Shrout
BigY2: 506871MDKA Birth:
GermanyTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 506871 |
|---|---|---|---|---|---|---|---|
| hg19:Y:25991117-A-T hg38:Y:23844970-A-T | P1_Y1 | A* | |||||
| hg19:Y:22282268-T-A hg38:Y:20120382-T-A | DYZ19 | A* | |||||
| hg19:Y:28816696-T-A hg38:Y:26670549-T-A | A* | ||||||
| hg19:Y:6277573-G-A hg38:Y:6409532-G-A | IR3_Dst | A* | |||||
| hg19:Y:6388661-G-A hg38:Y:6520620-G-A | A* | ||||||
| hg19:Y:19748694-G-A hg38:Y:17636814-G-A | P5_Prx | A* | |||||
| hg19:Y:19999978-T-C hg38:Y:17888098-T-C | P5_Prx | A* | |||||
| hg19:Y:20779506-C-A hg38:Y:18617620-C-A | P4_Prx | A* | |||||
| hg19:Y:22304533-C-A hg38:Y:20142647-C-A | DYZ19 | A* | |||||
| hg19:Y:22307780-A-G hg38:Y:20145894-A-G | DYZ19 | A* | |||||
| hg19:Y:26012725-A-C hg38:Y:23866578-A-C | P1_Y1 | A* | |||||
| hg19:Y:26328543-G-A hg38:Y:24182396-G-A | P1_Y1 | A* | |||||
| hg19:Y:26329319-C-T hg38:Y:24183172-C-T | P1_Y1 | A* | |||||
| hg19:Y:21398584-T-A hg38:Y:19236698-T-A | 2895596-C-T | F3195 M5532 PF1806 | Y | Y | + | ||
| hg19:Y:6637039-A-G hg38:Y:6768998-A-G | BY60465 | Y | Y | + | |||
| hg19:Y:6743808-G-A hg38:Y:6875767-G-A | BY61037 | Y | Y | + | |||
| hg19:Y:7401739-T-C hg38:Y:7533698-T-C | BY64989 | Y | Y | + | |||
| hg19:Y:7507047-A-G hg38:Y:7639006-A-G | BY65483 | + | |||||
| hg19:Y:7854122-C-T hg38:Y:7986081-C-T | BY68246 | Y | Y | + | |||
| hg19:Y:9863103-G-C hg38:Y:10025494-G-C | BY81556 | Y | Y | + | |||
| hg19:Y:13870202-A-T hg38:Y:11749496-A-T | BY91754 | DYZ17 | + | ||||
| hg19:Y:14379630-G-C hg38:Y:12258926-G-C | BY211465 | Y | Y | + | |||
| hg19:Y:15746947-T-C hg38:Y:13635067-T-C | BY103792 | Y | Y | + | |||
| hg19:Y:16076846-T-TA hg38:Y:13964966-T-TA | 8×A | + | |||||
| hg19:Y:16960694-A-G hg38:Y:14848814-A-G | BY111419 | Y | Y | + | |||
| hg19:Y:17081221-A-G hg38:Y:14969341-A-G | BY112183 | Y | Y | + | |||
| hg19:Y:17680767-C-A hg38:Y:15568887-C-A | FT181172 | Y | Y | + | |||
| hg19:Y:18404042-T-G hg38:Y:16292162-T-G | BY156776 | P6_Gap | + | ||||
| hg19:Y:22470272-C-G hg38:Y:20308386-C-G | FGC82591 | DYZ19 | + | ||||
| hg19:Y:22478765-G-A hg38:Y:20316879-G-A | FT460158 | DYZ19 | + | ||||
| hg19:Y:22508018-G-C hg38:Y:20346132-G-C | BY53380 | DYZ19 | + | ||||
| hg19:Y:22952172-A-T hg38:Y:20790286-A-T | BY141997 | Y | Y | + | |||
| hg19:Y:23325491-G-A hg38:Y:21163605-G-A | BY144604 | Y | Y | + | |||
| hg19:Y:22225129-G-C hg38:Y:20063243-G-C | DYZ19 | * | |||||
| hg19:Y:22253253-C-G hg38:Y:20091367-C-G | DYZ19 | * | |||||
| hg19:Y:22422729-T-A hg38:Y:20260843-T-A | DYZ19 | * | |||||
| hg19:Y:22436406-T-G hg38:Y:20274520-T-G | DYZ19 | * | |||||
| hg19:Y:28798952-C-A hg38:Y:26652805-C-A | ** | ||||||
| hg19:Y:14175005-C-A hg38:Y:12054299-C-A | ** | ||||||
| hg19:Y:16651979-G-GGT hg38:Y:14540099-G-GGT | 12×GT | ** | |||||
| hg19:Y:7190705-GATA-G hg38:Y:7322664-GATA-G | 8×ATA | ** | |||||
| hg19:Y:9956597-G-A hg38:Y:10118988-G-A | FGC7451 | ** | |||||
