Innes

BigY2: 555100, BigY3: 555100
MDKA Birth: Scotland

Tree Position

R-U106/S21 > Z2265 > BY30097 > Z381/S263 > 38:15277955GA>G > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRBigY2
555100		BigY3
555100
hg19:Y:19952885-G-A hg38:Y:17841005-G-A BY1635 P5_Prx A*
hg19:Y:8997684-G-A hg38:Y:9160075-G-A M644 YA*
hg19:Y:22232882-C-T hg38:Y:20070996-C-T BY24967 DYZ19 A*
hg19:Y:6283194-A-T hg38:Y:6415153-A-T KMS127 IR3_Dst A*
hg19:Y:19796057-C-T hg38:Y:17684177-C-T BY24935 P5_Prx A*
hg19:Y:25970050-C-G hg38:Y:23823903-C-G BY2421 P1_Y1 A*
hg19:Y:26102301-C-A hg38:Y:23956154-C-A P1_Y1 A*
hg19:Y:28817435-A-G hg38:Y:26671288-A-G A*
hg19:Y:28817021-A-G hg38:Y:26670874-A-G A*
hg19:Y:28817609-G-T hg38:Y:26671462-G-T A*
hg19:Y:18443607-G-A hg38:Y:16331727-G-A P6_Dst A*
hg19:Y:6221332-C-T hg38:Y:6353291-C-T IR3_Dst A*
hg19:Y:6236313-T-C hg38:Y:6368272-T-C IR3_Dst A*
hg19:Y:13697628-G-A hg38:Y:11541952-G-A DYZ17 A*
hg19:Y:13697658-C-T hg38:Y:11541982-C-T DYZ17 A*
hg19:Y:13704382-T-C hg38:Y:11548706-T-C BY29894 DYZ17 A*
hg19:Y:14433792-C-T hg38:Y:12313065-C-T YP4167 YA*
hg19:Y:14873399-G-A hg38:Y:12761469-G-A YP4173 YYA*
hg19:Y:15314026-T-C hg38:Y:13202131-T-C YP4177 YYA*
hg19:Y:16918738-G-C hg38:Y:14806858-G-C YP4192 YYA*
hg19:Y:18276372-G-C hg38:Y:16164492-G-C P6_Prx A*
hg19:Y:19762846-A-G hg38:Y:17650966-A-G P5_Prx A*
hg19:Y:19883107-C-T hg38:Y:17771227-C-T P5_Prx A*
hg19:Y:20625277-C-G hg38:Y:18463391-C-G P4_Prx A*
hg19:Y:20699148-T-C hg38:Y:18537262-T-C P4_Prx A*
hg19:Y:20713390-A-T hg38:Y:18551504-A-T P4_Prx A*
hg19:Y:22224496-G-A hg38:Y:20062610-G-A DYZ19 A*
hg19:Y:22231755-C-A hg38:Y:20069869-C-A DYZ19 A*A*
hg19:Y:22276795-G-C hg38:Y:20114909-G-C DYZ19 A*
hg19:Y:22305349-G-A hg38:Y:20143463-G-A DYZ19 A*
hg19:Y:22450616-G-T hg38:Y:20288730-G-T DYZ19 A*
hg19:Y:22672006-C-T hg38:Y:20510120-C-T YP4218 YYA*
hg19:Y:25865619-T-C hg38:Y:23719472-T-C P1_Y1 A*A*
hg19:Y:25980772-G-A hg38:Y:23834625-G-A P1_Y1 A*
hg19:Y:26071757-G-A hg38:Y:23925610-G-A P1_Y1 A*
hg19:Y:26253275-G-GA hg38:Y:24107128-G-GA P1_Y1 A*
hg19:Y:28816759-T-C hg38:Y:26670612-T-C A*
hg19:Y:26331447-C-T hg38:Y:24185300-C-T P1_Y1 A*
hg38:Y:10754717-CTCCAT-C ***+
hg19:Y:7816221-T-C hg38:Y:7948180-T-C FT115598 YY*+
hg19:Y:9144507-A-T hg38:Y:9306898-A-T FT116102 Y*+
hg19:Y:24360242-G-A hg38:Y:22214095-G-A FT119908 *+
