Tree Position

R-M269 > L23 > L51 > P310 > L151 > S1194 > S1200 > S14328 > 13184964-C-G > BY46915 > BY62252 > BY125155

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY3
370111
BigY2
370111
58981256-G-C 56835109-G-C A*
10924429-C-T A*
13695042-C-G 11539366-C-G A*
56837171-C-A A*
10627608-A-C A*
10627606-C-A A*
56836282-C-T A*
56835066-C-CTCCACTCCGT A*
13449929-C-T 11294253-C-T A*
56835115-A-T A*
56835112-T-A A*
10924414-T-C A*
13489740-C-T 11334064-C-T A*
56834448-C-G A*
13451204-T-G 11295528-T-G A*
13449735-A-G 11294059-A-G A*
56835148-C-T A*
10754763-T-C A*
10754751-A-G A*
58981817-C-T 56835670-C-T A****
26328368-C-T 24182221-C-T BY226771 FT27066 P1_Y1 A*A*
28784464-T-A 26638317-T-A ***
56847277-G-T A*
58978045-C-A 56831898-C-A A*
28786638-G-A 26640491-G-A A*
13449516-C-T 11293840-C-T A*
56832236-G-A A*
18347680-C-A 16235800-C-A P6_Prx A*
13449725-A-AT 11294049-A-AT A*
13448197-T-C 11292521-T-C A*
13449065-C-G 11293389-C-G A*
56833945-C-A A*
13450308-C-T 11294632-C-T A*
56834407-C-T A*
20993598-C-CAA 18831712-C-CAA P4_Dst 17×AA*
13451428-C-G 11295752-C-G A*
56832411-C-T A*
13448135-C-T 11292459-C-T A*
5676798-T-C 5808757-T-C A*
56832027-C-T A*
56834254-A-ATTCCT A*
13450268-C-CCATTG 11294592-C-CCATTG A*
13451422-T-A 11295746-T-A A*
28816788-C-G 26670641-C-G A*
13450000-C-CCAT 11294324-C-CCAT A*
58980078-A-T 56833931-A-T A*
56831973-C-A A*
58981843-T-G 56835696-T-G A*
56844462-G-T A*
58978082-C-T 56831935-C-T A*
13449069-A-T 11293393-A-T A*
58976234-T-C 56830087-T-C A*
58980094-T-C 56833947-T-C A*
58980020-T-G 56833873-T-G A*
58980104-C-T 56833957-C-T A*
58978459-T-C 56832312-T-C A*
58982711-C-T 56836564-C-T A*
58976963-A-C 56830816-A-C A*
7746208-T-G 7878167-T-G BY67313 YY++
5457510-G-A 5589469-G-A FT235604 +
16583507-G-A 14471627-G-A BY108781 YY++
22506314-A-T 20344428-A-T A4422 DYZ19 **+
6490631-G-T 6622590-G-T FT235819 +
16182282-T-A 14070402-T-A BY105784 Y++
16201614-G-A 14089734-G-A BY105966 YY++
16371704-T-G 14259824-T-G BY107317 YY++
22270218-T-C 20108332-T-C BY34426 DYZ19 **+
5631576-G-A 5763535-G-A FT324573 *
10934788-G-A *
10973495-A-G *
10627628-A-C *
10973506-C-G *
13450513-CCACTCCACTT-C,CCACTC 11294837-CCACTCCACTT-C,CCACTC *
13451005-T-A 11295329-T-A *
6366548-G-A 6498507-G-A **
7578883-A-T 7710842-A-T **
7332952-A-G 7464911-A-G **
7311613-C-A 7443572-C-A **
2861415-G-A 2993374-G-A Y81642 **
7165735-C-A 7297694-C-A **
6882591-A-C 7014550-A-C **
6833269-G-A 6965228-G-A **
2923068-G-T 3055027-G-T **
6799328-G-T 6931287-G-T **
3277119-A-G 3409078-A-G **
6640329-C-A 6772288-C-A **
6519666-C-A 6651625-C-A **
5951342-C-A 6083301-C-A **
