Smithhart
BigY2: 563428MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 563428 |
---|---|---|---|---|---|---|---|
hg19:Y:6328353-G-A hg38:Y:6460312-G-A | IR3_Dst | A* | |||||
hg19:Y:19619019-G-A hg38:Y:17507139-G-A | P5_Prx | Y | A* | ||||
hg19:Y:22305477-C-G hg38:Y:20143591-C-G | DYZ19 | A* | |||||
hg19:Y:19332063-ATTTTG-A hg38:Y:17220183-ATTTTG-A | 9×TTTTG | + | |||||
hg19:Y:22464538-T-A hg38:Y:20302652-T-A | Z15318 | DYZ19 | + | ||||
hg19:Y:6104276-A-G hg38:Y:6236235-A-G | BY59072 | + | |||||
hg19:Y:9841525-A-C hg38:Y:10003916-A-C | BY81354 | Y | Y | + | |||
hg19:Y:13479904-C-T hg38:Y:11324228-C-T | BY86046 | + | |||||
hg19:Y:13646778-G-A hg38:Y:11491102-G-A | BY86909 | DYZ17 | + | ||||
hg19:Y:13692675-G-T hg38:Y:11536999-G-T | BY88739 | DYZ17 | + | ||||
hg19:Y:14410902-C-T hg38:Y:12290199-C-T | BY95574 | Y | Y | + | |||
hg19:Y:17510828-G-A hg38:Y:15398948-G-A | BY115348 | Y | Y | + | |||
hg19:Y:22107670-T-A hg38:Y:19945784-T-A | BY137678 | Y | Y | + | |||
hg19:Y:22466465-C-T hg38:Y:20304579-C-T | BY47348 | DYZ19 | + | ||||
hg19:Y:22859186-G-A hg38:Y:20697300-G-A | BY141275 | Y | Y | + | |||
hg19:Y:23119864-C-T hg38:Y:20957978-C-T | BY143100 | Y | Y | + | |||
hg19:Y:13684819-A-T hg38:Y:11529143-A-T | DYZ17 | * | |||||
hg19:Y:13684821-G-T hg38:Y:11529145-G-T | DYZ17 | * | |||||
hg19:Y:14027913-T-TG hg38:Y:11907207-T-TG | * | ||||||
hg19:Y:22275159-G-C hg38:Y:20113273-G-C | DYZ19 | * | |||||
hg19:Y:22316023-G-T hg38:Y:20154137-G-T | DYZ19 | * | |||||
hg19:Y:21318477-C-A hg38:Y:19156591-C-A | 19×A | ** | |||||
hg19:Y:8568450-G-T hg38:Y:8700409-G-T | ** | ||||||
hg19:Y:22868312-AC-A hg38:Y:20706426-AC-A | ** | ||||||
hg19:Y:13468583-G-A hg38:Y:11312907-G-A | ** | ||||||
hg19:Y:2903359-TTC-T hg38:Y:3035318-TTC-T | ** | ||||||
hg19:Y:7381816-T-A hg38:Y:7513775-T-A | ** | ||||||
hg19:Y:15347080-C-A hg38:Y:13235199-C-A | ** | ||||||
hg19:Y:16250624-G-T hg38:Y:14138744-G-T | BY1237 Y199 | 28×T | ** | ||||
hg19:Y:3332233-TA-T hg38:Y:3464192-TA-T | 10×A | ** | |||||
hg19:Y:13486615-T-A hg38:Y:11330939-T-A | ** | ||||||
hg19:Y:13486598-G-A hg38:Y:11330922-G-A | ** | ||||||
hg38:Y:10945084-A-T | ** | ||||||
hg38:Y:10761159-A-T | ** | ||||||
hg38:Y:10761165-C-A | ** | ||||||
hg38:Y:10761183-C-T | ** | ||||||
hg19:Y:8730898-C-A hg38:Y:8862857-C-A | ** | ||||||
hg38:Y:10685532-A-T | ** | ||||||
hg19:Y:9516914-A-AT hg38:Y:9679305-A-AT | 10×T | ** | |||||
hg19:Y:28728219-C-A hg38:Y:26582072-C-A | ** | ||||||
hg38:Y:10877811-T-G | ** | ||||||
hg38:Y:11677357-G-GTATCA | DYZ17 | ** | |||||
hg38:Y:11677365-TG-T | DYZ17 | ** | |||||
