Tree Position

R-U106/S21 > Z2265 > Y138795

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRBigY3
316058
BigY2
316058
hg19:Y:28375908-T-A hg38:Y:26229761-T-A P1_gr2 A+
hg19:Y:20469647-C-A hg38:Y:18307761-C-A P5_Dst A+
hg19:Y:24281286-T-C hg38:Y:22135139-T-C P3_t1 A+
hg19:Y:24597429-A-G hg38:Y:22451282-A-G P3_t2 A+
hg19:Y:58969954-A-G hg38:Y:56823807-A-G A*
hg19:Y:19793648-C-A hg38:Y:17681768-C-A P5_Prx A*A*
hg19:Y:19914948-G-A hg38:Y:17803068-G-A P5_Prx A*A*
hg19:Y:22305106-A-C hg38:Y:20143220-A-C DYZ19 A*
hg19:Y:24310631-G-A hg38:Y:22164484-G-A P3_t1 A*A*
hg38:Y:56831062-C-T A*
hg19:Y:9607709-T-TTG hg38:Y:9770100-T-TTG IR3_Prx 11×TGA*
hg19:Y:19618219-T-G hg38:Y:17506339-T-G P5_Prx YA*
hg19:Y:20264828-C-T hg38:Y:18102942-C-T P5_Dst A*
hg19:Y:25534572-C-T hg38:Y:23388425-C-T P1_gr1 A*
hg19:Y:26345243-C-T hg38:Y:24199096-C-T P1_Y1 A*
hg19:Y:26367294-A-C hg38:Y:24221147-A-C P1_Y1 A*
hg38:Y:56829724-T-G A*
hg19:Y:16045738-C-T hg38:Y:13933858-C-T CTS5159 Y+**
hg19:Y:17456692-C-T hg38:Y:15344812-C-T M10012 PF856 YY++
hg19:Y:21487037-A-T hg38:Y:19325151-A-T BY12179A9485 BY1760 YY++
hg19:Y:14003863-C-T hg38:Y:11883157-C-T BY47133 YY++
hg19:Y:3833953-ATCTC-A hg38:Y:3965912-ATCTC-A ++
hg19:Y:3436366-C-A hg38:Y:3568325-C-A FT317225 +
hg19:Y:26500453-C-A hg38:Y:24354306-C-A P1_Y1 +
hg19:Y:6634449-T-A hg38:Y:6766408-T-A Y138787 YY++
hg19:Y:6736889-G-A hg38:Y:6868848-G-A Y138837 YY++
hg19:Y:6883366-AC-A hg38:Y:7015325-AC-A ++
hg19:Y:6930378-G-A hg38:Y:7062337-G-A Y82905 Y++
hg19:Y:6993617-G-A hg38:Y:7125576-G-A BY7941 YY++
hg19:Y:7198383-T-C hg38:Y:7330342-T-C BY63842 YY++
hg19:Y:7626759-A-T hg38:Y:7758718-A-T Y138828 YY++
hg19:Y:7748964-G-T hg38:Y:7880923-G-T Y138823 YY++
hg19:Y:7844665-A-G hg38:Y:7976624-A-G Y138796 YY++
hg19:Y:8368944-G-T hg38:Y:8500903-G-T Y138807 YY++
hg19:Y:8443531-A-G hg38:Y:8575490-A-G Y138831 YY++
hg19:Y:8575820-C-T hg38:Y:8707779-C-T Y138788 YY++
hg38:Y:10835663-A-G FT433373 +**
hg19:Y:13824839-G-A hg38:Y:11704133-G-A Y138813 DYZ17 +**
hg19:Y:14243591-C-A hg38:Y:12122885-C-A Y138817 YY++
hg19:Y:14275784-G-A hg38:Y:12155078-G-A Y138809 YY++
hg19:Y:14438181-C-T hg38:Y:12317454-C-T Y138839 Y++
hg19:Y:15456180-C-T hg38:Y:13344300-C-T Y138821 YY++
hg19:Y:16444399-T-G hg38:Y:14332519-T-G Y138812 YY++
hg19:Y:16772632-A-C hg38:Y:14660752-A-C Y138829 YY++
hg19:Y:17525457-A-T hg38:Y:15413577-A-T Y138800 YY++
hg19:Y:17817219-T-C hg38:Y:15705339-T-C Y138827 YY++