hg19:Y:5817769-G-A hg38:Y:5949728-G-A FT114705 +
hg19:Y:7380590-C-A hg38:Y:7512549-C-A FT115429 Y+
hg19:Y:7227227-AAAC-A hg38:Y:7359186-AAAC-A 5×AAC*
hg19:Y:7078749-G-A hg38:Y:7210708-G-A PF6154 M610 CTS903 YY*
hg19:Y:8053594-G-A hg38:Y:8185553-G-A PF6160 M629 F1088 YY*
hg19:Y:16563407-G-T hg38:Y:14451527-G-T PF6192 M698 CTS5936 YY*
hg19:Y:18981055-A-G hg38:Y:16869175-A-G CTS9596 M745 PF6205 V3655 YY*
hg19:Y:19470788-GA-G hg38:Y:17358908-GA-G *
hg19:Y:21462912-A-C hg38:Y:19301026-A-C M775 PF6215 YY*
hg19:Y:22589002-T-C hg38:Y:20427116-T-C Y216 M784 YY*
hg19:Y:23473201-T-A hg38:Y:21311315-T-A L146/M420[R1a]L146 M420 PF6229 YY*
hg19:Y:17794888-C-T hg38:Y:15683008-C-T M726 CTS8008 YY*
hg19:Y:2782774-A-G hg38:Y:2914733-A-G YP4133 YY*
hg19:Y:6632539-G-GA hg38:Y:6764498-G-GA 8×A**
hg19:Y:6658294-G-T hg38:Y:6790253-G-T YP4137 YY*
hg19:Y:7619756-A-T hg38:Y:7751715-A-T YP4143 YY*
hg19:Y:8613459-C-T hg38:Y:8745418-C-T YP4151 YY*
hg19:Y:8909541-A-G hg38:Y:9041500-A-G YP4156 *
hg19:Y:9960719-C-A hg38:Y:10123110-C-A Z40884 Y*
hg19:Y:14177395-T-C hg38:Y:12056689-T-C YP4163 YY*
hg19:Y:14328541-A-G hg38:Y:12207835-A-G YP4166 YY*
hg19:Y:15050907-C-T hg38:Y:12938998-C-T YP4176 YY*
hg19:Y:15537806-T-C hg38:Y:13425926-T-C YP4181 YY*
hg19:Y:16211989-G-T hg38:Y:14100109-G-T YP4185 YY*
hg19:Y:16392714-A-G hg38:Y:14280834-A-G YP4186 YY*
hg19:Y:16542906-G-A hg38:Y:14431026-G-A YP4188 YY*
hg19:Y:16614057-G-A hg38:Y:14502177-G-A YP4189 YY*
hg19:Y:17298695-G-A hg38:Y:15186815-G-A YP4195 YY*
hg19:Y:17354664-C-T hg38:Y:15242784-C-T YP4196 YY*
hg19:Y:17833716-G-A hg38:Y:15721836-G-A YP4198 YY*
hg19:Y:18650162-A-G hg38:Y:16538282-A-G YP4202 YY*
hg19:Y:18802316-CACAA-C hg38:Y:16690436-CACAA-C *
hg19:Y:22139216-A-G hg38:Y:19977330-A-G YP4213 YY*
hg19:Y:22478980-C-G hg38:Y:20317094-C-G BY25434 DYZ19 *
hg19:Y:22565846-C-T hg38:Y:20403960-C-T YP4215 YY*
hg19:Y:22943053-T-G hg38:Y:20781167-T-G YP4221 YY*
hg19:Y:23612898-C-A hg38:Y:21451012-C-A YP4226 YY*
hg19:Y:23648751-G-T hg38:Y:21486865-G-T YP4227 Y*
hg19:Y:24502604-A-G hg38:Y:22356457-A-G YP4231 *
hg19:Y:5446428-C-A hg38:Y:5578387-C-A **
hg19:Y:3733012-C-T hg38:Y:3864971-C-T FGC66055 **
hg19:Y:5808587-C-T hg38:Y:5940546-C-T **
hg19:Y:14352669-G-A hg38:Y:12231964-G-A CTS2536 PF3707 **
