Schroeder
BigY2: 181317Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 181317 |
---|---|---|---|---|---|---|---|
hg19:Y:22224323-A-G hg38:Y:20062437-A-G | DYZ19 | A* | |||||
hg19:Y:6105798-C-G hg38:Y:6237757-C-G | A* | ||||||
hg19:Y:6185009-C-CT hg38:Y:6316968-C-CT | IR3_Dst | A* | |||||
hg19:Y:13451251-C-T hg38:Y:11295575-C-T | A* | ||||||
hg19:Y:13687903-A-G hg38:Y:11532227-A-G | DYZ17 | A* | |||||
hg19:Y:20048737-C-G hg38:Y:17936857-C-G | P5_Prx | A* | |||||
hg19:Y:22308269-G-C hg38:Y:20146383-G-C | DYZ19 | A* | |||||
hg19:Y:19284204-C-A hg38:Y:17172324-C-A | BY127950 | Y | Y | + | |||
hg19:Y:16782570-C-T hg38:Y:14670690-C-T | FGC59359 | FGC59375 | Y | Y | + | ||
hg19:Y:4271129-CA-C hg38:Y:4403088-CA-C | + | ||||||
hg19:Y:8305713-T-G hg38:Y:8437672-T-G | BY71549 | Y | Y | + | |||
hg19:Y:8464481-A-G hg38:Y:8596440-A-G | BY73014 | Y | Y | + | |||
hg19:Y:15349991-C-G hg38:Y:13238110-C-G | BY101028 | Y | Y | + | |||
hg19:Y:16782710-A-C hg38:Y:14670830-A-C | BY110085 | Y | Y | + | |||
hg19:Y:17287602-A-T hg38:Y:15175722-A-T | BY113506 | Y | Y | + | |||
hg19:Y:21436118-T-C hg38:Y:19274232-T-C | BY132905 | Y | Y | + | |||
hg19:Y:21768758-G-A hg38:Y:19606872-G-A | BY55292 | Y | Y | + | |||
hg19:Y:22893773-T-C hg38:Y:20731887-T-C | BY141470 | Y | Y | + | |||
hg19:Y:22334841-G-C hg38:Y:20172955-G-C | DYZ19 | * | |||||
hg19:Y:24242429-A-C hg38:Y:22096282-A-C | FT460894 | P3_b1 | 10×AC | * | |||
hg19:Y:8568465-G-T hg38:Y:8700424-G-T | BY48367 | 22×T | ** | ||||
hg19:Y:9134676-G-C hg38:Y:9297067-G-C | PF5126 Z1847 | ** | |||||
hg19:Y:17513929-A-G hg38:Y:15402049-A-G | M423 | CTS7510 Z2597 AM01273 | ** | ||||
hg19:Y:17848836-T-C hg38:Y:15736956-T-C | Y27361 | ** | |||||
hg19:Y:22478621-C-T hg38:Y:20316735-C-T | BY171811 | DYZ19 | ** | ||||
hg19:Y:7217294-G-T hg38:Y:7349253-G-T | ** | ||||||
hg19:Y:9194023-C-G hg38:Y:9356414-C-G | ** | ||||||
hg19:Y:16223540-C-A hg38:Y:14111660-C-A | Y69470 | ** | |||||
hg19:Y:58997283-G-A hg38:Y:56851136-G-A | ** | ||||||
hg38:Y:10954703-A-C | ** | ||||||
hg19:Y:9509322-G-T hg38:Y:9671713-G-T | ** | ||||||
hg38:Y:10866087-A-T | ** | ||||||
hg19:Y:21809809-T-TTTATTA hg38:Y:19647923-T-TTTATTA | 12×TTA | ** | |||||
hg19:Y:23279422-C-A hg38:Y:21117536-C-A | ** | ||||||
hg19:Y:14326577-A-C hg38:Y:12205871-A-C | ** | ||||||
hg19:Y:21691831-C-A hg38:Y:19529945-C-A | ** | ||||||
hg19:Y:14032642-C-CAA hg38:Y:11911936-C-CAA | 14×A | ** | |||||
hg38:Y:11646183-G-T | DYZ17 | ** | |||||
hg38:Y:10958993-T-C | FT219246 | ** | |||||
hg19:Y:16075374-C-A hg38:Y:13963494-C-A | ** | ||||||
hg19:Y:21912175-C-A hg38:Y:19750289-C-A | ** | ||||||
hg19:Y:6298491-AC-A hg38:Y:6430450-AC-A | IR3_Dst | ** | |||||
hg38:Y:10796158-A-T | ** | ||||||
hg19:Y:19622199-C-A hg38:Y:17510319-C-A | P5_Prx | ** | |||||
hg19:Y:13898634-G-T hg38:Y:11777928-G-T | ** | ||||||
hg19:Y:9116840-G-T hg38:Y:9279231-G-T | ** | ||||||
hg38:Y:10764562-T-A | ** | ||||||
hg19:Y:28629021-AT-A hg38:Y:26482874-AT-A | 9×T | ** | |||||
