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BigY2: 142199MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 142199 |
---|---|---|---|---|---|---|---|
hg19:Y:28816613-C-T hg38:Y:26670466-C-T | A* | ||||||
hg19:Y:19580794-C-T hg38:Y:17468914-C-T | P5_Prx | Y | A* | ||||
hg19:Y:21160360-G-A hg38:Y:18998474-G-A | FGC13495 | FGC13501 | Y | Y | + | ||
hg19:Y:17977577-G-T hg38:Y:15865697-G-T | BY43497 | Y | + | ||||
hg19:Y:3161722-C-G hg38:Y:3293681-C-G | BY57471 | + | |||||
hg19:Y:6996052-C-A hg38:Y:7128011-C-A | BY62808 | Y | Y | + | |||
hg19:Y:7219837-G-A hg38:Y:7351796-G-A | Y30123 | Y | Y | + | |||
hg19:Y:7846954-G-A hg38:Y:7978913-G-A | YP2593 FGC25573 | Y | Y | + | |||
hg19:Y:8126473-T-C hg38:Y:8258432-T-C | BY70150 | Y | Y | + | |||
hg19:Y:8291648-G-A hg38:Y:8423607-G-A | BY71445 | Y | Y | + | |||
hg19:Y:8839051-T-C hg38:Y:8971010-T-C | BY76247 | Y | Y | + | |||
hg19:Y:8997388-G-A hg38:Y:9159779-G-A | BZ1372 | Y | + | ||||
hg19:Y:10009286-C-G hg38:Y:10171677-C-G | BY82835 | Y | + | ||||
hg19:Y:13225317-G-A hg38:Y:11069641-G-A | BY84657 | + | |||||
hg19:Y:13631754-C-A hg38:Y:11476078-C-A | BY86767 | + | |||||
hg19:Y:14570441-G-A hg38:Y:12458641-G-A | BY96515 | Y | Y | + | |||
hg19:Y:14583317-G-A hg38:Y:12471517-G-A | BY96614 | Y | Y | + | |||
hg19:Y:14636660-A-C hg38:Y:12524729-A-C | BY96877 | Y | Y | + | |||
hg19:Y:14636949-G-A hg38:Y:12525018-G-A | BY96881 | Y | Y | + | |||
hg19:Y:14656050-C-A hg38:Y:12544115-C-A | BY97007 | Y | Y | + | |||
hg19:Y:16420789-A-T hg38:Y:14308909-A-T | BY107685 | Y | Y | + | |||
hg19:Y:16774126-C-A hg38:Y:14662246-C-A | BY110009 | Y | Y | + | |||
hg19:Y:17223056-G-T hg38:Y:15111176-G-T | BY113118 | Y | Y | + | |||
hg19:Y:17292931-A-G hg38:Y:15181051-A-G | BY113558 | Y | Y | + | |||
hg19:Y:17821627-G-A hg38:Y:15709747-G-A | BY117670 | Y | Y | + | |||
hg19:Y:18962689-G-C hg38:Y:16850809-G-C | BY125125 | Y | Y | + | |||
hg19:Y:19558480-A-G hg38:Y:17446600-A-G | BY129969 | Y | + | ||||
hg19:Y:21092960-C-T hg38:Y:18931074-C-T | BY130373 | Y | Y | + | |||
hg19:Y:21506465-G-A hg38:Y:19344579-G-A | BY133459 | Y | Y | + | |||
hg19:Y:22444576-C-A hg38:Y:20282690-C-A | BY219434 | DYZ19 | + | ||||
hg19:Y:22444831-A-T hg38:Y:20282945-A-T | BY37563 | DYZ19 | + | ||||
hg19:Y:22445334-A-T hg38:Y:20283448-A-T | BY219602 | DYZ19 | + | ||||
hg19:Y:22445342-A-C hg38:Y:20283456-A-C | FT456986 | DYZ19 | + | ||||
hg19:Y:23099400-A-G hg38:Y:20937514-A-G | BY142957 | Y | Y | + | |||
hg19:Y:23535737-C-T hg38:Y:21373851-C-T | BY146029 | Y | Y | + | |||
hg19:Y:23760687-T-G hg38:Y:21598801-T-G | BY147492 | Y | + | ||||
hg19:Y:24361861-G-A hg38:Y:22215714-G-A | BY149341 | + | |||||
hg19:Y:24498248-A-G hg38:Y:22352101-A-G | BY150357 | + | |||||
hg38:Y2:18983-T-C | + | ||||||
hg19:Y:22281059-C-T hg38:Y:20119173-C-T | DYZ19 | * | |||||
hg19:Y:28809903-T-C hg38:Y:26663756-T-C | * | ||||||
hg19:Y:18892195-A-T hg38:Y:16780315-A-T | BY124562 | ** | |||||
hg19:Y:27791977-TCTG-T hg38:Y:25645830-TCTG-T | P1_Y2 | ** | |||||
hg19:Y:19537991-A-C hg38:Y:17426111-A-C | CTS10559 M2259 | ** | |||||
hg19:Y:20428140-AT-A hg38:Y:18266254-AT-A | P5_Dst | 17×T | ** | ||||
