Turppa
BigY2: N140041MDKA Birth: Finland
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 N140041 |
---|---|---|---|---|---|---|---|---|
13433744-C-A | 11278068-C-A | ** | ||||||
6756908-CAAA-C | 6888867-CAAA-C | 26×A | ** | |||||
18188493-C-T | 16076613-C-T | ** | ||||||
15290083-C-A | 13178182-C-A | ** | ||||||
20025443-CTCT-C | 17913563-CTCT-C | P5_Prx | ** | |||||
13801423-C-A | 11680717-C-A | ** | ||||||
2810429-A-T | 2942388-A-T | ** | ||||||
16904659-G-T | 14792779-G-T | ** | ||||||
13208031-C-A | 11052355-C-A | ** | ||||||
3889566-C-A | 4021525-C-A | ** | ||||||
16278595-C-A | 14166715-C-A | ** | ||||||
10766291-T-C | ** | |||||||
10766292-C-T | ** | |||||||
10766317-A-C | FT430270 | ** | ||||||
2790205-A-G | 2922164-A-G | ** | ||||||
16150948-TAAAA-T | 14039068-TAAAA-T | P8_Dst | 22×A | ** | ||||
16938218-CTTTTTT-C | 14826338-CTTTTTT-C | 19×T | ** | |||||
13258459-C-A | 11102783-C-A | ** | ||||||
9955395-C-A | 10117786-C-A | ** | ||||||
16662483-C-A | 14550603-C-A | ** | ||||||
4605076-C-A | 4737035-C-A | ** | ||||||
10857850-T-C | ** | |||||||
9056269-C-A | ** | |||||||
15276778-C-A | 13164867-C-A | ** | ||||||
22172543-G-T | 20010657-G-T | ** | ||||||
7172457-C-A | 7304416-C-A | ** | ||||||
7360567-TAA-T | 7492526-TAA-T | 13×A | ** | |||||
16048937-C-A | 13937057-C-A | ** | ||||||
6918534-T-A | 7050493-T-A | ** | ||||||
14585408-G-T | 12473608-G-T | ** | ||||||
6751230-C-G | 6883189-C-G | FT397780 | ** | |||||
23034384-G-T | 20872498-G-T | ** | ||||||
10766295-C-A | ** | |||||||
13943175-C-A | 11822469-C-A | ** | ||||||
20001318-A-C | 17889438-A-C | P5_Prx | ** | |||||
16583392-GAA-G | 14471512-GAA-G | 10×A | ** | |||||
10979390-T-C | ** | |||||||
10759847-T-C | ** | |||||||
10748936-A-C | ** | |||||||
17825085-G-T | 15713205-G-T | ** | ||||||
10769711-TTTCCA-T | ** | |||||||
15491939-GTGTATATA-G | 13380059-GTGTATATA-G | ** | ||||||
14324993-C-T | 12204287-C-T | ** | ||||||
10964826-C-A | ** | |||||||
2840075-C-A | 2972034-C-A | ** | ||||||
4874856-G-T | 5006815-G-T | ** | ||||||
24420860-C-A | 22274713-C-A | ** | ||||||
10907704-T-A | ** | |||||||
4114813-C-A | 4246772-C-A | ** | ||||||
10907865-G-T | ** | |||||||
10767214-AT-A | BY14605 | ** | ||||||
10992682-C-A | ** | |||||||
10768561-C-A | ** | |||||||
3695986-C-A | 3827945-C-A | ** | ||||||
23034377-G-A | 20872491-G-A | A19700 | ** | |||||
17666655-C-A | 15554775-C-A | ** | ||||||
16786134-CAAA-C | 14674254-CAAA-C | 13×A | ** | |||||
17095292-C-A | 14983412-C-A | ** | ||||||
2772911-C-A | 2904870-C-A | ** | ||||||
6925695-T-A | 7057654-T-A | ** | ||||||
10018333-T-G | 10180724-T-G | ** | ||||||
14512094-C-A | 12400299-C-A | ** | ||||||
17929123-C-A | 15817243-C-A | ** | ||||||
16424889-G-T | 14313009-G-T | ** | ||||||
7243756-C-A | 7375715-C-A | ** | ||||||