hg19:Y:17908692-G-A hg38:Y:15796812-G-A Y138797 YY++
hg19:Y:18048353-G-A hg38:Y:15936473-G-A Y138789 YY++
hg19:Y:18075060-A-C hg38:Y:15963180-A-C Y138834 YY++
hg19:Y:18084432-C-T hg38:Y:15972552-C-T Y138833 YY++
hg19:Y:18240585-T-C hg38:Y:16128705-T-C Y138818 Y++
hg19:Y:18692088-C-T hg38:Y:16580208-C-T BY123158 YY++
hg19:Y:18888218-G-C hg38:Y:16776338-G-C Y138804 YY++
hg19:Y:19005357-G-C hg38:Y:16893477-G-C Y138824 YY++
hg19:Y:19094851-T-A hg38:Y:16982971-T-A Y138790 YY++
hg19:Y:19269103-G-A hg38:Y:17157223-G-A Y138810 YY++
hg19:Y:19539568-G-A hg38:Y:17427688-G-A FT118813 YY9×T+**
hg19:Y:21149548-A-C hg38:Y:18987662-A-C FT118884 YY+**
hg19:Y:21384840-G-T hg38:Y:19222954-G-T Y138832 YY++
hg19:Y:21916315-C-G hg38:Y:19754429-C-G Y138835 YY++
hg19:Y:22222082-A-C hg38:Y:20060196-A-C BY213025 DYZ19 **+
hg19:Y:22463066-A-G hg38:Y:20301180-A-G BY221045 DYZ19 ++
hg19:Y:22463112-A-T hg38:Y:20301226-A-T BY174768 BY197898 DYZ19 ++
hg19:Y:22483318-A-G hg38:Y:20321432-A-G BY224472 DYZ19 +
hg19:Y:22506718-G-T hg38:Y:20344832-G-T BY48666 DYZ19 **+
hg19:Y:22795759-C-G hg38:Y:20633873-C-G Y138838 YY++
hg19:Y:22959726-C-T hg38:Y:20797840-C-T Y138826 YY++
hg19:Y:24382773-A-G hg38:Y:22236626-A-G Y138791 Y++
hg19:Y:24876467-A-G hg38:Y:22730320-A-G BY226198 g1 ++
hg19:Y:3130789-T-C hg38:Y:3262748-T-C FT112664 +
hg19:Y:3750845-T-G hg38:Y:3882804-T-G FT113105 +
hg19:Y:3831028-G-A hg38:Y:3962987-G-A FT113172 +
hg19:Y:4450049-G-A hg38:Y:4582008-G-A FT113643 +
hg19:Y:4884031-C-A hg38:Y:5015990-C-A FT113972 +
hg19:Y:7917994-C-A hg38:Y:8049953-C-A FT115641 Y+
hg38:Y:10623573-C-T FT427939 +
hg19:Y:13392936-C-A hg38:Y:11237260-C-A FT127752 +
hg19:Y:14079868-G-A hg38:Y:11959162-G-A FT116468 YY+
hg38:Y:12375878-C-T FT116712 +
hg19:Y:14528464-G-A hg38:Y:12416665-G-A FT116741 YY+
hg19:Y:14797188-A-G hg38:Y:12685259-A-G FT116874 Y+
hg19:Y:15334870-T-A hg38:Y:13222988-T-A FT117044 YY+
hg19:Y:15943369-G-A hg38:Y:13831489-G-A FT117302 Y+
hg19:Y:17199595-A-T hg38:Y:15087715-A-T FT117838 YY+
hg19:Y:17797752-A-T hg38:Y:15685872-A-T FT118109 Y+
hg19:Y:19146395-A-G hg38:Y:17034515-A-G FT118604 YY+
hg19:Y:28460036-C-G hg38:Y:26313889-C-G FT119974 +
hg19:Y:28466697-C-CT hg38:Y:26320550-C-CT +
hg19:Y:28538589-G-A hg38:Y:26392442-G-A FT120032 +
hg19:Y:13850547-CATGGA-C hg38:Y:11729841-CATGGA-C DYZ17 7×ATGGA****
hg19:Y:58995619-G-T hg38:Y:56849472-G-T *
hg19:Y:21562948-T-TG hg38:Y:19401062-T-TG **