hg19:Y:17923805-G-A hg38:Y:15811925-G-A Z6796 **
hg19:Y:13445995-G-C hg38:Y:11290319-G-C **
hg19:Y:27561650-C-A hg38:Y:25415503-C-A P1_Y2 **
hg19:Y:13141222-C-G hg38:Y:10630708-C-G **
hg38:Y:11022037-AT-A **
hg38:Y:11664465-G-T DYZ17 **
hg38:Y:10770742-AAC-A **
hg38:Y:10770751-G-C **
hg38:Y:10770753-T-A **
hg19:Y:28778852-C-CT hg38:Y:26632705-C-CT 33×T**
hg38:Y:10947817-G-T **
hg38:Y:10947818-T-C **
hg38:Y:56850339-TA-T **
hg19:Y:4017137-C-A hg38:Y:4149096-C-A **
hg38:Y:10688793-T-A **
hg19:Y:22713226-C-A hg38:Y:20551340-C-A **
hg19:Y:7197329-C-A hg38:Y:7329288-C-A **
hg38:Y:10688776-G-C FT429109 **
hg19:Y:3407742-C-A hg38:Y:3539701-C-A **
hg38:Y:10804491-C-T FT218761 **
hg19:Y:24115140-C-A hg38:Y:21968993-C-A P3_b1 **
hg38:Y:10880720-T-C **
hg19:Y:20404492-G-C hg38:Y:18242606-G-C P5_Dst **
hg19:Y:28754908-T-G hg38:Y:26608761-T-G **
hg38:Y:10982947-T-A **
hg38:Y:10947823-C-T **
hg38:Y:10947827-A-T **
hg38:Y:10947848-T-C **
hg38:Y:10947861-C-T **
hg38:Y:10947879-T-A **
hg38:Y:10933009-A-C **
hg19:Y:19112517-T-G hg38:Y:17000637-T-G **
hg38:Y:10791163-G-T **
hg38:Y:10950388-G-GTTCCATTCCA **
hg19:Y:19925907-C-A hg38:Y:17814027-C-A P5_Prx **
hg38:Y:10761786-A-T **
hg19:Y:14871329-C-A hg38:Y:12759399-C-A **
hg19:Y:27847759-TG-T hg38:Y:25701612-TG-T P1_Y2 **
hg38:Y:11022024-T-A **
hg38:Y:10947800-T-C **
hg38:Y:10947809-T-A **
hg38:Y:10947833-G-C **
hg38:Y:10883478-G-T **
hg38:Y:11666676-A-T DYZ17 **
hg19:Y:19304218-C-A hg38:Y:17192338-C-A **
hg38:Y:10900873-C-A **
hg19:Y:4272622-C-A hg38:Y:4404581-C-A **
hg38:Y:10760965-C-T **
hg38:Y:10956371-T-C **
hg19:Y:17504953-C-A hg38:Y:15393073-C-A **
hg19:Y:4353831-C-A hg38:Y:4485790-C-A **
hg19:Y:26073061-TG-T hg38:Y:23926914-TG-T P1_Y1 **
hg19:Y:17584295-C-T hg38:Y:15472415-C-T **
hg19:Y:17104041-T-G hg38:Y:14992161-T-G **
hg38:Y:10834953-C-T **
hg19:Y:23127589-C-A hg38:Y:20965703-C-A **
hg38:Y:10666226-C-A **
hg19:Y:9509465-C-A hg38:Y:9671856-C-A **
hg38:Y:10688257-C-T **
hg38:Y:10815169-C-A **
hg19:Y:6642258-C-A hg38:Y:6774217-C-A **
hg38:Y:10937716-GATCCA-T **
hg38:Y:10937735-TAATCC-T **
hg38:Y:10937796-A-ATTCCT **
hg38:Y:10781135-T-C **
hg38:Y:10781146-C-G **
hg38:Y:10781151-C-G **
hg38:Y:10973098-C-A **
hg19:Y:19031431-A-G hg38:Y:16919551-A-G **
hg19:Y:22166537-T-TC hg38:Y:20004651-T-TC **
hg19:Y:13216595-C-A hg38:Y:11060919-C-A **