hg38:Y:11677369-A-C | DYZ17 | ** | |||||
hg19:Y:9735605-GT-G hg38:Y:9897996-GT-G | IR3_Prx | 30×T | ** | ||||
hg38:Y:10657242-C-T | ** | ||||||
hg19:Y:5852578-C-A hg38:Y:5984537-C-A | ** | ||||||
hg38:Y:10930053-C-A | ** | ||||||
hg19:Y:13884174-C-A hg38:Y:11763468-C-A | ** | ||||||
hg38:Y:11011287-A-G | ** | ||||||
hg19:Y:15320553-G-A hg38:Y:13208659-G-A | FTB10900 | ** | |||||
hg38:Y:10898865-A-C | ** | ||||||
hg38:Y:10800777-C-A | ** | ||||||
hg19:Y:13485574-A-T hg38:Y:11329898-A-T | ** | ||||||
hg19:Y:5761291-TA-T hg38:Y:5893250-TA-T | 8×A | ** | |||||
hg19:Y:23476053-C-A hg38:Y:21314167-C-A | ** | ||||||
hg19:Y:13712635-A-C hg38:Y:11556959-A-C | DYZ17 | ** | |||||
hg19:Y:27447462-G-GTT hg38:Y:25301315-G-GTT | P1_Y2 | ** | |||||
hg19:Y:3628378-CGT-C hg38:Y:3760337-CGT-C | 9×GT | ** | |||||
hg38:Y:10691024-C-G | ** | ||||||
hg38:Y:10937854-C-A | ** | ||||||
hg38:Y:10840054-C-T | ** | ||||||
hg38:Y:10930001-T-C | ** | ||||||
hg19:Y:24283373-G-T hg38:Y:22137226-G-T | P3_t1 | ** | |||||
hg19:Y:15743698-C-A hg38:Y:13631818-C-A | ** | ||||||
hg19:Y:18263856-CAAAA-C hg38:Y:16151976-CAAAA-C | 26×A | ** | |||||
hg19:Y:13468577-C-G hg38:Y:11312901-C-G | ** | ||||||
hg19:Y:7461779-G-T hg38:Y:7593738-G-T | IR1_L | ** | |||||
hg38:Y:10969951-T-G | ** | ||||||
hg19:Y:27699979-G-T hg38:Y:25553832-G-T | P1_Y2 | ** | |||||
hg38:Y:10938389-A-C | ** | ||||||
hg19:Y:13468600-C-G hg38:Y:11312924-C-G | ** | ||||||
hg19:Y:13468605-A-G hg38:Y:11312929-A-G | ** | ||||||
hg38:Y:10663628-G-A | ** | ||||||
hg38:Y:10808662-A-T | ** | ||||||
hg19:Y:8792830-TTTCC-T hg38:Y:8924789-TTTCC-T | 6×TTCC | ** | |||||
hg19:Y:14255088-C-A hg38:Y:12134382-C-A | ** | ||||||
hg19:Y:15940304-C-A hg38:Y:13828424-C-A | ** | ||||||
hg19:Y:4178995-C-A hg38:Y:4310954-C-A | ** | ||||||
hg38:Y:10870248-G-T | ** | ||||||
hg38:Y:10825192-T-G | ** | ||||||
hg38:Y:10825206-AC-T | ** | ||||||
hg19:Y:13803228-C-A hg38:Y:11682522-C-A | DYZ17 | ** | |||||
hg38:Y:10866291-C-A | ** | ||||||
hg38:Y:10687289-A-T | ** | ||||||
hg38:Y:11022983-A-T | ** | ||||||
hg38:Y:10962645-C-A | ** | ||||||
hg19:Y:8105396-C-CA hg38:Y:8237355-C-CA | 10×A | ** | |||||
hg38:Y:10630618-CC-A | ** | ||||||
hg19:Y:8075991-C-A hg38:Y:8207950-C-A | ** | ||||||
hg38:Y:10785783-G-T | ** | ||||||
hg38:Y:10785785-C-T | ** | ||||||
hg38:Y:10977100-C-A | ** | ||||||
hg19:Y:23126758-C-A hg38:Y:20964872-C-A | ** | ||||||
hg38:Y:10935307-C-A | ** | ||||||
hg19:Y:7228491-C-A hg38:Y:7360450-C-A | ** | ||||||
hg19:Y:21135086-G-C hg38:Y:18973200-G-C | ** | ||||||
hg19:Y:21135096-ATT-A hg38:Y:18973210-ATT-A | 8×T | ** | |||||