hg38:Y:10674004-C-A | ** | ||||||
hg19:Y:14343901-C-A hg38:Y:12223196-C-A | ** | ||||||
hg19:Y:7131370-A-C hg38:Y:7263329-A-C | ** | ||||||
hg19:Y:13480906-C-A hg38:Y:11325230-C-A | ** | ||||||
hg19:Y:17187438-C-A hg38:Y:15075558-C-A | ** | ||||||
hg19:Y:6776299-C-A hg38:Y:6908258-C-A | ** | ||||||
hg38:Y:10955303-C-T | ** | ||||||
hg19:Y:19187587-C-T hg38:Y:17075707-C-T | ** | ||||||
hg19:Y:21623832-TTTTTTG-T hg38:Y:19461946-TTTTTTG-T | ** | ||||||
hg19:Y:15650664-C-A hg38:Y:13538784-C-A | ** | ||||||
hg38:Y:10829588-A-C | ** | ||||||
hg38:Y:10692526-C-G | ** | ||||||
hg19:Y:5220969-C-A hg38:Y:5352928-C-A | ** | ||||||
hg19:Y:3991810-C-A hg38:Y:4123769-C-A | ** | ||||||
hg19:Y:17428220-T-A hg38:Y:15316340-T-A | ** | ||||||
hg19:Y:3804456-C-A hg38:Y:3936415-C-A | ** | ||||||
hg19:Y:28791395-C-A hg38:Y:26645248-C-A | ** | ||||||
hg38:Y:11036182-C-A | ** | ||||||
hg38:Y:10652690-GTCCAC-G | ** | ||||||
hg38:Y:10876505-G-T | ** | ||||||
hg19:Y:4444796-G-T hg38:Y:4576755-G-T | ** | ||||||
hg19:Y:17224468-C-A hg38:Y:15112588-C-A | ** | ||||||
hg19:Y:24458758-C-A hg38:Y:22312611-C-A | ** | ||||||
hg19:Y:8719325-C-A hg38:Y:8851284-C-A | ** | ||||||
hg19:Y:6831297-C-A hg38:Y:6963256-C-A | ** | ||||||
hg19:Y:27856435-G-T hg38:Y:25710288-G-T | P1_Y2 | ** | |||||
hg19:Y:22639268-T-G hg38:Y:20477382-T-G | ** | ||||||
hg19:Y:10024369-C-A hg38:Y:10186760-C-A | ** | ||||||
hg19:Y:7294462-C-A hg38:Y:7426421-C-A | ** | ||||||
hg38:Y:10947287-C-G | ** | ||||||
hg38:Y:10939614-T-G | ** | ||||||
hg19:Y:7158094-C-A hg38:Y:7290053-C-A | ** | ||||||
hg19:Y:6642296-C-A hg38:Y:6774255-C-A | ** | ||||||
hg38:Y:11010386-T-A | ** | ||||||
hg19:Y:9852715-C-A hg38:Y:10015106-C-A | 12×A | ** | |||||
hg19:Y:13962084-C-A hg38:Y:11841378-C-A | ** | ||||||
hg38:Y:56823124-G-T | ** | ||||||
hg19:Y:17117454-C-A hg38:Y:15005574-C-A | ** | ||||||
hg38:Y:10859272-C-A | ** | ||||||
hg19:Y:23808679-G-T hg38:Y:21646793-G-T | ** | ||||||
hg19:Y:4049524-C-A hg38:Y:4181483-C-A | ** | ||||||
hg19:Y:15928408-C-A hg38:Y:13816528-C-A | ** | ||||||
hg19:Y:3251814-C-A hg38:Y:3383773-C-A | ** | ||||||
hg38:Y:10782424-C-A | ** | ||||||
hg38:Y:10782426-C-T | ** | ||||||
hg38:Y:10782430-T-A | ** | ||||||
hg38:Y:10782431-T-C | ** | ||||||
hg19:Y:15106700-G-A hg38:Y:12994788-G-A | ** | ||||||
hg19:Y:16417528-C-A hg38:Y:14305648-C-A | ** | ||||||
hg19:Y:28545721-A-C hg38:Y:26399574-A-C | ** | ||||||
hg38:Y:11031413-TTCCAC-T | ** | ||||||
hg38:Y:10982459-T-A | ** | ||||||
hg19:Y:16860816-G-A hg38:Y:14748936-G-A | FT23045 | ** | |||||
hg19:Y:19187612-G-A hg38:Y:17075732-G-A | ** | ||||||
hg19:Y:28566852-C-A hg38:Y:26420705-C-A | ** | ||||||
hg38:Y:10963260-C-T | ** | ||||||
hg38:Y:10793775-C-A | ** | ||||||
hg38:Y:10851756-G-T | ** | ||||||
hg38:Y:56854893-G-T | ** | ||||||
hg19:Y:7040317-G-T hg38:Y:7172276-G-T | ** | ||||||
hg19:Y:17475157-G-T hg38:Y:15363277-G-T | ** | ||||||
hg38:Y:10900639-C-A | ** | ||||||
hg19:Y:13718538-A-G hg38:Y:11562862-A-G | DYZ17 | ** | |||||