4459595-C-T 4591554-C-T **
5870815-G-T 6002774-G-T **
5851941-C-G 5983900-C-G **
5446968-T-G 5578927-T-G **
5191374-G-T 5323333-G-T **
5181464-G-A 5313423-G-A **
4756112-C-A 4888071-C-A **
4704203-C-A 4836162-C-A **
3389618-C-A 3521577-C-A **
3396437-C-A 3528396-C-A **
3436446-G-T 3568405-G-T **
3625906-C-A 3757865-C-A **
3878445-C-A 4010404-C-A **
4094930-G-A 4226889-G-A **
4470947-A-C 4602906-A-C **
10887457-C-T **
8151467-G-T 8283426-G-T **
10803485-C-A **
10784308-T-C **
10784333-T-A **
10784353-C-T **
10784360-C-G **
10788933-G-T **
10801444-C-G **
10808265-A-C **
10781530-C-A **
10808274-T-C **
10808286-A-T **
10808289-G-A FT432146 **
10808307-A-C **
10839926-C-G **
10847047-G-A **
10847537-C-A **
10781582-AT-A **
10778487-C-T **
8238346-A-G 8370305-A-G **
10057880-A-AC 10220271-A-AC **
8732370-G-T 8864329-G-T **
8913762-A-T 9045721-A-T **
9055244-G-T **
9925353-G-A 10087744-G-A **
2857177-G-T 2989136-G-T **
10032340-C-G 10194731-C-G **
10659220-C-T **
10766928-C-A **
10660838-ACCACT-A **
10668114-G-T **
10678587-C-A **
10692307-A-T **
10757892-C-A FGC78839 **
10762737-G-T **
10763746-C-T **
10032324-A-C 10194715-A-C **
13698453-A-G 11542777-A-G **
2683012-G-T 2814971-G-T **
10951372-C-T **
16868709-C-A 14756829-C-A **
21972328-C-A 19810442-C-A **
10942131-C-A **
26067526-C-T 23921379-C-T P1_Y1 **
26067557-T-TAC 23921410-T-TAC P1_Y1 **
6919827-C-A 7051786-C-A **
9333967-C-A 9496358-C-A **
13143700-C-G 10633186-C-G **
24904748-C-A 22758601-C-A g1 **
15012318-C-A 12900406-C-A **
21202441-T-G 19040555-T-G **
10935478-C-T **
21526925-C-A 19365039-C-A **
19162004-C-A 17050124-C-A **
13698448-T-G 11542772-T-G **
10761200-C-T **
7009251-C-A 7141210-C-A **
10754510-C-A **
14553215-C-A 12441416-C-A **
10951007-T-A **
17032585-C-A 14920705-C-A **
10808314-A-C **
10808324-C-T **
6012985-C-A 6144944-C-A **
22768840-G-TT 20606954-G-TT **
10761192-A-C **
17864911-C-A 15753031-C-A **
10658531-CCCATT-C **
24618870-T-TA 22472723-T-TA P3_t2 **
28701814-C-A 26555667-C-A **
19429707-C-A 17317827-C-A **
21208892-A-C 19047006-A-C **
11002088-C-A **
17139635-C-A 15027755-C-A **
17928892-C-A 15817012-C-A **
17187506-C-A 15075626-C-A **
10861026-C-A **
7664796-C-A 7796755-C-A **
17215767-G-T 15103887-G-T **
19507212-C-A 17395332-C-A **
10809109-G-T **
3252637-AT-A 3384596-AT-A 9×T**
7205514-C-A 7337473-C-A **
56842433-C-A **
10661640-G-T **
5785631-C-A 5917590-C-A **
7862229-C-A 7994188-C-A **
10961054-C-T **
8288771-C-A 8420730-C-A **
10758114-C-A **
5191364-G-A 5323323-G-A FT39457 **
23305994-C-A 21144108-C-A **
7534714-C-A 7666673-C-A **
10663188-G-T **