| hg19:Y:15116527-T-G hg38:Y:13004614-T-G | FT312090 | ** | |||||
| hg19:Y:19539568-G-GT hg38:Y:17427688-G-GT | 9×T | ** | |||||
| hg19:Y:13461312-C-T hg38:Y:11305636-C-T | ** | ||||||
| hg19:Y:14295537-G-T hg38:Y:12174831-G-T | ** | ||||||
| hg19:Y:13461249-T-C hg38:Y:11305573-T-C | ** | ||||||
| hg19:Y:19052414-CAAAAAAAAA-C hg38:Y:16940534-CAAAAAAAAA-C | 24×A | ** | |||||
| hg19:Y:7310570-C-A hg38:Y:7442529-C-A | ** | ||||||
| hg19:Y:7269315-C-A hg38:Y:7401274-C-A | ** | ||||||
| hg19:Y:24274002-A-AG hg38:Y:22127855-A-AG | P3_b1 | ** | |||||
| hg38:Y:11028223-T-TA | ** | ||||||
| hg19:Y:6699137-T-G hg38:Y:6831096-T-G | ** | ||||||
| hg19:Y:13254002-GTT-G hg38:Y:11098326-GTT-G | 17×T | ** | |||||
| hg38:Y:10652670-C-T | ** | ||||||
| hg38:Y:10801739-T-C | ** | ||||||
| hg19:Y:14029266-C-A hg38:Y:11908560-C-A | ** | ||||||
| hg19:Y:2745822-C-A hg38:Y:2877781-C-A | ** | ||||||
| hg38:Y:10748211-A-G | ** | ||||||
| hg38:Y:10748212-T-A | ** | ||||||
| hg38:Y:10748261-C-T | ** | ||||||
| hg38:Y:10787562-C-T | ** | ||||||
| hg19:Y:23952689-T-A hg38:Y:21806542-T-A | ** | ||||||
| hg38:Y:10748284-T-C | ** | ||||||
| hg19:Y:8776645-C-A hg38:Y:8908604-C-A | ** | ||||||
| hg19:Y:15081208-C-A hg38:Y:12969298-C-A | ** | ||||||
| hg19:Y:17012836-C-A hg38:Y:14900956-C-A | ** | ||||||
| hg19:Y:15839797-C-A hg38:Y:13727917-C-A | ** | ||||||
| hg19:Y:15712230-C-A hg38:Y:13600350-C-A | ** | ||||||
| hg19:Y:18008664-T-G hg38:Y:15896784-T-G | P7_Dst | ** | |||||
| hg38:Y:10927892-T-G | ** | ||||||
| hg38:Y:10927908-C-T | FT144533 | ** | |||||
| hg19:Y:4540203-C-A hg38:Y:4672162-C-A | ** | ||||||
| hg38:Y:10800967-C-T | ** | ||||||
| hg38:Y:10801014-C-A | ** | ||||||
| hg38:Y:10921076-C-A | FT436609 | ** | |||||
| hg19:Y:13461229-C-A hg38:Y:11305553-C-A | ** | ||||||
| hg19:Y:13461231-G-A hg38:Y:11305555-G-A | ** | ||||||
| hg19:Y:13461263-C-A hg38:Y:11305587-C-A | ** | ||||||
| hg19:Y:13461277-C-A hg38:Y:11305601-C-A | F18164 | ** | |||||
| hg19:Y:13461326-A-T hg38:Y:11305650-A-T | ** | ||||||
| hg19:Y:13461330-C-G hg38:Y:11305654-C-G | ** | ||||||
| hg19:Y:18343595-C-A hg38:Y:16231715-C-A | P6_Prx | ** | |||||
| hg38:Y:10889227-C-T | ** | ||||||
| hg38:Y:10866011-T-C | ** | ||||||
| hg19:Y:21002535-T-G hg38:Y:18840649-T-G | P4_Dst | 16×TC | ** | ||||
| hg19:Y:4101134-C-A hg38:Y:4233093-C-A | ** | ||||||
| hg19:Y:7436133-C-A hg38:Y:7568092-C-A | ** | ||||||
| hg38:Y:10673939-A-C | ** | ||||||
| hg38:Y:10673945-C-CTT | ** | ||||||
| hg38:Y:10673947-CCA-C | ** | ||||||
| hg19:Y:7313688-C-A hg38:Y:7445647-C-A | FT178975 | ** | |||||
| hg38:Y:10898359-A-T | ** | ||||||
| hg38:Y:10748177-T-G | ** | ||||||
| hg38:Y:10989459-C-T | ** | ||||||
| hg19:Y:13898754-G-GTTT hg38:Y:11778048-G-GTTT | 26×T | ** | |||||
| hg19:Y:27620763-A-T hg38:Y:25474616-A-T | P1_Y2 | ** | |||||
| hg38:Y:10888664-G-A | FT233402 | ** | |||||
| hg38:Y:10843713-T-C | ** | ||||||