hg38:Y:11019173-C-A | ** | ||||||
hg19:Y:17347548-C-A hg38:Y:15235668-C-A | ** | ||||||
hg19:Y:13874781-C-A hg38:Y:11754075-C-A | ** | ||||||
hg19:Y:21371175-C-A hg38:Y:19209289-C-A | ** | ||||||
hg19:Y:2773532-G-T hg38:Y:2905491-G-T | ** | ||||||
hg38:Y:10945250-C-G | ** | ||||||
hg19:Y:27647686-C-A hg38:Y:25501539-C-A | P1_Y2 | ** | |||||
hg19:Y:13263124-G-T hg38:Y:11107448-G-T | ** | ||||||
hg19:Y:3010540-C-A hg38:Y:3142499-C-A | ** | ||||||
hg19:Y:3058766-G-T hg38:Y:3190725-G-T | ** | ||||||
hg19:Y:3140797-C-A hg38:Y:3272756-C-A | ** | ||||||
hg19:Y:3200616-C-A hg38:Y:3332575-C-A | ** | ||||||
hg19:Y:3202989-G-T hg38:Y:3334948-G-T | ** | ||||||
hg19:Y:3330928-C-A hg38:Y:3462887-C-A | ** | ||||||
hg19:Y:3348506-C-A hg38:Y:3480465-C-A | ** | ||||||
hg19:Y:3393585-C-A hg38:Y:3525544-C-A | ** | ||||||
hg19:Y:3407315-C-A hg38:Y:3539274-C-A | ** | ||||||
hg19:Y:3477765-G-C hg38:Y:3609724-G-C | ** | ||||||
hg19:Y:3790838-G-T hg38:Y:3922797-G-T | 8×TA | ** | |||||
hg19:Y:3869705-C-A hg38:Y:4001664-C-A | ** | ||||||
hg19:Y:3953503-G-A hg38:Y:4085462-G-A | ** | ||||||
hg19:Y:4039271-G-T hg38:Y:4171230-G-T | ** | ||||||
hg19:Y:4063722-T-C hg38:Y:4195681-T-C | ** | ||||||
hg19:Y:4158067-G-C hg38:Y:4290026-G-C | ** | ||||||
hg19:Y:4206888-TA-T hg38:Y:4338847-TA-T | ** | ||||||
hg19:Y:4285801-G-T hg38:Y:4417760-G-T | ** | ||||||
hg19:Y:4349579-C-A hg38:Y:4481538-C-A | ** | ||||||
hg19:Y:4450497-G-T hg38:Y:4582456-G-T | ** | ||||||
hg19:Y:4520212-C-A hg38:Y:4652171-C-A | ** | ||||||
hg19:Y:4740860-C-A hg38:Y:4872819-C-A | ** | ||||||
hg19:Y:4770442-G-C hg38:Y:4902401-G-C | ** | ||||||
hg19:Y:5030363-C-A hg38:Y:5162322-C-A | ** | ||||||
hg19:Y:5176131-G-T hg38:Y:5308090-G-T | ** | ||||||
hg19:Y:5301636-G-T hg38:Y:5433595-G-T | ** | ||||||
hg19:Y:5343788-G-T hg38:Y:5475747-G-T | ** | ||||||
hg19:Y:5441811-G-T hg38:Y:5573770-G-T | ** | ||||||
hg19:Y:5460429-CT-C hg38:Y:5592388-CT-C | ** | ||||||
hg19:Y:5578355-A-C hg38:Y:5710314-A-C | ** | ||||||
hg19:Y:5578630-G-T hg38:Y:5710589-G-T | ** | ||||||
hg19:Y:5618309-G-T hg38:Y:5750268-G-T | ** | ||||||
hg19:Y:5629458-G-T hg38:Y:5761417-G-T | ** | ||||||
hg19:Y:5631734-C-A hg38:Y:5763693-C-A | ** | ||||||
hg19:Y:5700516-G-T hg38:Y:5832475-G-T | FTB50934 | ** | |||||
hg19:Y:5707052-G-T hg38:Y:5839011-G-T | ** | ||||||
hg19:Y:5714313-A-G hg38:Y:5846272-A-G | ** | ||||||
hg19:Y:5750639-C-A hg38:Y:5882598-C-A | ** | ||||||
hg19:Y:5797773-G-T hg38:Y:5929732-G-T | ** | ||||||
hg19:Y:5827281-C-A hg38:Y:5959240-C-A | ** | ||||||
hg19:Y:5854941-G-T hg38:Y:5986900-G-T | ** | ||||||
hg19:Y:5886700-C-A hg38:Y:6018659-C-A | ** | ||||||
hg19:Y:6012881-C-A hg38:Y:6144840-C-A | ** | ||||||
hg19:Y:6085416-G-A hg38:Y:6217375-G-A | ** | ||||||
hg19:Y:6233783-T-A hg38:Y:6365742-T-A | IR3_Dst | ** | |||||
hg19:Y:6233792-T-A hg38:Y:6365751-T-A | IR3_Dst | ** | |||||
hg19:Y:6284394-T-A hg38:Y:6416353-T-A | IR3_Dst | ** | |||||
hg19:Y:6466543-G-T hg38:Y:6598502-G-T | ** | ||||||