18204985-C-A 16093105-C-A 23×A**
28546830-C-A 26400683-C-A **
9942971-C-A 10105362-C-A **
10668340-C-A **
25931592-GAAGAAAGA-G 23785445-GAAGAAAGA-G P1_Y1 14×AAGA**
16307652-TTA-T 14195772-TTA-T **
22457373-C-A 20295487-C-A DYZ19 **
10935454-C-T **
10959899-C-A **
13887476-G-A 11766770-G-A Y48789 **
7166659-C-A 7298618-C-A **
15686952-C-A 13575072-C-A **
28818091-T-G 26671944-T-G **
10677845-C-A **
10935632-C-T **
7723564-C-A 7855523-C-A **
10857317-C-A **
10938893-C-A **
10869969-TTCCATTCCATTCCATTCCATTCCATTCCATTCCATTGCAC-T **
22513145-C-A 20351259-C-A **
21895573-CA-C 19733687-CA-C **
21993784-C-A 19831898-C-A **
22077306-C-A 19915420-C-A **
22085446-C-A 19923560-C-A **
22165095-T-C 20003209-T-C **
22420474-A-T 20258588-A-T DYZ19 **
22538291-A-C 20376405-A-C **
21280103-G-A 19118217-G-A **
22598714-C-A 20436828-C-A **
22993251-C-G 20831365-C-G **
23186570-G-A 21024684-G-A **
23484511-T-A 21322625-T-A **
23804365-C-A 21642479-C-A **
23837615-C-A 21675729-C-A **
21883667-C-A 19721781-C-A **
21077269-T-A 18915383-T-A **
24274117-C-A 22127970-C-A P3_b1 **
18336330-C-CA 16224450-C-CA P6_Prx **
17383682-C-G 15271802-C-G **
17387325-T-A 15275445-T-A **
17545649-G-T 15433769-G-T **
17633290-C-A 15521410-C-A **
18017106-C-A 15905226-C-A **
18150624-C-A 16038744-C-A **
18990799-C-A 16878919-C-A **
21075994-A-T 18914108-A-T **
19301242-C-A 17189362-C-A **
19867011-C-A 17755131-C-A P5_Prx **
20230173-AC-A 18068287-AC-A P5_Dst **
20438698-C-A 18276812-C-A P5_Dst **
20506409-G-T 18344523-G-T P5_Dst **
20815857-C-A 18653971-C-A P4_Gap **
23838820-G-A 21676934-G-A **
24290719-T-A 22144572-T-A P3_t1 **
17275758-AAAGGGAAGGGAAGGGAAGGGAAGGGAAGGG-A 15163878-AAAGGGAAGGGAAGGGAAGGGAAGGGAAGGG-A 10×AAGGG**
5195983-G-T 5327942-G-T **
20661836-A-C 18499950-A-C BY171909 P4_Prx **
6177409-AT-A 6309368-AT-A IR3_Dst 11×T**
13735362-C-G 11579686-C-G BY23771 **
24278260-A-AAG 22132113-A-AAG P3_b1 **
28477671-A-T 26331524-A-T **
4584290-C-A 4716249-C-A **
5701941-A-G 5833900-A-G **
56869855-C-A **
5952948-T-C 6084907-T-C **
5963952-C-T 6095911-C-T **
6262636-AGG-A 6394595-AGG-A IR3_Dst **
7965845-T-C 8097804-T-C **
8063676-C-A 8195635-C-A **
10043086-A-G 10205477-A-G **
11374-C-A **
56863189-C-A **
24450452-A-G 22304305-A-G **
26328597-C-A 24182450-C-A P1_Y1 **
24458671-G-T 22312524-G-T **
25521108-G-T 23374961-G-T P1_gr1 **
25866372-C-A 23720225-C-A P1_Y1 **
25931548-GAAGA-G 23785401-GAAGA-G P1_Y1 **
26073098-A-G 23926951-A-G P1_Y1 **
26073100-A-ATG 23926953-A-ATG P1_Y1 **
26391579-T-G 24245432-T-G P1_Y1 **
56840371-C-T **
27583314-G-T 25437167-G-T P1_Y2 **
28141825-C-A 25995678-C-A P1_b4 **