hg19:Y:14743810-C-A hg38:Y:12631879-C-A **
hg19:Y:5668840-G-T hg38:Y:5800799-G-T **
hg38:Y:10900838-C-G **
hg38:Y:10900843-C-T **
hg38:Y:10900847-T-C **
hg38:Y:10900862-TC-T **
hg38:Y:10900880-CCTACT-C **
hg38:Y:10900898-C-A **
hg19:Y:16096239-C-A hg38:Y:13984359-C-A **
hg38:Y:10955551-C-A **
hg19:Y:13576122-CTTTT-C hg38:Y:11420446-CTTTT-C 14×T**
hg38:Y:10999079-T-C **
hg38:Y:10933537-C-A **
hg38:Y:10688800-T-C **
hg38:Y:10688807-C-A **
hg38:Y:10688817-T-C **
hg19:Y:13271720-C-A hg38:Y:11116044-C-A **
hg19:Y:13453165-A-C hg38:Y:11297489-A-C **
hg19:Y:28545721-A-C hg38:Y:26399574-A-C **
hg38:Y:10810646-G-T **
hg38:Y:11659037-C-A DYZ17 **
hg38:Y:10844832-C-A **
hg19:Y:22253158-T-C hg38:Y:20091272-T-C DYZ19 **
hg19:Y:23128709-C-A hg38:Y:20966823-C-A **
hg38:Y:10900816-C-G **
hg38:Y:10900830-T-A **
hg19:Y:16232463-C-A hg38:Y:14120583-C-A **
hg38:Y:9110417-G-T **
hg19:Y:2758776-G-C hg38:Y:2890735-G-C **
hg38:Y:10804584-G-T **
hg19:Y:28594231-T-C hg38:Y:26448084-T-C **
hg19:Y:13248774-T-G hg38:Y:11093098-T-G **
hg19:Y:16121685-A-AG hg38:Y:14009805-A-AG P8_Prx **
hg19:Y:6165662-CAAA-C hg38:Y:6297621-CAAA-C IR3_Dst 13×A**
hg19:Y:15858292-C-A hg38:Y:13746412-C-A **
hg19:Y:2729699-T-G hg38:Y:2861658-T-G **
hg19:Y:2900741-C-G hg38:Y:3032700-C-G **
hg19:Y:3034925-T-C hg38:Y:3166884-T-C **
hg19:Y:3057811-C-A hg38:Y:3189770-C-A **
hg19:Y:3110448-C-G hg38:Y:3242407-C-G FT268 **
hg19:Y:3190545-T-C hg38:Y:3322504-T-C **
hg19:Y:3359502-A-C hg38:Y:3491461-A-C **
hg19:Y:3362449-C-A hg38:Y:3494408-C-A **
hg19:Y:3499950-A-AT hg38:Y:3631909-A-AT 9×T**
hg19:Y:3657344-G-T hg38:Y:3789303-G-T **
hg19:Y:3691594-C-A hg38:Y:3823553-C-A **
hg19:Y:3945045-G-T hg38:Y:4077004-G-T **
hg19:Y:4070050-C-G hg38:Y:4202009-C-G FT206277 **
hg19:Y:4188239-C-A hg38:Y:4320198-C-A **
hg19:Y:4188336-A-T hg38:Y:4320295-A-T **
hg19:Y:4192829-C-A hg38:Y:4324788-C-A **
hg19:Y:4244870-C-A hg38:Y:4376829-C-A **
hg19:Y:4439872-G-T hg38:Y:4571831-G-T **
hg19:Y:4550953-G-T hg38:Y:4682912-G-T **
hg19:Y:4876490-C-A hg38:Y:5008449-C-A **
hg19:Y:5015851-T-G hg38:Y:5147810-T-G **
hg19:Y:5039204-G-T hg38:Y:5171163-G-T **
hg19:Y:5126793-C-A hg38:Y:5258752-C-A **
hg19:Y:5359655-G-T hg38:Y:5491614-G-T **
hg19:Y:5367761-A-T hg38:Y:5499720-A-T **
hg19:Y:5465521-G-T hg38:Y:5597480-G-T **