| hg38:Y:10843729-C-G | ** | ||||||
| hg38:Y:10961245-G-A | ** | ||||||
| hg38:Y:10971172-TTCCAC-T | ** | ||||||
| hg38:Y:10898374-T-G | ** | ||||||
| hg38:Y:10947325-CCCAAT-C | ** | ||||||
| hg19:Y:14549470-C-A hg38:Y:12437671-C-A | ** | ||||||
| hg38:Y:10761206-C-A | ** | ||||||
| hg19:Y:21328841-G-T hg38:Y:19166955-G-T | ** | ||||||
| hg19:Y:19356328-C-A hg38:Y:17244448-C-A | ** | ||||||
| hg38:Y:10823491-T-C | ** | ||||||
| hg19:Y:18630958-C-A hg38:Y:16519078-C-A | ** | ||||||
| hg38:Y:10787300-CA-C | ** | ||||||
| hg38:Y:10787302-CTCCA-C | ** | ||||||
| hg19:Y:16071153-C-A hg38:Y:13959273-C-A | ** | ||||||
| hg19:Y:13258466-C-A hg38:Y:11102790-C-A | ** | ||||||
| hg38:Y:10761164-A-T | ** | ||||||
| hg19:Y:17118395-CTTTTT-C hg38:Y:15006515-CTTTTT-C | 16×T | ** | |||||
| hg19:Y:7105167-GAA-G hg38:Y:7237126-GAA-G | 11×A | ** | |||||
| hg19:Y:15143658-C-A hg38:Y:13031745-C-A | ** | ||||||
| hg38:Y:10995771-A-T | FT439645 | ** | |||||
| hg19:Y:10016092-C-A hg38:Y:10178483-C-A | ** | ||||||
| hg19:Y:14059279-C-A hg38:Y:11938573-C-A | ** | ||||||
| hg19:Y:13700603-A-T hg38:Y:11544927-A-T | DYZ17 | ** | |||||
| hg19:Y:17885692-C-A hg38:Y:15773812-C-A | ** | ||||||
| hg19:Y:23565518-G-T hg38:Y:21403632-G-T | ** | ||||||
| hg19:Y:4123977-G-A hg38:Y:4255936-G-A | ** | ||||||
| hg38:Y:56845533-G-T | ** | ||||||
| hg19:Y:19754914-C-T hg38:Y:17643034-C-T | P5_Prx | ** | |||||
| hg38:Y:56742675-T-A | ** | ||||||
| hg19:Y:16016223-C-A hg38:Y:13904343-C-A | ** | ||||||
| hg19:Y:18993394-C-A hg38:Y:16881514-C-A | ** | ||||||
| hg38:Y:10932926-A-T | ** | ||||||
| hg19:Y:10022182-A-C hg38:Y:10184573-A-C | ** | ||||||
| hg19:Y:17104183-C-A hg38:Y:14992303-C-A | ** | ||||||
| hg38:Y:10843693-G-C | ** | ||||||
| hg19:Y:5199717-T-G hg38:Y:5331676-T-G | ** | ||||||
| hg19:Y:16410158-C-A hg38:Y:14298278-C-A | ** | ||||||
| hg38:Y:10900034-A-C | ** | ||||||
| hg19:Y:22236827-A-T hg38:Y:20074941-A-T | DYZ19 | ** | |||||
| hg19:Y:18750074-G-T hg38:Y:16638194-G-T | FTB76771 | ** | |||||
| hg19:Y:21442881-T-G hg38:Y:19280995-T-G | ** | ||||||
| hg19:Y:5577352-C-A hg38:Y:5709311-C-A | ** | ||||||
| hg19:Y:7868114-C-A hg38:Y:8000073-C-A | ** | ||||||
| hg38:Y:11675371-C-A | DYZ17 | ** | |||||
| hg19:Y:3218703-C-A hg38:Y:3350662-C-A | FT218832 | ** | |||||
| hg19:Y:14698458-CAAAAAA-C hg38:Y:12586524-CAAAAAA-C | 19×A | ** | |||||
| hg19:Y:9931997-C-A hg38:Y:10094388-C-A | ** | ||||||
| hg19:Y:3407743-C-A hg38:Y:3539702-C-A | ** | ||||||
| hg19:Y:28478366-C-A hg38:Y:26332219-C-A | ** | ||||||
| hg38:Y:56724770-A-T | ** | ||||||
| hg19:Y:7225466-C-A hg38:Y:7357425-C-A | ** | ||||||
| hg38:Y:10783199-G-T | ** | ||||||
| hg38:Y:10889298-C-G | ** | ||||||
| hg38:Y:10673012-C-G | ** | ||||||
| hg38:Y:10843703-AT-A | ** | ||||||
| hg38:Y:11670740-C-A | DYZ17 | ** | |||||
| hg19:Y:17584305-A-T hg38:Y:15472425-A-T | ** | ||||||
| hg38:Y:10998788-A-G | ** | ||||||