15790483-C-A | 13678603-C-A | ** | ||||||
24513601-C-A | 22367454-C-A | ** | ||||||
15791127-C-A | 13679247-C-A | ** | ||||||
15988139-C-A | 13876259-C-A | ** | ||||||
10768566-C-A | ** | |||||||
6402692-T-A | 6534651-T-A | ** | ||||||
14754130-G-A | 12642199-G-A | ** | ||||||
21802877-C-A | 19640991-C-A | ** | ||||||
22619377-C-A | 20457491-C-A | ** | ||||||
56861890-G-GA | ** | |||||||
56861924-A-G | ** | |||||||
14507706-C-A | 12395911-C-A | ** | ||||||
26463138-G-A | 24316991-G-A | P1_Y1 | ** | |||||
23034360-G-A | 20872474-G-A | ** | ||||||
11677098-A-G | ** | |||||||
10995603-C-A | ** | |||||||
10793257-C-T | ** | |||||||
3491610-C-A | 3623569-C-A | ** | ||||||
6384470-C-G | 6516429-C-G | ** | ||||||
17006448-G-GTA | 14894568-G-GTA | ** | ||||||
10845653-T-A | ** | |||||||
14589071-C-A | 12477271-C-A | ** | ||||||
10793269-C-A | ** | |||||||
16070761-C-A | 13958881-C-A | ** | ||||||
21853598-C-A | 19691712-C-A | ** | ||||||
24671167-T-A | 22525020-T-A | P3_b2 | ** | |||||
10760007-C-T | ** | |||||||
10793270-T-A | ** | |||||||
4586107-C-A | 4718066-C-A | ** | ||||||
19302618-G-T | 17190738-G-T | ** | ||||||
10824964-TCATTC-T | ** | |||||||
15769091-C-A | 13657211-C-A | ** | ||||||
11024453-CTCCAT-C | BY82600 | ** | ||||||
2688815-A-G | 2820774-A-G | ** | ||||||
2688818-A-G | 2820777-A-G | ** | ||||||
19258926-C-A | 17147046-C-A | ** | ||||||
17479075-G-A | 15367195-G-A | FT128979 | ** | |||||
14011440-C-A | 11890734-C-A | ** | ||||||
21473810-C-A | 19311924-C-A | ** | ||||||
23316113-C-A | 21154227-C-A | ** | ||||||
7286968-C-A | 7418927-C-A | ** | ||||||
19393213-C-A | 17281333-C-A | ** | ||||||
3032524-C-A | 3164483-C-A | ** | ||||||
15532543-C-A | 13420663-C-A | ** | ||||||
13938160-C-A | 11817454-C-A | ** | ||||||
10993163-C-A | ** | |||||||
10979485-C-A | ** | |||||||
16933104-C-A | 14821224-C-A | ** | ||||||
16421136-C-T | 14309256-C-T | ** | ||||||
10892765-C-A | ** | |||||||
28499463-C-A | 26353316-C-A | ** | ||||||
6751350-C-A | 6883309-C-A | ** | ||||||
9603142-G-T | 9765533-G-T | IR3_Prx | ** | |||||
10759978-T-A | ** | |||||||
16636660-C-A | 14524780-C-A | ** | ||||||
10760009-C-CCACAA | ** | |||||||
10760019-C-G | ** | |||||||
3367071-C-A | 3499030-C-A | ** | ||||||
14357804-C-A | 12237099-C-A | ** | ||||||
15927696-C-A | 13815816-C-A | ** | ||||||
28155853-G-T | 26009706-G-T | P1_b4 | ** | |||||
13207941-T-C | 11052265-T-C | ** | ||||||
56850069-G-T | ** | |||||||
14516892-C-A | 12405093-C-A | ** | ||||||
22128000-TG-T | 19966114-TG-T | ** | ||||||
14339413-C-A | 12218708-C-A | FT91197 | ** | |||||
9991122-C-A | 10153513-C-A | ** | ||||||
10963212-C-A | ** | |||||||
22965702-C-A | 20803816-C-A | ** | ||||||
13598507-C-A | 11442831-C-A | ** | ||||||
10809064-A-T | ** | |||||||