hg19:Y:5620178-C-A hg38:Y:5752137-C-A **
hg19:Y:5650550-C-A hg38:Y:5782509-C-A **
hg19:Y:5732375-G-T hg38:Y:5864334-G-T **
hg19:Y:5761508-C-A hg38:Y:5893467-C-A **
hg19:Y:5761515-C-A hg38:Y:5893474-C-A **
hg19:Y:5869646-C-T hg38:Y:6001605-C-T **
hg19:Y:6431864-C-A hg38:Y:6563823-C-A **
hg19:Y:6699011-C-T hg38:Y:6830970-C-T ****
hg19:Y:6830286-C-A hg38:Y:6962245-C-A **
hg19:Y:7044446-A-G hg38:Y:7176405-A-G **
hg19:Y:7078438-C-A hg38:Y:7210397-C-A **
hg19:Y:7123628-C-A hg38:Y:7255587-C-A **
hg19:Y:7148114-A-G hg38:Y:7280073-A-G **
hg19:Y:7152962-C-A hg38:Y:7284921-C-A **
hg19:Y:7248574-A-C hg38:Y:7380533-A-C **
hg19:Y:7303778-C-A hg38:Y:7435737-C-A **
hg19:Y:7307649-C-A hg38:Y:7439608-C-A **
hg19:Y:7309943-A-G hg38:Y:7441902-A-G **
hg19:Y:7829542-G-T hg38:Y:7961501-G-T **
hg19:Y:8036064-C-A hg38:Y:8168023-C-A **
hg19:Y:8036093-G-T hg38:Y:8168052-G-T **
hg19:Y:8036103-G-C hg38:Y:8168062-G-C **
hg19:Y:8036114-G-C hg38:Y:8168073-G-C **
hg19:Y:8154067-C-A hg38:Y:8286026-C-A **
hg19:Y:8855558-C-A hg38:Y:8987517-C-A **
hg19:Y:9511748-C-A hg38:Y:9674139-C-A **
hg19:Y:9941407-C-A hg38:Y:10103798-C-A **
hg19:Y:9991287-A-G hg38:Y:10153678-A-G **
hg19:Y:10000288-C-A hg38:Y:10162679-C-A **
hg19:Y:10054361-G-T hg38:Y:10216752-G-T **
hg38:Y:10630016-C-A **
hg38:Y:10661929-C-A **
hg38:Y:10665325-A-G **
hg38:Y:10670741-A-T **
hg38:Y:10685068-A-T **
hg38:Y:10688812-T-C **
hg38:Y:10689169-A-T **
hg38:Y:10692103-TCCAC-T **
hg38:Y:10692111-GCCT-G **
hg38:Y:10749086-C-T **
hg38:Y:10749099-C-T **
hg38:Y:10749154-T-C **
hg38:Y:10757139-C-A **
hg38:Y:10787354-C-G **
hg38:Y:10791128-CA-C **
hg38:Y:10791170-C-G **
hg38:Y:10791180-G-A **
hg38:Y:10796335-ACATTCCACTCCACTCCATTTCCCTT-A **
hg38:Y:10806530-C-A **
hg38:Y:10806550-C-A **
hg38:Y:10844833-G-T **
hg38:Y:10872494-C-A **
hg38:Y:10884484-CTGCACTCCGA-C **
hg38:Y:10890127-A-G **
hg38:Y:10905435-G-T **
hg38:Y:10914803-G-A **
hg38:Y:10919677-C-A **
hg38:Y:10921699-C-T **
hg38:Y:10937749-TTACTC-T **
hg38:Y:10951585-C-A **
hg38:Y:10951991-C-G **
hg38:Y:10952001-A-T **
hg38:Y:10954312-A-C **
hg38:Y:10960783-C-A **
hg38:Y:10963229-A-G **
hg38:Y:10982693-C-A **
hg38:Y:10982983-CTTCAT-C **
hg38:Y:10994406-C-A **
hg38:Y:11009078-C-A **
hg38:Y:11031111-G-T **
hg19:Y:13218986-AAGAG-A hg38:Y:11063310-AAGAG-A **
hg19:Y:13309689-G-T hg38:Y:11154013-G-T **