| hg19:Y:7307748-C-A hg38:Y:7439707-C-A | ** | ||||||
| hg19:Y:19948094-C-A hg38:Y:17836214-C-A | P5_Prx | ** | |||||
| hg19:Y:28479100-C-A hg38:Y:26332953-C-A | ** | ||||||
| hg19:Y:4672327-C-A hg38:Y:4804286-C-A | ** | ||||||
| hg38:Y:10898337-C-G | ** | ||||||
| hg19:Y:7211369-C-A hg38:Y:7343328-C-A | ** | ||||||
| hg19:Y:4552881-G-T hg38:Y:4684840-G-T | ** | ||||||
| hg19:Y:15732820-C-A hg38:Y:13620940-C-A | ** | ||||||
| hg38:Y:10900425-C-A | ** | ||||||
| hg19:Y:13700655-G-A hg38:Y:11544979-G-A | DYZ17 | ** | |||||
| hg19:Y:5243434-C-A hg38:Y:5375393-C-A | ** | ||||||
| hg38:Y:11003227-T-C | ** | ||||||
| hg19:Y:13290330-C-A hg38:Y:11134654-C-A | FT358046 | ** | |||||
| hg19:Y:5358568-C-A hg38:Y:5490527-C-A | ** | ||||||
| hg19:Y:24475256-C-T hg38:Y:22329109-C-T | Y112963 | ** | |||||
| hg38:Y:10802639-C-T | ** | ||||||
| hg19:Y:23350626-CTTTTTT-C hg38:Y:21188740-CTTTTTT-C | 21×T | ** | |||||
| hg38:Y:11649316-G-T | DYZ17 | ** | |||||
| hg19:Y:3345861-C-A hg38:Y:3477820-C-A | ** | ||||||
| hg19:Y:14451793-C-A hg38:Y:12331066-C-A | ** | ||||||
| hg38:Y:10974562-A-T | ** | ||||||
| hg38:Y:10793081-GTTCCA-G | ** | ||||||
| hg19:Y:18951350-C-A hg38:Y:16839470-C-A | ** | ||||||
| hg19:Y:19121885-C-A hg38:Y:17010005-C-A | ** | ||||||
| hg19:Y:16184170-C-A hg38:Y:14072290-C-A | FTB11203 | ** | |||||
| hg38:Y:10661092-G-T | ** | ||||||
| hg19:Y:13571657-C-G hg38:Y:11415981-C-G | ** | ||||||
| hg19:Y:17013117-C-A hg38:Y:14901237-C-A | ** | ||||||
| hg19:Y:3627781-C-A hg38:Y:3759740-C-A | FT223263 | ** | |||||
| hg19:Y:3850141-A-T hg38:Y:3982100-A-T | ** | ||||||
| hg38:Y:10777658-C-T | ** | ||||||
| hg19:Y:23787085-C-A hg38:Y:21625199-C-A | FT229814 | ** | |||||
| hg19:Y:15776105-G-T hg38:Y:13664225-G-T | ** | ||||||
| hg19:Y:22965587-G-T hg38:Y:20803701-G-T | ** | ||||||
| hg19:Y:13586083-C-A hg38:Y:11430407-C-A | ** | ||||||
| hg38:Y:10905870-A-C | ** | ||||||
| hg38:Y:10673023-C-T | ** | ||||||
| hg38:Y:10748266-C-A | ** | ||||||
| hg19:Y:2843994-G-T hg38:Y:2975953-G-T | ** | ||||||
| hg19:Y:2885703-C-T hg38:Y:3017662-C-T | ** | ||||||
| hg19:Y:2980800-G-T hg38:Y:3112759-G-T | ** | ||||||
| hg19:Y:3116460-A-T hg38:Y:3248419-A-T | ** | ||||||
| hg19:Y:3251799-G-T hg38:Y:3383758-G-T | ** | ||||||
| hg19:Y:3278185-C-A hg38:Y:3410144-C-A | ** | ||||||
| hg19:Y:3285127-A-G hg38:Y:3417086-A-G | ** | ||||||
| hg19:Y:3285181-A-G hg38:Y:3417140-A-G | ** | ||||||
| hg19:Y:3306199-G-T hg38:Y:3438158-G-T | ** | ||||||
| hg19:Y:3413688-A-G hg38:Y:3545647-A-G | ** | ||||||
| hg19:Y:3659036-T-G hg38:Y:3790995-T-G | ** | ||||||
| hg19:Y:3754736-C-A hg38:Y:3886695-C-A | ** | ||||||
| hg19:Y:3850111-T-A hg38:Y:3982070-T-A | ** | ||||||
| hg19:Y:3883388-G-T hg38:Y:4015347-G-T | ** | ||||||
| hg19:Y:4075953-A-T hg38:Y:4207912-A-T | ** | ||||||
| hg19:Y:4123946-G-A hg38:Y:4255905-G-A | ** | ||||||
| hg19:Y:4144996-G-T hg38:Y:4276955-G-T | ** | ||||||
