Burk
BigY2: 124720MDKA Birth: United States > Vermont
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 124720 |
---|---|---|---|---|---|---|---|---|
28817488-C-A | 26671341-C-A | A* | ||||||
6817689-A-G | 6949648-A-G | BY61509 | Y | Y | + | |||
18837170-C-T | 16725290-C-T | BY124231 | Y | Y | + | |||
19006983-T-C | 16895103-T-C | BY125476 | Y | Y | + | |||
24003479-A-T | 21857332-A-T | BY149206 | Y | + | ||||
13856281-T-C | 11735575-T-C | ** | ||||||
20045258-G-A | 17933378-G-A | P5_Prx | ** | |||||
8981974-G-A | 9144365-G-A | Z2148 FGC7811 | ** | |||||
58986103-G-T | 56839956-G-T | ** | ||||||
19600498-A-G | 17488618-A-G | BY176257 | P5_Prx | ** | ||||
27561650-C-A | 25415503-C-A | P1_Y2 | ** | |||||
6312785-CTT-C | 6444744-CTT-C | IR3_Dst | 11×T | ** | ||||
22485246-G-T | 20323360-G-T | BY27283 | DYZ19 | ** | ||||
13811086-A-G | 11690380-A-G | ** | ||||||
16681512-C-G | 14569632-C-G | A17086 | ** | |||||
23137215-C-A | 20975329-C-A | ** | ||||||
10769364-C-A | ** | |||||||
14766597-CT-C | 12654666-CT-C | 8×T | ** | |||||
10988524-C-A | ** | |||||||
10988552-C-T | ** | |||||||
11036234-T-C | ** | |||||||
19950161-G-T | 17838281-G-T | P5_Prx | ** | |||||
16045301-C-A | 13933421-C-A | ** | ||||||
10974760-C-T | ** | |||||||
10764584-C-T | ** | |||||||
13859450-A-G | 11738744-A-G | ** | ||||||
13717526-G-T | 11561850-G-T | ** | ||||||
10987908-C-A | ** | |||||||
15059682-C-A | 12947774-C-A | FT413526 | ** | |||||
10950406-C-T | ** | |||||||
14042699-A-AT | 11921993-A-AT | 9×T | ** | |||||
10811642-G-T | ** | |||||||
10905947-A-T | ** | |||||||
10905958-G-C | ** | |||||||
10905977-G-A | ** | |||||||
10905984-T-A | ** | |||||||
10928854-C-T | ** | |||||||
10905946-G-A | ** | |||||||
20757394-T-G | 18595508-T-G | P4_Prx | ** | |||||
10804461-C-T | ** | |||||||
10995759-T-C | ** | |||||||
17616661-G-T | 15504781-G-T | ** | ||||||
10866262-C-A | ** | |||||||
10905972-T-G | ** | |||||||
10885236-C-T | ** | |||||||
19535745-C-A | 17423865-C-A | ** | ||||||
10821096-G-T | FT432681 | ** | ||||||
10880289-C-G | ** | |||||||
15618942-C-A | 13507062-C-A | ** | ||||||
9571871-TG-T | 9734262-TG-T | IR3_Prx | ** | |||||
13461024-C-T | 11305348-C-T | ** | ||||||
13461045-A-T | 11305369-A-T | ** | ||||||
13846919-C-A | 11726213-C-A | ** | ||||||
4873856-C-A | 5005815-C-A | ** | ||||||
22253209-G-T | 20091323-G-T | DYZ19 | ** | |||||
8575956-ATT-A | 8707915-ATT-A | 28×T | ** | |||||
20943477-C-CTGTG | 18781591-C-CTGTG | P4_Dst | 12×TG | ** | ||||
10828711-C-T | ** | |||||||
10828712-A-G | ** | |||||||
21604084-C-A | 19442198-C-A | FT270603 | ** | |||||
22362021-G-T | 20200135-G-T | DYZ19 | ** | |||||
10827961-A-C | ** | |||||||