hg19:Y:24254146-AC-A hg38:Y:22107999-AC-A | P3_b1 | ** | |||||
hg19:Y:23471058-G-A hg38:Y:21309172-G-A | ** | ||||||
hg19:Y:9440271-C-A hg38:Y:9602662-C-A | ** | ||||||
hg38:Y:10817307-C-A | ** | ||||||
hg19:Y:4179012-G-T hg38:Y:4310971-G-T | ** | ||||||
hg19:Y:14887841-C-A hg38:Y:12775907-C-A | ** | ||||||
hg19:Y:18631801-C-A hg38:Y:16519921-C-A | ** | ||||||
hg19:Y:26228636-C-A hg38:Y:24082489-C-A | P1_Y1 | ** | |||||
hg38:Y:11014090-C-A | ** | ||||||
hg38:Y:10992681-T-C | ** | ||||||
hg19:Y:22300826-G-T hg38:Y:20138940-G-T | DYZ19 | ** | |||||
hg19:Y:19727393-T-A hg38:Y:17615513-T-A | P5_Prx | ** | |||||
hg38:Y:10841816-C-A | ** | ||||||
hg19:Y:8711335-C-A hg38:Y:8843294-C-A | ** | ||||||
hg19:Y:18086241-C-A hg38:Y:15974361-C-A | ** | ||||||
hg38:Y:10895763-T-G | ** | ||||||
hg19:Y:20774944-A-T hg38:Y:18613058-A-T | P4_Prx | ** | |||||
hg19:Y:7767658-A-AT hg38:Y:7899617-A-AT | 8×T | ** | |||||
hg38:Y:10624884-T-A | ** | ||||||
hg19:Y:13928026-C-A hg38:Y:11807320-C-A | ** | ||||||
hg19:Y:22649582-C-A hg38:Y:20487696-C-A | ** | ||||||
hg19:Y:14808474-C-A hg38:Y:12696545-C-A | ** | ||||||
hg19:Y:21346293-C-A hg38:Y:19184407-C-A | ** | ||||||
hg19:Y:2767714-C-A hg38:Y:2899673-C-A | ** | ||||||
hg19:Y:16988407-C-A hg38:Y:14876527-C-A | ** | ||||||
hg19:Y:13254622-A-C hg38:Y:11098946-A-C | ** | ||||||
hg19:Y:14702128-C-A hg38:Y:12590194-C-A | ** | ||||||
hg19:Y:2873838-C-A hg38:Y:3005797-C-A | ** | ||||||
hg38:Y:10942131-C-A | ** | ||||||
hg19:Y:22970274-C-A hg38:Y:20808388-C-A | ** | ||||||
hg38:Y:9056439-C-A | ** | ||||||
hg19:Y:14753223-C-A hg38:Y:12641292-C-A | ** | ||||||
hg19:Y:14049926-C-A hg38:Y:11929220-C-A | ** | ||||||
hg19:Y:15366927-C-A hg38:Y:13255047-C-A | ** | ||||||
hg19:Y:8078642-G-T hg38:Y:8210601-G-T | ** | ||||||
hg19:Y:21072235-C-A hg38:Y:18910349-C-A | ** | ||||||
hg19:Y:7087877-T-C hg38:Y:7219836-T-C | ** | ||||||
hg19:Y:15735702-C-A hg38:Y:13623822-C-A | ** | ||||||
hg19:Y:19479973-C-A hg38:Y:17368093-C-A | ** | ||||||
hg19:Y:7052978-C-A hg38:Y:7184937-C-A | ** | ||||||
hg19:Y:21505554-C-A hg38:Y:19343668-C-A | ** | ||||||
hg19:Y:14384355-G-T hg38:Y:12263651-G-T | ** | ||||||
hg19:Y:15777073-C-A hg38:Y:13665193-C-A | ** | ||||||
hg19:Y:28478988-C-A hg38:Y:26332841-C-A | ** | ||||||
hg19:Y:18381705-C-A hg38:Y:16269825-C-A | P6_Gap | ** | |||||
hg19:Y:16943408-TTA-T hg38:Y:14831528-TTA-T | ** | ||||||
hg19:Y:19496123-C-A hg38:Y:17384243-C-A | ** | ||||||
hg38:Y:56841871-C-A | ** | ||||||
hg19:Y:21183622-C-A hg38:Y:19021736-C-A | ** | ||||||
hg38:Y:10940860-C-A | ** | ||||||
hg38:Y:10801938-T-G | ** | ||||||
hg19:Y:8878799-G-T hg38:Y:9010758-G-T | ** | ||||||