| hg19:Y:4201615-G-T hg38:Y:4333574-G-T | ** | ||||||
| hg19:Y:4215384-G-T hg38:Y:4347343-G-T | ** | ||||||
| hg19:Y:4371907-C-A hg38:Y:4503866-C-A | ** | ||||||
| hg19:Y:4448964-A-T hg38:Y:4580923-A-T | ** | ||||||
| hg19:Y:4450424-C-A hg38:Y:4582383-C-A | ** | ||||||
| hg19:Y:4497499-C-A hg38:Y:4629458-C-A | ** | ||||||
| hg19:Y:4502356-T-A hg38:Y:4634315-T-A | ** | ||||||
| hg19:Y:4654166-G-T hg38:Y:4786125-G-T | ** | ||||||
| hg19:Y:4709771-C-A hg38:Y:4841730-C-A | ** | ||||||
| hg19:Y:4795504-C-A hg38:Y:4927463-C-A | ** | ||||||
| hg19:Y:4808945-C-A hg38:Y:4940904-C-A | ** | ||||||
| hg19:Y:4837694-G-T hg38:Y:4969653-G-T | ** | ||||||
| hg19:Y:4931559-A-G hg38:Y:5063518-A-G | ** | ||||||
| hg19:Y:4967993-G-T hg38:Y:5099952-G-T | ** | ||||||
| hg19:Y:4968224-C-A hg38:Y:5100183-C-A | ** | ||||||
| hg19:Y:5194634-A-C hg38:Y:5326593-A-C | ** | ||||||
| hg19:Y:5226415-G-T hg38:Y:5358374-G-T | ** | ||||||
| hg19:Y:5242916-C-A hg38:Y:5374875-C-A | ** | ||||||
| hg19:Y:5304896-G-T hg38:Y:5436855-G-T | ** | ||||||
| hg19:Y:5358646-C-G hg38:Y:5490605-C-G | ** | ||||||
| hg19:Y:5360042-G-A hg38:Y:5492001-G-A | ** | ||||||
| hg19:Y:5578177-G-T hg38:Y:5710136-G-T | ** | ||||||
| hg19:Y:5809107-G-A hg38:Y:5941066-G-A | ** | ||||||
| hg19:Y:6064334-G-T hg38:Y:6196293-G-T | ** | ||||||
| hg19:Y:6443710-C-A hg38:Y:6575669-C-A | ** | ||||||
| hg19:Y:7040991-C-T hg38:Y:7172950-C-T | ** | ||||||
| hg19:Y:7138497-G-A hg38:Y:7270456-G-A | Y61594 | ** | |||||
| hg19:Y:7374874-T-G hg38:Y:7506833-T-G | ** | ||||||
| hg19:Y:7416579-A-G hg38:Y:7548538-A-G | ** | ||||||
| hg19:Y:7590555-C-A hg38:Y:7722514-C-A | ** | ||||||
| hg19:Y:7590594-G-T hg38:Y:7722553-G-T | ** | ||||||
| hg19:Y:7968198-C-A hg38:Y:8100157-C-A | ** | ||||||
| hg19:Y:7990405-G-T hg38:Y:8122364-G-T | ** | ||||||
| hg19:Y:8166821-G-A hg38:Y:8298780-G-A | ** | ||||||
| hg19:Y:8325512-A-G hg38:Y:8457471-A-G | ** | ||||||
| hg19:Y:8673215-A-T hg38:Y:8805174-A-T | ** | ||||||
| hg19:Y:9971705-C-A hg38:Y:10134096-C-A | ** | ||||||
| hg19:Y:10004749-A-G hg38:Y:10167140-A-G | ** | ||||||
| hg38:Y:10660844-C-A | ** | ||||||
| hg38:Y:10666538-C-T | FT428635 | ** | |||||
| hg38:Y:10679491-T-G | ** | ||||||
| hg38:Y:10748637-T-C | ** | ||||||
| hg38:Y:10757594-C-A | ** | ||||||
| hg38:Y:10761135-T-A | ** | ||||||
| hg38:Y:10770099-G-T | ** | ||||||
| hg38:Y:10771941-C-A | ** | ||||||
| hg38:Y:10779317-C-A | ** | ||||||
| hg38:Y:10802641-T-C | ** | ||||||
| hg38:Y:10822071-C-A | ** | ||||||
| hg38:Y:10848962-C-A | ** | ||||||
| hg38:Y:10852416-C-T | ** | ||||||
| hg38:Y:10857273-A-C | ** | ||||||
| hg38:Y:10857287-C-G | ** | ||||||
| hg38:Y:10860471-C-A | ** | ||||||
| hg38:Y:10866009-T-G | ** | ||||||
| hg38:Y:10873438-C-G | ** | ||||||
| hg38:Y:10873455-C-A | ** | ||||||
| hg38:Y:10894591-C-A | ** | ||||||
| hg38:Y:10906107-G-T | ** | ||||||
| hg38:Y:10919225-G-A | ** | ||||||
| hg38:Y:10929473-G-T | ** | ||||||