28757451-C-A | 26611304-C-A | ** | ||||||
10808854-T-A | ** | |||||||
10756171-G-T | ** | |||||||
5931647-ATT-A | 6063606-ATT-A | 8×T | ** | |||||
4900073-C-A | 5032032-C-A | ** | ||||||
9109610-G-T | ** | |||||||
10961415-C-A | ** | |||||||
10684206-C-T | ** | |||||||
8969526-G-T | 9131917-G-T | ** | ||||||
26075714-G-T | 23929567-G-T | P1_Y1 | ** | |||||
23825064-ATTTTT-A | 21663178-ATTTTT-A | 25×T | ** | |||||
13811101-A-ATTTAG | 11690395-A-ATTTAG | ** | ||||||
10744234-T-TTCTAC | ** | |||||||
10744238-AT-A | ** | |||||||
10885232-A-C | ** | |||||||
14527471-C-A | 12415672-C-A | S16117 | ** | |||||
10995605-C-A | ** | |||||||
10885228-T-A | ** | |||||||
10885261-C-A | ** | |||||||
10974134-C-A | ** | |||||||
15620026-C-A | 13508146-C-A | ** | ||||||
13321599-C-A | 11165923-C-A | ** | ||||||
11031528-C-A | ** | |||||||
10686242-C-A | ** | |||||||
13870565-C-A | 11749859-C-A | ** | ||||||
7199965-C-A | 7331924-C-A | ** | ||||||
13856269-A-T | 11735563-A-T | ** | ||||||
10885229-T-TG | ** | |||||||
10827943-T-C | ** | |||||||
14379149-C-A | 12258445-C-A | ** | ||||||
28819286-G-T | 26673139-G-T | ** | ||||||
20217998-G-T | 18056112-G-T | P5_Dst | ** | |||||
11036236-T-A | ** | |||||||
7109487-C-A | 7241446-C-A | ** | ||||||
10793007-T-C | ** | |||||||
16179575-C-A | 14067695-C-A | ** | ||||||
10994779-A-C | ** | |||||||
11648440-G-T | ** | |||||||
10756203-A-T | ** | |||||||
10756224-G-C | ** | |||||||
14339226-C-A | 12218521-C-A | ** | ||||||
10994721-T-C | ** | |||||||
18577081-C-A | 16465201-C-A | ** | ||||||
8976437-G-T | 9138828-G-T | ** | ||||||
24585691-A-AC | 22439544-A-AC | P3_t2 | ** | |||||
6770859-T-C | 6902818-T-C | ** | ||||||
6770860-G-A | 6902819-G-A | ** | ||||||
17146499-C-A | 15034619-C-A | ** | ||||||
13811079-G-T | 11690373-G-T | ** | ||||||
23096975-G-T | 20935089-G-T | ** | ||||||
13695486-G-C | 11539810-G-C | ** | ||||||
10999834-T-C | ** | |||||||
15732866-C-A | 13620986-C-A | ** | ||||||
10870802-C-A | ** | |||||||
16868709-C-A | 14756829-C-A | ** | ||||||
7163012-G-T | 7294971-G-T | ** | ||||||
7409545-C-A | 7541504-C-A | ** | ||||||
16029653-C-A | 13917773-C-A | ** | ||||||
8501689-CTCTTCTTCTTCTTCT-C | 8633648-CTCTTCTTCTTCTTCT-C | 18×TCT | ** | |||||
10955888-G-T | ** | |||||||
28798448-A-G | 26652301-A-G | ** | ||||||
11004175-C-A | ** | |||||||
13234403-C-A | 11078727-C-A | ** | ||||||
19044305-C-A | 16932425-C-A | ** | ||||||
3057187-C-A | 3189146-C-A | ** | ||||||
10994716-A-T | ** | |||||||
7307624-G-A | 7439583-G-A | BY66411 | FT19118 | ** | ||||
18925270-C-A | 16813390-C-A | ** | ||||||
15732916-C-A | 13621036-C-A | ** | ||||||
16345122-C-A | 14233242-C-A | ** | ||||||
14379147-C-A | 12258443-C-A | ** | ||||||