hg19:Y:6675787-C-A hg38:Y:6807746-C-A | ** | ||||||
hg19:Y:6998051-C-A hg38:Y:7130010-C-A | ** | ||||||
hg19:Y:7093438-G-T hg38:Y:7225397-G-T | ** | ||||||
hg19:Y:7107027-A-T hg38:Y:7238986-A-T | ** | ||||||
hg19:Y:7107350-G-T hg38:Y:7239309-G-T | ** | ||||||
hg19:Y:7217295-A-G hg38:Y:7349254-A-G | ** | ||||||
hg19:Y:7217298-G-T hg38:Y:7349257-G-T | ** | ||||||
hg19:Y:7320080-T-A hg38:Y:7452039-T-A | ** | ||||||
hg19:Y:7534554-G-T hg38:Y:7666513-G-T | ** | ||||||
hg19:Y:7665397-C-A hg38:Y:7797356-C-A | ** | ||||||
hg19:Y:7713460-C-A hg38:Y:7845419-C-A | ** | ||||||
hg19:Y:7714866-AAAAT-A hg38:Y:7846825-AAAAT-A | ** | ||||||
hg19:Y:8163057-G-T hg38:Y:8295016-G-T | ** | ||||||
hg19:Y:8762025-A-C hg38:Y:8893984-A-C | ** | ||||||
hg19:Y:8811257-C-A hg38:Y:8943216-C-A | ** | ||||||
hg19:Y:8819508-A-G hg38:Y:8951467-A-G | FT67416 | ** | |||||
hg19:Y:8854184-G-T hg38:Y:8986143-G-T | ** | ||||||
hg38:Y:9122775-C-A | ** | ||||||
hg19:Y:9080437-G-A hg38:Y:9242828-G-A | ** | ||||||
hg19:Y:9081346-G-T hg38:Y:9243737-G-T | ** | ||||||
hg19:Y:9131661-C-A hg38:Y:9294052-C-A | ** | ||||||
hg19:Y:9136227-GA-G hg38:Y:9298618-GA-G | ** | ||||||
hg19:Y:9329141-C-T hg38:Y:9491532-C-T | ** | ||||||
hg19:Y:9426865-C-A hg38:Y:9589256-C-A | ** | ||||||
hg19:Y:9465205-A-G hg38:Y:9627596-A-G | ** | ||||||
hg19:Y:9562665-A-C hg38:Y:9725056-A-C | IR3_Prx | ** | |||||
hg19:Y:9732972-C-A hg38:Y:9895363-C-A | IR3_Prx | ** | |||||
hg19:Y:9900396-C-A hg38:Y:10062787-C-A | ** | ||||||
hg19:Y:9939939-C-T hg38:Y:10102330-C-T | ** | ||||||
hg19:Y:9947245-G-T hg38:Y:10109636-G-T | ** | ||||||
hg19:Y:9947251-G-T hg38:Y:10109642-G-T | ** | ||||||
hg19:Y:10034110-C-A hg38:Y:10196501-C-A | ** | ||||||
hg38:Y:10665519-C-A | ** | ||||||
hg38:Y:10686147-C-A | ** | ||||||
hg38:Y:10687436-C-A | ** | ||||||
hg38:Y:10749843-T-G | ** | ||||||
hg38:Y:10764526-T-C | ** | ||||||
hg38:Y:10764541-T-G | ** | ||||||
hg38:Y:10764569-C-CCACTA | ** | ||||||
hg38:Y:10771593-C-A | ** | ||||||
hg38:Y:10782436-G-C | ** | ||||||
hg38:Y:10782951-C-A | ** | ||||||
hg38:Y:10795378-C-A | ** | ||||||
hg38:Y:10813246-G-T | ** | ||||||
hg38:Y:10828446-C-A | ** | ||||||
hg38:Y:10836534-C-A | ** | ||||||
hg38:Y:10844050-G-C | ** | ||||||
hg38:Y:10845672-A-ATACTGTTCCG | ** | ||||||
hg38:Y:10857313-T-A | ** | ||||||
hg38:Y:10857314-A-T | ** | ||||||
hg38:Y:10857320-T-A | ** | ||||||
hg38:Y:10857328-C-A | ** | ||||||
hg38:Y:10857336-C-CCATTG | ** | ||||||
hg38:Y:10877668-C-A | ** | ||||||
hg38:Y:10886765-C-A | ** | ||||||
hg38:Y:10916686-A-C | ** | ||||||
hg38:Y:10917763-A-G | ** | ||||||
hg38:Y:10934629-C-A | ** | ||||||
hg38:Y:10935814-C-G | ** | ||||||
hg38:Y:10935843-C-T | ** | ||||||
hg38:Y:10939590-T-A | ** | ||||||
hg38:Y:10939601-C-A | ** | ||||||
hg38:Y:10940546-C-A | ** | ||||||
hg38:Y:10941582-C-T | ** | ||||||
hg38:Y:10946600-A-AATCCATTGCT | ** | ||||||
hg38:Y:10947289-G-T | ** | ||||||
hg38:Y:10950367-C-A | ** | ||||||