| hg38:Y:10930575-C-A | ** | ||||||
| hg38:Y:10939922-C-T | ** | ||||||
| hg38:Y:10947342-C-G | ** | ||||||
| hg38:Y:10947373-C-T | ** | ||||||
| hg38:Y:10947379-A-T | ** | ||||||
| hg38:Y:10947385-T-A | ** | ||||||
| hg38:Y:10947418-C-CAATCCA | ** | ||||||
| hg38:Y:10957775-C-A | ** | ||||||
| hg38:Y:10971242-T-G | ** | ||||||
| hg38:Y:10973692-C-T | ** | ||||||
| hg38:Y:10974573-C-G | ** | ||||||
| hg38:Y:10991104-C-A | ** | ||||||
| hg38:Y:10998783-A-T | ** | ||||||
| hg38:Y:11011597-C-A | ** | ||||||
| hg19:Y:13205345-A-G hg38:Y:11049669-A-G | FT387171 | ** | |||||
| hg38:Y:11671410-C-A | DYZ17 | ** | |||||
| hg38:Y:11673422-C-T | DYZ17 | ** | |||||
| hg38:Y:11676274-A-C | DYZ17 | ** | |||||
| hg19:Y:13800816-A-T hg38:Y:11680110-A-T | DYZ17 | ** | |||||
| hg19:Y:13800836-A-T hg38:Y:11680130-A-T | DYZ17 | ** | |||||
| hg19:Y:13809359-G-C hg38:Y:11688653-G-C | DYZ17 | ** | |||||
| hg19:Y:13886833-G-A hg38:Y:11766127-G-A | ** | ||||||
| hg19:Y:13898963-T-G hg38:Y:11778257-T-G | ** | ||||||
| hg19:Y:13937234-G-T hg38:Y:11816528-G-T | ** | ||||||
| hg19:Y:13958542-T-C hg38:Y:11837836-T-C | ** | ||||||
| hg19:Y:13958549-G-A hg38:Y:11837843-G-A | ** | ||||||
| hg19:Y:13958550-C-T hg38:Y:11837844-C-T | FTB71339 | ** | |||||
| hg19:Y:13995395-G-A hg38:Y:11874689-G-A | ** | ||||||
| hg19:Y:14066966-A-T hg38:Y:11946260-A-T | ** | ||||||
| hg19:Y:14093464-C-A hg38:Y:11972758-C-A | ** | ||||||
| hg19:Y:14213253-C-A hg38:Y:12092547-C-A | ** | ||||||
| hg19:Y:14347954-C-A hg38:Y:12227249-C-A | ** | ||||||
| hg19:Y:14483479-T-C hg38:Y:12362748-T-C | ** | ||||||
| hg19:Y:14513184-C-G hg38:Y:12401389-C-G | ** | ||||||
| hg38:Y:12450519-TTGC-T | ** | ||||||
| hg19:Y:14617321-G-T hg38:Y:12505519-G-T | ** | ||||||
| hg19:Y:14719055-C-A hg38:Y:12607123-C-A | ** | ||||||
| hg19:Y:14741791-T-G hg38:Y:12629859-T-G | ** | ||||||
| hg19:Y:14788796-A-T hg38:Y:12676867-A-T | ** | ||||||
| hg19:Y:15146381-A-C hg38:Y:13034468-A-C | ** | ||||||
| hg19:Y:15201289-C-A hg38:Y:13089375-C-A | ** | ||||||
| hg19:Y:15290295-G-A hg38:Y:13178394-G-A | ** | ||||||
| hg19:Y:15320567-AAGAAGAAGGGGGAGAAGAAGGGGG-A hg38:Y:13208673-AAGAAGAAGGGGGAGAAGAAGGGGG-A | ** | ||||||
| hg19:Y:15394820-A-T hg38:Y:13282940-A-T | ** | ||||||
| hg19:Y:15592756-A-G hg38:Y:13480876-A-G | FT380729 | ** | |||||
| hg19:Y:15642866-C-A hg38:Y:13530986-C-A | ** | ||||||
| hg19:Y:15677790-T-C hg38:Y:13565910-T-C | ** | ||||||
| hg19:Y:15741461-G-T hg38:Y:13629581-G-T | ** | ||||||
| hg19:Y:15843077-C-A hg38:Y:13731197-C-A | ** | ||||||
| hg19:Y:15870685-G-A hg38:Y:13758805-G-A | ** | ||||||
| hg19:Y:16017722-G-T hg38:Y:13905842-G-T | ** | ||||||
| hg19:Y:16092600-A-C hg38:Y:13980720-A-C | ** | ||||||
| hg19:Y:16107470-T-A hg38:Y:13995590-T-A | P8_Prx | ** | |||||
| hg19:Y:16296443-G-T hg38:Y:14184563-G-T | ** | ||||||
| hg19:Y:16412892-G-T hg38:Y:14301012-G-T | ** | ||||||
| hg19:Y:16430043-G-C hg38:Y:14318163-G-C | ** | ||||||