21853611-G-A | 19691725-G-A | ** | ||||||
7299240-C-A | 7431199-C-A | ** | ||||||
6751206-G-A | 6883165-G-A | ** | ||||||
6751239-G-A | 6883198-G-A | ** | ||||||
6751246-T-A | 6883205-T-A | ** | ||||||
14050104-C-A | 11929398-C-A | ** | ||||||
8737852-C-A | 8869811-C-A | ** | ||||||
10942142-T-C | ** | |||||||
6769873-C-A | 6901832-C-A | ** | ||||||
22092916-T-G | 19931030-T-G | ** | ||||||
56847258-G-T | ** | |||||||
2683191-C-A | 2815150-C-A | ** | ||||||
2688814-C-T | 2820773-C-T | ** | ||||||
2738823-T-C | 2870782-T-C | ** | ||||||
2744782-C-A | 2876741-C-A | ** | ||||||
2775281-C-A | 2907240-C-A | ** | ||||||
2795584-G-TT | 2927543-G-TT | ** | ||||||
2859021-C-A | 2990980-C-A | ** | ||||||
2916107-C-A | 3048066-C-A | ** | ||||||
2948951-A-T | 3080910-A-T | ** | ||||||
2973436-T-C | 3105395-T-C | ** | ||||||
3023629-C-A | 3155588-C-A | ** | ||||||
3045552-A-C | 3177511-A-C | ** | ||||||
3126540-C-A | 3258499-C-A | ** | ||||||
3174167-T-A | 3306126-T-A | ** | ||||||
3246371-T-G | 3378330-T-G | 6×TTTG | ** | |||||
3341467-G-T | 3473426-G-T | ** | ||||||
3341508-A-T | 3473467-A-T | ** | ||||||
3502698-C-A | 3634657-C-A | FT94290 | ** | |||||
3550557-A-G | 3682516-A-G | ** | ||||||
3559523-C-A | 3691482-C-A | ** | ||||||
3593280-C-A | 3725239-C-A | ** | ||||||
3677962-G-T | 3809921-G-T | ** | ||||||
3728693-T-G | 3860652-T-G | ** | ||||||
3790432-C-A | 3922391-C-A | ** | ||||||
3811096-T-C | 3943055-T-C | ** | ||||||
3834212-C-A | 3966171-C-A | ** | ||||||
3839424-T-C | 3971383-T-C | ** | ||||||
3844694-C-A | 3976653-C-A | ** | ||||||
3940628-C-A | 4072587-C-A | ** | ||||||
4045825-G-T | 4177784-G-T | ** | ||||||
4076155-G-C | 4208114-G-C | ** | ||||||
4087928-A-G | 4219887-A-G | ** | ||||||
4099358-C-A | 4231317-C-A | ** | ||||||
4101173-A-T | 4233132-A-T | ** | ||||||
4157515-CCTTGTTTGGA-C | 4289474-CCTTGTTTGGA-C | ** | ||||||
4223074-C-G | 4355033-C-G | ** | ||||||
4226099-T-C | 4358058-T-C | ** | ||||||
4230118-A-G | 4362077-A-G | ** | ||||||
4240749-C-A | 4372708-C-A | ** | ||||||
4241920-C-A | 4373879-C-A | ** | ||||||
4433507-T-G | 4565466-T-G | ** | ||||||
4527187-C-A | 4659146-C-A | ** | ||||||
4538411-T-A | 4670370-T-A | ** | ||||||
4541237-G-T | 4673196-G-T | ** | ||||||
4551774-G-T | 4683733-G-T | ** | ||||||
4560330-G-T | 4692289-G-T | ** | ||||||
4607038-T-C | 4738997-T-C | ** | ||||||
4754507-C-A | 4886466-C-A | ** | ||||||
4832572-G-T | 4964531-G-T | ** | ||||||
4832635-G-A | 4964594-G-A | ** | ||||||
4832681-C-A | 4964640-C-A | ** | ||||||
4854420-AT-A | 4986379-AT-A | ** | ||||||
4888219-A-C | 5020178-A-C | ** | ||||||
4970103-G-T | 5102062-G-T | ** | ||||||
5022965-G-T | 5154924-G-T | ** | ||||||
5026107-C-A | 5158066-C-A | ** | ||||||
5029606-G-T | 5161565-G-T | ** | ||||||
5060261-C-A | 5192220-C-A | ** | ||||||