hg19:Y:9439864-C-A hg38:Y:9602255-C-A | ** | ||||||
hg19:Y:3385577-C-A hg38:Y:3517536-C-A | ** | ||||||
hg19:Y:15115749-C-A hg38:Y:13003836-C-A | ** | ||||||
hg19:Y:22351200-C-T hg38:Y:20189314-C-T | DYZ19 | ** | |||||
hg19:Y:19318292-C-T hg38:Y:17206412-C-T | ** | ||||||
hg19:Y:19318270-A-G hg38:Y:17206390-A-G | ** | ||||||
hg38:Y:10746670-T-C | ** | ||||||
hg38:Y:10746680-T-A | ** | ||||||
hg38:Y:21766269-A-T | ** | ||||||
hg38:Y:10748329-T-CGACAA | ** | ||||||
hg19:Y:25571908-C-A hg38:Y:23425761-C-A | P1_gr1 | ** | |||||
hg19:Y:28659990-C-A hg38:Y:26513843-C-A | ** | ||||||
hg19:Y:19071570-C-A hg38:Y:16959690-C-A | ** | ||||||
hg19:Y:17605535-C-A hg38:Y:15493655-C-A | ** | ||||||
hg19:Y:22193204-G-T hg38:Y:20031318-G-T | ** | ||||||
hg38:Y:10648070-T-A | ** | ||||||
hg38:Y:11037145-C-CTCAAT | ** | ||||||
hg38:Y:11037177-C-T | ** | ||||||
hg38:Y:11037194-A-T | ** | ||||||
hg38:Y:10812230-T-C | ** | ||||||
hg38:Y:11018773-T-A | ** | ||||||
hg19:Y:19963796-AC-A hg38:Y:17851916-AC-A | P5_Prx | ** | |||||
hg38:Y:10766527-A-C | ** | ||||||
hg19:Y:13935764-C-A hg38:Y:11815058-C-A | ** | ||||||
hg38:Y:10813669-C-T | ** | ||||||
hg38:Y:10750673-C-A | ** | ||||||
hg38:Y:10750694-C-G | ** | ||||||
hg19:Y:13195993-C-A hg38:Y:11040317-C-A | ** | ||||||
hg38:Y:10944566-C-T | ** | ||||||
hg19:Y:16667956-C-A hg38:Y:14556076-C-A | ** | ||||||
hg19:Y:22235191-T-C hg38:Y:20073305-T-C | DYZ19 | ** | |||||
hg38:Y:10802471-C-A | ** | ||||||
hg19:Y:14780856-C-A hg38:Y:12668926-C-A | ** | ||||||
hg19:Y:18654762-C-A hg38:Y:16542882-C-A | ** | ||||||
hg38:Y:10750678-C-A | ** | ||||||
hg19:Y:7897184-G-T hg38:Y:8029143-G-T | ** | ||||||
hg19:Y:7286991-C-A hg38:Y:7418950-C-A | ** | ||||||
hg19:Y:16040967-A-ATT hg38:Y:13929087-A-ATT | 14×T | ** | |||||
hg38:Y:10661696-C-A | ** | ||||||
hg38:Y:11649493-A-G | DYZ17 | ** | |||||
hg19:Y:6133828-C-A hg38:Y:6265787-C-A | ** | ||||||
hg38:Y:10944561-C-T | ** | ||||||
hg38:Y:10944571-G-T | ** | ||||||
hg38:Y:11006423-C-G | ** | ||||||
hg19:Y:17083198-C-A hg38:Y:14971318-C-A | ** | ||||||
hg19:Y:4470066-C-A hg38:Y:4602025-C-A | ** | ||||||
hg38:Y:11016236-C-A | ** | ||||||
hg38:Y:10982104-C-A | ** | ||||||
hg38:Y:10989923-T-C | ** | ||||||
hg19:Y:2909065-TCA-T hg38:Y:3041024-TCA-T | ** | ||||||
hg19:Y:7148100-C-A hg38:Y:7280059-C-A | ** | ||||||
hg19:Y:17584295-C-T hg38:Y:15472415-C-T | ** | ||||||
hg19:Y:26199654-T-A hg38:Y:24053507-T-A | P1_Y1 | ** | |||||
hg19:Y:28500289-C-A hg38:Y:26354142-C-A | ** | ||||||
hg38:Y:10661713-C-CCTTTT | ** | ||||||
hg19:Y:2959959-C-A hg38:Y:3091918-C-A | ** | ||||||
hg19:Y:14144228-C-A hg38:Y:12023522-C-A | MF3759 | ** | |||||
hg38:Y:11018759-A-T | ** | ||||||
hg19:Y:16091152-C-A hg38:Y:13979272-C-A | ** | ||||||
hg38:Y:10961321-T-C | FT92121 | ** | |||||
hg19:Y:7208193-C-A hg38:Y:7340152-C-A | ** | ||||||
hg19:Y:17370882-C-A hg38:Y:15259002-C-A | ** | ||||||
hg19:Y:27647649-CA-C hg38:Y:25501502-CA-C | P1_Y2 | ** | |||||
hg19:Y:14395221-C-A hg38:Y:12274517-C-A | ** | ||||||
hg19:Y:22809681-A-G hg38:Y:20647795-A-G | ** | ||||||
hg19:Y:2750770-G-T hg38:Y:2882729-G-T | ** | ||||||
hg19:Y:7299138-C-A hg38:Y:7431097-C-A | ** | ||||||
hg38:Y:10812242-C-A | ** | ||||||