| hg19:Y:16466028-T-C hg38:Y:14354148-T-C | ** | ||||||
| hg19:Y:16550967-G-C hg38:Y:14439087-G-C | ** | ||||||
| hg19:Y:16601491-C-A hg38:Y:14489611-C-A | ** | ||||||
| hg19:Y:16702813-T-A hg38:Y:14590933-T-A | ** | ||||||
| hg19:Y:16738143-A-C hg38:Y:14626263-A-C | ** | ||||||
| hg19:Y:16738150-G-T hg38:Y:14626270-G-T | ** | ||||||
| hg19:Y:16823932-G-T hg38:Y:14712052-G-T | ** | ||||||
| hg19:Y:16828963-C-A hg38:Y:14717083-C-A | ** | ||||||
| hg19:Y:17035050-A-T hg38:Y:14923170-A-T | ** | ||||||
| hg19:Y:17036822-C-A hg38:Y:14924942-C-A | ** | ||||||
| hg19:Y:17257261-C-A hg38:Y:15145381-C-A | ** | ||||||
| hg19:Y:17355838-C-A hg38:Y:15243958-C-A | ** | ||||||
| hg19:Y:17667044-C-A hg38:Y:15555164-C-A | ** | ||||||
| hg19:Y:17692101-A-T hg38:Y:15580221-A-T | ** | ||||||
| hg19:Y:17730340-C-A hg38:Y:15618460-C-A | ** | ||||||
| hg19:Y:17871863-C-A hg38:Y:15759983-C-A | ** | ||||||
| hg19:Y:18108666-G-C hg38:Y:15996786-G-C | ** | ||||||
| hg19:Y:18401279-C-A hg38:Y:16289399-C-A | P6_Gap | ** | |||||
| hg19:Y:18908082-A-G hg38:Y:16796202-A-G | FT305822 | 14×TG | ** | ||||
| hg19:Y:18972823-C-A hg38:Y:16860943-C-A | ** | ||||||
| hg19:Y:19075429-C-A hg38:Y:16963549-C-A | ** | ||||||
| hg19:Y:19586731-G-A hg38:Y:17474851-G-A | P5_Prx | ** | |||||
| hg19:Y:19847635-T-TG hg38:Y:17735755-T-TG | P5_Prx | ** | |||||
| hg19:Y:19909272-G-T hg38:Y:17797392-G-T | P5_Prx | ** | |||||
| hg19:Y:19931216-A-T hg38:Y:17819336-A-T | P5_Prx | ** | |||||
| hg19:Y:20050838-C-T hg38:Y:17938958-C-T | P5_Prx | ** | |||||
| hg19:Y:20350054-G-T hg38:Y:18188168-G-T | P5_Dst | ** | |||||
| hg19:Y:20430442-C-A hg38:Y:18268556-C-A | P5_Dst | 22×A | ** | ||||
| hg19:Y:20825500-C-A hg38:Y:18663614-C-A | P4_Gap | ** | |||||
| hg19:Y:20840866-C-A hg38:Y:18678980-C-A | P4_Gap | ** | |||||
| hg19:Y:20865554-G-T hg38:Y:18703668-G-T | P4_Dst | ** | |||||
| hg19:Y:21002536-T-C hg38:Y:18840650-T-C | P4_Dst | ** | |||||
| hg19:Y:21125685-T-G hg38:Y:18963799-T-G | FT112023 | ** | |||||
| hg19:Y:21464601-A-C hg38:Y:19302715-A-C | ** | ||||||
| hg19:Y:21551484-A-C hg38:Y:19389598-A-C | ** | ||||||
| hg19:Y:21551496-T-A hg38:Y:19389610-T-A | ** | ||||||
| hg19:Y:21551507-A-T hg38:Y:19389621-A-T | ** | ||||||
| hg19:Y:21551534-A-T hg38:Y:19389648-A-T | ** | ||||||
| hg19:Y:21832038-A-G hg38:Y:19670152-A-G | ** | ||||||
| hg19:Y:22044063-C-A hg38:Y:19882177-C-A | ** | ||||||
| hg19:Y:22060392-G-A hg38:Y:19898506-G-A | ** | ||||||
| hg19:Y:22172876-C-A hg38:Y:20010990-C-A | ** | ||||||
| hg19:Y:22526291-C-T hg38:Y:20364405-C-T | FT421207 | ** | |||||
| hg19:Y:22779402-C-A hg38:Y:20617516-C-A | ** | ||||||
| hg19:Y:22811120-C-A hg38:Y:20649234-C-A | ** | ||||||
| hg19:Y:23007409-G-T hg38:Y:20845523-G-T | ** | ||||||
| hg19:Y:23136955-G-T hg38:Y:20975069-G-T | ** | ||||||
| hg19:Y:23290649-C-A hg38:Y:21128763-C-A | ** | ||||||
| hg19:Y:23442530-C-A hg38:Y:21280644-C-A | ** | ||||||