5109913-T-A | 5241872-T-A | ** | ||||||
5165342-C-A | 5297301-C-A | ** | ||||||
5174341-A-ACG | 5306300-A-ACG | ** | ||||||
5174392-T-A | 5306351-T-A | ** | ||||||
5190643-G-T | 5322602-G-T | ** | ||||||
5197301-A-G | 5329260-A-G | ** | ||||||
5358448-C-A | 5490407-C-A | ** | ||||||
5409733-TTTC-T | 5541692-TTTC-T | ** | ||||||
5446512-C-A | 5578471-C-A | ** | ||||||
5447894-T-A | 5579853-T-A | ** | ||||||
5471704-C-A | 5603663-C-A | ** | ||||||
5472202-C-A | 5604161-C-A | ** | ||||||
5560795-C-A | 5692754-C-A | ** | ||||||
5572983-T-C | 5704942-T-C | ** | ||||||
5648175-T-A | 5780134-T-A | ** | ||||||
5775120-T-C | 5907079-T-C | ** | ||||||
5793596-G-A | 5925555-G-A | ** | ||||||
5873531-G-C | 6005490-G-C | ** | ||||||
5912128-C-A | 6044087-C-A | ** | ||||||
5924638-A-G | 6056597-A-G | ** | ||||||
5991791-C-A | 6123750-C-A | ** | ||||||
5992617-G-T | 6124576-G-T | ** | ||||||
6039541-C-A | 6171500-C-A | ** | ||||||
6352629-A-G | 6484588-A-G | ** | ||||||
6353623-C-A | 6485582-C-A | ** | ||||||
6402658-A-G | 6534617-A-G | ** | ||||||
6454729-C-A | 6586688-C-A | ** | ||||||
6634214-C-A | 6766173-C-A | ** | ||||||
6694346-C-A | 6826305-C-A | ** | ||||||
6712532-G-T | 6844491-G-T | ** | ||||||
6713911-G-T | 6845870-G-T | ** | ||||||
6751242-C-T | 6883201-C-T | ** | ||||||
6831322-C-A | 6963281-C-A | ** | ||||||
6882251-C-A | 7014210-C-A | ** | ||||||
6892002-C-A | 7023961-C-A | ** | ||||||
7042016-A-G | 7173975-A-G | ** | ||||||
7063360-C-G | 7195319-C-G | ** | ||||||
7111857-C-A | 7243816-C-A | ** | ||||||
7140967-A-G | 7272926-A-G | ** | ||||||
7169905-C-A | 7301864-C-A | ** | ||||||
7199491-C-A | 7331450-C-A | ** | ||||||
7225467-C-T | 7357426-C-T | ** | ||||||
7229072-C-A | 7361031-C-A | ** | ||||||
7241991-C-A | 7373950-C-A | ** | ||||||
7383786-G-T | 7515745-G-T | ** | ||||||
7385948-C-A | 7517907-C-A | ** | ||||||
7422499-C-T | 7554458-C-T | ** | ||||||
7579005-C-A | 7710964-C-A | ** | ||||||
7860177-G-A | 7992136-G-A | ** | ||||||
7898231-G-T | 8030190-G-T | ** | ||||||
8043244-T-C | 8175203-T-C | ** | ||||||
8218200-T-G | 8350159-T-G | ** | ||||||
8325527-A-G | 8457486-A-G | ** | ||||||
8371689-AT-A | 8503648-AT-A | ** | ||||||
8692059-C-A | 8824018-C-A | ** | ||||||
8735380-T-A | 8867339-T-A | ** | ||||||
8762181-T-C | 8894140-T-C | ** | ||||||
9123346-A-G | ** | |||||||
8988460-A-T | 9150851-A-T | ** | ||||||
9013251-C-A | 9175642-C-A | ** | ||||||
9034632-G-T | 9197023-G-T | ** | ||||||
9193072-A-C | 9355463-A-C | ** | ||||||
9499538-G-T | 9661929-G-T | ** | ||||||
9511710-A-G | 9674101-A-G | ** | ||||||
9624860-G-T | 9787251-G-T | IR3_Prx | ** | |||||
9852976-A-G | 10015367-A-G | ** | ||||||
9908478-G-C | 10070869-G-C | ** | ||||||
9990034-G-T | 10152425-G-T | ** | ||||||
