Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > DF21/S192 > S5488 > Z16294 > BY11121 > ZZ21 > BY3827 > BY18887 > BY35673 > Y134084

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
638486
FGC2
DN8HQ
28782996-C-T 26636849-C-T Y134078 ++
3718012-C-T 3849971-C-T *
15188-G-T *
7717737-CTTCTTTCT-C 7849696-CTTCTTTCT-C 13×TTCT**
13299500-T-C 11143824-T-C **
7337789-C-A 7469748-C-A **
9940969-C-T 10103360-C-T FGC50436 **
13269858-G-T 11114182-G-T **
58996968-G-A 56850821-G-A FGC78211 **
58996994-C-A 56850847-C-A **
9117010-C-A 9279401-C-A **
28530679-GA-G 26384532-GA-G 10×A**
17524187-C-A 15412307-C-A *****
17584297-C-A 15472417-C-A **
10951717-CTCCAT-C *****
19465514-C-A 17353634-C-A *****
14264415-C-A 12143709-C-A *****
15477719-C-A 13365839-C-A **
8281847-C-A 8413806-C-A *****
10880274-T-C **
9934996-C-A 10097387-C-A **
9666554-G-T 9828945-G-T IR3_Prx ****
7464075-G-T 7596034-G-T IR1_L **
11000426-T-TCATGAAACC **
18687647-C-A 16575767-C-A **
10755016-C-A *****
10956604-C-A **
10760037-A-T **
4352800-C-A 4484759-C-A *****
5191285-C-A 5323244-C-A **
56828169-G-T **
5449907-G-T 5581866-G-T **
10861145-C-A ****
11033888-A-T **
11030094-CAGTCA-C **
10671572-C-A **
10671581-A-G **
10972124-C-A **
10956583-C-A **
10956591-T-A **
10956594-CA-C **
15773394-C-A 13661514-C-A *****
26003048-T-TC 23856901-T-TC P1_Y1 **
10999875-A-T **
10927256-T-G **
7086857-C-A 7218816-C-A *****
15532502-C-A 13420622-C-A *****
13487782-C-G 11332106-C-G **
23199224-C-A 21037338-C-A *****
19670773-T-TCC 17558893-T-TCC P5_Prx **
10974740-C-CTCCAA **
5200287-G-T 5332246-G-T *****
7371762-C-A 7503721-C-A ****
21315016-C-A 19153130-C-A **
28776156-C-A 26630009-C-A *****
3627508-C-A 3759467-C-A *****
17588601-C-A 15476721-C-A **
11004455-C-T **
22590472-C-A 20428586-C-A **
11030117-T-G **
9055457-C-A 9217848-C-A *****
7091407-C-A 7223366-C-A *****
19059797-C-A 16947917-C-A **
10883090-G-T **
13463863-G-T 11308187-G-T **
13463873-G-T 11308197-G-T **
13463877-G-A 11308201-G-A **
11643711-A-T DYZ17 **
7243-A-C **
15252785-G-T 13140871-G-T **
15921964-G-T 13810084-G-T *****
10926713-C-G **
10894825-G-T ****
13217590-C-A 11061914-C-A **
11027277-A-T **
10657410-C-A FT428317 **
13460976-T-A 11305300-T-A **
22011633-C-A 19849747-C-A **
10977023-A-AATTCC **
9508492-C-A 9670883-C-A **
14379465-C-A 12258761-C-A **
22793970-C-A 20632084-C-A *****
13215462-C-A 11059786-C-A *****
14073968-C-A 11953262-C-A **
19448361-C-A 17336481-C-A *****
16048017-C-A 13936137-C-A **
56851622-A-C *****
10986431-C-A *****
8344270-G-T 8476229-G-T *****
11674931-C-T DYZ17 ****
9063877-A-T 9226268-A-T **
21154062-C-A 18992176-C-A **
10889799-C-G **
7474417-AAG-A 7606376-AAG-A IR1_L **
19448412-C-A 17336532-C-A *****
18772508-C-A 16660628-C-A *****
22517099-C-A 20355213-C-A *****
7131365-C-A 7263324-C-A **
13408258-C-T 11252582-C-T **
22601962-C-A 20440076-C-A *****
5560626-C-A 5692585-C-A *****
22810153-C-A 20648267-C-A *****
11001801-C-A *****
10755277-G-A **
10958851-C-A *****
11004456-A-G **
10764862-C-A **
15530013-C-A 13418133-C-A *****
15320524-AAAGAAG-A 13208630-AAAGAAG-A 9×AAG**
17224298-C-A 15112418-C-A *****
14046628-C-A 11925922-C-A *****
13461021-C-T 11305345-C-T **
21357496-GA-G 19195610-GA-G 9×A**
10693366-C-A **
2759153-C-A 2891112-C-A **