hg38:Y:10951165-G-T | ** | ||||||
hg38:Y:10954246-C-A | ** | ||||||
hg38:Y:10958928-T-G | ** | ||||||
hg38:Y:10973028-C-A | ** | ||||||
hg38:Y:10976955-T-A | ** | ||||||
hg38:Y:10976965-T-G | ** | ||||||
hg38:Y:10988073-C-A | ** | ||||||
hg38:Y:10988081-C-A | ** | ||||||
hg38:Y:10991989-C-T | ** | ||||||
hg38:Y:10993347-C-A | ** | ||||||
hg38:Y:10993980-T-G | ** | ||||||
hg38:Y:10994269-CCAT-C | ** | ||||||
hg38:Y:11000584-A-G | ** | ||||||
hg38:Y:11000992-G-C | ** | ||||||
hg38:Y:11011894-C-A | ** | ||||||
hg38:Y:11026884-C-A | ** | ||||||
hg38:Y:11034404-C-A | ** | ||||||
hg38:Y:11037092-C-A | ** | ||||||
hg19:Y:13271639-G-T hg38:Y:11115963-G-T | ** | ||||||
hg19:Y:13568628-T-G hg38:Y:11412952-T-G | ** | ||||||
hg19:Y:13592243-C-A hg38:Y:11436567-C-A | ** | ||||||
hg19:Y:13718541-G-T hg38:Y:11562865-G-T | DYZ17 | ** | |||||
hg38:Y:11665562-G-A | DYZ17 | ** | |||||
hg38:Y:11675693-A-T | DYZ17 | ** | |||||
hg38:Y:11675726-A-G | DYZ17 | ** | |||||
hg38:Y:11677843-G-T | DYZ17 | ** | |||||
hg19:Y:13803117-G-T hg38:Y:11682411-G-T | DYZ17 | ** | |||||
hg19:Y:13854973-A-G hg38:Y:11734267-A-G | FTB50670 | DYZ17 | ** | ||||
hg19:Y:13859554-C-T hg38:Y:11738848-C-T | FT109145 | DYZ17 | ** | ||||
hg19:Y:13911390-A-G hg38:Y:11790684-A-G | ** | ||||||
hg19:Y:13969725-G-T hg38:Y:11849019-G-T | ** | ||||||
hg19:Y:13987198-A-C hg38:Y:11866492-A-C | ** | ||||||
hg19:Y:14033847-C-A hg38:Y:11913141-C-A | ** | ||||||
hg19:Y:14050291-G-T hg38:Y:11929585-G-T | ** | ||||||
hg19:Y:14051662-C-A hg38:Y:11930956-C-A | ** | ||||||
hg19:Y:14307551-G-T hg38:Y:12186845-G-T | ** | ||||||
hg19:Y:14338949-T-A hg38:Y:12218244-T-A | ** | ||||||
hg19:Y:14370800-C-A hg38:Y:12250096-C-A | ** | ||||||
hg19:Y:14470809-G-T hg38:Y:12350078-G-T | ** | ||||||
hg19:Y:14532808-C-A hg38:Y:12421009-C-A | ** | ||||||
hg19:Y:14537864-C-A hg38:Y:12426065-C-A | ** | ||||||
hg19:Y:14563944-C-A hg38:Y:12452144-C-A | ** | ||||||
hg19:Y:14593587-T-C hg38:Y:12481787-T-C | ** | ||||||
hg19:Y:14627042-T-C hg38:Y:12515110-T-C | ** | ||||||
hg19:Y:14717377-G-T hg38:Y:12605445-G-T | ** | ||||||
hg19:Y:14779452-G-A hg38:Y:12667522-G-A | ** | ||||||
hg19:Y:14808529-A-T hg38:Y:12696600-A-T | ** | ||||||
hg19:Y:14934465-A-C hg38:Y:12822530-A-C | ** | ||||||
hg19:Y:15282565-C-A hg38:Y:13170664-C-A | ** | ||||||
hg19:Y:15336048-AAG-T hg38:Y:13224166-AAG-T | ** | ||||||
hg19:Y:15685842-G-T hg38:Y:13573962-G-T | ** | ||||||
hg19:Y:15803584-C-A hg38:Y:13691704-C-A | ** | ||||||
hg19:Y:15815202-T-C hg38:Y:13703322-T-C | ** | ||||||
hg19:Y:15928532-C-A hg38:Y:13816652-C-A | ** | ||||||
hg19:Y:16033745-C-A hg38:Y:13921865-C-A | ** | ||||||
hg19:Y:16476338-G-A hg38:Y:14364458-G-A | ** | ||||||
hg19:Y:16617075-A-G hg38:Y:14505195-A-G | ** | ||||||
hg19:Y:16868512-C-A hg38:Y:14756632-C-A | ** | ||||||
hg19:Y:16922269-C-A hg38:Y:14810389-C-A | ** | ||||||
hg19:Y:16940831-C-A hg38:Y:14828951-C-A | ** | ||||||
hg19:Y:16993817-C-A hg38:Y:14881937-C-A | ** | ||||||