22809589-C-A | 20647703-C-A | FT218269 | ** | |||||
17381340-C-A | 15269460-C-A | ** | ||||||
10756207-C-T | ** | |||||||
16707834-G-T | 14595954-G-T | ** | ||||||
10792269-C-A | ** | |||||||
10023797-C-A | 10186188-C-A | ** | ||||||
8061767-C-A | 8193726-C-A | ** | ||||||
13856301-T-TGGAAA | 11735595-T-TGGAAA | ** | ||||||
14067262-G-A | 11946556-G-A | ** | ||||||
10885219-T-A | ** | |||||||
10984923-C-A | ** | |||||||
10814230-G-T | ** | |||||||
14537661-C-A | 12425862-C-A | ** | ||||||
13714490-G-T | 11558814-G-T | ** | ||||||
21934603-T-G | 19772717-T-G | ** | ||||||
21211932-C-A | 19050046-C-A | ** | ||||||
13698699-C-A | 11543023-C-A | ** | ||||||
8100476-A-C | 8232435-A-C | ** | ||||||
10822042-C-A | ** | |||||||
10909513-A-C | ** | |||||||
10909515-T-C | ** | |||||||
11648362-C-A | ** | |||||||
11648375-G-C | ** | |||||||
11648379-T-A | ** | |||||||
11648383-C-T | ** | |||||||
11648404-T-G | FTA51561 | ** | ||||||
11648405-A-C | ** | |||||||
11648408-C-T | ** | |||||||
23954239-C-A | 21808092-C-A | ** | ||||||
16228010-A-C | 14116130-A-C | ** | ||||||
10974767-C-A | ** | |||||||
3804566-C-A | 3936525-C-A | ** | ||||||
10683693-T-C | ** | |||||||
7162979-C-A | 7294938-C-A | ** | ||||||
14667993-C-A | 12556059-C-A | ** | ||||||
22520624-TA-T | 20358738-TA-T | ** | ||||||
22520635-G-A | 20358749-G-A | ** | ||||||
16091143-G-T | 13979263-G-T | ** | ||||||
15905919-C-A | 13794039-C-A | ** | ||||||
22100835-T-G | 19938949-T-G | ** | ||||||
16989970-C-A | 14878090-C-A | ** | ||||||
11648368-T-A | ** | |||||||
11648370-G-A | ** | |||||||
18923365-G-T | 16811485-G-T | ** | ||||||
9306671-C-A | 9469062-C-A | ** | ||||||
15276839-C-A | 13164928-C-A | ** | ||||||
11021537-TATTAC-T | ** | |||||||
15059736-C-A | 12947828-C-A | ** | ||||||
22010316-C-A | 19848430-C-A | ** | ||||||
15430379-T-C | 13318499-T-C | ** | ||||||
28492384-C-A | 26346237-C-A | ** | ||||||
28609355-CT-C | 26463208-CT-C | 8×T | ** | |||||
10991228-T-TCTGC | ** | |||||||
10991230-C-CT | ** | |||||||
3437019-G-T | 3568978-G-T | ** | ||||||
11019841-C-A | ** | |||||||
2778472-A-T | 2910431-A-T | ** | ||||||
2790897-A-C | 2922856-A-C | ** | ||||||
3011647-T-C | 3143606-T-C | ** | ||||||
3055889-C-A | 3187848-C-A | ** | ||||||
3093203-C-A | 3225162-C-A | ** | ||||||
3165071-T-C | 3297030-T-C | ** | ||||||
3250103-T-G | 3382062-T-G | ** | ||||||
3250795-G-A | 3382754-G-A | ** | ||||||
3252954-A-G | 3384913-A-G | ** | ||||||
3378851-C-CAAA | 3510810-C-CAAA | 13×A | ** | |||||
3436393-A-G | 3568352-A-G | ** | ||||||
3500473-C-A | 3632432-C-A | ** | ||||||
3696347-G-A | 3828306-G-A | ** | ||||||
3896596-T-C | 4028555-T-C | ** | ||||||