2814793-C-A 2946752-C-A *****
2857881-C-A 2989840-C-A *****
3116646-C-A 3248605-C-A ****
3164572-C-G 3296531-C-G **
3274801-C-A 3406760-C-A *****
3285007-G-T 3416966-G-T **
3599522-C-A 3731481-C-A *****
3602115-C-A 3734074-C-A ****
3876957-C-A 4008916-C-A **
3961422-CA-C 4093381-CA-C **
4064079-C-A 4196038-C-A FT381951 *****
4108168-C-A 4240127-C-A *****
4223383-G-T 4355342-G-T **
4273705-C-A 4405664-C-A ****
4388767-G-T 4520726-G-T **
4604396-A-G 4736355-A-G **
4740511-C-A 4872470-C-A *****
5358612-C-A 5490571-C-A *****
5799918-A-C 5931877-A-C *****
5808641-G-T 5940600-G-T *****
5836421-C-A 5968380-C-A **
5981084-A-C 6113043-A-C **
5997516-C-A 6129475-C-A ****
6699578-C-A 6831537-C-A **
6748007-G-A 6879966-G-A *****
6856588-C-A 6988547-C-A *****
6856590-A-C 6988549-A-C *****
6977457-G-T 7109416-G-T *****
7695682-C-A 7827641-C-A *****
7832312-G-C 7964271-G-C *****
7925360-A-T 8057319-A-T *****
7970989-A-G 8102948-A-G **
8069944-C-A 8201903-C-A *****
8100463-C-G 8232422-C-G *****
8151622-T-G 8283581-T-G *****
8344207-T-G 8476166-T-G **
9183620-C-A 9346011-C-A **
9385172-C-A 9547563-C-A **
9702954-C-A 9865345-C-A IR3_Prx *****
9764298-A-C 9926689-A-C **
9900453-C-A 10062844-C-A *****
10653052-C-A **
10693363-T-C **
10693369-C-T **
10744599-C-A *****
10757260-ACC-A *****
10764538-CCATGCCATTTT-C **
10764854-T-G *****
10771476-C-A ****
10780967-C-A ****
10812316-C-A *****
10844342-C-A ****
10861727-G-T ****
10863165-C-A *****
10889790-C-CTTTCA **
10889805-C-A **
10911223-C-A ****
10914568-G-T **
10926802-C-A *****
10927216-T-TCCAGG **
10937318-T-C *****
10944895-T-A **
10950715-C-A *****
10958351-T-TCTAC **
10989931-C-A *****
10999864-C-A **
11010683-C-A *****
11030079-C-G **
11030136-C-G **
13445823-C-G 11290147-C-G **
13481923-T-C 11326247-T-C **
13486542-C-A 11330866-C-A **
13523810-T-G 11368134-T-G **
13604412-C-A 11448736-C-A *****
13624248-C-A 11468572-C-A *****
13625281-C-A 11469605-C-A **
11670622-C-A DYZ17 ****
13847483-C-G 11726777-C-G DYZ17 *****
14031710-C-A 11911004-C-A *****
14042714-T-C 11922008-T-C *****
14135530-G-T 12014824-G-T *****
14175078-A-G 12054372-A-G *****
14255085-C-A 12134379-C-A *****
14401941-G-T 12281238-G-T **
14465448-C-A 12344721-C-A *****
14674272-C-A 12562338-C-A ****
14696805-C-A 12584871-C-A *****
14723876-G-T 12611944-G-T *****
14959514-C-A 12847589-C-A **
15183987-C-A 13072073-C-A ****
15211031-G-T 13099117-G-T *****
15449907-T-A 13338027-T-A **
15496848-C-A 13384968-C-A *****
16019101-G-T 13907221-G-T *****
16050463-T-A 13938583-T-A **
16324180-ATGGCAC-A 14212300-ATGGCAC-A **
16344507-C-A 14232627-C-A **
16344555-T-A 14232675-T-A 6×TCC**
16666170-T-C 14554290-T-C *****
16673068-C-A 14561188-C-A *****
16679243-G-A 14567363-G-A **
17032748-T-C 14920868-T-C *****
17123528-G-T 15011648-G-T *****
17366803-G-T 15254923-G-T *****
17366850-G-T 15254970-G-T *****
17537949-A-C 15426069-A-C *****
17600414-C-A 15488534-C-A *****
17812020-C-A 15700140-C-A *****
18144167-AC-A 16032287-AC-A **
18159054-C-T 16047174-C-T **
18188616-C-A 16076736-C-A *****
18192298-G-T 16080418-G-T **
18391844-C-A 16279964-C-A P6_Gap **
18647715-C-A 16535835-C-A ****
18838430-T-C 16726550-T-C **
18838431-G-T 16726551-G-T **
18973156-ATTATTG-A 16861276-ATTATTG-A **