hg19:Y:4703231-C-A hg38:Y:4835190-C-A | ** | ||||||
hg19:Y:8762017-C-A hg38:Y:8893976-C-A | ** | ||||||
hg19:Y:15941403-C-A hg38:Y:13829523-C-A | ** | ||||||
hg19:Y:20842639-C-A hg38:Y:18680753-C-A | P4_Dst | ** | |||||
hg38:Y:10663631-C-A | ** | ||||||
hg19:Y:16186527-A-C hg38:Y:14074647-A-C | ** | ||||||
hg38:Y:10682741-C-A | ** | ||||||
hg19:Y:18195152-C-A hg38:Y:16083272-C-A | ** | ||||||
hg19:Y:18130461-C-A hg38:Y:16018581-C-A | ** | ||||||
hg19:Y:13698815-A-C hg38:Y:11543139-A-C | DYZ17 | ** | |||||
hg19:Y:17718484-T-C hg38:Y:15606604-T-C | ** | ||||||
hg19:Y:14607829-C-A hg38:Y:12496031-C-A | ** | ||||||
hg19:Y:21334564-C-A hg38:Y:19172678-C-A | ** | ||||||
hg19:Y:23066889-C-A hg38:Y:20905003-C-A | ** | ||||||
hg38:Y:10847471-T-C | ** | ||||||
hg19:Y:10057280-C-A hg38:Y:10219671-C-A | ** | ||||||
hg19:Y:2672166-G-T hg38:Y:2804125-G-T | ** | ||||||
hg19:Y:2680132-C-T hg38:Y:2812091-C-T | ** | ||||||
hg19:Y:2834248-C-A hg38:Y:2966207-C-A | ** | ||||||
hg19:Y:2873931-A-C hg38:Y:3005890-A-C | ** | ||||||
hg19:Y:2981332-A-G hg38:Y:3113291-A-G | ** | ||||||
hg19:Y:2991480-A-G hg38:Y:3123439-A-G | ** | ||||||
hg19:Y:2991593-C-A hg38:Y:3123552-C-A | ** | ||||||
hg19:Y:3218529-T-G hg38:Y:3350488-T-G | ** | ||||||
hg19:Y:3296399-C-A hg38:Y:3428358-C-A | ** | ||||||
hg19:Y:3436253-C-A hg38:Y:3568212-C-A | ** | ||||||
hg19:Y:3656235-C-A hg38:Y:3788194-C-A | ** | ||||||
hg19:Y:3734724-C-A hg38:Y:3866683-C-A | ** | ||||||
hg19:Y:3763516-C-A hg38:Y:3895475-C-A | ** | ||||||
hg19:Y:3936454-G-T hg38:Y:4068413-G-T | ** | ||||||
hg19:Y:3975718-G-T hg38:Y:4107677-G-T | ** | ||||||
hg19:Y:4100864-C-A hg38:Y:4232823-C-A | ** | ||||||
hg19:Y:4135889-C-A hg38:Y:4267848-C-A | ** | ||||||
hg19:Y:4321901-G-T hg38:Y:4453860-G-T | ** | ||||||
hg19:Y:4609933-C-A hg38:Y:4741892-C-A | ** | ||||||
hg19:Y:4672607-G-T hg38:Y:4804566-G-T | ** | ||||||
hg19:Y:4899592-G-T hg38:Y:5031551-G-T | ** | ||||||
hg19:Y:4946349-G-T hg38:Y:5078308-G-T | ** | ||||||
hg19:Y:5091595-C-A hg38:Y:5223554-C-A | ** | ||||||
hg19:Y:5125917-C-A hg38:Y:5257876-C-A | ** | ||||||
hg19:Y:5146484-C-A hg38:Y:5278443-C-A | ** | ||||||
hg19:Y:5194674-G-T hg38:Y:5326633-G-T | ** | ||||||
hg19:Y:5323196-C-A hg38:Y:5455155-C-A | ** | ||||||
hg19:Y:5409367-G-T hg38:Y:5541326-G-T | ** | ||||||
hg19:Y:5644705-A-G hg38:Y:5776664-A-G | ** | ||||||
hg19:Y:5698872-G-T hg38:Y:5830831-G-T | ** | ||||||
hg19:Y:5698877-T-G hg38:Y:5830836-T-G | ** | ||||||
hg19:Y:5758365-G-T hg38:Y:5890324-G-T | ** | ||||||
hg19:Y:5775393-C-A hg38:Y:5907352-C-A | ** | ||||||
hg19:Y:5852640-A-C hg38:Y:5984599-A-C | ** | ||||||