3932127-C-A | 4064086-C-A | ** | ||||||
4142337-G-T | 4274296-G-T | ** | ||||||
4156602-C-A | 4288561-C-A | ** | ||||||
4207073-C-A | 4339032-C-A | ** | ||||||
4215843-G-T | 4347802-G-T | ** | ||||||
4293835-G-T | 4425794-G-T | ** | ||||||
4339997-CT-C | 4471956-CT-C | ** | ||||||
4357914-G-T | 4489873-G-T | ** | ||||||
4401217-T-C | 4533176-T-C | ** | ||||||
4464826-C-A | 4596785-C-A | ** | ||||||
4626067-C-T | 4758026-C-T | ** | ||||||
4708624-G-T | 4840583-G-T | ** | ||||||
4900119-T-A | 5032078-T-A | ** | ||||||
4925413-C-A | 5057372-C-A | ** | ||||||
4951863-C-A | 5083822-C-A | ** | ||||||
4961164-G-T | 5093123-G-T | 9×A | ** | |||||
5060217-C-A | 5192176-C-A | ** | ||||||
5226074-T-G | 5358033-T-G | ** | ||||||
5534684-C-T | 5666643-C-T | ** | ||||||
5661622-C-A | 5793581-C-A | ** | ||||||
5758336-G-T | 5890295-G-T | ** | ||||||
5812152-C-T | 5944111-C-T | ** | ||||||
5844516-T-G | 5976475-T-G | ** | ||||||
5844536-C-G | 5976495-C-G | ** | ||||||
5870086-C-G | 6002045-C-G | ** | ||||||
6119583-T-C | 6251542-T-C | ** | ||||||
6146642-T-C | 6278601-T-C | IR3_Dst | ** | |||||
6173193-C-T | 6305152-C-T | IR3_Dst | ** | |||||
6648335-C-A | 6780294-C-A | ** | ||||||
6648410-C-A | 6780369-C-A | ** | ||||||
6713117-C-A | 6845076-C-A | ** | ||||||
6730544-G-A | 6862503-G-A | ** | ||||||
6790637-G-T | 6922596-G-T | ** | ||||||
6791251-G-T | 6923210-G-T | ** | ||||||
6831959-C-A | 6963918-C-A | ** | ||||||
6892741-TCCCA-T | 7024700-TCCCA-T | ** | ||||||
6928381-C-A | 7060340-C-A | 10×T | ** | |||||
6934739-C-A | 7066698-C-A | ** | ||||||
6948345-C-T | 7080304-C-T | ** | ||||||
7142257-C-G | 7274216-C-G | ** | ||||||
7154821-A-C | 7286780-A-C | ** | ||||||
7163003-G-T | 7294962-G-T | ** | ||||||
7163020-G-T | 7294979-G-T | ** | ||||||
7163021-G-T | 7294980-G-T | ** | ||||||
7163023-G-T | 7294982-G-T | ** | ||||||
7199976-C-T | 7331935-C-T | ** | ||||||
7383850-TC-T | 7515809-TC-T | ** | ||||||
7459167-C-A | 7591126-C-A | IR1_L | ** | |||||
7459181-C-A | 7591140-C-A | IR1_L | ** | |||||
7459183-C-A | 7591142-C-A | IR1_L | ** | |||||
7459197-A-G | 7591156-A-G | IR1_L | ** | |||||
7459209-T-G | 7591168-T-G | IR1_L | ** | |||||
7459224-A-C | 7591183-A-C | IR1_L | ** | |||||
7459226-T-C | 7591185-T-C | IR1_L | ** | |||||
7459237-G-C | 7591196-G-C | IR1_L | ** | |||||
7459241-A-C | 7591200-A-C | IR1_L | ** | |||||
7459245-T-C | 7591204-T-C | IR1_L | ** | |||||
7638822-G-C | 7770781-G-C | FT143523 | ** | |||||
7708884-G-T | 7840843-G-T | ** | ||||||
7784466-C-A | 7916425-C-A | ** | ||||||
7918527-C-A | 8050486-C-A | ** | ||||||
7939433-A-C | 8071392-A-C | ** | ||||||
8061720-G-T | 8193679-G-T | ** | ||||||
8061778-T-C | 8193737-T-C | ** | ||||||