hg38:Y:9056288-C-A | ** | ||||||
hg19:Y:20948671-GTTT-G hg38:Y:18786785-GTTT-G | P4_Dst | ** | |||||
hg19:Y:13899393-C-A hg38:Y:11778687-C-A | ** | ||||||
hg38:Y:10812256-C-A | ** | ||||||
hg38:Y:10812258-T-C | ** | ||||||
hg19:Y:18401255-C-A hg38:Y:16289375-C-A | P6_Gap | ** | |||||
hg38:Y:11018746-A-C | ** | ||||||
hg19:Y:21852531-G-T hg38:Y:19690645-G-T | ** | ||||||
hg19:Y:14000089-G-T hg38:Y:11879383-G-T | ** | ||||||
hg19:Y:16848448-C-A hg38:Y:14736568-C-A | ** | ||||||
hg38:Y:11011047-A-G | ** | ||||||
hg19:Y:22235170-C-A hg38:Y:20073284-C-A | DYZ19 | ** | |||||
hg19:Y:20101749-A-C hg38:Y:17989869-A-C | P5_Dst | ** | |||||
hg19:Y:28818276-T-A hg38:Y:26672129-T-A | ** | ||||||
hg19:Y:22490523-C-A hg38:Y:20328637-C-A | DYZ19 | ** | |||||
hg19:Y:23491109-C-A hg38:Y:21329223-C-A | ** | ||||||
hg19:Y:13943807-C-T hg38:Y:11823101-C-T | ** | ||||||
hg38:Y:10889755-C-CCATG | ** | ||||||
hg38:Y:10889758-T-G | ** | ||||||
hg38:Y:10961273-GTCCAC-G | ** | ||||||
hg19:Y:4302375-C-A hg38:Y:4434334-C-A | ** | ||||||
hg19:Y:4049219-C-A hg38:Y:4181178-C-A | ** | ||||||
hg19:Y:15374440-AGTT-A hg38:Y:13262560-AGTT-A | ** | ||||||
hg38:Y:10860576-C-A | ** | ||||||
hg38:Y:11011784-C-A | ** | ||||||
hg19:Y:6090923-C-A hg38:Y:6222882-C-A | ** | ||||||
hg38:Y:10848934-C-T | ** | ||||||
hg19:Y:2959935-C-A hg38:Y:3091894-C-A | ** | ||||||
hg38:Y:10766391-C-CATTA | ** | ||||||
hg19:Y:5523555-C-A hg38:Y:5655514-C-A | ** | ||||||
hg38:Y:10808863-C-A | ** | ||||||
hg19:Y:4470019-C-A hg38:Y:4601978-C-A | ** | ||||||
hg38:Y:10916312-T-C | ** | ||||||
hg38:Y:10792962-T-G | ** | ||||||
hg19:Y:21235175-C-G hg38:Y:19073289-C-G | ** | ||||||
hg19:Y:19318272-T-C hg38:Y:17206392-T-C | ** | ||||||
hg19:Y:19318274-T-C hg38:Y:17206394-T-C | ** | ||||||
hg19:Y:19318275-C-T hg38:Y:17206395-C-T | Y55709 | ** | |||||
hg19:Y:28755066-C-A hg38:Y:26608919-C-A | ** | ||||||
hg19:Y:6923111-C-A hg38:Y:7055070-C-A | ** | ||||||
hg19:Y:19520801-C-A hg38:Y:17408921-C-A | ** | ||||||
hg19:Y:7224233-C-A hg38:Y:7356192-C-A | ** | ||||||
hg19:Y:19318285-A-G hg38:Y:17206405-A-G | ** | ||||||
hg19:Y:2778631-T-G hg38:Y:2910590-T-G | ** | ||||||
hg19:Y:2814848-G-T hg38:Y:2946807-G-T | ** | ||||||
hg19:Y:2856616-C-A hg38:Y:2988575-C-A | ** | ||||||
hg19:Y:3055443-A-T hg38:Y:3187402-A-T | ** | ||||||
hg19:Y:3107620-T-C hg38:Y:3239579-T-C | ** | ||||||
hg19:Y:3173353-G-A hg38:Y:3305312-G-A | ** | ||||||
hg19:Y:3202849-CT-C hg38:Y:3334808-CT-C | ** | ||||||
hg19:Y:3300511-C-A hg38:Y:3432470-C-A | ** | ||||||
hg19:Y:3388613-AGAT-A hg38:Y:3520572-AGAT-A | ** | ||||||
hg19:Y:3447227-C-A hg38:Y:3579186-C-A | ** | ||||||
hg19:Y:3556612-C-A hg38:Y:3688571-C-A | ** | ||||||
hg19:Y:3576664-G-T hg38:Y:3708623-G-T | ** | ||||||
hg19:Y:3576713-G-T hg38:Y:3708672-G-T | ** | ||||||
hg19:Y:3606845-C-A hg38:Y:3738804-C-A | ** | ||||||
hg19:Y:3641783-G-T hg38:Y:3773742-G-T | ** | ||||||
hg19:Y:3868086-A-G hg38:Y:4000045-A-G | ** | ||||||
hg19:Y:3950854-C-A hg38:Y:4082813-C-A | ** | ||||||
hg19:Y:4117928-G-T hg38:Y:4249887-G-T | ** | ||||||
hg19:Y:4216340-C-A hg38:Y:4348299-C-A | ** | ||||||
hg19:Y:4265438-G-T hg38:Y:4397397-G-T | ** | ||||||