hg19:Y:6080638-TTCTC-T hg38:Y:6212597-TTCTC-T | 9×TC | ** | |||||
hg19:Y:6120197-T-C hg38:Y:6252156-T-C | ** | ||||||
hg19:Y:6144676-A-G hg38:Y:6276635-A-G | IR3_Dst | ** | |||||
hg19:Y:6287042-G-T hg38:Y:6419001-G-T | IR3_Dst | ** | |||||
hg19:Y:6455415-G-T hg38:Y:6587374-G-T | ** | ||||||
hg19:Y:6582415-C-G hg38:Y:6714374-C-G | ** | ||||||
hg19:Y:6713365-G-T hg38:Y:6845324-G-T | ** | ||||||
hg19:Y:6887539-C-A hg38:Y:7019498-C-A | ** | ||||||
hg19:Y:7008754-C-A hg38:Y:7140713-C-A | ** | ||||||
hg19:Y:7087896-C-T hg38:Y:7219855-C-T | ** | ||||||
hg19:Y:7101481-C-A hg38:Y:7233440-C-A | ** | ||||||
hg19:Y:7108331-T-G hg38:Y:7240290-T-G | ** | ||||||
hg19:Y:7123691-C-A hg38:Y:7255650-C-A | ** | ||||||
hg19:Y:7138822-C-A hg38:Y:7270781-C-A | ** | ||||||
hg19:Y:7153886-C-A hg38:Y:7285845-C-A | ** | ||||||
hg19:Y:7195293-G-T hg38:Y:7327252-G-T | ** | ||||||
hg19:Y:7218279-G-T hg38:Y:7350238-G-T | ** | ||||||
hg19:Y:7221286-C-A hg38:Y:7353245-C-A | ** | ||||||
hg19:Y:7247524-C-A hg38:Y:7379483-C-A | ** | ||||||
hg19:Y:7311661-C-A hg38:Y:7443620-C-A | ** | ||||||
hg19:Y:7322529-C-A hg38:Y:7454488-C-A | ** | ||||||
hg19:Y:7333122-C-A hg38:Y:7465081-C-A | FT121338 | ** | |||||
hg19:Y:7340859-G-T hg38:Y:7472818-G-T | ** | ||||||
hg19:Y:7355943-C-A hg38:Y:7487902-C-A | ** | ||||||
hg19:Y:7359329-T-G hg38:Y:7491288-T-G | ** | ||||||
hg19:Y:7363242-T-A hg38:Y:7495201-T-A | ** | ||||||
hg19:Y:7371751-C-A hg38:Y:7503710-C-A | Y84015 | ** | |||||
hg19:Y:7381806-T-C hg38:Y:7513765-T-C | ** | ||||||
hg19:Y:7381828-G-C hg38:Y:7513787-G-C | ** | ||||||
hg19:Y:7412857-C-A hg38:Y:7544816-C-A | FTB35406 | ** | |||||
hg19:Y:7646519-G-T hg38:Y:7778478-G-T | ** | ||||||
hg19:Y:7649243-C-A hg38:Y:7781202-C-A | ** | ||||||
hg19:Y:7706290-C-A hg38:Y:7838249-C-A | ** | ||||||
hg19:Y:7717874-C-A hg38:Y:7849833-C-A | ** | ||||||
hg19:Y:8070047-C-A hg38:Y:8202006-C-A | ** | ||||||
hg19:Y:8072877-G-A hg38:Y:8204836-G-A | FT89090 | ** | |||||
hg19:Y:8163840-C-A hg38:Y:8295799-C-A | ** | ||||||
hg19:Y:8166635-T-C hg38:Y:8298594-T-C | ** | ||||||
hg19:Y:8282302-C-A hg38:Y:8414261-C-A | ** | ||||||
hg19:Y:8753853-G-T hg38:Y:8885812-G-T | ** | ||||||
hg19:Y:8855189-C-A hg38:Y:8987148-C-A | ** | ||||||
hg38:Y:9119736-G-C | ** | ||||||
hg38:Y:9123406-G-T | ** | ||||||
hg19:Y:8987677-C-A hg38:Y:9150068-C-A | ** | ||||||
hg19:Y:9355918-C-A hg38:Y:9518309-C-A | ** | ||||||
hg19:Y:9592988-TTTTTTTGTTTGTG-T hg38:Y:9755379-TTTTTTTGTTTGTG-T | IR3_Prx | ** | |||||
hg19:Y:9742539-G-T hg38:Y:9904930-G-T | IR3_Prx | ** | |||||
hg19:Y:9774405-C-A hg38:Y:9936796-C-A | ** | ||||||