19299176-C-A 17187296-C-A *****
19413351-G-A 17301471-G-A *****
19531462-C-A 17419582-C-A *****
20330476-A-T 18168590-A-T P5_Dst *****
20675844-C-A 18513958-C-A P4_Prx **
21211883-G-T 19049997-G-T *****
21283594-C-A 19121708-C-A **
21368359-C-A 19206473-C-A **
21608077-AAC-A 19446191-AAC-A **
22081115-C-A 19919229-C-A *****
22092675-T-G 19930789-T-G *****
22166608-C-T 20004722-C-T **
22166609-A-G 20004723-A-G **
22211233-C-A 20049347-C-A ****
22211238-C-A 20049352-C-A **
22330298-C-G 20168412-C-G DYZ19 *****
22521070-C-A 20359184-C-A **
22770458-C-A 20608572-C-A *****
22880070-C-A 20718184-C-A ****
23120670-T-C 20958784-T-C **
23190366-G-T 21028480-G-T *****
23343706-G-A 21181820-G-A **
23343711-C-A 21181825-C-A **
23498128-G-T 21336242-G-T **
23576581-C-A 21414695-C-A *****
23768850-A-T 21606964-A-T *****
21754953-A-G ****
24406899-T-C 22260752-T-C FT225202 **
24513350-G-T 22367203-G-T **
24576024-C-A 22429877-C-A P3_t2 **
27398510-C-CAAA 25252363-C-CAAA P1_g3 23×A**
27636260-T-G 25490113-T-G P1_Y2 **
28548499-C-A 26402352-C-A **
28583631-T-A 26437484-T-A **
28587209-C-A 26441062-C-A **
28763747-C-A 26617600-C-A *****
28764867-C-A 26618720-C-A *****
28798693-G-T 26652546-G-T *****
56736182-C-T **
56830120-C-A **
56848416-C-A *****
56849120-C-A **
34242-G-A **
56850846-T-C **
10655053-C-A **
7199-T-C **
16381-T-G **
16387-G-T **
23067-A-G **
23078-G-T FGC82936 **
23100-G-A **
23115-A-G **
10967573-C-G **
10979561-T-C **
13446595-C-T 11290919-C-T **
22248395-A-C 20086509-A-C DYZ19 **
22502217-G-C 20340331-G-C DYZ19 ***
58980937-C-CATTCCATTCCACTCCACTCCATTCA 56834790-C-CATTCCATTCCACTCCACTCCATTCA ***
22295038-T-A 20133152-T-A DYZ19 ***
22295041-T-A 20133155-T-A DYZ19 ***
27409365-G-A 25263218-G-A P1_g3 ***
58969460-C-T 56823313-C-T ***
58969461-A-T 56823314-A-T ***
58823417-ATTCCATTGGATTACT-A 56767431-GAATGGAAAGTAATCC-G ***
22266049-G-T 20104163-G-T DYZ19 ***
58846649-G-T 56744222-C-A ***
58846515-C-T 56744356-G-A ***
8184343-T-TGC 8316302-T-TGC ***
22234512-C-A 20072626-C-A DYZ19 ***
28818256-CAAATCA-GAAACCG 26672109-CAAATCA-GAAACCG ***
15491941-GTATATA-G 13380061-GTATATA-G 19×TA***
22355162-T-G 20193276-T-G DYZ19 ***
13746822-T-A 11591146-T-A DYZ17 ***
13746829-A-G 11591153-A-G DYZ17 ***
22293156-G-T 20131270-G-T DYZ19 ***
22457290-G-C 20295404-G-C DYZ19 ***
13803371-AGGAG-TGGAA 11682665-AGGAG-TGGAA DYZ17 ***
58876451-A-T 56714420-T-A ***
7076642-T-A 7208601-T-A FT52917 ***
7076644-C-A 7208603-C-A ***
18937652-A-G 16825772-A-G M12055 ***
19312777-T-G 17200897-T-G ***
58974456-AAATCA-TATTCC 56828309-AAATCA-TATTCC ***
58846526-T-C 56744345-A-G ***
58846586-ATTCG-GTTCA 56744281-CGAAT-TGAAC ***
58823383-CTCTATC-TTCCATT 56767482-GATAGAG-AATGGAA ***
58978989-G-GCCACTCCATT 56832842-G-GCCACTCCATT ***
22502206-G-T 20340320-G-T DYZ19 ***
9977485-T-C 10139876-T-C ***
14261751-T-G 12141045-T-G ***
21382075-G-T 19220189-G-T FT202312 ***
13803323-CAAA-TGAT 11682617-CAAA-TGAT DYZ17 ***
13803332-TGAC-AGAT 11682626-TGAC-AGAT DYZ17 ***
13803340-CTGTA-ATGTT 11682634-CTGTA-ATGTT DYZ17 ***
58973373-ACAC-CCAT 56827226-ACAC-CCAT ***
22293252-C-A 20131366-C-A DYZ19 ***
6402562-ATTATATTTGTA-GTTACATTCGTT 6534521-ATTATATTTGTA-GTTACATTCGTT ***
59007965-A-C 56861818-A-C ***
58866884-C-G 56723987-G-C ***