hg19:Y:4304978-G-T hg38:Y:4436937-G-T | ** | ||||||
hg19:Y:4441658-A-G hg38:Y:4573617-A-G | ** | ||||||
hg19:Y:4591478-G-A hg38:Y:4723437-G-A | ** | ||||||
hg19:Y:4644260-C-A hg38:Y:4776219-C-A | ** | ||||||
hg19:Y:4654939-T-A hg38:Y:4786898-T-A | ** | ||||||
hg19:Y:4655760-C-A hg38:Y:4787719-C-A | ** | ||||||
hg19:Y:4692671-C-A hg38:Y:4824630-C-A | ** | ||||||
hg19:Y:4709250-C-A hg38:Y:4841209-C-A | ** | ||||||
hg19:Y:4890659-TC-T hg38:Y:5022618-TC-T | ** | ||||||
hg19:Y:4924903-T-C hg38:Y:5056862-T-C | ** | ||||||
hg19:Y:4964508-G-T hg38:Y:5096467-G-T | ** | ||||||
hg19:Y:4968809-A-T hg38:Y:5100768-A-T | ** | ||||||
hg19:Y:4995995-T-C hg38:Y:5127954-T-C | ** | ||||||
hg19:Y:5019204-G-T hg38:Y:5151163-G-T | ** | ||||||
hg19:Y:5171032-G-T hg38:Y:5302991-G-T | ** | ||||||
hg19:Y:5313401-G-T hg38:Y:5445360-G-T | ** | ||||||
hg19:Y:5426382-C-TA hg38:Y:5558341-C-TA | ** | ||||||
hg19:Y:5566396-C-A hg38:Y:5698355-C-A | ** | ||||||
hg19:Y:5765406-G-T hg38:Y:5897365-G-T | ** | ||||||
hg19:Y:5795949-A-C hg38:Y:5927908-A-C | ** | ||||||
hg19:Y:5918026-C-A hg38:Y:6049985-C-A | ** | ||||||
hg19:Y:6001808-C-A hg38:Y:6133767-C-A | FT352039 | ** | |||||
hg19:Y:6007971-G-A hg38:Y:6139930-G-A | ** | ||||||
hg19:Y:6008911-T-G hg38:Y:6140870-T-G | ** | ||||||
hg19:Y:6076657-C-A hg38:Y:6208616-C-A | ** | ||||||
hg19:Y:6094980-G-T hg38:Y:6226939-G-T | ** | ||||||
hg19:Y:6120212-C-A hg38:Y:6252171-C-A | ** | ||||||
hg19:Y:6367459-A-T hg38:Y:6499418-A-T | ** | ||||||
hg19:Y:6640930-A-G hg38:Y:6772889-A-G | ** | ||||||
hg19:Y:6663442-A-C hg38:Y:6795401-A-C | ** | ||||||
hg19:Y:6798868-C-A hg38:Y:6930827-C-A | ** | ||||||
hg19:Y:6977255-T-G hg38:Y:7109214-T-G | ** | ||||||
hg19:Y:6977256-T-G hg38:Y:7109215-T-G | ** | ||||||
hg19:Y:6984668-T-G hg38:Y:7116627-T-G | ** | ||||||
hg19:Y:7100565-C-A hg38:Y:7232524-C-A | ** | ||||||
hg19:Y:7162279-C-A hg38:Y:7294238-C-A | ** | ||||||
hg19:Y:7196491-C-A hg38:Y:7328450-C-A | ** | ||||||
hg19:Y:7200090-C-A hg38:Y:7332049-C-A | ** | ||||||
hg19:Y:7200092-C-T hg38:Y:7332051-C-T | ** | ||||||
hg19:Y:7200097-T-C hg38:Y:7332056-T-C | ** | ||||||
hg19:Y:7356356-A-C hg38:Y:7488315-A-C | ** | ||||||
hg19:Y:8173807-T-C hg38:Y:8305766-T-C | ** | ||||||
hg19:Y:8342976-G-C hg38:Y:8474935-G-C | ** | ||||||
hg19:Y:8719189-G-A hg38:Y:8851148-G-A | ** | ||||||
hg19:Y:8785973-C-A hg38:Y:8917932-C-A | ** | ||||||
hg19:Y:8812402-G-T hg38:Y:8944361-G-T | ** | ||||||
hg19:Y:8827302-C-A hg38:Y:8959261-C-A | ** | ||||||
hg19:Y:8911911-C-A hg38:Y:9043870-C-A | ** | ||||||
hg38:Y:9055700-G-T | ** | ||||||
hg38:Y:9108023-A-T | ** | ||||||
hg19:Y:9327981-C-A hg38:Y:9490372-C-A | ** | ||||||
hg19:Y:9371492-A-T hg38:Y:9533883-A-T | ** | ||||||
hg19:Y:9507889-C-T hg38:Y:9670280-C-T | ** | ||||||
hg19:Y:9522436-C-A hg38:Y:9684827-C-A | ** | ||||||
hg19:Y:9564506-TGTC-T hg38:Y:9726897-TGTC-T | IR3_Prx | ** | |||||
hg19:Y:9618133-T-A hg38:Y:9780524-T-A | IR3_Prx | ** | |||||
hg19:Y:9627423-C-A hg38:Y:9789814-C-A | IR3_Prx | ** | |||||
hg19:Y:9654434-G-T hg38:Y:9816825-G-T | IR3_Prx | ** | |||||
hg19:Y:9952083-C-A hg38:Y:10114474-C-A | ** | ||||||
hg19:Y:10065059-G-T hg38:Y:10227450-G-T | ** | ||||||