28141843-G-T 25995696-G-T P1_b4 **
28544876-C-A 26398729-C-A **
28812314-G-A 26666167-G-A **
56825141-G-T **
17353170-C-A 15241290-C-A **
17199587-C-A 15087707-C-A **
10876992-C-A **
10978745-C-A **
10962539-C-A **
10969083-C-A **
10969096-C-T **
10974383-C-T **
10974502-T-C **
10978726-T-G **
10978747-CCACTG-C **
10959308-C-A **
10984068-G-A **
10984741-C-A **
10989360-C-A **
10990580-C-A **
11020709-C-A **
11021354-C-A **
10961046-A-C **
10956726-C-A **
13216580-C-A 11060904-C-A **
10929369-T-G **
10881238-C-T **
10884564-C-A **
10884761-C-T **
10902863-C-A **
10912985-T-C **
10918534-G-T **
10935451-C-A **
10951025-C-T **
10935492-C-G **
5426434-C-A 5558393-C-A **
10940923-C-A **
10943583-C-T **
10950990-CCATTT-C **
10951017-A-G **
11024372-A-T **
13310790-C-A 11155114-C-A **
16970375-C-A 14858495-C-A **
15410933-G-A 13299053-G-A **
14355616-A-C 12234911-A-C **
14527726-G-A 12415927-G-A **
14909391-G-T 12797458-G-T **
15236047-A-G 13124133-A-G **
15375923-T-C 13264043-T-C **
15405317-C-A 13293437-C-A **
15580397-TATATAA-T 13468517-TATATAA-T **
14292439-C-A 12171733-C-A **
15616584-C-A 13504704-C-A **
15623448-C-A 13511568-C-A **
15982053-G-A 13870173-G-A **
15988221-A-C 13876341-A-C **
16017828-C-A 13905948-C-A **
16757251-T-A 14645371-T-A **
14329502-C-A 12208796-C-A **
14182155-G-T 12061449-G-T **
13409728-G-A 11254052-G-A **
13735311-G-A 11579635-G-A **
13453763-CATTAT-C 11298087-CATTAT-C **
13453779-C-G 11298103-C-G **
13466415-T-C 11310739-T-C **
13468222-C-G 11312546-C-G **
13516754-G-A 11361078-G-A **
13557961-T-A 11402285-T-A **
13735365-T-A 11579689-T-A **
14101153-CCTT-C 11980447-CCTT-C **
11663189-G-T **
11667447-A-C **
13809467-TA-T 11688761-TA-T **
13938312-A-G 11817606-A-G **
13975996-C-A 11855290-C-A **
14061413-T-G 11940707-T-G **
6339133-AC-A 6471092-AC-A IR3_Dst **
13880853-G-A 11760147-G-A **
20640409-G-T 18478523-G-T P4_Prx **
10061990-T-C 10224381-T-C **
4498271-A-G 4630230-A-G **
11643659-G-T **
13485711-A-C 11330035-A-C **
5426430-G-T 5558389-G-T **
11645962-G-C **
11645957-G-A **
11645956-T-C **
11645952-G-A **
14970258-CT-C 12858333-CT-C 10×T**
11645948-A-G **
11645939-A-T **
11645923-G-T **
18926872-CAAAA-C 16814992-CAAAA-C 17×A**
22420461-A-T 20258575-A-T DYZ19 **
14982038-C-A 12870106-C-A **
10877853-T-C **
10057894-C-T 10220285-C-T FGC32449 ~18337416-C-TFGC32449 **
22903696-C-A 20741810-C-A **
18328825-T-A 16216945-T-A P6_Prx **
10803867-T-A **
10803853-C-CTACTT **
10803851-C-T **
10803836-G-T **
10803832-A-T **
10669435-A-G **
10653466-CCAATA-C **
15406820-A-G 13294940-A-G **
10807366-A-C **