8153638-T-A | 8285597-T-A | ** | ||||||
8290185-C-A | 8422144-C-A | ** | ||||||
8686303-C-A | 8818262-C-A | ** | ||||||
8851812-G-T | 8983771-G-T | ** | ||||||
9109637-G-T | ** | |||||||
9015819-C-A | 9178210-C-A | ** | ||||||
9908388-C-A | 10070779-C-A | ** | ||||||
9926770-C-A | 10089161-C-A | ** | ||||||
9952484-C-A | 10114875-C-A | ** | ||||||
9964176-G-C | 10126567-G-C | ** | ||||||
9964217-A-C | 10126608-A-C | ** | ||||||
10651949-A-C | ** | |||||||
10652398-A-C | ** | |||||||
10684213-C-T | ** | |||||||
10684242-T-A | ** | |||||||
10686477-C-A | ** | |||||||
10689791-A-T | ** | |||||||
10750158-T-C | ** | |||||||
10755067-C-A | ** | |||||||
10757877-G-T | ** | |||||||
10782401-C-A | ** | |||||||
10788353-G-T | ** | |||||||
10817797-T-G | ** | |||||||
10837444-C-A | ** | |||||||
10838745-G-T | ** | |||||||
10838771-C-T | ** | |||||||
10841027-C-T | ** | |||||||
10845013-C-T | ** | |||||||
10847292-C-G | ** | |||||||
10866271-C-A | ** | |||||||
10866282-C-A | ** | |||||||
10866286-C-A | ** | |||||||
10866304-T-G | ** | |||||||
10866331-C-A | ** | |||||||
10867979-TCATTCCATTCCATTC-T | ** | |||||||
10868094-C-A | ** | |||||||
10878157-C-T | ** | |||||||
10878689-C-A | ** | |||||||
10893700-C-A | ** | |||||||
10924872-C-A | ** | |||||||
10933646-CT-C | ** | |||||||
10937554-C-A | ** | |||||||
10937627-C-A | ** | |||||||
10941486-C-A | ** | |||||||
10944414-C-A | ** | |||||||
10952604-C-A | ** | |||||||
10964917-G-A | ** | |||||||
10972740-G-T | ** | |||||||
10984925-G-T | ** | |||||||
10985277-T-C | ** | |||||||
10994706-T-G | ** | |||||||
10994724-A-T | ** | |||||||
10994741-C-G | ** | |||||||
10994754-C-G | ** | |||||||
10994765-A-G | ** | |||||||
10994785-A-C | ** | |||||||
10994788-G-T | ** | |||||||
10997839-C-A | ** | |||||||
11000932-G-A | ** | |||||||
11011283-T-C | ** | |||||||
11020080-C-T | ** | |||||||
13196030-T-C | 11040354-T-C | ** | ||||||
13340421-T-G | 11184745-T-G | ** | ||||||
13405898-T-C | 11250222-T-C | ** | ||||||
13695472-G-T | 11539796-G-T | ** | ||||||
13695473-A-C | 11539797-A-C | ** | ||||||
13695576-G-T | 11539900-G-T | ** | ||||||
13698718-A-T | 11543042-A-T | ** | ||||||
13714485-C-T | 11558809-C-T | ** | ||||||
13714489-T-A | 11558813-T-A | ** | ||||||
11651852-A-G | FT450268 | ** | ||||||
11669727-A-C | ** | |||||||
11676516-G-T | ** | |||||||
13865986-AATGGAATGGAATG-A | 11745280-AATGGAATGGAATG-A | ** | ||||||
13866160-G-C | 11745454-G-C | ** | ||||||
13896242-C-T | 11775536-C-T | ** | ||||||
13927438-G-A | 11806732-G-A | ** | ||||||
13927455-A-G | 11806749-A-G | ** | ||||||
14000503-T-A | 11879797-T-A | ** | ||||||
14000507-C-A | 11879801-C-A | ** | ||||||
14046643-C-A | 11925937-C-A | FT96395 | ** | |||||