10026949-C-A | 10189340-C-A | ** | ||||||
10654544-C-A | ** | |||||||
10661046-C-T | ** | |||||||
10662702-T-C | ** | |||||||
10757055-C-A | ** | |||||||
10758516-C-A | ** | |||||||
10763750-C-T | ** | |||||||
10768565-A-C | ** | |||||||
10796339-T-G | ** | |||||||
10797061-C-A | ** | |||||||
10807565-C-A | ** | |||||||
10808279-C-A | ** | |||||||
10809062-C-A | ** | |||||||
10809074-A-G | ** | |||||||
10809094-G-C | ** | |||||||
10809094-GTTTCTTTCGA-G | ** | |||||||
10824802-C-A | ** | |||||||
10830228-C-A | ** | |||||||
10832383-T-G | ** | |||||||
10832393-T-G | ** | |||||||
10838780-T-C | ** | |||||||
10842208-C-A | ** | |||||||
10843374-T-C | ** | |||||||
10844372-C-T | ** | |||||||
10847944-T-C | ** | |||||||
10856709-C-A | ** | |||||||
10862972-A-C | ** | |||||||
10864002-C-A | ** | |||||||
10866092-C-T | ** | |||||||
10869889-C-G | ** | |||||||
10879515-C-A | ** | |||||||
10887952-C-T | ** | |||||||
10890076-C-A | ** | |||||||
10921426-C-A | ** | |||||||
10935385-T-G | ** | |||||||
10938820-C-A | ** | |||||||
10939531-C-A | ** | |||||||
10943874-C-A | FT437609 | ** | ||||||
10944644-C-T | ** | |||||||
10951121-C-A | ** | |||||||
10956803-C-A | ** | |||||||
10973582-T-G | ** | |||||||
10979121-C-A | ** | |||||||
10979143-C-T | ** | |||||||
10986338-C-T | ** | |||||||
10988918-G-T | ** | |||||||
10992712-C-A | ** | |||||||
11003818-C-A | ** | |||||||
11006883-C-A | ** | |||||||
11012086-C-A | ** | |||||||
11021135-C-A | ** | |||||||
11027022-A-C | ** | |||||||
11029631-TC-T | ** | |||||||
11032863-C-A | ** | |||||||
13213546-G-A | 11057870-G-A | ** | ||||||
13235701-C-A | 11080025-C-A | ** | ||||||
13236709-A-G | 11081033-A-G | ** | ||||||
13306485-C-A | 11150809-C-A | ** | ||||||
13331436-C-T | 11175760-C-T | ** | ||||||
13427114-G-C | 11271438-G-C | ** | ||||||
13445967-C-A | 11290291-C-A | ** | ||||||
13490595-C-T | 11334919-C-T | ** | ||||||
13507794-T-C | 11352118-T-C | ** | ||||||
13509648-C-A | 11353972-C-A | ** | ||||||
13566758-G-T | 11411082-G-T | ** | ||||||
13708981-A-G | 11553305-A-G | ** | ||||||
11646376-T-C | ** | |||||||
11648676-A-G | ** | |||||||
11668427-T-C | ** | |||||||
11675450-C-A | ** | |||||||
11677118-A-T | ** | |||||||
13878836-G-T | 11758130-G-T | ** | ||||||
13900157-C-G | 11779451-C-G | ** | ||||||
13920674-A-G | 11799968-A-G | ** | ||||||
13928822-A-T | 11808116-A-T | ** | ||||||
13928878-C-A | 11808172-C-A | ** | ||||||
13957601-C-A | 11836895-C-A | ** | ||||||
13966620-G-T | 11845914-G-T | ** | ||||||
13972918-A-T | 11852212-A-T | ** | ||||||
13981816-C-A | 11861110-C-A | ** | ||||||
13990126-A-C | 11869420-A-C | ** | ||||||
14065927-C-A | 11945221-C-A | ** | ||||||
14089110-A-G | 11968404-A-G | ** | ||||||
14230160-CA-C | 12109454-CA-C | ** | ||||||
14270649-C-A | 12149943-C-A | ** | ||||||
