T-A **
10947310-T-C **
10667005-A-G **
10785783-G-C **
10785809-C-T **
10834165-T-C **
13457741-C-A 11302065-C-A **
19853792-T-A 17741912-T-A P5_Prx **
10768713-C-A **
10934893-A-ACCTT **
10781191-G-C **
10781212-C-T **
10805435-A-C **
10988583-T-A **
10768700-T-TTGAAC **
11027320-C-T **
13457726-CA-T 11302050-CA-T **
10927431-G-T **
10927384-C-T **
10664803-T-G **
10678622-C-T **
10678634-A-G **
10678638-C-T **
11016390-T-G **
10764597-T-C **
22255147-G-T 20093261-G-T DYZ19 **
13466054-C-G 11310378-C-G **
10689053-C-CACTGT **
10847504-C-T **
10847508-A-T **
10847518-T-A **
10809591-T-A **
10785349-T-A **
10689049-A-T **
10689067-C-A **
10847469-TTTCAC-T **
10994268-T-G **
10994278-T-G **
10994293-T-A **
10994315-C-A **
10994320-C-A **
17038319-CTTT-C 14926439-CTTT-C 13×T**
13457755-C-G 11302079-C-G **
10847480-T-G **
10847468-G-A **
11027328-C-T **
16475271-C-A 14363391-C-A **
19128671-C-A 17016791-C-A **
10790457-C-T **
10992322-T-C **
11015177-T-C **
11021492-C-T **
10992283-C-A **
10776159-G-T **
10847461-C-G **
10776192-C-T **
10776197-C-T **
10815293-A-C **
11016364-C-T **
11016389-C-T **
7626187-G-GT 7758146-G-GT 11×T**
10768712-C-A **
10849811-T-A **
18201167-C-A 16089287-C-A **
10934891-T-TC **
13872332-C-A 11751626-C-A **
10914881-A-G **
14102794-GTCTATCTA-G 11982088-GTCTATCTA-G 11×TCTA**
10849837-T-C **
10849831-A-T **
10849824-C-T **
10849760-C-T **
10849737-A-T **
10849803-T-A **
21187934-C-A 19026048-C-A **
15190047-ATTT-A 13078133-ATTT-A 15×T**
21491100-G-T 19329214-G-T **
7487269-C-A 7619228-C-A IR1_L **
11005118-A-T **
13466023-T-C 11310347-T-C **
10654393-A-G **
10849842-T-C **
7152623-C-A 7284582-C-A **
23176810-AG-A 21014924-AG-A **
13710885-T-A 11555209-T-A **
8672918-C-A 8804877-C-A **
15733878-TCA-T 13621998-TCA-T **
10869311-C-A **
10769960-G-C **
7166634-A-T 7298593-A-T **
4961075-C-A 5093034-C-A **
56830290-TTCCAC-T **
10655095-A-G **
17387381-C-A 15275501-C-A **
4931060-C-A 5063019-C-A **
10654377-C-G **
10654410-T-C **
11658772-G-T **
17501812-C-A 15389932-C-A **
15374511-C-A 13262631-C-A **
10820626-C-A **
10989491-C-A **
3271516-C-T 3403475-C-T **
13474638-G-T 11318962-G-T **
3342287-AT-A 3474246-AT-A 10×T**
58848209-GCATTC-G 56742637-CAATGG-C 4×CATTC**
56844662-G-T **
13213889-G-A 11058213-G-A **
26282879-C-A 24136732-C-A P1_Y1 **
22602448-A-G 20440562-A-G **
10875155-C-A **
13468179-C-T 11312503-C-T **
11005116-A-G **
19377439-GAAGA-G 17265559-GAAGA-G 15×AAGA**
10654459-T-G **
58993998-G-T 56847851-G-T **
14384498-G-T 12263794-G-T **
10799683-G-T **
10799669-T-C **
7338307-C-A 7470266-C-A **
20886819-C-A 18724933-C-A P4_Dst **
15191358-C-A 13079444-C-A **
5024203-A-AGT 5156162-A-AGT 13×GT**