58840792-CTT-ATC 56750077-AAG-GAT ***
22334672-G-T 20172786-G-T DYZ19 ***
58829306-T-C 56761565-A-G ***
22272937-TAG-T 20111051-TAG-T DYZ19 ***
22322194-G-T 20160308-G-T DYZ19 ***
58868971-C-T 56721900-G-A ***
58868976-C-T 56721895-G-A ***
22295038-TCTT-ACTA 20133152-TCTT-ACTA DYZ19 ***
22311154-C-G 20149268-C-G DYZ19 ***
22457211-G-C 20295325-G-C DYZ19 ***
24425342-T-TGCAG 22279195-T-TGCAG ***
13707692-TGC-GGA 11552016-TGC-GGA DYZ17 ***
58865707-C-G 56725164-G-C ***
22360196-C-T 20198310-C-T DYZ19 ***
13460464-AAGCAA-CAGAGG 11304788-AAGCAA-CAGAGG ***
22367580-A-C 20205694-A-C DYZ19 ***
58982819-CAAGC-TGAGG 56836672-CAAGC-TGAGG ***
18965642-CTTTTTT-C 16853762-CTTTTTT-C 19×T***
9349864-C-G 9512255-C-G ***
22367262-G-C 20205376-G-C DYZ19 ***
22481328-TTTAGG-GTTATT 20319442-TTTAGG-GTTATT DYZ19 ***
22293119-A-C 20131233-A-C DYZ19 ***
22293139-C-T 20131253-C-T DYZ19 ***
7717741-TTTCT-CTTCC 7849700-TTTCT-CTTCC ***
19377072-C-A 17265192-C-A ***
22342956-C-A 20181070-C-A DYZ19 ***
22341323-C-G 20179437-C-G DYZ19 ***
22457269-A-T 20295383-A-T DYZ19 ***
28315957-C-A 26169810-C-A P1_b4 ***
58980759-CCACTCCATTCCATTCCATTT-C 56834612-CCACTCCATTCCATTCCATTT-C ***
27167711-C-A 25021564-C-A P1_g3 ***
58973093-G-GCATTC 56826946-G-GCATTC ***
3640536-CTTCC-TTTCT 3772495-CTTCC-TTTCT ***
13811175-A-T 11690469-A-T DYZ17 ***
10745033-C-A ***
10761013-G-T ***
16505978-C-A 14394098-C-A ***
11010246-A-C ***
10788199-C-T ***
10789539-G-C ***
11025536-T-C ***
13894206-A-C 11773500-A-C ***
11010223-A-G ***
13487753-A-C 11332077-A-C ***
10764529-C-T ***
56839992-G-C ***
23393304-C-CA 21231418-C-CA 9×A***
13992191-CAAAAAA-C 11871485-CAAAAAA-C 22×A******
28798683-G-T 26652536-G-T ***
28798684-G-C 26652537-G-C ***
10997208-G-T ***
10861450-A-T ***
10759789-C-G ***
14529234-CAA-C,CA 12417435-CAA-C,CA 15×A***
22658914-C-A 20497028-C-A ***
13499276-T-C 11343600-T-C ***
7254583-C-A 7386542-C-A ***
17632569-A-T 15520689-A-T ***
11025525-A-C ***
11025541-T-A ***
7202021-C-A 7333980-C-A ***
10971132-T-C ***
10657429-T-C ***
17994802-C-A 15882922-C-A P7_Prx ***
13919520-C-A 11798814-C-A ***
9191060-G-T 9353451-G-T ***
10867560-T-C ***
24673081-G-C 22526934-G-C P3_b2 ***
23742227-G-T 21580341-G-T ***
3439998-C-A 3571957-C-A ***
10795081-C-T ***
17046743-G-T 14934863-G-T ***
10751696-T-C ***
10789536-T-C ***
11676326-T-G DYZ17 ***
10748249-C-T ***
14218-G-C ***
14219-T-A ***
28795713-A-AC 26649566-A-AC ***
18007577-G-T 15895697-G-T P7_Gap ***
11016502-T-C ***
10948348-C-A ***
14959576-T-A 12847651-T-A ***
19377069-C-A 17265189-C-A ***
10969470-C-T FT92138 ***
13801482-T-A 11680776-T-A DYZ17 ***
13236783-C-A 11081107-C-A ***
10761781-C-G ***
10834183-C-T ***
15881884-A-C 13770004-A-C ***
10758904-C-A ***
56753978-T-C ***
14300504-C-A 12179798-C-A ***
28773759-C-A 26627612-C-A FT461486 ***
4788559-C-A 4920518-C-A ***
10969458-G-A ***
27390-G-T ***
10873115-T-A ***
10924397-C-T ***
16086090-C-A 13974210-C-A ***
15864145-C-A 13752265-C-A ***
27637261-C-A 25491114-C-A P1_Y2 ***
10958281-T-C ***
15816396-C-A 13704516-C-A ***
10777686-T-C ***
10914521-A-C ***
7659798-C-A 7791757-C-A ***
56851607-C-A ***
26526415-C-A 24380268-C-A P1_Y1 ***
13523570-C-A 11367894-C-A ***
11034779-T-A ***
10795911-C-A ***
10873114-A-C ***
16860796-G-T 14748916-G-T ***