hg19:Y:13486810-C-A hg38:Y:11331134-C-A **
hg19:Y:13493756-A-T hg38:Y:11338080-A-T **
hg19:Y:13540179-C-A hg38:Y:11384503-C-A **
hg19:Y:13726296-C-G hg38:Y:11570620-C-G DYZ17 **
hg19:Y:13726298-C-G hg38:Y:11570622-C-G DYZ17 **
hg19:Y:13726357-A-G hg38:Y:11570681-A-G DYZ17 **
hg38:Y:11663597-A-T DYZ17 **
hg38:Y:11674648-C-A DYZ17 **
hg19:Y:13966389-C-T hg38:Y:11845683-C-T **
hg19:Y:14183425-A-C hg38:Y:12062719-A-C **
hg19:Y:14253123-C-T hg38:Y:12132417-C-T ****
hg19:Y:14293676-C-A hg38:Y:12172970-C-A **
hg19:Y:14367903-G-T hg38:Y:12247199-G-T Y91218 **
hg19:Y:14463407-C-A hg38:Y:12342680-C-A **
hg19:Y:14554438-A-T hg38:Y:12442639-A-T **
hg19:Y:15324128-C-A hg38:Y:13212246-C-A **
hg19:Y:15734389-C-A hg38:Y:13622509-C-A **
hg19:Y:15842666-C-T hg38:Y:13730786-C-T **
hg19:Y:15881900-C-T hg38:Y:13770020-C-T **
hg19:Y:15881901-T-C hg38:Y:13770021-T-C **
hg19:Y:15881904-T-TA hg38:Y:13770024-T-TA **
hg19:Y:15881920-T-C hg38:Y:13770040-T-C **
hg19:Y:15936670-GATTATGAATATC-G hg38:Y:13824790-GATTATGAATATC-G **
hg19:Y:16003908-C-A hg38:Y:13892028-C-A **
hg19:Y:16164442-CA-C hg38:Y:14052562-CA-C P8_Dst **
hg19:Y:16164474-C-CAAA hg38:Y:14052594-C-CAAA P8_Dst 19×A**
hg19:Y:16270858-C-A hg38:Y:14158978-C-A **
hg19:Y:16876977-C-A hg38:Y:14765097-C-A **
hg19:Y:16930835-C-T hg38:Y:14818955-C-T A19001 **
hg19:Y:16938305-T-G hg38:Y:14826425-T-G **
hg19:Y:16971984-C-A hg38:Y:14860104-C-A **
hg19:Y:17061867-G-T hg38:Y:14949987-G-T **
hg19:Y:17379362-G-T hg38:Y:15267482-G-T **
hg19:Y:17379374-G-T hg38:Y:15267494-G-T **
hg19:Y:17545514-A-C hg38:Y:15433634-A-C **
hg19:Y:17723825-C-A hg38:Y:15611945-C-A **
hg19:Y:17898013-C-A hg38:Y:15786133-C-A **
hg19:Y:17923658-G-T hg38:Y:15811778-G-T **
hg19:Y:18008674-T-G hg38:Y:15896794-T-G P7_Dst **
hg19:Y:19547722-C-G hg38:Y:17435842-C-G **
hg19:Y:19737431-C-A hg38:Y:17625551-C-A P5_Prx **
hg19:Y:20534970-C-G hg38:Y:18373084-C-G P5_Dst **
hg19:Y:20616028-A-T hg38:Y:18454142-A-T P4_Prx **
hg19:Y:20685309-G-A hg38:Y:18523423-G-A P4_Prx **
hg19:Y:20840450-A-G hg38:Y:18678564-A-G P4_Gap **
hg19:Y:20953740-A-AC hg38:Y:18791854-A-AC P4_Dst **
hg19:Y:21002524-T-A hg38:Y:18840638-T-A P4_Dst **
hg19:Y:21212792-C-A hg38:Y:19050906-C-A **
hg19:Y:21268864-C-A hg38:Y:19106978-C-A **
hg19:Y:22055525-C-A hg38:Y:19893639-C-A **