18480357-T-A 16368477-T-A P6_Dst **
10776097-C-T **
14926461-TCAAAA-T 12814526-TCAAAA-T **
20741858-T-TC 18579972-T-TC P4_Prx **
21132669-C-A 18970783-C-A **
10951018-T-C **
10807360-C-CA **
10974816-G-T FT271567 **
8600009-C-A 8731968-C-A 13×T**
28818209-A-G 26672062-A-G **
10961062-A-T **
3602774-C-A 3734733-C-A **
10875717-T-A **
10938394-T-C BY84005 **
11034783-C-T **
18853946-AT-A 16742066-AT-A 10×T**
10974805-T-C **
10772473-C-T **
13468247-C-A 11312571-C-A **
10815330-C-G **
26514950-T-C 24368803-T-C P1_Y1 10×AC**
10656344-C-G **
10761153-T-A **
10839987-T-C **
10972947-G-A **
10892125-C-G **
10653811-C-G **
10892105-C-G **
10892101-T-C **
10802435-C-G **
10802430-G-C **
10802428-C-T **
10802421-T-C **
10802416-C-A **
10802413-T-A **
10653816-C-T **
10763070-C-CCGCTT **
14977285-C-CT 12865360-C-CT 10×T**
10666946-T-A **
10994230-C-CAATCA **
10988027-T-C ***
10860784-A-T **
21130587-C-T 18968701-C-T BY130566 11×AAAT**
18706859-CAA-C 16594979-CAA-C 11×A**
8730898-C-A 8862857-C-A **
10852015-C-CTACAT **
10851998-C-A **
10756566-T-C **
10851980-T-C **
10756571-T-C FT225413 **
10892121-T-C **
10845661-C-A **
10994302-C-T **
10994267-T-A **
10994218-T-A **
10978736-G-T **
10994206-A-T **
10796132-C-T **
10756596-T-C **
10775870-C-T **
10775845-C-T **
10775820-T-C **
10902311-C-A **
9959213-G-T 10121604-G-T **
10775865-G-C BY83803 **
24363633-C-CT 22217486-C-CT 16×T**
19045010-TAAA-T 16933130-TAAA-T 16×A**
10951028-C-T **
17444684-C-A 15332804-C-A **
10974804-G-C **
26991388-G-T 24845241-G-T P1_r4 **
5796163-C-A 5928122-C-A **
9602655-T-TC 9765046-T-TC IR3_Prx **
10967540-T-C **
8690659-C-A 8822618-C-A **
10761198-A-G **
56828053-C-T **
11024368-C-A **
10883930-T-C **
10883924-T-A **
10883911-C-CCACTA **
10883909-T-C **
10883908-A-T **
10883895-C-T **
10883871-C-T **
10747027-CCA-C **
14822388-G-GT 12710455-G-GT 9×T**
10967541-T-TCCTTC **
11645969-C-T **
10810983-T-C **
10994180-T-C **
18685473-C-A 16573593-C-A **
11022951-C-A **
10839904-C-T **
11019396-C-T **
10839906-CCTTTG-C **
9055327-C-A **
6756908-CAAAA-C 6888867-CAAAA-C 26×A**
10965333-T-A **
10965331-C-A **
10935482-C-A **
27733740-G-T 25587593-G-T P1_Y2 **
10810992-A-C **
10810985-C-G **
10972969-A-T **
13468251-T-C 11312575-T-C **
10679113-A-T **
13466434-C-G 11310758-C-G **
10877861-T-G **
28438188-CAAA-C 26292041-CAAA-C P1_gr2 31×A**
10877851-T-G **
10982691-C-A **
11005498-C-CACACA **
11005479-A-T **
10935624-T-G **
10935497-C-T **
10845662-A-G **
28818071-T-G 26671924-T-G **
2729648-CTTTTTTT-C 2861607-CTTTTTTT-C 25×T**
16071904-C-A 13960024-C-A **
10802427-A-C **
7164467-CAAA-C 7296426-CAAA-C 24×A**