13588187-C-A 11432511-C-A ***
10799587-C-A ***
10885192-C-T ***
10958343-C-A ***
10889373-A-C ***
24904739-G-T 22758592-G-T g1 ***
10668340-C-A ***
11034761-G-C ***
16440523-AT-A 14328643-AT-A 9×T***
23037939-T-G 20876053-T-G ***
10958338-C-A ***
22367532-A-C 20205646-A-C DYZ19 ***
28500786-C-A 26354639-C-A ***
10685836-A-C ***
13481920-G-T 11326244-G-T ***
7076655-T-A 7208614-T-A ***
10761004-A-T ***
10998428-T-G ***
21920758-C-A 19758872-C-A ***
3834828-C-A 3966787-C-A ***
6434969-T-A 6566928-T-A ***
6882683-AGAATTTGTTT-A 7014642-AGAATTTGTTT-A ***
8142970-C-A 8274929-C-A ***
8181175-ATTTTTTTTTTTTTTTTTTTTTT-A,AT 8313134-ATTTTTTTTTTTTTTTTTTTTTT-A,AT 38×T***
10657378-T-A ***
10657379-C-G ***
10692154-C-A ***
10764509-C-CAATAGGGTTG ***
10764513-C-T ***
10988597-T-A ***
13842670-A-ATCAACTCGAT 11721964-A-ATCAACTCGAT DYZ17 ***
13842716-T-TGCAGG 11722010-T-TGCAGG DYZ17 ***
13842741-T-C 11722035-T-C DYZ17 ***
14370766-C-A 12250062-C-A ***
15097888-C-A 12985976-C-A ***
15254289-C-A 13142375-C-A ***
15399505-C-A 13287625-C-A BY101302 ***
15865699-C-A 13753819-C-A ***
15951119-C-A 13839239-C-A ***
16529755-C-A 14417875-C-A ***
16834095-C-A 14722215-C-A ***
17141709-CAAA-C,CAAAA 15029829-CAAA-C,CAAAA 21×A***
17408991-C-A 15297111-C-A ***
21117259-C-CAA 18955373-C-CAA 14×A***
21756858-C-A 19594972-C-A ***
21774026-G-A 19612140-G-A ***
21929598-GTGTATATATA-G 19767712-GTGTATATATA-G ***
22189279-C-A 20027393-C-A ***
22508737-A-T 20346851-A-T DYZ19 ***
22526196-C-A 20364310-C-A ***
22696654-CA-C 20534768-CA-C ***
24517797-C-A 22371650-C-A ***
11023057-C-A ***
11011668-A-T ***
10751651-C-A ***
10840402-C-A ***
10947289-G-T ***
10765777-T-C ***
10873355-C-T ***
15061688-A-T 12949780-A-T ***
10777057-T-C ***
10777063-C-T ***
23205402-C-A 21043516-C-A FT119672 ***
10914535-A-G ***
13819004-G-GATGGAATGGAATGGA 11698298-G-GATGGAATGGAATGGA DYZ17 11×ATGGA***
58836937-C-A 56753934-G-T ***
10862315-C-A ***
10646051-ACCATT-A ***
10744351-TGCAGA-CCCAGG ***
10980633-GAGT-CAGG ***
13661293-A-ATGGAC 11505617-A-ATGGAC DYZ17 ***
22361245-G-T 20199359-G-T FGC80147 DYZ19 ***
11021308-TT-AC ***
56861817-AAAAAAAAAA-CAAACAAACAAAC ***
22498356-T-G 20336470-T-G DYZ19 ***
10655065-A-T ***
10972680-C-A ***
15743251-C-A 13631371-C-A ***
13433205-T-C 11277529-T-C FT443638 ***
17210952-C-A 15099072-C-A ***
10795896-C-T ***
10990166-C-T ***
17994810-C-T 15882930-C-T P7_Prx ***
13460712-C-A 11305036-C-A ***
13460708-G-C 11305032-G-C ***
13460702-A-T 11305026-A-T ***
7196-G-A ***
7201-G-C ***
7636-T-C ***
7694-A-T ***
9072-G-T ***
9075-T-A ***
9132-G-T ***
9166-C-A ***
12431-A-T ***
12505-C-G ***
12530-C-T ***
12535-C-A ***
12660-A-C ***
12667-G-T ***
12689-G-C ***
12696-G-C ***
12739-C-T ***
15299-C-T ***
15442-C-A ***
16211-G-T ***
16222-C-T ***
16234-T-G ***
16395-C-G ***
16409-G-C ***
17979-A-C ***
17996-A-G ***
18004-C-G ***
18500-G-A ***
18523-T-C ***
21093-A-T ***
22954-T-G ***
22955-T-G ***
22976-A-G ***
22981-T-C ***
27312-C-A ***
27336-T-C ***
27353-A-C ***
27415-A-G ***
28135-T-G ***
28163-T-C ***
28166-A-T ***
28169-T-G ***
28173-T-G ***
28239-A-C ***
29764-T-G ***
29869-T-A ***
31807-G-T ***
2767696-A-T 2899655-A-T ***
3235576-C-A 3367535-C-A ***
4735276-C-A 4867235-C-A ***
5213243-G-T 5345202-G-T ***
6062067-C-A 6194026-C-A ***