14139717-C-A | 12019011-C-A | FT126649 | ** | |||||
14311962-C-T | 12191256-C-T | ** | ||||||
14361576-C-A | 12240871-C-A | ** | ||||||
14364135-G-A | 12243430-G-A | ** | ||||||
14401991-C-A | 12281288-C-A | ** | ||||||
14416644-G-A | 12295941-G-A | ** | ||||||
14451747-T-G | 12331020-T-G | ** | ||||||
14568226-A-T | 12456426-A-T | ** | ||||||
14605127-A-C | 12493329-A-C | ** | ||||||
14789452-G-T | 12677523-G-T | ** | ||||||
14825983-G-T | 12714050-G-T | BY97810 | ** | |||||
14844614-T-G | 12732680-T-G | ** | ||||||
15012817-C-A | 12900905-C-A | ** | ||||||
15045717-C-A | 12933807-C-A | ** | ||||||
15106935-G-T | 12995022-G-T | ** | ||||||
15178398-C-G | 13066484-C-G | ** | ||||||
15178402-C-A | 13066488-C-A | ** | ||||||
15198831-C-A | 13086917-C-A | ** | ||||||
15201361-G-T | 13089447-G-T | ** | ||||||
15219096-C-A | 13107182-C-A | ** | ||||||
15439167-T-C | 13327287-T-C | ** | ||||||
15470837-AT-A | 13358957-AT-A | ** | ||||||
15749527-A-G | 13637647-A-G | ** | ||||||
15760683-G-T | 13648803-G-T | ** | ||||||
15975297-A-G | 13863417-A-G | ** | ||||||
16121825-A-G | 14009945-A-G | P8_Prx | ** | |||||
16184386-C-G | 14072506-C-G | ** | ||||||
16288755-A-C | 14176875-A-C | ** | ||||||
16288759-A-C | 14176879-A-C | ** | ||||||
16321747-C-A | 14209867-C-A | ** | ||||||
16399951-T-G | 14288071-T-G | ** | ||||||
16526661-C-G | 14414781-C-G | ** | ||||||
16544561-G-T | 14432681-G-T | FT143928 | ** | |||||
17071351-G-T | 14959471-G-T | ** | ||||||
17071379-G-T | 14959499-G-T | ** | ||||||
17130037-A-C | 15018157-A-C | ** | ||||||
17326778-G-A | 15214898-G-A | ** | ||||||
17355499-C-A | 15243619-C-A | ** | ||||||
17616652-C-A | 15504772-C-A | ** | ||||||
17794306-C-A | 15682426-C-A | ** | ||||||
17897960-A-C | 15786080-A-C | ** | ||||||
17913612-C-T | 15801732-C-T | ** | ||||||
17994884-A-AAC | 15883004-A-AAC | P7_Prx | ** | |||||
17994913-AGAT-A | 15883033-AGAT-A | P7_Prx | ** | |||||
18060245-C-A | 15948365-C-A | ** | ||||||
18135765-C-T | 16023885-C-T | ** | ||||||
18197894-C-A | 16086014-C-A | ** | ||||||
18541457-C-A | 16429577-C-A | ** | ||||||
18554321-T-G | 16442441-T-G | ** | ||||||
18794942-C-A | 16683062-C-A | ** | ||||||
18948282-A-G | 16836402-A-G | ** | ||||||
18956054-G-T | 16844174-G-T | ** | ||||||
19079016-A-G | 16967136-A-G | ** | ||||||
19216495-T-A | 17104615-T-A | ** | ||||||
19251469-A-C | 17139589-A-C | ** | ||||||
19253040-G-T | 17141160-G-T | ** | ||||||
19463727-G-C | 17351847-G-C | ** | ||||||
19600524-T-TGG | 17488644-T-TGG | P5_Prx | ** | |||||
19631408-C-A | 17519528-C-A | P5_Prx | ** | |||||
19749332-G-T | 17637452-G-T | P5_Prx | ** | |||||
20352429-G-T | 18190543-G-T | P5_Dst | ** | |||||