hg19:Y:9847434-A-G hg38:Y:10009825-A-G | ** | ||||||
hg19:Y:9859191-TC-T hg38:Y:10021582-TC-T | ** | ||||||
hg19:Y:9871621-C-A hg38:Y:10034012-C-A | ** | ||||||
hg19:Y:9937018-C-A hg38:Y:10099409-C-A | ** | ||||||
hg19:Y:9979069-T-A hg38:Y:10141460-T-A | ** | ||||||
hg19:Y:10067503-G-A hg38:Y:10229894-G-A | ** | ||||||
hg19:Y:10070069-T-A hg38:Y:10232460-T-A | ** | ||||||
hg38:Y:10654598-C-A | ** | ||||||
hg38:Y:10654823-C-A | ** | ||||||
hg38:Y:10671017-A-ATTTT | ** | ||||||
hg38:Y:10773984-C-A | ** | ||||||
hg38:Y:10783126-C-A | ** | ||||||
hg38:Y:10800250-T-G | ** | ||||||
hg38:Y:10800264-G-A | ** | ||||||
hg38:Y:10801874-T-A | ** | ||||||
hg38:Y:10807945-C-A | ** | ||||||
hg38:Y:10817403-C-A | ** | ||||||
hg38:Y:10827432-C-T | FT432981 | ** | |||||
hg38:Y:10840391-A-G | ** | ||||||
hg38:Y:10840756-C-A | ** | ||||||
hg38:Y:10840874-C-A | ** | ||||||
hg38:Y:10841326-C-A | ** | ||||||
hg38:Y:10847454-C-T | ** | ||||||
hg38:Y:10847464-T-C | ** | ||||||
hg38:Y:10847466-C-G | ** | ||||||
hg38:Y:10847474-C-T | ** | ||||||
hg38:Y:10849716-T-G | ** | ||||||
hg38:Y:10857797-C-A | ** | ||||||
hg38:Y:10870189-C-A | ** | ||||||
hg38:Y:10880725-T-A | ** | ||||||
hg38:Y:10906812-G-T | ** | ||||||
hg38:Y:10925244-G-A | ** | ||||||
hg38:Y:10929984-C-CGTTTCATTCTGTACT | ** | ||||||
hg38:Y:10930011-C-TGCCAG | ** | ||||||
hg38:Y:10930059-C-T | ** | ||||||
hg38:Y:10937594-C-A | ** | ||||||
hg38:Y:10949125-C-A | ** | ||||||
hg38:Y:10954130-A-G | ** | ||||||
hg38:Y:10955401-C-T | ** | ||||||
hg38:Y:10964040-T-C | ** | ||||||
hg38:Y:10980350-C-G | ** | ||||||
hg38:Y:11011008-C-A | ** | ||||||
hg38:Y:11022963-AT-A | ** | ||||||
hg38:Y:11031250-C-A | ** | ||||||
hg19:Y:13214399-C-A hg38:Y:11058723-C-A | ** | ||||||
hg19:Y:13447181-G-T hg38:Y:11291505-G-T | ** | ||||||
hg19:Y:13454403-A-T hg38:Y:11298727-A-T | ** | ||||||
hg19:Y:13592543-C-A hg38:Y:11436867-C-A | ** | ||||||
hg38:Y:11646633-G-T | DYZ17 | ** | |||||
hg38:Y:11651476-G-T | DYZ17 | ** | |||||
hg19:Y:13801391-G-T hg38:Y:11680685-G-T | DYZ17 | ** | |||||
hg19:Y:13947649-C-A hg38:Y:11826943-C-A | ** | ||||||
hg19:Y:14142431-C-A hg38:Y:12021725-C-A | ** | ||||||
hg19:Y:14272583-C-A hg38:Y:12151877-C-A | ** | ||||||
hg19:Y:14330747-C-A hg38:Y:12210041-C-A | ** | ||||||
hg19:Y:14408632-C-A hg38:Y:12287930-C-A | ** | ||||||
hg19:Y:14452185-C-A hg38:Y:12331458-C-A | ** | ||||||
hg19:Y:14490881-C-A hg38:Y:12370150-C-A | ** | ||||||
hg38:Y:12374988-C-T | ** | ||||||
hg19:Y:14512426-G-A hg38:Y:12400631-G-A | ** | ||||||
hg19:Y:14516775-C-A hg38:Y:12404976-C-A | ** | ||||||