hg38:Y:10656405-C-A | ** | ||||||
hg38:Y:10688049-C-A | ** | ||||||
hg38:Y:10752518-C-A | ** | ||||||
hg38:Y:10766528-A-T | ** | ||||||
hg38:Y:10766529-A-C | ** | ||||||
hg38:Y:10766549-TTGCA-T | ** | ||||||
hg38:Y:10766560-CCCCCAG-C | ** | ||||||
hg38:Y:10766570-T-G | ** | ||||||
hg38:Y:10766575-T-A | ** | ||||||
hg38:Y:10768722-C-A | ** | ||||||
hg38:Y:10776237-T-A | ** | ||||||
hg38:Y:10780367-C-A | ** | ||||||
hg38:Y:10789247-T-G | ** | ||||||
hg38:Y:10808849-G-A | ** | ||||||
hg38:Y:10808859-A-G | ** | ||||||
hg38:Y:10808878-G-A | ** | ||||||
hg38:Y:10812243-C-T | ** | ||||||
hg38:Y:10812270-C-A | ** | ||||||
hg38:Y:10812271-C-T | ** | ||||||
hg38:Y:10812298-T-C | ** | ||||||
hg38:Y:10818761-C-T | ** | ||||||
hg38:Y:10835085-C-A | ** | ||||||
hg38:Y:10835846-C-A | ** | ||||||
hg38:Y:10846005-T-G | ** | ||||||
hg38:Y:10846306-C-T | ** | ||||||
hg38:Y:10851789-A-T | ** | ||||||
hg38:Y:10868300-A-T | FT127809 | ** | |||||
hg38:Y:10871102-C-A | ** | ||||||
hg38:Y:10889780-C-CACAGGAGTTG | ** | ||||||
hg38:Y:10895936-C-A | ** | ||||||
hg38:Y:10921415-C-A | ** | ||||||
hg38:Y:10924207-C-A | ** | ||||||
hg38:Y:10924968-T-C | ** | ||||||
hg38:Y:10924978-C-A | ** | ||||||
hg38:Y:10937285-T-G | ** | ||||||
hg38:Y:10938788-G-T | ** | ||||||
hg38:Y:10944562-T-C | ** | ||||||
hg38:Y:10944581-C-T | ** | ||||||
hg38:Y:10948260-TCATTCCATTCCATTCCAGTCCACACCATTCCATTCCTTTCCATTC-T | ** | ||||||
hg38:Y:10949178-C-A | ** | ||||||
hg38:Y:10983827-C-A | ** | ||||||
hg38:Y:10989854-T-A | ** | ||||||
hg38:Y:10993472-T-TG | ** | ||||||
hg38:Y:10993506-C-G | ** | ||||||
hg38:Y:10993518-A-T | ** | ||||||
hg38:Y:11006431-C-T | ** | ||||||
hg38:Y:11011032-T-C | ** | ||||||
hg38:Y:11011040-C-T | ** | ||||||
hg38:Y:11011041-A-G | ** | ||||||
hg38:Y:11016245-T-A | ** | ||||||
hg38:Y:11016250-T-A | ** | ||||||
hg38:Y:11018219-A-T | ** | ||||||
hg38:Y:11018734-T-C | ** | ||||||
hg38:Y:11018739-C-G | ** | ||||||
hg38:Y:11018751-C-T | ** | ||||||
hg38:Y:11018767-C-A | ** | ||||||
hg38:Y:11018769-C-T | ** | ||||||
hg38:Y:11027181-A-T | ** | ||||||
hg38:Y:11027186-C-T | ** | ||||||
hg19:Y:13222034-G-A hg38:Y:11066358-G-A | ** | ||||||
hg19:Y:13227295-T-G hg38:Y:11071619-T-G | ** | ||||||
hg19:Y:13248845-C-T hg38:Y:11093169-C-T | ** | ||||||
hg19:Y:13263127-G-T hg38:Y:11107451-G-T | ** | ||||||
hg19:Y:13484590-T-G hg38:Y:11328914-T-G | ** | ||||||
hg19:Y:13549518-G-A hg38:Y:11393842-G-A | ** | ||||||
hg19:Y:13625344-C-T hg38:Y:11469668-C-T | ** | ||||||
hg19:Y:13653936-A-T hg38:Y:11498260-A-T | DYZ17 | ** | |||||
hg19:Y:13718449-T-C hg38:Y:11562773-T-C | DYZ17 | ** | |||||
hg38:Y:11660310-A-C | DYZ17 | ** | |||||
hg38:Y:11667813-G-T | DYZ17 | ** | |||||
hg19:Y:13828437-A-T hg38:Y:11707731-A-T | DYZ17 | ** | |||||
hg19:Y:13925725-C-A hg38:Y:11805019-C-A | ** | ||||||
hg19:Y:13952253-G-A hg38:Y:11831547-G-A | FT5120 | ** | |||||
hg19:Y:13977378-A-G hg38:Y:11856672-A-G | ** | ||||||
hg19:Y:13998140-C-A hg38:Y:11877434-C-A | ** | ||||||
hg19:Y:14000498-G-T hg38:Y:11879792-G-T | ** | ||||||
hg19:Y:14013332-T-C hg38:Y:11892626-T-C | ** | ||||||
hg19:Y:14022033-A-G hg38:Y:11901327-A-G | ** | ||||||
hg19:Y:14052097-AT-A hg38:Y:11931391-AT-A | ** | ||||||