6315049-G-T 6447008-G-T IR3_Dst **
10851997-C-A **
10748063-T-G **
8379373-C-CT 8511332-C-CT 9×T**
10756343-A-C **
6529269-G-GT 6661228-G-GT 10×T**
10756317-C-A **
13485739-A-G 11330063-A-G **
20230152-TAA-T 18068266-TAA-T P5_Dst 16×A**
10815321-C-CATTCT **
10768566-C-A **
17874200-C-A 15762320-C-A **
6264483-T-C 6396442-T-C IR3_Dst **
21323425-T-A 19161539-T-A **
13488712-C-CTTG 11333036-C-CTTG **
17500611-G-T 15388731-G-T **
10968672-G-T **
13846976-A-T 11726270-A-T **
10974273-C-A FT438742 **
6277653-T-A 6409612-T-A IR3_Dst **
28114320-G-T 25968173-G-T P1_b4 **
11018286-TCAACA-T **
9639183-CT-C 9801574-CT-C IR3_Prx 12×T**
17030991-GCA-G 14919111-GCA-G **
10960380-A-T **
10960346-C-T **
28772871-C-A 26626724-C-A **
10887130-C-A **
10761140-C-T **
10851977-C-A **
10929654-GTCCAC-G **
17707375-TCAAAA-T 15595495-TCAAAA-T **
56756948-C-G **
17283113-GTTT-G 15171233-GTTT-G 13×T**
10836470-A-T **
10861775-T-C **
13460564-C-T 11304888-C-T **
13460554-G-A 11304878-G-A **
13460549-C-T 11304873-C-T **
10861718-A-G **
10861719-A-C **
10861744-G-T **
10841009-CTCCATTCCATTCCATTCCATTCCATTCCAT-C **
17596395-T-TAA 15484515-T-TAA 15×A**
10776094-C-A **
14367751-C-A 12247047-C-A **
10924410-T-G **
10756339-T-G **
8386132-T-G 8518091-T-G **
8386124-T-G 8518083-T-G **
10768562-C-A **
14933560-C-A 12821625-C-A **
10669430-A-C **
10669421-C-G **
10669389-C-G **
28818107-T-G 26671960-T-G **
10770598-C-A **
10924337-G-T **
10974810-C-T **
6244271-T-A 6376230-T-A IR3_Dst **
6244268-C-A 6376227-C-A FT75525 IR3_Dst **
22164546-TC-T 20002660-TC-T **
10808276-C-A **
10815320-G-A **
10836474-C-T **
10808308-T-A **
10994191-A-T **
13457938-T-C 11302262-T-C ***
21731023-C-A 19569137-C-A ***
14062053-C-A 11941347-C-A BY189063 ***
21732684-C-A 19570798-C-A ***
10763145-C-T ***
28724174-AT-A,ATT 26578027-AT-A,ATT 20×T***
10756583-A-C ***
13466041-C-T 11310365-C-T ***
2903232-CTCCTTCCT-C,CTCCT 3035191-CTCCTTCCT-C,CTCCT 18×TCCT***
10795066-C-T ***
17192867-TGG-T 15080987-TGG-T 12×G***
15507783-G-GTT 13395903-G-GTT 25×T***
10756563-C-A ***
10756559-C-T ***
13457924-T-C 11302248-T-C ***
13474720-G-C 11319044-G-C ***
10756588-C-T ***
21950631-T-C 19788745-T-C ***
5524481-ATT-A 5656440-ATT-A 13×T***
35813-G-C ***
23564764-TA-T 21402878-TA-T ***
22537158-A-G 20375272-A-G ***
13488833-G-T 11333157-G-T ***
10756632-T-A ***
22446420-G-A 20284534-G-A DYZ19 ***
10756619-C-A ***
35814-G-T ***
13474661-G-C 11318985-G-C ***
21846545-T-C 19684659-T-C ***
10756608-G-C ***
18914164-GTA-G 16802284-GTA-G 8×TA***
35826-A-C ***
10756603-C-T ***
17064966-G-A 14953086-G-A ***
16643467-T-C 14531587-T-C ***