hg19:Y:22060440-G-T hg38:Y:19898554-G-T **
hg19:Y:22208995-C-T hg38:Y:20047109-C-T YP4214 **
hg19:Y:22276264-T-G hg38:Y:20114378-T-G DYZ19 **
hg19:Y:22531800-G-A hg38:Y:20369914-G-A **
hg19:Y:22722358-TTTTTG-T hg38:Y:20560472-TTTTTG-T **
hg19:Y:22727294-C-A hg38:Y:20565408-C-A **
hg19:Y:22851461-G-T hg38:Y:20689575-G-T **
hg19:Y:23179969-G-T hg38:Y:21018083-G-T **
hg19:Y:23180001-A-C hg38:Y:21018115-A-C **
hg19:Y:23180015-A-C hg38:Y:21018129-A-C **
hg19:Y:23316114-T-G hg38:Y:21154228-T-G **
hg19:Y:23441337-G-T hg38:Y:21279451-G-T **
hg38:Y:21752732-T-G **
hg19:Y:23955091-C-A hg38:Y:21808944-C-A **
hg19:Y:24148177-G-T hg38:Y:22002030-G-T P3_b1 **
hg19:Y:24389547-A-G hg38:Y:22243400-A-G **
hg19:Y:24389568-T-A hg38:Y:22243421-T-A **
hg19:Y:24512804-G-T hg38:Y:22366657-G-T **
hg19:Y:24877601-A-G hg38:Y:22731454-A-G g1 **
hg19:Y:26018404-T-G hg38:Y:23872257-T-G P1_Y1 **
hg19:Y:27561674-G-T hg38:Y:25415527-G-T P1_Y2 **
hg19:Y:28511227-C-A hg38:Y:26365080-C-A **
hg19:Y:28579808-C-A hg38:Y:26433661-C-A **
hg19:Y:28594230-G-A hg38:Y:26448083-G-A **
hg19:Y:28594234-T-C hg38:Y:26448087-T-C **
hg19:Y:28594235-G-A hg38:Y:26448088-G-A **
hg19:Y:28697263-C-A hg38:Y:26551116-C-A **
hg19:Y:28708192-C-A hg38:Y:26562045-C-A **
hg38:Y:56842237-C-A **
hg38:Y:56860557-A-C **
hg19:Y:23029412-A-G hg38:Y:20867526-A-G **
hg19:Y:6246509-C-A hg38:Y:6378468-C-A IR3_Dst **
hg19:Y:6944943-CAAAAAAAAAA-C hg38:Y:7076902-CAAAAAAAAAA-C 28×A**
hg19:Y:7632462-T-C hg38:Y:7764421-T-C **
hg19:Y:13388559-A-T hg38:Y:11232883-A-T **
hg19:Y:15142183-C-T hg38:Y:13030270-C-T **
hg19:Y:15142184-A-G hg38:Y:13030271-A-G **
hg19:Y:15142207-G-A hg38:Y:13030294-G-A **
hg19:Y:18352133-C-CAG hg38:Y:16240253-C-CAG P6_Prx **
hg19:Y:19909990-A-T hg38:Y:17798110-A-T P5_Prx **
hg19:Y:20483340-A-T hg38:Y:18321454-A-T P5_Dst **
hg19:Y:24334572-A-G hg38:Y:22188425-A-G P3_t1 **
hg19:Y:26243470-G-T hg38:Y:24097323-G-T P1_Y1 **
hg38:Y:56852020-C-T **
hg38:Y:56852035-C-T **
hg19:Y:18656508-C-G hg38:Y:16544628-C-G ***
hg19:Y:15047656-TTC-T hg38:Y:12935747-TTC-T ***
hg19:Y:22462388-T-C hg38:Y:20300502-T-C A12263 DYZ19 ***
hg19:Y:23242746-C-A hg38:Y:21080860-C-A CTS11734 M800 PF6226 ***
hg19:Y:58838634-G-C hg38:Y:56752237-C-G ***
hg19:Y:16834970-C-T hg38:Y:14723090-C-T YP4191 ***
hg19:Y:22510167-G-A hg38:Y:20348281-G-A BY28820 DYZ19 ***