hg19:Y:6839629-C-CAG hg38:Y:6971588-C-CAG 10×AG*
hg19:Y:22442743-G-T hg38:Y:20280857-G-T ZS12134 DYZ19 **
hg19:Y:22510074-G-T hg38:Y:20348188-G-T BY208573 DYZ19 ****
hg38:Y:56841225-A-G *
hg19:Y:22241631-C-A hg38:Y:20079745-C-A DYZ19 **
hg19:Y:22801761-C-A hg38:Y:20639875-C-A F25455 **
hg19:Y:59001477-C-T hg38:Y:56855330-C-T **
hg19:Y:20033354-T-G hg38:Y:17921474-T-G P5_Prx **
hg38:Y:11037165-C-CT **
hg19:Y:22241597-G-A hg38:Y:20079711-G-A DYZ19 **
hg38:Y:11653428-C-A DYZ17 **
hg19:Y:5221090-C-A hg38:Y:5353049-C-A **
hg38:Y:10789284-C-A **
hg19:Y:19535560-C-A hg38:Y:17423680-C-A **
hg38:Y:11015890-T-C **
hg19:Y:4561484-C-A hg38:Y:4693443-C-A **
hg38:Y:10964821-G-T **
hg19:Y:20404471-AAAAG-A hg38:Y:18242585-AAAAG-A P5_Dst **
hg38:Y:10770637-C-G **
hg19:Y:3345787-C-A hg38:Y:3477746-C-A **
hg19:Y:6799059-C-A hg38:Y:6931018-C-A **
hg19:Y:7713338-C-A hg38:Y:7845297-C-A **
hg19:Y:13229696-C-A hg38:Y:11074020-C-A **
hg38:Y:10948416-C-T **
hg19:Y:14187165-C-A hg38:Y:12066459-C-A **
hg19:Y:22234714-A-C hg38:Y:20072828-A-C DYZ19 **
hg19:Y:22234755-A-C hg38:Y:20072869-A-C DYZ19 **
hg38:Y:11667981-C-A DYZ17 **
hg38:Y:10919558-C-G **
hg19:Y:5728183-C-A hg38:Y:5860142-C-A **
hg19:Y:13690223-A-T hg38:Y:11534547-A-T DYZ17 **
hg38:Y:10652944-C-TGATTA **
hg38:Y:10884947-T-C **
hg38:Y:10884994-T-C **
hg19:Y:27575967-G-T hg38:Y:25429820-G-T P1_Y2 **
hg19:Y:23625461-C-A hg38:Y:21463575-C-A **
hg38:Y:10633207-A-C **
hg38:Y:10775965-C-A **
hg19:Y:13881424-C-A hg38:Y:11760718-C-A **
hg19:Y:6147507-G-T hg38:Y:6279466-G-T IR3_Dst **
hg38:Y:10768718-C-G **
hg19:Y:18201163-C-A hg38:Y:16089283-C-A **
hg38:Y:10801677-C-G **
hg38:Y:10924699-A-T **
hg19:Y:14098790-C-A hg38:Y:11978084-C-A **
hg38:Y:10962910-A-T **
hg19:Y:16506766-C-CAA hg38:Y:14394886-C-CAA 19×A**
hg19:Y:21328841-G-T hg38:Y:19166955-G-T **
hg19:Y:9451339-C-T hg38:Y:9613730-C-T **
hg38:Y:11003131-T-C **
hg38:Y:11032784-C-A **
hg19:Y:13939193-C-A hg38:Y:11818487-C-A **
hg38:Y:10770634-T-TGCCCA **
hg19:Y:17346344-C-A hg38:Y:15234464-C-A **
hg19:Y:19746909-G-A hg38:Y:17635029-G-A P5_Prx **
hg19:Y:22077120-C-A hg38:Y:19915234-C-A **
hg19:Y:17029312-C-A hg38:Y:14917432-C-A **
hg19:Y:22171083-C-A hg38:Y:20009197-C-A **
hg19:Y:22965269-G-T hg38:Y:20803383-G-T FGC63828 **
hg38:Y:10987476-C-T FT218795 **
hg19:Y:9799133-TCA-T hg38:Y:9961524-TCA-T **
hg38:Y:10962906-T-A **
hg38:Y:10962922-C-A **