6120111-T-G 6252070-T-G ***
6133868-A-T 6265827-A-T ***
6142475-C-A 6274434-C-A IR3_Dst ***
6201793-G-T 6333752-G-T IR3_Dst ***
6227006-T-C 6358965-T-C IR3_Dst ***
6365121-G-T 6497080-G-T ***
7076651-T-A 7208610-T-A ***
7216618-A-G 7348577-A-G ***
7236430-A-C 7368389-A-C ***
7497325-G-C 7629284-G-C IR1_L ***
7990917-T-C 8122876-T-C ***
8008000-T-C 8139959-T-C ***
8369534-T-A 8501493-T-A ***
8788859-C-A 8920818-C-A ***
9306795-C-A 9469186-C-A ***
9320671-T-C 9483062-T-C ***
9322157-C-A 9484548-C-A ***
9654484-A-G 9816875-A-G IR3_Prx ***
9736248-G-T 9898639-G-T IR3_Prx ***
9945046-A-C 10107437-A-C ***
9945104-A-C 10107495-A-C ***
9945126-T-G 10107517-T-G ***
10016082-A-T 10178473-A-T ***
10032241-T-G 10194632-T-G ***
10647255-C-A ***
10649143-A-T ***
10654388-A-G ***
10668140-T-G ***
10668488-C-T ***
10688819-C-A ***
10751658-T-G ***
10751692-T-G ***
10751713-G-A ***
10759776-A-T ***
10761160-T-G ***
10765455-T-G ***
10765485-T-G ***
10768582-C-A ***
10777061-T-A ***
10787437-A-C ***
10787447-T-G ***
10788912-C-A ***
10795893-T-A ***
10820543-G-T ***
10834116-A-T ***
10834125-T-A ***
10834145-C-A ***
10834155-G-A ***
10834166-C-A ***
10839012-T-C ***
10866105-T-G ***
10873214-A-T ***
10887492-C-A ***
10914518-C-T ***
10926546-T-G ***
10935527-C-T ***
10936298-A-G ***
10942309-C-A ***
10944551-T-A ***
10944577-T-G ***
10944578-C-G ***
10944590-A-T ***
10945216-A-G ***
10945217-A-G ***
10947807-A-T ***
10947841-C-G ***
10948353-T-G ***
10956525-A-T ***
10965692-G-A ***
10973553-A-G ***
10985056-T-G ***
10997089-C-A FT230087 ***
11003904-T-C ***
11003909-G-T ***
11009314-T-G ***
11010222-A-T ***
11010284-C-A ***
11023049-C-T ***
11023067-A-T ***
11023073-A-T ***
11023082-C-T ***
11033705-C-G ***
13222465-G-A 11066789-G-A ***
13268981-G-A 11113305-G-A ***
13310892-T-G 11155216-T-G ***
13460685-C-G 11305009-C-G ***
13460721-T-A 11305045-T-A ***
13474779-T-A 11319103-T-A ***
13480768-G-T 11325092-G-T ***
13480769-C-G 11325093-C-G ***
13480770-C-T 11325094-C-T ***
13499311-T-C 11343635-T-C ***
13499445-A-C 11343769-A-C ***
13499484-T-C 11343808-T-C ***
13620800-C-A 11465124-C-A ***
13701154-G-T 11545478-G-T DYZ17 ***
13708660-C-G 11552984-C-G DYZ17 ***
13729015-A-C 11573339-A-C DYZ17 ***
13739810-T-C 11584134-T-C DYZ17 ***
13746762-G-A 11591086-G-A DYZ17 ***
13746765-G-T 11591089-G-T DYZ17 ***
13746797-A-T 11591121-A-T DYZ17 ***
13945274-A-C 11824568-A-C ***
13968001-C-A 11847295-C-A ***
14313550-C-A 12192844-C-A ***
14416622-T-G 12295919-T-G ***
14495763-A-T 12383960-A-T ***
14516861-T-G 12405062-T-G ***
14522284-C-A 12410485-C-A ***
14718563-A-C 12606631-A-C ***
14959538-A-C 12847613-A-C ***
14959552-C-G 12847627-C-G ***
15247708-C-A 13135794-C-A ***
15420111-G-T 13308231-G-T ***
15420120-G-T 13308240-G-T ***
15688953-A-T 13577073-A-T ***
15789222-G-A 13677342-G-A ***
15927012-C-A 13815132-C-A ***
16006122-A-C 13894242-A-C ***
16290839-G-T 14178959-G-T ***
16476423-C-A 14364543-C-A ***
16612620-C-T 14500740-C-T 8×T***
16621896-C-A 14510016-C-A ***
17323528-G-T 15211648-G-T ***
17757706-T-A 15645826-T-A ***
17757717-T-A 15645837-T-A ***
17834394-T-C 15722514-T-C ***
17994806-A-G 15882926-A-G P7_Prx ***
17994821-T-C 15882941-T-C P7_Prx ***
18037842-G-A 15925962-G-A ***