20461550-C-A | 18299664-C-A | P5_Dst | ** | |||||
20637953-A-C | 18476067-A-C | P4_Prx | ** | |||||
20675758-G-T | 18513872-G-T | P4_Prx | ** | |||||
20865357-CA-C | 18703471-CA-C | P4_Dst | ** | |||||
20941180-C-A | 18779294-C-A | P4_Dst | ** | |||||
21182414-T-TG | 19020528-T-TG | ** | ||||||
21220853-C-A | 19058967-C-A | ** | ||||||
21244184-T-A | 19082298-T-A | ** | ||||||
21276536-C-A | 19114650-C-A | ** | ||||||
21353324-C-A | 19191438-C-A | ** | ||||||
21444586-C-A | 19282700-C-A | ** | ||||||
21665555-T-A | 19503669-T-A | ** | ||||||
22010303-A-C | 19848417-A-C | ** | ||||||
22060436-A-C | 19898550-A-C | ** | ||||||
22170265-G-A | 20008379-G-A | ** | ||||||
22253212-G-A | 20091326-G-A | DYZ19 | ** | |||||
22264301-T-A | 20102415-T-A | DYZ19 | ** | |||||
22435615-A-C | 20273729-A-C | DYZ19 | ** | |||||
22592088-A-T | 20430202-A-T | ** | ||||||
22836621-C-G | 20674735-C-G | ** | ||||||
22857193-T-C | 20695307-T-C | ** | ||||||
22971823-C-A | 20809937-C-A | ** | ||||||
22993384-A-G | 20831498-A-G | ** | ||||||
23096980-G-T | 20935094-G-T | ** | ||||||
23097027-T-A | 20935141-T-A | ** | ||||||
23401174-A-T | 21239288-A-T | ** | ||||||
24107689-C-A | 21961542-C-A | P3_b1 | ** | |||||
24276079-C-A | 22129932-C-A | P3_b1 | ** | |||||
24276140-G-T | 22129993-G-T | P3_b1 | ** | |||||
24373242-C-T | 22227095-C-T | FGC3671 | ** | |||||
24886629-T-G | 22740482-T-G | g1 | ** | |||||
25356673-G-T | 23210526-G-T | P2_r2 | ** | |||||
25720218-A-G | 23574071-A-G | P1_b3 | ** | |||||
26010341-T-G | 23864194-T-G | P1_Y1 | ** | |||||
26010351-A-AG | 23864204-A-AG | P1_Y1 | ** | |||||
26010354-GT-G | 23864207-GT-G | P1_Y1 | ** | |||||
26010365-G-C | 23864218-G-C | P1_Y1 | ** | |||||
26010471-A-C | 23864324-A-C | P1_Y1 | ** | |||||
26141314-C-T | 23995167-C-T | P1_Y1 | ** | |||||
26153983-T-G | 24007836-T-G | P1_Y1 | ** | |||||
26170536-A-G | 24024389-A-G | P1_Y1 | ** | |||||
26170543-G-C | 24024396-G-C | P1_Y1 | ** | |||||
26170556-A-T | 24024409-A-T | P1_Y1 | ** | |||||
26467223-C-A | 24321076-C-A | P1_Y1 | ** | |||||
26505465-A-G | 24359318-A-G | P1_Y1 | ** | |||||
26517058-T-G | 24370911-T-G | P1_Y1 | ** | |||||
26722011-C-A | 24575864-C-A | P1_g2 | ** | |||||
28236799-C-A | 26090652-C-A | P1_b4 | ** | |||||
28459084-G-T | 26312937-G-T | ** | ||||||
28575562-C-T | 26429415-C-T | ** | ||||||
28596936-C-T | 26450789-C-T | FT303103 | ** | |||||
28653247-G-A | 26507100-G-A | ** | ||||||
28653259-C-T | 26507112-C-T | ** | ||||||
28759699-C-A | 26613552-C-A | ** | ||||||
28812335-G-T | 26666188-G-T | ** | ||||||
28812345-G-A | 26666198-G-A | ** | ||||||
28819301-G-C | 26673154-G-C | ** | ||||||
28819302-A-T | 26673155-A-T | ** | ||||||