hg19:Y:21427083-C-A hg38:Y:19265197-C-A Y106449 **
hg19:Y:21604031-T-G hg38:Y:19442145-T-G **
hg38:Y:56742698-A-G **
hg19:Y:28791353-G-A hg38:Y:26645206-G-A *****
hg38:Y:10884971-C-T **
hg38:Y:10884973-A-T **
hg38:Y:10959133-A-T **
hg19:Y:28623378-C-A hg38:Y:26477231-C-A **
hg19:Y:25560921-G-T hg38:Y:23414774-G-T P1_gr1 **
hg38:Y:10801682-C-T **
hg19:Y:7935708-C-A hg38:Y:8067667-C-A **
hg19:Y:6808083-A-C hg38:Y:6940042-A-C **
hg38:Y:10919578-G-T **
hg19:Y:19274747-C-A hg38:Y:17162867-C-A FGC28931 **
hg19:Y:14550249-C-A hg38:Y:12438450-C-A **
hg38:Y:10692680-T-A **
hg19:Y:7160876-C-A hg38:Y:7292835-C-A **
hg19:Y:28790720-G-A hg38:Y:26644573-G-A **
hg19:Y:9926875-C-A hg38:Y:10089266-C-A **
hg19:Y:21946852-C-A hg38:Y:19784966-C-A **
hg38:Y:11015933-C-CT **
hg19:Y:13932637-C-A hg38:Y:11811931-C-A **
hg19:Y:23126734-C-A hg38:Y:20964848-C-A **
hg19:Y:7110969-C-A hg38:Y:7242928-C-A **
hg38:Y:10796660-T-G **
hg38:Y:10837685-T-C **
hg19:Y:17568212-C-A hg38:Y:15456332-C-A **
hg38:Y:10810508-A-T **
hg19:Y:3535896-C-A hg38:Y:3667855-C-A **
hg38:Y:10870134-A-T **
hg19:Y:4216020-G-T hg38:Y:4347979-G-T **
hg19:Y:7294817-C-A hg38:Y:7426776-C-A **
hg19:Y:4467235-C-A hg38:Y:4599194-C-A **
hg38:Y:10655825-A-G **
hg19:Y:27499339-A-T hg38:Y:25353192-A-T P1_Y2 **
hg38:Y:10962920-T-G **
hg19:Y:18174915-T-C hg38:Y:16063035-T-C **
hg38:Y:10673928-C-G **
hg19:Y:9548983-G-GTT hg38:Y:9711374-G-GTT IR3_Prx **
hg38:Y:11030244-C-G **
hg38:Y:10952471-A-G **
hg38:Y:10919530-G-C **
hg38:Y:11030059-CAAATAAT-C **
hg38:Y:10660736-C-A **
hg19:Y:22234705-A-T hg38:Y:20072819-A-T DYZ19 **
hg19:Y:9191084-C-G hg38:Y:9353475-C-G **
hg19:Y:16092641-C-A hg38:Y:13980761-C-A **
hg19:Y:16104375-CTT-C hg38:Y:13992495-CTT-C P8_Prx 19×T**
hg19:Y:22241599-A-T hg38:Y:20079713-A-T DYZ19 **
hg19:Y:14506900-C-A hg38:Y:12395105-C-A **
hg19:Y:14286005-C-A hg38:Y:12165299-C-A **
hg38:Y:10789737-C-A **
hg38:Y:11037212-C-G **
hg19:Y:4094510-C-A hg38:Y:4226469-C-A **
hg19:Y:2928954-G-A hg38:Y:3060913-G-A **
hg19:Y:2931128-G-T hg38:Y:3063087-G-T **
hg19:Y:3002564-T-G hg38:Y:3134523-T-G **
hg19:Y:3204213-G-T hg38:Y:3336172-G-T **
hg19:Y:3357214-G-T hg38:Y:3489173-G-T **
hg19:Y:3571449-G-T hg38:Y:3703408-G-T **
hg19:Y:3571472-G-T hg38:Y:3703431-G-T **
hg19:Y:3725806-C-T hg38:Y:3857765-C-T **
hg19:Y:4097968-A-T hg38:Y:4229927-A-T **
hg19:Y:4311369-C-A hg38:Y:4443328-C-A **
hg19:Y:4330031-C-A hg38:Y:4461990-C-A **
hg19:Y:4365962-C-A hg38:Y:4497921-C-A **