18188341-G-C 16076461-G-C ***
18976736-T-C 16864856-T-C ***
19040686-G-T 16928806-G-T ***
19044612-A-C 16932732-A-C ***
19411884-A-C 17300004-A-C ***
19619514-A-G 17507634-A-G P5_Prx ***
19663424-G-T 17551544-G-T P5_Prx ***
19770666-C-A 17658786-C-A P5_Prx ***
19985929-C-A 17874049-C-A P5_Prx ***
20473492-A-T 18311606-A-T P5_Dst ***
20473493-T-G 18311607-T-G P5_Dst ***
20931522-G-T 18769636-G-T P4_Dst ***
20947296-T-C 18785410-T-C P4_Dst ***
21241740-C-A 19079854-C-A ***
21920751-T-G 19758865-T-G ***
21954466-G-A 19792580-G-A FT2216 ***
22149805-C-T 19987919-C-T ***
22200718-C-A 20038832-C-A ***
22236346-A-G 20074460-A-G DYZ19 ***
22293195-G-T 20131309-G-T DYZ19 ***
22293198-G-T 20131312-G-T DYZ19 ***
22315423-T-A 20153537-T-A DYZ19 ***
22330232-G-A 20168346-G-A DYZ19 ***
22341742-A-C 20179856-A-C DYZ19 ***
22353454-T-A 20191568-T-A DYZ19 ***
22356983-T-G 20195097-T-G DYZ19 ***
22360527-C-A 20198641-C-A DYZ19 ***
22360691-C-G 20198805-C-G DYZ19 ***
22361261-G-T 20199375-G-T DYZ19 ***
22367215-C-G 20205329-C-G DYZ19 ***
22367457-T-G 20205571-T-G DYZ19 ***
22457184-G-T 20295298-G-T DYZ19 ***
22457218-G-A 20295332-G-A DYZ19 ***
22457261-A-T 20295375-A-T DYZ19 ***
22504311-A-G 20342425-A-G DYZ19 ***
22504880-A-T 20342994-A-T DYZ19 ***
22548373-A-G 20386487-A-G ***
22592911-G-T 20431025-G-T ***
22876457-G-C 20714571-G-C ***
23087716-T-C 20925830-T-C ***
23189973-A-C 21028087-A-C ***
23259234-G-T 21097348-G-T ***
23625456-A-T 21463570-A-T ***
24130033-A-C 21983886-A-C P3_b1 ***
24220450-C-A 22074303-C-A P3_b1 ***
24264354-C-A 22118207-C-A P3_b1 ***
24767084-G-T 22620937-G-T P3_b2 ***
24922211-A-G 22776064-A-G g1 ***
25151038-C-A 23004891-C-A g1 ***
25151044-G-T 23004897-G-T g1 ***
25176049-C-A 23029902-C-A g1 ***
25651603-C-G 23505456-C-G P1_b3 ***
25651778-C-A 23505631-C-A P1_b3 ***
25721013-G-T 23574866-G-T P1_b3 ***
25815191-A-G 23669044-A-G P1_b3 13×TG***
25850534-G-T 23704387-G-T P1_Y1 ***
25930381-T-G 23784234-T-G P1_Y1 ***
25964202-T-G 23818055-T-G P1_Y1 ***
26085089-C-A 23938942-C-A P1_Y1 ***
26100023-G-T 23953876-G-T P1_Y1 ***
26121787-G-T 23975640-G-T P1_Y1 ***
26153820-G-T 24007673-G-T P1_Y1 ***
26314608-T-G 24168461-T-G P1_Y1 ***
26645729-C-A 24499582-C-A P1_g2 ***
26748572-G-T 24602425-G-T P1_g2 ***
26908994-G-T 24762847-G-T P1_r3 ***
27000804-A-G 24854657-A-G P1_r4 ***
27389720-G-T 25243573-G-T P1_g3 ***
27408877-A-T 25262730-A-T P1_g3 ***
27408990-A-T 25262843-A-T P1_g3 ***
27808923-G-T 25662776-G-T P1_Y2 ***
27917906-G-T 25771759-G-T P1_Y2 ***
28086130-G-A 25939983-G-A P1_Y2 ***
28238245-G-T 26092098-G-T P1_b4 ***
28591163-T-G 26445016-T-G ***
28649111-T-G 26502964-T-G ***
28649117-T-G 26502970-T-G ***
28649145-A-C 26502998-A-C ***
28649225-A-C 26503078-A-C ***
28687863-G-C 26541716-G-C ***
28773791-A-C 26627644-A-C ***
28798687-T-A 26652540-T-A ***
56679822-C-A ***
56724981-A-T ***
56725083-G-A ***
56725127-T-G ***
56728228-G-C ***
56756699-T-A ***
56767383-C-T ***
56771244-A-C ***
56771259-G-A ***
56771366-A-C ***
56840012-G-A ***
56877613-T-G ***
56877716-T-A ***
56849627-GG-CA ***
13460702-AA-TG 11305026-AA-TG ***
12484-TC-GT ***
14102-ACAGA-CCAGT ***
7062788-C-CCTG 7194747-C-CCTG ***
9941033-CA-TG 10103424-CA-TG ***
10651612-TC-CT ***
10651628-GCTCTGTCACT-ACTCTGTCACC ***