hg19:Y:14553042-C-A hg38:Y:12441243-C-A | ** | ||||||
hg19:Y:14564845-T-G hg38:Y:12453045-T-G | ** | ||||||
hg19:Y:14586783-C-A hg38:Y:12474983-C-A | ** | ||||||
hg19:Y:14681777-C-A hg38:Y:12569843-C-A | ** | ||||||
hg19:Y:14689070-C-A hg38:Y:12577136-C-A | ** | ||||||
hg19:Y:14724584-C-A hg38:Y:12612652-C-A | ** | ||||||
hg19:Y:14811009-G-A hg38:Y:12699080-G-A | ** | ||||||
hg19:Y:14826567-T-TA hg38:Y:12714634-T-TA | ** | ||||||
hg19:Y:14837008-AT-A hg38:Y:12725075-AT-A | 8×T | ** | |||||
hg19:Y:14900800-C-A hg38:Y:12788867-C-A | ** | ||||||
hg19:Y:15321494-C-A hg38:Y:13209612-C-A | ** | ||||||
hg19:Y:15376980-G-T hg38:Y:13265100-G-T | ** | ||||||
hg19:Y:15391189-C-A hg38:Y:13279309-C-A | ** | ||||||
hg19:Y:15584661-C-A hg38:Y:13472781-C-A | ** | ||||||
hg19:Y:15680078-A-C hg38:Y:13568198-A-C | ** | ||||||
hg19:Y:15701178-G-T hg38:Y:13589298-G-T | ** | ||||||
hg19:Y:15823198-G-C hg38:Y:13711318-G-C | ** | ||||||
hg19:Y:15880073-TTATAAGA-T hg38:Y:13768193-TTATAAGA-T | ** | ||||||
hg19:Y:15901234-C-A hg38:Y:13789354-C-A | ** | ||||||
hg19:Y:15901493-C-A hg38:Y:13789613-C-A | ** | ||||||
hg19:Y:15926739-T-G hg38:Y:13814859-T-G | ** | ||||||
hg19:Y:15926789-T-G hg38:Y:13814909-T-G | ** | ||||||
hg19:Y:16012469-G-T hg38:Y:13900589-G-T | ** | ||||||
hg19:Y:16232420-C-A hg38:Y:14120540-C-A | ** | ||||||
hg19:Y:16434627-C-A hg38:Y:14322747-C-A | ** | ||||||
hg19:Y:16445955-C-A hg38:Y:14334075-C-A | ** | ||||||
hg19:Y:16489838-T-C hg38:Y:14377958-T-C | FT96700 | ** | |||||
hg19:Y:16577733-C-A hg38:Y:14465853-C-A | ** | ||||||
hg19:Y:16603412-C-A hg38:Y:14491532-C-A | ** | ||||||
hg19:Y:16603437-T-C hg38:Y:14491557-T-C | ** | ||||||
hg19:Y:16625063-A-C hg38:Y:14513183-A-C | ** | ||||||
hg19:Y:16631649-C-A hg38:Y:14519769-C-A | ** | ||||||
hg19:Y:16686068-C-A hg38:Y:14574188-C-A | ** | ||||||
hg19:Y:16867549-C-A hg38:Y:14755669-C-A | ** | ||||||
hg19:Y:16943388-C-A hg38:Y:14831508-C-A | ** | ||||||
hg19:Y:16962818-G-A hg38:Y:14850938-G-A | ** | ||||||
hg19:Y:17033851-C-A hg38:Y:14921971-C-A | ** | ||||||
hg19:Y:17039118-C-A hg38:Y:14927238-C-A | ** | ||||||
hg19:Y:17177206-G-T hg38:Y:15065326-G-T | ** | ||||||
hg19:Y:17301258-AAAAG-A hg38:Y:15189378-AAAAG-A | ** | ||||||
hg19:Y:17353651-G-A hg38:Y:15241771-G-A | ** | ||||||
hg19:Y:17353682-A-C hg38:Y:15241802-A-C | ** | ||||||
hg19:Y:17353683-G-A hg38:Y:15241803-G-A | ** | ||||||
hg19:Y:17372063-C-A hg38:Y:15260183-C-A | ** | ||||||
hg19:Y:17397248-A-C hg38:Y:15285368-A-C | ** | ||||||
hg19:Y:17397253-A-ATT hg38:Y:15285373-A-ATT | 16×T | ** | |||||
hg19:Y:17498854-G-T hg38:Y:15386974-G-T | ** | ||||||