hg19:Y:14074008-A-G hg38:Y:11953302-A-G | ** | ||||||
hg19:Y:14098814-G-T hg38:Y:11978108-G-T | ** | ||||||
hg19:Y:14159625-C-A hg38:Y:12038919-C-A | ** | ||||||
hg19:Y:14273094-T-A hg38:Y:12152388-T-A | ** | ||||||
hg19:Y:14292788-C-A hg38:Y:12172082-C-A | ** | ||||||
hg19:Y:14292792-C-T hg38:Y:12172086-C-T | ** | ||||||
hg19:Y:14292814-C-G hg38:Y:12172108-C-G | ** | ||||||
hg19:Y:14412957-T-G hg38:Y:12292254-T-G | ** | ||||||
hg19:Y:14446665-G-T hg38:Y:12325938-G-T | ** | ||||||
hg19:Y:14448037-A-C hg38:Y:12327310-A-C | ** | ||||||
hg19:Y:14724597-T-A hg38:Y:12612665-T-A | ** | ||||||
hg19:Y:14726623-A-C hg38:Y:12614691-A-C | ** | ||||||
hg19:Y:14825914-C-T hg38:Y:12713981-C-T | ** | ||||||
hg19:Y:15060610-A-C hg38:Y:12948702-A-C | ** | ||||||
hg19:Y:15073185-G-T hg38:Y:12961275-G-T | ** | ||||||
hg19:Y:15073193-A-C hg38:Y:12961283-A-C | ** | ||||||
hg19:Y:15103407-G-T hg38:Y:12991495-G-T | ** | ||||||
hg19:Y:15107521-G-C hg38:Y:12995608-G-C | ** | ||||||
hg19:Y:15109871-T-G hg38:Y:12997958-T-G | ** | ||||||
hg19:Y:15111623-C-A hg38:Y:12999710-C-A | ** | ||||||
hg19:Y:15178416-G-T hg38:Y:13066502-G-T | ** | ||||||
hg19:Y:15365886-A-C hg38:Y:13254006-A-C | ** | ||||||
hg19:Y:15369058-T-A hg38:Y:13257178-T-A | ** | ||||||
hg19:Y:15575137-G-T hg38:Y:13463257-G-T | ** | ||||||
hg19:Y:15575152-G-A hg38:Y:13463272-G-A | ** | ||||||
hg19:Y:15575244-C-A hg38:Y:13463364-C-A | ** | ||||||
hg19:Y:15733754-G-A hg38:Y:13621874-G-A | ** | ||||||
hg19:Y:15761174-C-A hg38:Y:13649294-C-A | ** | ||||||
hg19:Y:15883991-C-A hg38:Y:13772111-C-A | ** | ||||||
hg19:Y:15963973-T-C hg38:Y:13852093-T-C | ** | ||||||
hg19:Y:16013229-T-C hg38:Y:13901349-T-C | ** | ||||||
hg19:Y:16013231-A-G hg38:Y:13901351-A-G | ** | ||||||
hg19:Y:16013236-C-T hg38:Y:13901356-C-T | ** | ||||||
hg19:Y:16013238-C-T hg38:Y:13901358-C-T | ** | ||||||
hg19:Y:16013239-C-G hg38:Y:13901359-C-G | ** | ||||||
hg19:Y:16246180-C-A hg38:Y:14134300-C-A | ** | ||||||
hg19:Y:16421277-C-A hg38:Y:14309397-C-A | ** | ||||||
hg19:Y:16450488-A-C hg38:Y:14338608-A-C | ** | ||||||
hg19:Y:16526553-C-A hg38:Y:14414673-C-A | ** | ||||||
hg19:Y:16829346-A-C hg38:Y:14717466-A-C | ** | ||||||
hg19:Y:16848422-C-T hg38:Y:14736542-C-T | ** | ||||||
hg19:Y:16860785-AAAG-A hg38:Y:14748905-AAAG-A | ** | ||||||
hg19:Y:17054940-T-A hg38:Y:14943060-T-A | ** | ||||||
hg19:Y:17126029-G-T hg38:Y:15014149-G-T | ** | ||||||
hg19:Y:17211501-T-G hg38:Y:15099621-T-G | ** | ||||||
hg19:Y:17222033-C-A hg38:Y:15110153-C-A | ** | ||||||
hg19:Y:17255034-T-G hg38:Y:15143154-T-G | ** | ||||||
hg19:Y:17297401-C-G hg38:Y:15185521-C-G | ** | ||||||
hg19:Y:17310821-C-G hg38:Y:15198941-C-G | ** | ||||||
hg19:Y:17481161-A-C hg38:Y:15369281-A-C | ** | ||||||
hg19:Y:17584241-C-A hg38:Y:15472361-C-A | ** | ||||||
hg19:Y:17584287-C-G hg38:Y:15472407-C-G | ** | ||||||
hg19:Y:17965778-A-G hg38:Y:15853898-A-G | ** | ||||||
hg19:Y:17965781-G-C hg38:Y:15853901-G-C | ** | ||||||
hg19:Y:17965784-G-C hg38:Y:15853904-G-C | ** | ||||||
hg19:Y:17965812-T-G hg38:Y:15853932-T-G | ** | ||||||
hg19:Y:18183455-C-A hg38:Y:16071575-C-A | ** | ||||||
hg19:Y:18244007-C-A hg38:Y:16132127-C-A | ** | ||||||