13808737-A-T 11688031-A-T ***
22914674-CAAAAAAA-C 20752788-CAAAAAAA-C 27×A***
28801512-G-A 26655365-G-A ***
4537586-CTT-C,CT 4669545-CTT-C,CT 21×T***
5430808-CAAAAAA-C 5562767-CAAAAAA-C 25×A***
18547340-T-TA 16435460-T-TA 12×A***
19300724-C-A 17188844-C-A ***
14771126-CTTT-C 12659195-CTTT-C 16×T***
23807578-CAAAA-C 21645692-CAAAA-C 21×A***
8760517-CTT-C,CT 8892476-CTT-C,CT 20×T***
13472168-C-A 11316492-C-A ***
5078146-A-G 5210105-A-G ***
13965269-C-CA 11844563-C-CA 21×A***
10795092-C-CATTGT ***
4197407-G-T 4329366-G-T ***
16265038-GA-G 14153158-GA-G 9×A***
6644597-CT-C,CTT 6776556-CT-C,CTT 15×T***
35807-C-T ***
3391605-C-CAA 3523564-C-CAA 11×A***
13457945-C-G 11302269-C-G ***
13457935-C-G 11302259-C-G ***
11013915-C-A ***
23803208-G-T 21641322-G-T ***
6929132-CTT-C 7061091-CTT-C 26×T***
4956079-C-CT 5088038-C-CT 13×T***
10988012-T-TCCACC ***
10801763-A-ATCCT ***
24416983-G-GA 22270836-G-GA 9×A***
28801502-G-C 26655355-G-C ***
13712717-T-C 11557041-T-C ***
13811164-G-A 11690458-G-A ***
8658542-A-C 8790501-A-C ***
3079722-TAAA-T 3211681-TAAA-T 14×A***
58982398-A-G,T 56836251-A-G,T ***
56832014-A-T ***
6726671-A-G 6858630-A-G ***
23498080-ATTT-A 21336194-ATTT-A 19×T***
10934807-T-A ***
28791290-G-A 26645143-G-A ***
8158141-A-T 8290100-A-T ***
3388906-G-C 3520865-G-C FT317048 ***
10795036-T-C ***
10934811-C-T ***
10939875-A-G ***
56834454-A-ACTCCG ***
10962618-C-A ***
13992191-C-CA 11871485-C-CA 22×A***
6688915-C-CA 6820874-C-CA 8×A***
10839999-T-C FT433581 ***
16539781-G-T 14427901-G-T ***
9321740-C-A 9484131-C-A ***
4336695-ATT-A 4468654-ATT-A 30×T***
13950947-C-CT 11830241-C-CT 23×T***
13252587-CT-C 11096911-CT-C 12×T***
13457955-C-CTACTG 11302279-C-CTACTG ***
7142500-C-A 7274459-C-A ***
7381397-C-CA 7513356-C-CA 11×A***
15128121-CTTT-C 13016208-CTTT-C 18×T***
22747717-CTT-C,CT 20585831-CTT-C,CT 14×T***
3205874-C-A 3337833-C-A 11×A***
17387651-GT-G 15275771-GT-G 10×T***
15151500-C-A 13039587-C-A ***
11019441-T-A,C ***
19511876-AT-A 17399996-AT-A 9×T***
7784370-C-A 7916329-C-A ***
10971954-C-T ***
21082172-C-A 18920286-C-A ***
13474744-A-T 11319068-A-T ***
5084566-G-GT 5216525-G-GT 10×T******
16692117-CAAA-C 14580237-CAAA-C 28×A***
14488263-C-A 12367532-C-A ***
11643674-G-A ***
13454809-C-A 11299133-C-A 4×TCCAT***
2930319-GT-G 3062278-GT-G 26×T***
23377317-C-A 21215431-C-A ***
10657274-C-T ***
10987815-A-G ***
15140641-C-A 13028728-C-A ***
28801435-A-G 26655288-A-G ***
7722918-TAA-T 7854877-TAA-T 11×A***
21064897-G-GA 18903011-G-GA 9×A***
28801425-G-T 26655278-G-T ***
10943410-C-G ***
28801430-G-T 26655283-G-T ***
28801436-T-A 26655289-T-A ***