14283496-T-A | 12162790-T-A | ** | ||||||
14295643-C-A | 12174937-C-A | ** | ||||||
14355620-T-A | 12234915-T-A | ** | ||||||
14397821-G-A | 12277117-G-A | ** | ||||||
14422357-T-C | 12301632-T-C | FT168579 | ** | |||||
14456140-C-A | 12335413-C-A | ** | ||||||
14483686-C-A | 12362955-C-A | ** | ||||||
14552632-G-T | 12440833-G-T | ** | ||||||
14566660-C-A | 12454860-C-A | ** | ||||||
14598495-A-C | 12486695-A-C | ** | ||||||
14635403-C-A | 12523472-C-A | ** | ||||||
14784846-C-T | 12672916-C-T | ** | ||||||
14785521-C-A | 12673591-C-A | ** | ||||||
14846849-C-A | 12734915-C-A | ** | ||||||
15183847-G-C | 13071933-G-C | ** | ||||||
15193452-A-C | 13081538-A-C | ** | ||||||
15219006-A-T | 13107092-A-T | ** | ||||||
15376153-C-A | 13264273-C-A | ** | ||||||
15379961-C-A | 13268081-C-A | ** | ||||||
15424485-C-A | 13312605-C-A | ** | ||||||
15619236-A-T | 13507356-A-T | ** | ||||||
15650540-C-G | 13538660-C-G | ** | ||||||
15650582-T-A | 13538702-T-A | ** | ||||||
15655099-C-A | 13543219-C-A | ** | ||||||
15671312-C-G | 13559432-C-G | ** | ||||||
15696882-A-T | 13585002-A-T | ** | ||||||
15745580-GA-G | 13633700-GA-G | ** | ||||||
15758564-C-A | 13646684-C-A | ** | ||||||
15789607-C-A | 13677727-C-A | ** | ||||||
15918452-C-A | 13806572-C-A | ** | ||||||
16000047-C-A | 13888167-C-A | ** | ||||||
16004591-C-A | 13892711-C-A | ** | ||||||
16004669-G-T | 13892789-G-T | FGC35211 | ** | |||||
16055014-G-T | 13943134-G-T | ** | ||||||
16075210-C-A | 13963330-C-A | ** | ||||||
16090593-C-A | 13978713-C-A | ** | ||||||
16184257-C-A | 14072377-C-A | ** | ||||||
16241369-C-A | 14129489-C-A | ** | ||||||
16245686-A-G | 14133806-A-G | ** | ||||||
16355224-C-T | 14243344-C-T | ** | ||||||
16424459-T-A | 14312579-T-A | ** | ||||||
16520938-A-G | 14409058-A-G | ** | ||||||
16688077-C-T | 14576197-C-T | ** | ||||||
16702345-A-G | 14590465-A-G | ** | ||||||
16708298-A-G | 14596418-A-G | ** | ||||||
16709524-G-T | 14597644-G-T | ** | ||||||
16710110-G-A | 14598230-G-A | ** | ||||||
16828895-C-A | 14717015-C-A | ** | ||||||
16863752-C-A | 14751872-C-A | ** | ||||||
16876923-C-A | 14765043-C-A | ** | ||||||
17090784-T-A | 14978904-T-A | ** | ||||||
17203527-T-C | 15091647-T-C | ** | ||||||
17214123-G-A | 15102243-G-A | ** | ||||||
17306457-C-A | 15194577-C-A | ** | ||||||
17324380-A-T | 15212500-A-T | ** | ||||||
17372917-T-C | 15261037-T-C | ** | ||||||
17374078-A-T | 15262198-A-T | ** | ||||||
17376533-C-T | 15264653-C-T | FT425439 | ** | |||||
17426373-C-A | 15314493-C-A | FTB73791 | ** | |||||
17440901-C-A | 15329021-C-A | ** | ||||||
17497044-G-T | 15385164-G-T | ** | ||||||
17568321-G-A | 15456441-G-A | ** | ||||||
17648675-C-A | 15536795-C-A | ** | ||||||
17663107-C-A | 15551227-C-A | ** | ||||||
17685756-C-A | 15573876-C-A | ** | ||||||