hg19:Y:18623342-G-A hg38:Y:16511462-G-A | ** | ||||||
hg19:Y:18654768-C-A hg38:Y:16542888-C-A | ** | ||||||
hg19:Y:18754863-C-A hg38:Y:16642983-C-A | ** | ||||||
hg19:Y:18795882-A-G hg38:Y:16684002-A-G | ** | ||||||
hg19:Y:18795886-A-G hg38:Y:16684006-A-G | ** | ||||||
hg19:Y:18963871-A-G hg38:Y:16851991-A-G | ** | ||||||
hg19:Y:19067951-A-C hg38:Y:16956071-A-C | ** | ||||||
hg19:Y:19088563-A-G hg38:Y:16976683-A-G | ** | ||||||
hg19:Y:19183528-T-G hg38:Y:17071648-T-G | FGC5723 | ** | |||||
hg19:Y:19300374-T-G hg38:Y:17188494-T-G | ** | ||||||
hg19:Y:19318302-G-A hg38:Y:17206422-G-A | ** | ||||||
hg19:Y:19318311-T-C hg38:Y:17206431-T-C | ** | ||||||
hg19:Y:19398118-T-A hg38:Y:17286238-T-A | ** | ||||||
hg19:Y:19558474-C-G hg38:Y:17446594-C-G | ** | ||||||
hg19:Y:19888506-C-A hg38:Y:17776626-C-A | P5_Prx | ** | |||||
hg19:Y:19888519-G-T hg38:Y:17776639-G-T | P5_Prx | ** | |||||
hg19:Y:19888526-A-T hg38:Y:17776646-A-T | P5_Prx | ** | |||||
hg19:Y:19888527-A-T hg38:Y:17776647-A-T | P5_Prx | ** | |||||
hg19:Y:19930059-ATTT-A hg38:Y:17818179-ATTT-A | P5_Prx | 13×T | ** | ||||
hg19:Y:20428050-G-T hg38:Y:18266164-G-T | P5_Dst | ** | |||||
hg19:Y:20471540-T-G hg38:Y:18309654-T-G | P5_Dst | ** | |||||
hg19:Y:20471543-A-C hg38:Y:18309657-A-C | P5_Dst | ** | |||||
hg19:Y:20471564-A-C hg38:Y:18309678-A-C | P5_Dst | ** | |||||
hg19:Y:20626064-ATAAAAAAAAAG-A hg38:Y:18464178-ATAAAAAAAAAG-A | P4_Prx | ** | |||||
hg19:Y:20628961-A-C hg38:Y:18467075-A-C | P4_Prx | ** | |||||
hg19:Y:20628988-T-C hg38:Y:18467102-T-C | P4_Prx | ** | |||||
hg19:Y:20809891-A-C hg38:Y:18648005-A-C | P4_Gap | ** | |||||
hg19:Y:21222032-T-C hg38:Y:19060146-T-C | ** | ||||||
hg19:Y:21347501-T-C hg38:Y:19185615-T-C | ** | ||||||
hg19:Y:21353220-G-T hg38:Y:19191334-G-T | ** | ||||||
hg19:Y:21408370-G-T hg38:Y:19246484-G-T | FT170630 | ** | |||||
hg19:Y:21476928-C-A hg38:Y:19315042-C-A | ** | ||||||
hg19:Y:21554916-T-G hg38:Y:19393030-T-G | ** | ||||||
hg19:Y:21604128-G-A hg38:Y:19442242-G-A | ** | ||||||
hg19:Y:21708414-T-G hg38:Y:19546528-T-G | ** | ||||||
hg19:Y:21963674-G-C hg38:Y:19801788-G-C | ** | ||||||
hg19:Y:21984018-C-A hg38:Y:19822132-C-A | ** | ||||||
hg19:Y:22027850-C-G hg38:Y:19865964-C-G | ** | ||||||
hg19:Y:22151699-A-C hg38:Y:19989813-A-C | ** | ||||||
hg19:Y:22193271-G-T hg38:Y:20031385-G-T | ** | ||||||
hg19:Y:22235192-T-C hg38:Y:20073306-T-C | DYZ19 | ** | |||||
hg19:Y:22692363-T-C hg38:Y:20530477-T-C | ** | ||||||
hg19:Y:23013853-T-A hg38:Y:20851967-T-A | ** | ||||||
hg19:Y:23255967-C-A hg38:Y:21094081-C-A | ** | ||||||
hg19:Y:23358770-G-T hg38:Y:21196884-G-T | ** | ||||||
hg19:Y:23528910-T-C hg38:Y:21367024-T-C | ** | ||||||
hg19:Y:24052533-G-T hg38:Y:21906386-G-T | P3_b1 | ** | |||||
hg19:Y:24378527-T-C hg38:Y:22232380-T-C | ** | ||||||
hg19:Y:24878214-A-C hg38:Y:22732067-A-C | g1 | ** | |||||
hg19:Y:25246356-T-A hg38:Y:23100209-T-A | P2_r1 | ** | |||||
hg19:Y:25971277-T-G hg38:Y:23825130-T-G | P1_Y1 | ** | |||||
hg19:Y:26124107-C-T hg38:Y:23977960-C-T | P1_Y1 | ** | |||||
hg19:Y:26418802-G-T hg38:Y:24272655-G-T | P1_Y1 | ** | |||||
hg19:Y:27794925-G-T hg38:Y:25648778-G-T | P1_Y2 | ** | |||||