11013898-C-A ***
19393098-CTT-C 17281218-CTT-C 30×T***
8987646-G-T 9150037-G-T FT99227 ***
11022894-T-C ***
5022164-C-A 5154123-C-A ***
10880970-T-C ***
6631778-C-A 6763737-C-A ***
10754840-C-G ***
10754957-C-A ***
22130328-A-G 19968442-A-G ***
10825276-A-T ***
13481869-C-A 11326193-C-A ***
10956540-ATTGCT-A,ATTGCA ***
16205677-AAT-A 14093797-AAT-A ***
4834245-T-TAAA 4966204-T-TAAA 23×A***
11003732-C-T ***
23061933-C-A 20900047-C-A ***
21549943-C-CT 19388057-C-CT 13×T***
3165009-G-T 3296968-G-T ***
18143936-T-TA 16032056-T-TA ***
18912644-TTC-T 16800764-TTC-T ***
21961720-G-GAA 19799834-G-GAA 12×A***
8842943-T-TA 8974902-T-TA 22×A***
10682551-C-A BY54038 ***
15174674-C-CA 13062760-C-CA 9×A***
10965579-C-T ***
13474693-A-T 11319017-A-T ***
16940238-C-A 14828358-C-A M6416 ***
9859192-CAA-C,CA 10021583-CAA-C,CA 17×A***
14144209-T-C 12023503-T-C ***
10994442-C-T ***
14285833-C-A 12165127-C-A ***
21836738-C-CT 19674852-C-CT 15×T***
14692302-C-A 12580368-C-A ***
16959453-CAA-C 14847573-CAA-C 13×A***
15211235-G-T 13099321-G-T ***
15497349-T-C 13385469-T-C ***
15616166-C-A 13504286-C-A ***
13811127-T-A 11690421-T-A ***
15975111-C-T 13863231-C-T ***
15986672-C-A 13874792-C-A ***
16047925-C-A 13936045-C-A ***
16732961-G-GT,GTT 14621081-G-GT,GTT 14×T***
16740255-C-A 14628375-C-A ***
17167809-C-A 15055929-C-A ***
10885086-C-T ***
10994425-T-A ***
10911765-C-A FT436333 ***
10885141-C-G ***
10801722-C-T ***
7773651-C-A 7905610-C-A ***
9968339-GTTT-G 10130730-GTTT-G 15×T***
19508177-CT-C,CTT 17396297-CT-C,CTT 19×T***
4521612-TAA-T,TAAAA 4653571-TAA-T,TAAAA 17×A***
10937413-T-G ***
4951432-C-A 5083391-C-A ***
4951440-C-A 5083399-C-A ***
13450932-AT-A 11295256-AT-A ***
56834444-ATTCCCTTCCATTCCA-A,ATTCCCTTCCATTCCT ***
6759446-C-A 6891405-C-A ***
13976083-CAAA-C 11855377-CAAA-C 15×A***
13468252-A-G 11312576-A-G ***
7200445-C-A 7332404-C-A ***
16515890-A-AT 14404010-A-AT 10×T***
17187634-CAA-C 15075754-CAA-C 15×A***
6759311-C-A 6891270-C-A ***
9306428-C-A 9468819-C-A ***
9871419-C-A 10033810-C-A ***
15151502-CA-C 13039589-CA-C 23×A***
9854343-CTTT-C 10016734-CTTT-C 19×T***
5631475-G-A 5763434-G-A ***
10793906-C-T ***
14827255-GTT-G 12715322-GTT-G 14×T***
13457948-T-C 11302272-T-C 5×TCCAC***
10776114-T-G ***
10892542-T-C ***
10801682-CA-C ***
24461833-CAATA-C 22315686-CAATA-C 9×AATA***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 370111925924675761107494060
Kit: 3701111482194492905348255753
Used in age calculations1482194492905348255753
Counts of SNPs54
Variant counts last updated 2022-07-30 03:29:56.



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