hg19:Y:4389618-C-A hg38:Y:4521577-C-A **
hg19:Y:4687492-T-G hg38:Y:4819451-T-G **
hg19:Y:4703768-C-A hg38:Y:4835727-C-A **
hg19:Y:4936053-CAAAAA-C hg38:Y:5068012-CAAAAA-C 26×A**
hg19:Y:5127172-C-A hg38:Y:5259131-C-A **
hg19:Y:5261135-C-A hg38:Y:5393094-C-A **
hg19:Y:5442043-G-T hg38:Y:5574002-G-T **
hg19:Y:5562688-C-A hg38:Y:5694647-C-A **
hg19:Y:5688584-C-A hg38:Y:5820543-C-A **
hg19:Y:5783895-A-T hg38:Y:5915854-A-T **
hg19:Y:5824916-C-A hg38:Y:5956875-C-A **
hg19:Y:6222716-A-C hg38:Y:6354675-A-C IR3_Dst **
hg19:Y:6314975-G-GT hg38:Y:6446934-G-GT IR3_Dst **
hg19:Y:6356206-C-A hg38:Y:6488165-C-A **
hg19:Y:6486728-C-A hg38:Y:6618687-C-A **
hg19:Y:6541078-T-C hg38:Y:6673037-T-C **
hg19:Y:6699554-T-G hg38:Y:6831513-T-G **
hg19:Y:6728426-G-T hg38:Y:6860385-G-T FT18712 **
hg19:Y:6929430-T-C hg38:Y:7061389-T-C **
hg19:Y:7102360-T-A hg38:Y:7234319-T-A **
hg19:Y:7102362-G-C hg38:Y:7234321-G-C **
hg19:Y:7201450-G-T hg38:Y:7333409-G-T **
hg19:Y:7253714-C-A hg38:Y:7385673-C-A **
hg19:Y:7259074-C-A hg38:Y:7391033-C-A **
hg19:Y:7314671-T-G hg38:Y:7446630-T-G **
hg19:Y:7381732-A-C hg38:Y:7513691-A-C **
hg19:Y:7615292-C-A hg38:Y:7747251-C-A **
hg19:Y:8008073-T-G hg38:Y:8140032-T-G **
hg19:Y:8214096-G-T hg38:Y:8346055-G-T **
hg19:Y:8669835-C-A hg38:Y:8801794-C-A **
hg19:Y:8697518-C-A hg38:Y:8829477-C-A **
hg19:Y:8733597-G-A hg38:Y:8865556-G-A **
hg19:Y:8976101-G-T hg38:Y:9138492-G-T **
hg19:Y:9529301-G-T hg38:Y:9691692-G-T IR3_Prx **
hg19:Y:9529306-A-T hg38:Y:9691697-A-T IR3_Prx **
hg19:Y:9529313-CTT-C hg38:Y:9691704-CTT-C IR3_Prx **
hg19:Y:9623646-A-AAT hg38:Y:9786037-A-AAT IR3_Prx **
hg19:Y:9888971-G-T hg38:Y:10051362-G-T **
hg38:Y:10648059-C-G **
hg38:Y:10654032-G-T **
hg38:Y:10657247-C-A **
hg38:Y:10663389-CCACTT-C **
hg38:Y:10677600-C-A **
hg38:Y:10683770-C-A **
hg38:Y:10691289-T-G **
hg38:Y:10692821-C-A **
hg38:Y:10768727-C-G **
hg38:Y:10769867-A-T **
hg38:Y:10778998-C-G **
hg38:Y:10821531-C-T **
hg38:Y:10835504-T-C **
hg38:Y:10839096-C-A **
hg38:Y:10842542-T-G **
hg38:Y:10856994-C-G **
hg38:Y:10862719-T-A **
hg38:Y:10883204-G-T **
hg38:Y:10884978-A-C **
hg38:Y:10887228-T-G **
hg38:Y:10898635-T-G **
hg38:Y:10899161-C-G **
hg38:Y:10919540-C-A **
hg38:Y:10924740-T-A **
hg38:Y:10929588-A-T **
hg38:Y:10932462-G-T **
hg38:Y:10932505-A-T **
hg38:Y:10947581-C-T **
hg38:Y:10948099-T-C **
hg38:Y:10948364-T-TCCATC **
hg38:Y:10948380-A-G **
hg38:Y:10948400-A-CG **