hg19:Y:27794930-A-T hg38:Y:25648783-A-T | P1_Y2 | ** | |||||
hg19:Y:27794940-A-T hg38:Y:25648793-A-T | P1_Y2 | ** | |||||
hg19:Y:27971754-CACA-C hg38:Y:25825607-CACA-C | P1_Y2 | ** | |||||
hg19:Y:28175350-G-GAT hg38:Y:26029203-G-GAT | P1_b4 | 12×AC | ** | ||||
hg19:Y:28474503-G-A hg38:Y:26328356-G-A | ** | ||||||
hg19:Y:28556272-G-T hg38:Y:26410125-G-T | ** | ||||||
hg19:Y:28567997-A-G hg38:Y:26421850-A-G | ** | ||||||
hg19:Y:28578539-T-C hg38:Y:26432392-T-C | ** | ||||||
hg19:Y:28597147-A-T hg38:Y:26451000-A-T | ** | ||||||
hg19:Y:28618236-C-A hg38:Y:26472089-C-A | ** | ||||||
hg19:Y:28622025-G-T hg38:Y:26475878-G-T | ** | ||||||
hg19:Y:28772950-C-A hg38:Y:26626803-C-A | ** | ||||||
hg38:Y:56845279-C-A | ** | ||||||
hg19:Y:7897468-T-C hg38:Y:8029427-T-C | Y10984 | Y9080 | *** | ||||
hg19:Y:22487804-T-G hg38:Y:20325918-T-G | DYZ19 | *** | |||||
hg19:Y:7938161-GAAAA-G hg38:Y:8070120-GAAAA-G | 15×A | *** | |||||
hg38:Y:10764593-T-A | *** | ||||||
hg19:Y:2747782-A-T hg38:Y:2879741-A-T | *** | ||||||
hg19:Y:19486852-C-A hg38:Y:17374972-C-A | FGC73642 | *** | |||||
hg38:Y:10764572-T-TGA | *** | ||||||
hg19:Y:23046207-C-A hg38:Y:20884321-C-A | *** | ||||||
hg19:Y:6368739-G-T hg38:Y:6500698-G-T | *** | ||||||
hg38:Y:10769833-C-A | *** | ||||||
hg19:Y:2747786-A-T hg38:Y:2879745-A-T | 8×AT | *** | |||||
hg19:Y:7221707-C-A hg38:Y:7353666-C-A | *** | ||||||
hg38:Y:10995867-T-A | *** | ||||||
hg19:Y:23729273-A-AG hg38:Y:21567387-A-AG | *** | ||||||
hg19:Y:2747795-A-T hg38:Y:2879754-A-T | *** | ||||||
hg19:Y:2747799-A-T hg38:Y:2879758-A-T | *** | ||||||
hg19:Y:3696950-G-A hg38:Y:3828909-G-A | *** | ||||||
hg19:Y:4113385-A-AT hg38:Y:4245344-A-AT | *** | ||||||
hg19:Y:7155387-G-T hg38:Y:7287346-G-T | *** | ||||||
hg19:Y:7991394-A-G hg38:Y:8123353-A-G | *** | ||||||
hg19:Y:8124635-G-A hg38:Y:8256594-G-A | *** | ||||||
hg38:Y:10668561-C-A | *** | ||||||
hg38:Y:10684148-C-A | *** | ||||||
hg38:Y:10764619-C-T | *** | ||||||
hg38:Y:10921840-C-A | *** | ||||||
hg38:Y:10972897-C-A | *** | ||||||
hg19:Y:13299124-C-A hg38:Y:11143448-C-A | *** | ||||||
hg19:Y:13582692-A-G hg38:Y:11427016-A-G | *** | ||||||
hg19:Y:14753314-A-G hg38:Y:12641383-A-G | *** | ||||||
hg19:Y:14938066-TTGGTGAGGC-T hg38:Y:12826141-TTGGTGAGGC-T | *** | ||||||
hg19:Y:15168693-C-A hg38:Y:13056779-C-A | *** | ||||||
hg19:Y:16213521-C-A hg38:Y:14101641-C-A | *** | ||||||
hg19:Y:17773665-C-A hg38:Y:15661785-C-A | *** | ||||||
hg19:Y:19340685-A-G hg38:Y:17228805-A-G | *** | ||||||
hg19:Y:21261826-TAAA-T,TA hg38:Y:19099940-TAAA-T,TA | 26×A | *** | |||||
hg19:Y:21494944-C-A hg38:Y:19333058-C-A | *** | ||||||
hg19:Y:22426873-A-G hg38:Y:20264987-A-G | DYZ19 | *** | |||||
hg19:Y:22965835-CT-C hg38:Y:20803949-CT-C | *** | ||||||
hg19:Y:23515033-C-A hg38:Y:21353147-C-A | *** | ||||||
hg19:Y:23773906-G-T hg38:Y:21612020-G-T | *** | ||||||
hg19:Y:24362301-C-A hg38:Y:22216154-C-A | *** | ||||||
hg19:Y:24423262-C-T hg38:Y:22277115-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 142199 | 9384283 | 7682074 | 7592832 |
Used in age calculations | 9384283 | 7682074 | 7592832 |
Counts of SNPs | 26 | 24 |
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