hg19:Y:5313516-TCTTC-T hg38:Y:5445475-TCTTC-T ***
hg38:Y:10746905-TTCAAC-T,TTCCAC ***
hg38:Y:10995855-C-CA,G ***
hg19:Y:13441811-C-A hg38:Y:11286135-C-A ***
hg19:Y:4172185-C-A hg38:Y:4304144-C-A ***
hg19:Y:21402215-T-A hg38:Y:19240329-T-A ***
hg38:Y:10885109-C-A ***
hg38:Y:10864648-C-G ***
hg38:Y:10666942-T-A ***
hg19:Y:2810366-AT-A,ATT hg38:Y:2942325-AT-A,ATT 23×T***
hg38:Y:10870699-C-A ***
hg19:Y:5782088-T-C hg38:Y:5914047-T-C ***
hg19:Y:8472625-C-T hg38:Y:8604584-C-T YP4149 ***
hg38:Y:10824396-C-A ***
hg38:Y:10929732-C-A ***
hg38:Y:10958354-CATTCCATTCCATTCCATTCC-C,CATTCCATTCCTTTCCATTCA ***
hg38:Y:10995852-T-C,TCCAT ***
hg38:Y:11000057-T-A ***
hg19:Y:13404798-GC-G hg38:Y:11249122-GC-G ***
hg38:Y:11647097-G-T DYZ17 ***
hg19:Y:14452668-G-T hg38:Y:12331941-G-T ***
hg19:Y:14527080-C-A hg38:Y:12415281-C-A ***
hg19:Y:14621357-G-C hg38:Y:12509555-G-C YP4170 ***
hg19:Y:15383880-A-T hg38:Y:13272000-A-T YP4178 ***
hg19:Y:16943565-C-A hg38:Y:14831685-C-A ***
hg19:Y:18738649-T-C hg38:Y:16626769-T-C ***
hg19:Y:19307866-A-T hg38:Y:17195986-A-T YP4204 ***
hg19:Y:21546071-C-A hg38:Y:19384185-C-A YP4208 ***
hg19:Y:21912137-G-T hg38:Y:19750251-G-T ***
hg19:Y:21929600-GTATATATATA-G hg38:Y:19767714-GTATATATATA-G 12×TA***
hg19:Y:22973150-A-G hg38:Y:20811264-A-G YP4222 ***
hg19:Y:23291915-T-C hg38:Y:21130029-T-C YP4225 ***
hg19:Y:24450722-T-C hg38:Y:22304575-T-C ***
hg19:Y:4474281-A-AT hg38:Y:4606240-A-AT 9×T***
hg19:Y:9075188-CTTT-C,CTT hg38:Y:9237579-CTTT-C,CTT 20×T***
hg19:Y:19187413-TG-G,T hg38:Y:17075533-TG-G,T ***
hg19:Y:22428281-C-A hg38:Y:20266395-C-A DYZ19 ***
hg19:Y:13455838-C-G hg38:Y:11300162-C-G ***
hg19:Y:3957627-AAT-A hg38:Y:4089586-AAT-A ***
hg38:Y:10958311-CTCCATTCCATTCCATTCCAT-C ***
hg19:Y:13474642-T-C hg38:Y:11318966-T-C ***
hg19:Y:14278524-A-G hg38:Y:12157818-A-G ***
hg19:Y:18565234-CTTAT-C,CTTATTTAT hg38:Y:16453354-CTTAT-C,CTTATTTAT 12×TTAT***
hg19:Y:21346975-TTA-T hg38:Y:19185089-TTA-T 29×TA***
hg19:Y:22639379-T-C hg38:Y:20477493-T-C ***
hg19:Y:23346026-T-C hg38:Y:21184140-T-C ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 555100968922778381457716013
Kit: 5551001506688694317998351989
Used in age calculations1506688694317998351989
Counts of SNPs3735
Variant counts last updated 2026-03-13 02:53:57.


Big Tree Main Page