hg38:Y:10948428-T-C **
hg38:Y:10950699-TCC-T **
hg38:Y:10952427-A-C **
hg38:Y:10952459-CA-C **
hg38:Y:10963222-C-G **
hg38:Y:10974097-C-A **
hg38:Y:10977986-C-A **
hg38:Y:10979883-A-T **
hg38:Y:10985145-A-T **
hg38:Y:10985328-C-A **
hg38:Y:10987434-TACTCC-T **
hg38:Y:10990981-T-A **
hg38:Y:10993945-C-G **
hg38:Y:10996159-T-G **
hg38:Y:10998162-C-A **
hg38:Y:11003693-C-T **
hg38:Y:11003694-A-G **
hg38:Y:11015173-C-A **
hg38:Y:11015895-T-G **
hg38:Y:11027411-C-A **
hg38:Y:11037174-A-G **
hg38:Y:11037217-G-C **
hg19:Y:13221914-A-T hg38:Y:11066238-A-T **
hg19:Y:13255726-C-A hg38:Y:11100050-C-A **
hg19:Y:13262855-G-A hg38:Y:11107179-G-A **
hg19:Y:13327870-T-G hg38:Y:11172194-T-G **
hg19:Y:13457776-C-CCCGGT hg38:Y:11302100-C-CCCGGT **
hg19:Y:13643987-C-A hg38:Y:11488311-C-A **
hg19:Y:13698531-T-A hg38:Y:11542855-T-A DYZ17 **
hg19:Y:13713423-CG-C hg38:Y:11557747-CG-C DYZ17 **
hg19:Y:13717500-G-A hg38:Y:11561824-G-A DYZ17 **
hg38:Y:11650670-T-C FT450199 DYZ17 **
hg38:Y:11658507-G-A DYZ17 **
hg38:Y:11663852-A-C DYZ17 **
hg19:Y:13856598-C-T hg38:Y:11735892-C-T DYZ17 **
hg19:Y:13872740-C-A hg38:Y:11752034-C-A **
hg19:Y:13989022-C-A hg38:Y:11868316-C-A **
hg19:Y:14474801-C-A hg38:Y:12354070-C-A **
hg19:Y:14492675-G-T hg38:Y:12380872-G-T **
hg19:Y:14563004-G-C hg38:Y:12451204-G-C **
hg19:Y:14716527-C-A hg38:Y:12604595-C-A **
hg19:Y:14716631-A-C hg38:Y:12604699-A-C **
hg19:Y:14743596-C-A hg38:Y:12631665-C-A **
hg19:Y:14802895-C-A hg38:Y:12690966-C-A **
hg19:Y:15049910-C-A hg38:Y:12938001-C-A **
hg19:Y:15106706-C-A hg38:Y:12994794-C-A **
hg19:Y:15222019-T-C hg38:Y:13110105-T-C **
hg19:Y:15366356-G-T hg38:Y:13254476-G-T **
hg19:Y:15491904-TATAG-T hg38:Y:13380024-TATAG-T **
hg19:Y:15748473-C-A hg38:Y:13636593-C-A **
hg19:Y:15761078-C-A hg38:Y:13649198-C-A **
hg19:Y:15931747-C-A hg38:Y:13819867-C-A **
hg19:Y:15943548-G-T hg38:Y:13831668-G-T **
hg19:Y:15944212-C-A hg38:Y:13832332-C-A **
hg19:Y:16005440-A-C hg38:Y:13893560-A-C **
hg19:Y:16050099-C-A hg38:Y:13938219-C-A **
hg19:Y:16208855-T-G hg38:Y:14096975-T-G **
hg19:Y:16319675-C-A hg38:Y:14207795-C-A **
hg19:Y:16462779-GA-G hg38:Y:14350899-GA-G **
hg19:Y:16675651-G-T hg38:Y:14563771-G-T **
hg19:Y:16722609-C-A hg38:Y:14610729-C-A **
hg19:Y:16742953-A-C hg38:Y:14631073-A-C 9×T**
hg19:Y:16938525-T-C hg38:Y:14826645-T-C **
hg19:Y:16993397-C-A hg38:Y:14881517-C-A **
hg19:Y:17042815-C-A hg38:Y:14930935-C-A **