10651694-TT-CG ***
10654196-CATACA-TAAACC ***
10654377-CATTCCC-AA ***
10654388-ATTCC-GTTCT ***
10655058-TTTCTCTA-ACACTCCATTCTT ***
10658596-T-TCCATA ***
10661177-CATTCCATTCCAC-AAT ***
10661296-TCAT-CCAC ***
10668569-TTCATTAA-GTC ***
10668617-ATTCCGT-GTTCTGA ***
10671487-C-CTCCACGCCAA ***
10671557-CTCTC-TTCCA ***
10671594-ACAA-CCAC ***
10671630-TC-CT ***
10671653-CG-TC ***
10673703-TA-CATTCCT ***
10688011-ATTCT-TTTCC ***
10748155-TTATTCCG-CTACTCCA ***
10754777-TTCT-CTCA ***
10755334-CTCCA-GTCCT ***
10755392-ATCTCTGTTT-CACTC ***
10755419-TTCCATT-CTTCATA ***
10759782-CTCCA-TTCCT ***
10760444-CAA-TCG ***
10761791-ATTCCA-TTTGCC ***
10761819-CC-GT ***
10763352-CTCCATTCCACT-TTCCGTTCTACC ***
10764530-ATTCCATTCCATG-GTTCGATTTCATT ***
10766328-TT-AC ***
10766375-TCCA-AACAC ***
10770634-TTTCC-CTTCT ***
10772453-T-TTCCAG ***
10775925-TGCTCCAC-CACTCAAG ***
10790304-CAT-TGC ***
10790339-GACT-CACA ***
10795893-TTCC-ATCT ***
10807259-TTTCC-ATTCG ***
10807293-TTCAACCAGAA-GTCACCGAGAT ***
10827927-TTCCAA-CTTCAT ***
10831530-ACT-CCC ***
10834123-ACT-GCA ***
10834145-CAATTGCATTG-ATATTCTATTA ***
10834165-TCAT-CAAC ***
10839969-CTCCATTCCA-TACCAATCCT ***
10839987-TA-AT ***
10851106-ATGGTTCTCACTC-CTGGATCAAACTT ***
10851134-GAA-TAG ***
10859672-TTAC-CTTT ***
10873172-GC-AT ***
10873179-CT-TC ***
10878296-CTCAGAC-ATCCGAT ***
10885199-TTC-CTA ***
10899949-TCCA-GCCATTTGT ***
10912632-AGTTG-TGTTA ***
10912643-TTAG-CGAA ***
10914518-CTGA-TTGC ***
10925508-CCAT-GCAA ***
10926545-TT-CG ***
10934736-CTTTCT-TATTCC ***
10935555-TCCAGTC-GACACTG ***
10937652-GTC-CTT ***
10937670-AACTC-CACTG ***
10942649-CTA-ATC ***
10945216-AA-GG ***
10947813-CTCCG-TTCCA ***
10947833-GTCC-TTCA ***
10947857-ACTCCG-TTTCCA ***
10947883-CTCCT-TTCCA ***
10959306-TTCCAT-C ***
10965546-GTCT-TTCA ***
10967570-TTAC-ATAG ***
10972670-CCAC-GCAT ***
10973887-CT-AC ***
10982296-GGC-AGT ***
10982304-CT-AA ***
10983525-GCAT-CCAA ***
10990127-ACTACAT-CCTCCAC ***
10994133-TC-AA ***
11009025-ACTACAA-TCTCCAC ***
11009070-ACTACAA-TCTCCAC ***
11010239-C-CGTTCCATTCT ***
11015129-CCTG-TCTC ***
11015214-GCACT-CCACC ***
11015965-GTA-ATC ***
11015973-CA-AG ***
11015982-ACA-CCC ***
11021278-CCAACT-TCATCA ***
11021348-TCTCTACTGCAT-ACTCCAC ***
11021402-CACTG-GAATC ***
11023057-CAC-AAT ***
11023080-GCCATTT-TCTATTC ***
11025525-ACTG-CCTC ***
11025536-TTTCAT-CTCCAA ***
11025875-CTCT-TTCC ***
11027308-TTCCAC-CTGCAT ***
11034775-TTTCT-ATTCA ***
11038151-ACTCT-TCTCC ***
11038189-CCACTCCAA-GCATTCCTT ***
13460708-GTCAC-CTCAA 11305032-GTCAC-CTCAA ***
13474547-GCC-TCG 11318871-GCC-TCG ***
13486610-CTA-TTT 11330934-CTA-TTT ***
13504823-GG-TT 11349147-GG-TT ***
13572366-GGGA-TGGG 11416690-GGGA-TGGG ***
13746762-GCAGAGTGGAATCAAGTGGAA-ACATAG 11591086-GCAGAGTGGAATCAAGTGGAA-ACATAG DYZ17 ***
14573102-GTC-G 12461302-GTC-G ***
14787758-GTATATA-G 12675828-GTATATA-G 10×TA***
17056949-T-TAAG 14945069-T-TAAG ***
22330232-GGA-AGC 20168346-GGA-AGC DYZ19 ***
22330279-GGT-TAC 20168393-GGT-TAC DYZ19 ***
22357726-AT-GA 20195840-AT-GA DYZ19 ***
22359878-CAGT-GAGA 20197992-CAGT-GAGA DYZ19 ***
22457183-TG-GT 20295297-TG-GT DYZ19 ***
23672294-CCCA-ACCC 21510408-CCCA-ACCC ***
25200899-GAA-G 23054752-GAA-G g1 ***
56828124-C-CATTCCATTAA ***
56884342-A-ACAAC ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.