13839810-G-A 11719104-G-A **
9441598-C-A 9603989-C-A **
23167802-CT-C 21005916-CT-C 10×T**
17864190-C-A 15752310-C-A **
7088159-C-A 7220118-C-A **
13466016-T-G 11310340-T-G **
6444865-C-A 6576824-C-A **
2810390-G-TT 2942349-G-TT **
10668322-T-A **
58977130-G-A 56830983-G-A **
15249097-C-A 13137183-C-A **
10865302-A-G **
10865287-T-C **
10865286-T-C **
10865284-T-A **
10865271-T-C **
10785803-C-T **
10994402-C-T **
10809597-T-C **
10847534-C-T **
10847532-A-T **
10847531-A-G **
10797939-C-G **
10797929-C-G **
58848235-C-T 56742636-G-A **
10797927-T-C **
58984808-G-C 56838661-G-C **
21987285-C-A 19825399-C-A **
58993939-T-A 56847792-T-A **
20557680-C-A 18395794-C-A P5_Dst **
21993814-C-A 19831928-C-A **
58993952-C-T 56847805-C-T **
58996670-ACT-A 56850523-ACT-A **
10664819-C-G **
10664809-C-CCGTGT **
4956079-C-CT 5088038-C-CT 13×T**
21818110-AT-A 19656224-AT-A 9×T**
10925511-T-C **
10804887-C-T **
10925548-G-C **
10776131-GC-T **
4928923-T-A 5060882-T-A **
18346524-TAC-T 16234644-TAC-T P6_Prx **
28815161-G-A 26669014-G-A DC712 **
15532405-C-A 13420525-C-A **
16279434-C-A 14167554-C-A **
10834577-T-G **
9944161-C-A 10106552-C-A **
10949594-A-T **
24264513-CT-C 22118366-CT-C P3_b1 18×T**
8776572-A-T 8908531-A-T **
11646282-GCAGTC-G **
22044105-C-A 19882219-C-A **
11650704-C-A **
19346663-C-A 17234783-C-A **
13453399-C-T 11297723-C-T **
13453351-T-C 11297675-T-C **
14319565-A-G 12198859-A-G **
10885460-T-C **
17994869-C-CA 15882989-C-CA P7_Prx **
22885972-C-A 20724086-C-A **
24643338-G-T 22497191-G-T P3_t2 **
11005134-C-A **
5125813-C-A 5257772-C-A **
10799673-C-T **
10891989-A-T **
5073749-C-A 5205708-C-A **
10767641-C-A **
13453361-T-G 11297685-T-G **
13935560-C-A 11814854-C-A **
14697094-C-A 12585160-C-A **
13489895-G-A 11334219-G-A ***
14191088-CT-C 12070382-CT-C 11×T***
7567753-C-CT 7699712-C-CT 25×T***
13489474-C-A 11333798-C-A ***
13478256-CGAG-C,CGCG 11322580-CGAG-C,CGCG ***
22134050-G-T 19972164-G-T ***
28679303-TA-T 26533156-TA-T 10×A***
2824726-A-AC 2956685-A-AC 10×C***
58982814-G-A 56836667-G-A ***
58972876-GTCCAT-G 56826729-GTCCAT-G 4×TCCAT***
13489047-G-T 11333371-G-T ***
28794503-A-G 26648356-A-G ***
22815505-G-GTT,GTTT 20653619-G-GTT,GTTT 20×T***
16905869-TC-T 14793989-TC-T ***
21547859-C-CTG 19385973-C-CTG 17×TG***
17865075-A-AT 15753195-A-AT 10×T***
22812629-CTT-C 20650743-CTT-C 28×T***
3833652-C-CA 3965611-C-CA 16×A***
58975545-T-G 56829398-T-G ***
6969012-G-GA 7100971-G-GA 10×A***
19492290-CAAAAAAAAAAAAAAAAAAA-C,CA 17380410-CAAAAAAAAAAAAAAAAAAA-C,CA 37×A***
16345600-G-GA 14233720-G-GA 11×A***
16484096-A-AT 14372216-A-AT 12×T***
13453204-CACTCA-C 11297528-CACTCA-C ***
58975852-G-A 56829705-G-A ***