hg19:Y:17245288-G-T hg38:Y:15133408-G-T **
hg19:Y:17245397-G-T hg38:Y:15133517-G-T **
hg19:Y:17498963-C-A hg38:Y:15387083-C-A **
hg19:Y:17500432-G-T hg38:Y:15388552-G-T FT347401 **
hg19:Y:17503636-T-G hg38:Y:15391756-T-G **
hg19:Y:17876405-A-C hg38:Y:15764525-A-C **
hg19:Y:17929115-C-A hg38:Y:15817235-C-A **
hg19:Y:17997507-T-C hg38:Y:15885627-T-C P7_Gap **
hg19:Y:18093881-A-C hg38:Y:15982001-A-C **
hg19:Y:18184781-C-T hg38:Y:16072901-C-T **
hg19:Y:18794918-A-C hg38:Y:16683038-A-C **
hg19:Y:18906308-C-A hg38:Y:16794428-C-A **
hg19:Y:19000148-T-A hg38:Y:16888268-T-A **
hg19:Y:19286325-C-A hg38:Y:17174445-C-A **
hg19:Y:19682819-C-G hg38:Y:17570939-C-G P5_Prx **
hg19:Y:19979893-G-TT hg38:Y:17868013-G-TT P5_Prx **
hg19:Y:20420011-A-T hg38:Y:18258125-A-T P5_Dst **
hg19:Y:20420021-C-A hg38:Y:18258135-C-A P5_Dst **
hg19:Y:20420024-G-T hg38:Y:18258138-G-T P5_Dst **
hg19:Y:20420031-G-T hg38:Y:18258145-G-T P5_Dst **
hg19:Y:21208629-C-A hg38:Y:19046743-C-A **
hg19:Y:21243981-A-C hg38:Y:19082095-A-C **
hg19:Y:21276093-C-A hg38:Y:19114207-C-A **
hg19:Y:21279695-T-C hg38:Y:19117809-T-C **
hg19:Y:21281699-C-A hg38:Y:19119813-C-A **
hg19:Y:21583889-C-A hg38:Y:19422003-C-A **
hg19:Y:21584141-C-A hg38:Y:19422255-C-A **
hg19:Y:21791431-C-A hg38:Y:19629545-C-A **
hg19:Y:21796704-A-C hg38:Y:19634818-A-C **
hg19:Y:21818978-T-G hg38:Y:19657092-T-G **
hg19:Y:21912045-C-A hg38:Y:19750159-C-A **
hg19:Y:21920741-T-G hg38:Y:19758855-T-G **
hg19:Y:22154906-G-T hg38:Y:19993020-G-T **
hg19:Y:22436232-AG-A hg38:Y:20274346-AG-A DYZ19 **
hg19:Y:22461425-G-A hg38:Y:20299539-G-A DYZ19 **
hg19:Y:22487012-A-G hg38:Y:20325126-A-G DYZ19 **
hg19:Y:22766727-G-T hg38:Y:20604841-G-T **
hg19:Y:22775377-C-T hg38:Y:20613491-C-T **
hg19:Y:22811022-C-A hg38:Y:20649136-C-A **
hg19:Y:22869716-A-C hg38:Y:20707830-A-C **
hg19:Y:23570270-C-A hg38:Y:21408384-C-A **
hg19:Y:23788080-C-A hg38:Y:21626194-C-A **
hg38:Y:21754057-G-T **
hg19:Y:24300708-C-A hg38:Y:22154561-C-A P3_t1 **
hg19:Y:24389873-C-A hg38:Y:22243726-C-A **
hg19:Y:24450566-G-T hg38:Y:22304419-G-T **
hg19:Y:26024576-G-T hg38:Y:23878429-G-T P1_Y1 **
hg19:Y:26358754-C-A hg38:Y:24212607-C-A P1_Y1 **
hg19:Y:27861812-C-A hg38:Y:25715665-C-A P1_Y2 **
hg19:Y:27971764-CA-C hg38:Y:25825617-CA-C P1_Y2 **
hg19:Y:28022286-A-G hg38:Y:25876139-A-G P1_Y2 **
hg19:Y:28506083-A-G hg38:Y:26359936-A-G **
hg19:Y:28790717-A-G hg38:Y:26644570-A-G **
hg19:Y:28791422-G-T hg38:Y:26645275-G-T **