17714816-T-C | 15602936-T-C | ** | ||||||
17735375-T-C | 15623495-T-C | ** | ||||||
17884354-G-T | 15772474-G-T | ** | ||||||
17886448-T-C | 15774568-T-C | ** | ||||||
17926635-T-A | 15814755-T-A | ** | ||||||
18056777-A-G | 15944897-A-G | ** | ||||||
18130639-A-T | 16018759-A-T | ** | ||||||
18191436-C-A | 16079556-C-A | ** | ||||||
18204983-T-C | 16093103-T-C | ** | ||||||
18369825-A-C | 16257945-A-C | P6_Prx | ** | |||||
18621591-C-A | 16509711-C-A | ** | ||||||
18650638-C-A | 16538758-C-A | ** | ||||||
18702000-T-G | 16590120-T-G | ** | ||||||
18955795-C-A | 16843915-C-A | ** | ||||||
19015182-C-A | 16903302-C-A | ** | ||||||
19045032-TG-T | 16933152-TG-T | ** | ||||||
19054348-T-C | 16942468-T-C | ** | ||||||
19097136-G-A | 16985256-G-A | ** | ||||||
19127676-A-G | 17015796-A-G | ** | ||||||
19202896-C-A | 17091016-C-A | ** | ||||||
19331510-G-T | 17219630-G-T | ** | ||||||
19393352-C-A | 17281472-C-A | ** | ||||||
20726890-G-T | 18565004-G-T | P4_Prx | ** | |||||
20726903-C-A | 18565017-C-A | P4_Prx | ** | |||||
21057553-G-T | 18895667-G-T | ** | ||||||
21084479-G-A | 18922593-G-A | ** | ||||||
21209092-G-T | 19047206-G-T | ** | ||||||
21381840-C-A | 19219954-C-A | ** | ||||||
21489052-T-G | 19327166-T-G | ** | ||||||
21502751-G-T | 19340865-G-T | ** | ||||||
21796487-T-G | 19634601-T-G | ** | ||||||
21863176-G-A | 19701290-G-A | ** | ||||||
21949968-G-A | 19788082-G-A | ** | ||||||
22052044-C-A | 19890158-C-A | ** | ||||||
22124352-G-T | 19962466-G-T | ** | ||||||
22164544-TCTC-T | 20002658-TCTC-T | ** | ||||||
22172800-A-G | 20010914-A-G | ** | ||||||
22536592-A-G | 20374706-A-G | ** | ||||||
22591455-T-C | 20429569-T-C | ** | ||||||
22666982-C-A | 20505096-C-A | ** | ||||||
22767374-C-A | 20605488-C-A | FTA2186 | ** | |||||
22787249-C-G | 20625363-C-G | ** | ||||||
22954790-C-A | 20792904-C-A | ** | ||||||
23008148-C-A | 20846262-C-A | ** | ||||||
23008252-C-A | 20846366-C-A | ** | ||||||
23017079-T-A | 20855193-T-A | ** | ||||||
23091620-C-A | 20929734-C-A | ** | ||||||
23142221-AT-A | 20980335-AT-A | ** | ||||||
23197952-T-C | 21036066-T-C | ** | ||||||
23600289-C-A | 21438403-C-A | ** | ||||||
23779815-C-A | 21617929-C-A | ** | ||||||
23790202-C-A | 21628316-C-A | ** | ||||||
23790248-C-T | 21628362-C-T | ** | ||||||
23952392-T-C | 21806245-T-C | ** | ||||||
24359585-T-C | 22213438-T-C | ** | ||||||
24359587-CAAAAAAA-C | 22213440-CAAAAAAA-C | 13×A | ** | |||||
24359607-A-G | 22213460-A-G | ** | ||||||
24359611-G-A | 22213464-G-A | ** | ||||||
24359620-G-C | 22213473-G-C | ** | ||||||
24359621-G-A | 22213474-G-A | ** | ||||||
24359622-C-T | 22213475-C-T | ** | ||||||
24671213-G-T | 22525066-G-T | P3_b2 | ** | |||||
24880333-A-C | 22734186-A-C | g1 | ** | |||||
25511100-G-T | 23364953-G-T | P1_gr1 | ** | |||||