| hg19:Y:23442554-A-G hg38:Y:21280668-A-G | ** | ||||||
| hg38:Y:21750944-C-A | ** | ||||||
| hg38:Y:21751133-A-G | ** | ||||||
| hg19:Y:23952607-T-A hg38:Y:21806460-T-A | ** | ||||||
| hg19:Y:23952685-A-C hg38:Y:21806538-A-C | ** | ||||||
| hg19:Y:24296358-A-AT hg38:Y:22150211-A-AT | P3_t1 | ** | |||||
| hg19:Y:24475246-G-A hg38:Y:22329099-G-A | ** | ||||||
| hg19:Y:25967729-T-A hg38:Y:23821582-T-A | P1_Y1 | ** | |||||
| hg19:Y:25967746-T-A hg38:Y:23821599-T-A | P1_Y1 | ** | |||||
| hg19:Y:26386370-C-A hg38:Y:24240223-C-A | P1_Y1 | ** | |||||
| hg19:Y:28605935-C-A hg38:Y:26459788-C-A | ** | ||||||
| hg19:Y:28673644-C-A hg38:Y:26527497-C-A | ** | ||||||
| hg19:Y:28724131-G-T hg38:Y:26577984-G-T | ** | ||||||
| hg19:Y:28731334-CT-C hg38:Y:26585187-CT-C | ** | ||||||
| hg38:Y:56674454-G-T | ** | ||||||
| hg38:Y:56674470-G-T | ** | ||||||
| hg38:Y:56674480-T-A | ** | ||||||
| hg38:Y:56674491-G-A | ** | ||||||
| hg38:Y:56674504-G-T | ** | ||||||
| hg38:Y:56861633-G-T | ** | ||||||
| hg19:Y:23437943-C-CTA hg38:Y:21276057-C-CTA | *** | ||||||
| hg19:Y:22228797-A-T hg38:Y:20066911-A-T | DYZ19 | *** | |||||
| hg19:Y:13460252-C-A hg38:Y:11304576-C-A | *** | ||||||
| hg19:Y:13460272-C-G hg38:Y:11304596-C-G | *** | ||||||
| hg38:Y:10661654-C-A | *** | ||||||
| hg38:Y:10796696-C-A | *** | ||||||
| hg19:Y:13642437-C-A hg38:Y:11486761-C-A | *** | ||||||
| hg19:Y:9945422-G-T hg38:Y:10107813-G-T | *** | ||||||
| hg38:Y:11000450-T-G | *** | ||||||
| hg19:Y:23415298-ATG-A,AG hg38:Y:21253412-ATG-A,AG | *** | ||||||
| hg19:Y:4502942-G-T hg38:Y:4634901-G-T | FT308203 | *** | |||||
| hg19:Y:16270830-G-T hg38:Y:14158950-G-T | *** | ||||||
| hg19:Y:22802868-ATTTTTTTT-A hg38:Y:20640982-ATTTTTTTT-A | 32×T | *** | |||||
| hg19:Y:2948034-C-A hg38:Y:3079993-C-A | *** | ||||||
| hg19:Y:3790838-G-GTATA hg38:Y:3922797-G-GTATA | 8×TA | *** | |||||
| hg19:Y:8666723-GTT-G,G hg38:Y:8798682-GTT-G,G | 25×T | *** | |||||
| hg19:Y:9427697-G-A hg38:Y:9590088-G-A | *** | ||||||
| hg38:Y:10749885-C-A | *** | ||||||
| hg38:Y:10803416-C-A | *** | ||||||
| hg38:Y:10958503-T-TTCTAA,TTCTGT | *** | ||||||
| hg19:Y:13433391-T-A hg38:Y:11277715-T-A | *** | ||||||
| hg19:Y:15991806-GTT-G,GT hg38:Y:13879926-GTT-G,GT | 24×T | *** | |||||
| hg19:Y:21802601-C-A hg38:Y:19640715-C-A | *** | ||||||
| hg19:Y:22228933-A-G hg38:Y:20067047-A-G | DYZ19 | *** | |||||
| hg19:Y:22228938-C-G hg38:Y:20067052-C-G | DYZ19 | *** | |||||
| hg19:Y:22228944-G-A hg38:Y:20067058-G-A | DYZ19 | *** | |||||
| hg19:Y:22238365-G-T hg38:Y:20076479-G-T | DYZ19 | *** | |||||
| hg19:Y:22522358-C-A hg38:Y:20360472-C-A | *** | ||||||
| hg19:Y:28549886-G-C hg38:Y:26403739-G-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 506871 | 9682539 | 7896550 | 7787714 |
| Used in age calculations | 9682539 | 7896550 | 7787714 |
| Counts of SNPs | 13 | 13 |
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