hg38:Y:56748000-T-A **
hg38:Y:56748012-G-A **
hg38:Y:56748044-A-C **
hg38:Y:56838277-G-T **
hg38:Y:56855418-A-C **
hg38:Y:56861289-T-A **
hg38:Y:56861290-T-TA **
hg38:Y2:30126-A-C **
hg19:Y:26199613-G-GTA hg38:Y:24053466-G-GTA P1_Y1 **
hg19:Y:17466858-C-T hg38:Y:15354978-C-T **
hg38:Y:10627879-C-CAATCT **
hg38:Y:10784492-A-T **
hg19:Y:13537213-C-T hg38:Y:11381537-C-T **
hg19:Y:14129434-C-T hg38:Y:12008728-C-T **
hg19:Y:19831847-C-A hg38:Y:17719967-C-A P5_Prx **
hg19:Y:22856118-A-G hg38:Y:20694232-A-G **
hg19:Y:26029684-C-A hg38:Y:23883537-C-A P1_Y1 **
hg19:Y:26089018-C-A hg38:Y:23942871-C-A P1_Y1 **
hg19:Y:26089060-TC-T hg38:Y:23942913-TC-T P1_Y1 **
hg19:Y:19138084-CTATA-C hg38:Y:17026204-CTATA-C 10×TA***
hg19:Y:9519812-T-TTTTCTTTC hg38:Y:9682203-T-TTTTCTTTC 17×TTTC***
hg19:Y:5179539-TATAC-T hg38:Y:5311498-TATAC-T ***
hg38:Y:10889789-C-A ***
hg19:Y:5761148-C-A hg38:Y:5893107-C-A ***
hg19:Y:19075397-C-A hg38:Y:16963517-C-A ***
hg38:Y:10958333-C-CCT ***
hg38:Y:10899214-C-A ***
hg19:Y:22008569-C-A hg38:Y:19846683-C-A ***
hg38:Y:10785092-G-T ***
hg19:Y:7203972-T-C hg38:Y:7335931-T-C ***
hg19:Y:7768847-C-A hg38:Y:7900806-C-A ***
hg19:Y:9956364-TAA-T,TAAA hg38:Y:10118755-TAA-T,TAAA 16×A***
hg19:Y:10016802-C-A hg38:Y:10179193-C-A ***
hg38:Y:10658294-G-A ***
hg38:Y:10662152-C-A ***
hg38:Y:10785155-T-C ***
hg38:Y:10889794-C-A ***
hg38:Y:10889806-ATTCCA-A,ATTCCG ***
hg38:Y:10983962-T-A ***
hg19:Y:13194804-C-G hg38:Y:11039128-C-G ***
hg19:Y:22147828-T-C hg38:Y:19985942-T-C ***
hg19:Y:23440191-C-A hg38:Y:21278305-C-A ***
hg19:Y:27266427-C-A hg38:Y:25120280-C-A P1_g3 ***
hg38:Y:56833308-TGCCAT-C,CCAC ***
hg19:Y:14886399-CAAAAAA-C hg38:Y:12774465-CAAAAAA-C 21×A***
hg19:Y:7095084-T-C hg38:Y:7227043-T-C ***
hg19:Y:17669700-C-T hg38:Y:15557820-C-T 15×AT***
hg19:Y:3941028-TTATATA-T hg38:Y:4072987-TTATATA-T 8×TA***
hg19:Y:4254888-A-G hg38:Y:4386847-A-G ***
hg19:Y:9411080-G-A hg38:Y:9573471-G-A ***
hg19:Y:13458903-A-T hg38:Y:11303227-A-T ***
hg19:Y:13620069-C-T hg38:Y:11464393-C-T ***
hg19:Y:22464675-C-T hg38:Y:20302789-C-T DYZ19 ***
hg19:Y:26500454-AC-A hg38:Y:24354307-AC-A P1_Y1 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 316058982219280130667887796
Kit: 3160581516532694858468374926
Used in age calculations1516532694858468374926
Counts of SNPs4842
Variant counts last updated 2026-02-08 02:56:29.



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