13489629-CCACCCA-C,CCGCCCA 11333953-CCACCCA-C,CCGCCCA ***
58972053-A-T 56825906-A-T ***
58975708-A-G 56829561-A-G ***
6808295-C-CA 6940254-C-CA 13×A***
16908451-T-TA 14796571-T-TA 21×A***
58972062-C-G 56825915-C-G ***
10776089-C-A ***
10780669-T-C ***
16897643-CAAAAA-C 14785763-CAAAAA-C 23×A***
10911717-T-C ***
18892556-C-T 16780676-C-T ***
21105995-A-AT 18944109-A-AT 10×T***
10662880-C-A ***
7075240-CAAAA-C,CAAA 7207199-CAAAA-C,CAAA 17×A***
13486607-C-A 11330931-C-A ***
23991951-C-A 21845804-C-A ***
18264018-C-A 16152138-C-A ***
3286982-A-G 3418941-A-G ***
11033841-TGCTCC-CACTGC,T ***
21106149-C-A 18944263-C-A ***
56837368-T-A ***
5861169-C-A 5993128-C-A ***
6807716-CT-C,CTT 6939675-CT-C,CTT 14×T***
10852753-C-G ***
2879312-C-A 3011271-C-A ***
7625185-C-A 7757144-C-A ***
56837366-G-T ***
10683322-C-A ***
10662510-G-T ***
10934872-G-C,T ***
13461057-A-C 11305381-A-C ***
13255106-C-A 11099430-C-A ***
21737974-GAA-G 19576088-GAA-G 12×A***
11005582-CT-C ***
11005596-G-A ***
10783673-C-A ***
2790303-CTTT-C,CT 2922262-CTTT-C,CT 15×T***
21455897-C-A 19294011-C-A ***
15750502-CTTTT-C 13638622-CTTTT-C 18×T***
14286784-CTTT-C,CTT 12166078-CTTT-C,CTT 22×T***
15279239-C-A 13167338-C-A ***
9996602-C-A 10158993-C-A ***
13485606-A-G 11329930-A-G ***
13571092-C-A 11415416-C-A ***
11025431-ATCAAT-A,ATCCGG ***
56840658-C-A ***
19111096-C-A 16999216-C-A ***
11023023-T-A ***
10683272-CCACTC-C,CCACTG ***
18241543-C-A 16129663-C-A ***
16006617-G-T 13894737-G-T ***
15076255-C-A 12964345-C-A ***
15428476-G-T 13316596-G-T ***
10776047-T-A ***
15495460-CAAAA-C 13383580-CAAAA-C 16×A***
15616473-C-A 13504593-C-A ***
10878328-G-C ***
10776001-A-G BY83804 ***
16320326-T-C 14208446-T-C ***
3389684-C-A 3521643-C-A ***
11643773-G-C ***
11643759-G-A ***
10682499-T-C BY83684 ***
16518593-TAA-T,TA 14406713-TAA-T,TA 14×A***
11025497-T-G ***
16707089-C-A 14595209-C-A ***
18195154-ATTTTTTT-A,ATTT 16083274-ATTTTTTT-A,ATTT 29×T***
14949785-C-AA 12837859-C-AA ***
13460980-T-C 11305304-T-C ***
9014241-C-A 9176632-C-A ***
11025514-C-A ***
15342449-C-A 13230568-C-A ***
10678039-C-A,T ***
10678042-C-A,T ***
10760382-C-T ***
16913422-CAAA-C 14801542-CAAA-C 21×A***
23127414-CAA-C 20965528-CAA-C 24×A***
11025518-C-G ***
11005577-A-T ***
13453195-AC-A 11297519-AC-A ***
13453193-C-G 11297517-C-G ***
10883746-G-C ***
10971892-C-T ***
10989306-G-T ***
10852744-A-C ***
10852743-G-C ***
13196452-C-A 11040776-C-A ***
14407169-C-CT 12286467-C-CT 16×T***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 8502929000976312327545520
Used in age calculations929000976312327545520
Counts of SNPs1918
Variant counts last updated 2018-06-18 20:25:10.



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