56728191-T-A | ** | |||||||
56841525-A-G | ** | |||||||
56846016-C-A | ** | |||||||
56851097-G-T | ** | |||||||
14795-G-T | ** | |||||||
58981315-C-T | 56835168-C-T | *** | ||||||
8558485-G-GT | 8690444-G-GT | 9×T | *** | |||||
15108916-CTT-C,CT | 12997003-CTT-C,CT | 15×T | *** | |||||
10986907-T-A,C | *** | |||||||
10956591-T-C | *** | |||||||
10690849-T-A | *** | |||||||
10690854-T-A | *** | |||||||
10690858-TA-T | *** | |||||||
10988565-C-T | *** | |||||||
8217854-C-A | 8349813-C-A | *** | ||||||
11012275-T-C | *** | |||||||
10657273-TCCATTC-T | *** | |||||||
11675605-C-A | *** | |||||||
10844239-A-T | *** | |||||||
11004427-T-C | *** | |||||||
10969290-C-T | *** | |||||||
10935631-C-T | *** | |||||||
10758041-A-G | *** | |||||||
10971961-C-A | *** | |||||||
7938161-GA-G,GAA | 8070120-GA-G,GAA | 15×A | *** | |||||
5081007-C-A | 5212966-C-A | *** | ||||||
22594657-C-A | 20432771-C-A | *** | ||||||
23419656-CT-C | 21257770-CT-C | *** | ||||||
15192661-C-A | 13080747-C-A | *** | ||||||
18926968-C-A | 16815088-C-A | *** | ||||||
6619794-C-A | 6751753-C-A | *** | ||||||
21639085-C-A | 19477199-C-A | *** | ||||||
13811132-T-C | 11690426-T-C | *** | ||||||
13811137-T-C | 11690431-T-C | *** | ||||||
10776015-C-T | *** | |||||||
10662177-C-A | *** | |||||||
8525361-C-A | 8657320-C-A | *** | ||||||
15257262-CA-C,CAA | 13145346-CA-C,CAA | 14×A | *** | |||||
14764800-C-A | 12652869-C-A | *** | ||||||
22295305-G-T | 20133419-G-T | DYZ19 | *** | |||||
18900535-C-A | 16788655-C-A | *** | ||||||
56834613-C-A | *** | |||||||
13880921-C-A | 11760215-C-A | *** | ||||||
15818411-CT-C | 13706531-CT-C | 8×T | *** | |||||
10764604-C-G | *** | |||||||
4243104-C-A | 4375063-C-A | *** | ||||||
6012895-C-A | 6144854-C-A | *** | ||||||
8155857-C-T | 8287816-C-T | *** | ||||||
8706110-A-G | 8838069-A-G | *** | ||||||
10661026-C-A | *** | |||||||
10678290-T-TCCACTCCATTGCATTCCATC | *** | |||||||
10979592-C-A | *** | |||||||
10987556-C-A | *** | |||||||
10987673-C-A | *** | |||||||
13513082-C-T | 11357406-C-T | *** | ||||||
13612470-A-G | 11456794-A-G | *** | ||||||
13690802-G-T | 11535126-G-T | *** | ||||||
11643681-A-ATACATCCGGT | *** | |||||||
11649533-G-T | *** | |||||||
13909372-G-T | 11788666-G-T | *** | ||||||
14356890-CTT-C,CTTT | 12236185-CTT-C,CTTT | 17×T | *** | |||||
15262410-C-A | 13150494-C-A | *** | ||||||
15600215-A-G | 13488335-A-G | *** | ||||||
17048010-C-A | 14936130-C-A | *** | ||||||
17279426-G-T | 15167546-G-T | *** | ||||||
17490408-C-A | 15378528-C-A | *** | ||||||
18616541-C-A | 16504661-C-A | *** | ||||||
22068827-A-G | 19906941-A-G | *** | ||||||
23368589-C-A | 21206703-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.