hg19:Y:17030632-C-A hg38:Y:14918752-C-A | ** | ||||||
hg19:Y:17038560-C-A hg38:Y:14926680-C-A | ** | ||||||
hg19:Y:17085248-T-C hg38:Y:14973368-T-C | ** | ||||||
hg19:Y:17328963-C-A hg38:Y:15217083-C-A | ** | ||||||
hg19:Y:17428226-A-C hg38:Y:15316346-A-C | ** | ||||||
hg19:Y:17428230-T-C hg38:Y:15316350-T-C | ** | ||||||
hg19:Y:17548576-A-G hg38:Y:15436696-A-G | ** | ||||||
hg19:Y:17622078-GT-G hg38:Y:15510198-GT-G | ** | ||||||
hg19:Y:17637124-C-A hg38:Y:15525244-C-A | ** | ||||||
hg19:Y:17775001-T-C hg38:Y:15663121-T-C | ** | ||||||
hg19:Y:17834360-C-A hg38:Y:15722480-C-A | ** | ||||||
hg19:Y:17839784-G-A hg38:Y:15727904-G-A | ** | ||||||
hg19:Y:17840397-T-A hg38:Y:15728517-T-A | ** | ||||||
hg19:Y:17848760-C-T hg38:Y:15736880-C-T | ** | ||||||
hg19:Y:17848763-C-T hg38:Y:15736883-C-T | ** | ||||||
hg19:Y:17848769-C-T hg38:Y:15736889-C-T | ** | ||||||
hg19:Y:17848775-A-T hg38:Y:15736895-A-T | ** | ||||||
hg19:Y:17848779-C-T hg38:Y:15736899-C-T | ** | ||||||
hg19:Y:17848821-T-C hg38:Y:15736941-T-C | ** | ||||||
hg19:Y:17848822-G-A hg38:Y:15736942-G-A | ** | ||||||
hg19:Y:17858777-T-A hg38:Y:15746897-T-A | ** | ||||||
hg19:Y:18189287-C-A hg38:Y:16077407-C-A | ** | ||||||
hg19:Y:18346571-T-A hg38:Y:16234691-T-A | P6_Prx | ** | |||||
hg19:Y:18427698-G-A hg38:Y:16315818-G-A | P6_Dst | ** | |||||
hg19:Y:18793592-C-T hg38:Y:16681712-C-T | ** | ||||||
hg19:Y:18795857-C-A hg38:Y:16683977-C-A | ** | ||||||
hg19:Y:18810949-C-A hg38:Y:16699069-C-A | ** | ||||||
hg19:Y:18845186-G-T hg38:Y:16733306-G-T | ** | ||||||
hg19:Y:18856303-T-A hg38:Y:16744423-T-A | ** | ||||||
hg19:Y:18892140-C-A hg38:Y:16780260-C-A | ** | ||||||
hg19:Y:18902991-C-A hg38:Y:16791111-C-A | ** | ||||||
hg19:Y:18928897-A-G hg38:Y:16817017-A-G | ** | ||||||
hg19:Y:19098851-C-A hg38:Y:16986971-C-A | ** | ||||||
hg19:Y:19187622-C-T hg38:Y:17075742-C-T | ** | ||||||
hg19:Y:19187628-A-T hg38:Y:17075748-A-T | ** | ||||||
hg19:Y:19187629-A-ATT hg38:Y:17075749-A-ATT | ** | ||||||
hg19:Y:19187646-T-G hg38:Y:17075766-T-G | ** | ||||||
hg19:Y:19302183-A-G hg38:Y:17190303-A-G | ** | ||||||
hg19:Y:19377164-A-G hg38:Y:17265284-A-G | ** | ||||||
hg19:Y:19377166-AG-A hg38:Y:17265286-AG-A | ** | ||||||
hg19:Y:19377170-GA-G hg38:Y:17265290-GA-G | ** | ||||||
hg19:Y:19377182-GAA-G hg38:Y:17265302-GAA-G | ** | ||||||
hg19:Y:19399915-G-A hg38:Y:17288035-G-A | FT144201 | ** | |||||
hg19:Y:19427660-G-T hg38:Y:17315780-G-T | ** | ||||||
hg19:Y:19540571-G-T hg38:Y:17428691-G-T | ** | ||||||
hg19:Y:19795179-A-T hg38:Y:17683299-A-T | P5_Prx | ** | |||||
hg19:Y:19795184-G-T hg38:Y:17683304-G-T | P5_Prx | ** | |||||
hg19:Y:19824846-T-C hg38:Y:17712966-T-C | P5_Prx | ** | |||||
hg19:Y:20066103-A-G hg38:Y:17954223-A-G | P5_Gap | ** | |||||
hg19:Y:20478424-C-A hg38:Y:18316538-C-A | P5_Dst | ** | |||||
hg19:Y:20645774-G-C hg38:Y:18483888-G-C | P4_Prx | ** | |||||
hg19:Y:20842576-G-A hg38:Y:18680690-G-A | P4_Dst | ** | |||||
hg19:Y:21115606-G-T hg38:Y:18953720-G-T | ** | ||||||