25952039-A-T | 23805892-A-T | P1_Y1 | ** | |||||
27714304-G-T | 25568157-G-T | P1_Y2 | ** | |||||
27966935-G-T | 25820788-G-T | P1_Y2 | ** | |||||
28480441-T-C | 26334294-T-C | ** | ||||||
28483586-C-T | 26337439-C-T | ** | ||||||
28510929-G-T | 26364782-G-T | ** | ||||||
28518895-C-A | 26372748-C-A | ** | ||||||
28586647-C-T | 26440500-C-T | ** | ||||||
28604705-G-T | 26458558-G-T | ** | ||||||
28608458-A-G | 26462311-A-G | ** | ||||||
28609569-T-G | 26463422-T-G | ** | ||||||
28614222-T-C | 26468075-T-C | ** | ||||||
28623352-G-A | 26477205-G-A | ** | ||||||
28655225-C-A | 26509078-C-A | ** | ||||||
28692052-GA-G | 26545905-GA-G | 9×A | ** | |||||
28727698-C-G | 26581551-C-G | ** | ||||||
28727828-C-A | 26581681-C-A | ** | ||||||
28771477-C-A | 26625330-C-A | ** | ||||||
28815132-T-G | 26668985-T-G | ** | ||||||
56823329-C-T | ** | |||||||
56850080-A-G | ** | |||||||
56879862-C-T | ** | |||||||
17292636-C-CT | 15180756-C-CT | 10×T | *** | |||||
15828703-CAA-C | 13716823-CAA-C | 12×A | *** | |||||
7307244-GT-G | 7439203-GT-G | 11×T | *** | |||||
8631408-TTG-T | 8763367-TTG-T | *** | ||||||
14184727-CAAA-C | 12064021-CAAA-C | 14×A | *** | |||||
15685224-G-T | 13573344-G-T | *** | ||||||
7626171-C-A | 7758130-C-A | *** | ||||||
10808595-C-T | *** | |||||||
10679159-C-A | *** | |||||||
10979355-T-A | *** | |||||||
14470686-C-A | 12349955-C-A | Y91518 | *** | |||||
9069954-G-T | 9232345-G-T | *** | ||||||
22881076-CT-C,CTT | 20719190-CT-C,CTT | 14×T | *** | |||||
56830288-C-T | *** | |||||||
23488827-T-A | 21326941-T-A | *** | ||||||
7705035-C-A | 7836994-C-A | *** | ||||||
6644597-CTTTT-C | 6776556-CTTTT-C | 15×T | *** | |||||
10898332-C-A | *** | |||||||
11008436-C-A | *** | |||||||
2763773-CAAA-C,CAAAA | 2895732-CAAA-C,CAAAA | 20×A | *** | |||||
4521771-G-A | 4653730-G-A | *** | ||||||
6867838-C-T | 6999797-C-T | *** | ||||||
9221693-A-ATATATATATATG | 9384084-A-ATATATATATATG | *** | ||||||
10672694-C-A | *** | |||||||
10795719-C-A | FTA17254 | *** | ||||||
10879300-T-C | *** | |||||||
10889876-AT-A | *** | |||||||
10987188-A-T | *** | |||||||
10988573-TCCATTCCACT-T,TCAACTCCACAG | *** | |||||||
11020093-TACCTC-CTCCTC,T | *** | |||||||
13489629-CCACCCA-C,CAAACA | 11333953-CCACCCA-C,CAAACA | *** | ||||||
14716634-C-A | 12604702-C-A | *** | ||||||
15163300-ATT-A,AT | 13051386-ATT-A,AT | 15×T | *** | |||||
16428434-A-G | 14316554-A-G | *** | ||||||
16505481-C-A | 14393601-C-A | *** | ||||||
16701631-G-A | 14589751-G-A | *** | ||||||
17375791-T-C | 15263911-T-C | *** | ||||||
17375796-C-A | 15263916-C-A | *** | ||||||
22538374-A-G | 20376488-A-G | *** | ||||||
23126852-TA-T | 20964966-TA-T | *** | ||||||
56847528-A-G | *** | |||||||
56850587-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.