hg19:Y:21127293-C-A hg38:Y:18965407-C-A | ** | ||||||
hg19:Y:21152561-TC-T hg38:Y:18990675-TC-T | ** | ||||||
hg19:Y:21196544-A-T hg38:Y:19034658-A-T | ** | ||||||
hg19:Y:21223265-G-A hg38:Y:19061379-G-A | ** | ||||||
hg19:Y:21323221-C-A hg38:Y:19161335-C-A | ** | ||||||
hg19:Y:21352716-A-C hg38:Y:19190830-A-C | ** | ||||||
hg19:Y:21379366-C-A hg38:Y:19217480-C-A | ** | ||||||
hg19:Y:21462605-A-G hg38:Y:19300719-A-G | ** | ||||||
hg19:Y:21462621-C-T hg38:Y:19300735-C-T | ** | ||||||
hg19:Y:21462631-G-A hg38:Y:19300745-G-A | ** | ||||||
hg19:Y:21503327-C-A hg38:Y:19341441-C-A | ** | ||||||
hg19:Y:21700639-C-A hg38:Y:19538753-C-A | ** | ||||||
hg19:Y:21848187-C-A hg38:Y:19686301-C-A | ** | ||||||
hg19:Y:21959386-C-A hg38:Y:19797500-C-A | ** | ||||||
hg19:Y:22030030-A-C hg38:Y:19868144-A-C | ** | ||||||
hg19:Y:22056718-C-A hg38:Y:19894832-C-A | ** | ||||||
hg19:Y:22170860-G-T hg38:Y:20008974-G-T | ** | ||||||
hg19:Y:22185881-C-TA hg38:Y:20023995-C-TA | ** | ||||||
hg19:Y:22639459-G-A hg38:Y:20477573-G-A | ** | ||||||
hg19:Y:22770936-T-A hg38:Y:20609050-T-A | ** | ||||||
hg19:Y:22811869-C-A hg38:Y:20649983-C-A | S24732 | ** | |||||
hg19:Y:22881230-G-T hg38:Y:20719344-G-T | ** | ||||||
hg19:Y:23002792-C-A hg38:Y:20840906-C-A | ** | ||||||
hg19:Y:23048506-C-A hg38:Y:20886620-C-A | ** | ||||||
hg19:Y:23137609-C-A hg38:Y:20975723-C-A | ** | ||||||
hg19:Y:23200820-T-G hg38:Y:21038934-T-G | ** | ||||||
hg19:Y:23291352-T-C hg38:Y:21129466-T-C | ** | ||||||
hg19:Y:23356604-T-C hg38:Y:21194718-T-C | ** | ||||||
hg19:Y:23432715-C-A hg38:Y:21270829-C-A | ** | ||||||
hg19:Y:23715795-T-G hg38:Y:21553909-T-G | ** | ||||||
hg19:Y:23807010-G-A hg38:Y:21645124-G-A | ** | ||||||
hg19:Y:24017408-G-GTC hg38:Y:21871261-G-GTC | 12×T | ** | |||||
hg19:Y:24244676-C-A hg38:Y:22098529-C-A | P3_b1 | ** | |||||
hg19:Y:24275016-C-A hg38:Y:22128869-C-A | P3_b1 | ** | |||||
hg19:Y:24302707-T-A hg38:Y:22156560-T-A | P3_t1 | ** | |||||
hg19:Y:24403385-T-G hg38:Y:22257238-T-G | ** | ||||||
hg19:Y:24405927-A-T hg38:Y:22259780-A-T | ** | ||||||
hg19:Y:24429995-C-A hg38:Y:22283848-C-A | ** | ||||||
hg19:Y:24466392-C-A hg38:Y:22320245-C-A | ** | ||||||
hg19:Y:25096570-T-C hg38:Y:22950423-T-C | g1 | ** | |||||
hg19:Y:26250744-G-A hg38:Y:24104597-G-A | P1_Y1 | ** | |||||
hg19:Y:28396884-C-A hg38:Y:26250737-C-A | P1_gr2 | ** | |||||
hg19:Y:28609012-C-A hg38:Y:26462865-C-A | ** | ||||||
hg19:Y:28714102-G-T hg38:Y:26567955-G-T | ** | ||||||
hg38:Y:56823786-G-T | ** | ||||||
hg38:Y:56851118-C-A | ** | ||||||
hg38:Y:56851129-T-G | ** | ||||||
hg38:Y:56862671-C-A | ** | ||||||
hg38:Y:56868823-G-T | ** | ||||||
hg38:Y:56868907-G-T | ** | ||||||
hg19:Y:4918488-C-A hg38:Y:5050447-C-A | FGC39234 | *** | |||||
hg38:Y:10851123-A-AG | *** | ||||||
hg38:Y:11676642-T-G | DYZ17 | *** | |||||
hg38:Y:11676643-G-T | DYZ17 | *** | |||||
hg38:Y:11676646-A-G | DYZ17 | *** | |||||
hg19:Y:21457468-G-T hg38:Y:19295582-G-T | *** | ||||||
hg19:Y:17942617-TAA-T,TAAA hg38:Y:15830737-TAA-T,TAAA | 14×A | *** | |||||
hg19:Y:17405915-C-A hg38:Y:15294035-C-A | *** | ||||||
hg19:Y:27647719-C-A hg38:Y:25501572-C-A | P1_Y2 | *** | |||||
hg19:Y:8501795-C-A hg38:Y:8633754-C-A | *** | ||||||
hg19:Y:14076098-C-A hg38:Y:11955392-C-A | *** | ||||||
hg19:Y:16422362-C-A hg38:Y:14310482-C-A | *** | ||||||
hg38:Y:10912569-C-A | *** | ||||||
hg38:Y:10663109-C-A | *** | ||||||
hg19:Y:14827785-C-A hg38:Y:12715852-C-A | *** | ||||||
hg38:Y:10899053-T-A | *** | ||||||
hg38:Y:10962777-T-C | *** | ||||||
hg38:Y:10851124-CTG-C,CC | *** | ||||||
hg19:Y:13601956-C-A hg38:Y:11446280-C-A | *** | ||||||
hg19:Y:28635384-C-A hg38:Y:26489237-C-A | *** | ||||||
hg38:Y:10872313-C-A | *** | ||||||
hg19:Y:6757372-C-A hg38:Y:6889331-C-A | *** | ||||||
hg19:Y:10025397-C-A hg38:Y:10187788-C-A | *** | ||||||
hg19:Y:22055557-C-A hg38:Y:19893671-C-A | *** | ||||||
hg19:Y:2813365-C-A hg38:Y:2945324-C-A | *** | ||||||
hg19:Y:2998279-C-T hg38:Y:3130238-C-T | *** | ||||||
hg19:Y:3726316-C-A hg38:Y:3858275-C-A | *** | ||||||
hg19:Y:7145708-G-T hg38:Y:7277667-G-T | *** | ||||||
hg19:Y:9134504-C-A hg38:Y:9296895-C-A | *** | ||||||
hg38:Y:10676961-C-A | *** | ||||||
hg38:Y:10744433-CAACTGCACTG-C,CAACTCCACTC | *** | ||||||
hg38:Y:10866794-T-C | *** | ||||||
hg38:Y:10932577-C-A | *** | ||||||
hg38:Y:10961125-C-A | *** | ||||||
hg38:Y:11005312-C-T | *** | ||||||
hg38:Y:11023201-C-T | *** | ||||||
hg38:Y:11026916-A-C,T | *** | ||||||
hg38:Y:11034038-G-T | *** | ||||||
hg19:Y:13838667-G-T hg38:Y:11717961-G-T | FTA26762 | DYZ17 | *** | ||||
hg19:Y:13926853-G-A hg38:Y:11806147-G-A | *** | ||||||
hg19:Y:14232635-C-A hg38:Y:12111929-C-A | *** | ||||||
hg19:Y:15698354-C-A hg38:Y:13586474-C-A | *** | ||||||
hg19:Y:16421650-G-A hg38:Y:14309770-G-A | *** | ||||||
hg19:Y:16747383-G-A hg38:Y:14635503-G-A | *** | ||||||
hg19:Y:17277925-C-A hg38:Y:15166045-C-A | *** | ||||||
hg19:Y:18753040-T-C hg38:Y:16641160-T-C | *** | ||||||
hg19:Y:18779415-C-A hg38:Y:16667535-C-A | *** | ||||||
hg19:Y:19476353-C-A hg38:Y:17364473-C-A | *** | ||||||
hg19:Y:21137592-C-T hg38:Y:18975706-C-T | *** | ||||||
hg19:Y:22306707-A-G hg38:Y:20144821-A-G | DYZ19 | *** | |||||
hg19:Y:22478633-T-G hg38:Y:20316747-T-G | DYZ19 | *** | |||||
hg19:Y:22478634-C-G hg38:Y:20316748-C-G | FT460131 | DYZ19 | *** | ||||
hg19:Y:22478637-G-C hg38:Y:20316751-G-C | BY224066 | DYZ19 | *** | ||||
hg19:Y:22478651-C-G hg38:Y:20316765-C-G | BY224069 | DYZ19 | *** | ||||
hg19:Y:22524959-C-A hg38:Y:20363073-C-A | *** | ||||||
hg19:Y:22962272-C-A hg38:Y:20800386-C-A | *** | ||||||
hg19:Y:23036956-T-C hg38:Y:20875070-T-C | *** | ||||||
hg19:Y:23838727-G-A hg38:Y:21676841-G-A | *** | ||||||
hg19:Y:24449309-C-A hg38:Y:22303162-C-A | *** | ||||||
hg38:Y:56843488-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 181317 | 9349083 | 7613345 | 7508416 |
Used in age calculations | 9349083 | 7613345 | 7508416 |
Counts of SNPs | 10 | 10 |
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