hg19:Y:17504349-C-A hg38:Y:15392469-C-A | ** | ||||||
hg19:Y:17538394-T-A hg38:Y:15426514-T-A | ** | ||||||
hg19:Y:17622716-C-A hg38:Y:15510836-C-A | ** | ||||||
hg19:Y:17869551-C-A hg38:Y:15757671-C-A | ** | ||||||
hg19:Y:17943996-C-A hg38:Y:15832116-C-A | ** | ||||||
hg19:Y:17947004-C-T hg38:Y:15835124-C-T | ** | ||||||
hg19:Y:17978486-C-A hg38:Y:15866606-C-A | ** | ||||||
hg19:Y:17994847-G-T hg38:Y:15882967-G-T | P7_Prx | ** | |||||
hg19:Y:18020402-T-G hg38:Y:15908522-T-G | ** | ||||||
hg19:Y:18139593-G-C hg38:Y:16027713-G-C | ** | ||||||
hg19:Y:18147633-C-A hg38:Y:16035753-C-A | ** | ||||||
hg19:Y:18385187-A-G hg38:Y:16273307-A-G | P6_Gap | ** | |||||
hg19:Y:18389306-A-C hg38:Y:16277426-A-C | P6_Gap | ** | |||||
hg19:Y:18397428-C-A hg38:Y:16285548-C-A | P6_Gap | ** | |||||
hg19:Y:18704207-G-A hg38:Y:16592327-G-A | ** | ||||||
hg19:Y:18736175-C-A hg38:Y:16624295-C-A | ** | ||||||
hg19:Y:18892053-C-A hg38:Y:16780173-C-A | ** | ||||||
hg19:Y:18948279-C-A hg38:Y:16836399-C-A | ** | ||||||
hg19:Y:18982547-CAAAAAAAAA-C hg38:Y:16870667-CAAAAAAAAA-C | 39×A | ** | |||||
hg19:Y:19075549-C-A hg38:Y:16963669-C-A | ** | ||||||
hg19:Y:19146691-C-T hg38:Y:17034811-C-T | ** | ||||||
hg19:Y:19322437-C-A hg38:Y:17210557-C-A | ** | ||||||
hg19:Y:19340600-C-A hg38:Y:17228720-C-A | ** | ||||||
hg19:Y:19378025-A-G hg38:Y:17266145-A-G | ** | ||||||
hg19:Y:19389564-C-A hg38:Y:17277684-C-A | ** | ||||||
hg19:Y:19477486-G-T hg38:Y:17365606-G-T | ** | ||||||
hg19:Y:19509733-C-A hg38:Y:17397853-C-A | ** | ||||||
hg19:Y:19668717-G-T hg38:Y:17556837-G-T | P5_Prx | ** | |||||
hg19:Y:20084465-C-A hg38:Y:17972585-C-A | P5_Dst | ** | |||||
hg19:Y:21048168-C-A hg38:Y:18886282-C-A | ** | ||||||
hg19:Y:21135091-A-G hg38:Y:18973205-A-G | ** | ||||||
hg19:Y:21379388-G-T hg38:Y:19217502-G-T | ** | ||||||
hg19:Y:21394211-C-A hg38:Y:19232325-C-A | ** | ||||||
hg19:Y:21437529-T-C hg38:Y:19275643-T-C | ** | ||||||
hg19:Y:21534619-A-G hg38:Y:19372733-A-G | ** | ||||||
hg19:Y:21672294-C-A hg38:Y:19510408-C-A | ** | ||||||
hg19:Y:21691054-C-A hg38:Y:19529168-C-A | ** | ||||||
hg19:Y:21713364-A-G hg38:Y:19551478-A-G | ** | ||||||
hg19:Y:21713407-C-T hg38:Y:19551521-C-T | ** | ||||||
hg19:Y:21713419-A-G hg38:Y:19551533-A-G | ** | ||||||
hg19:Y:21722221-C-A hg38:Y:19560335-C-A | ** | ||||||
hg19:Y:21951963-C-A hg38:Y:19790077-C-A | ** | ||||||
hg19:Y:21953171-C-A hg38:Y:19791285-C-A | ** | ||||||
hg19:Y:22058415-AGCAT-A hg38:Y:19896529-AGCAT-A | ** | ||||||
hg19:Y:22207280-G-A hg38:Y:20045394-G-A | ** | ||||||
hg19:Y:22300879-A-G hg38:Y:20138993-A-G | DYZ19 | ** | |||||
hg19:Y:22647488-A-T hg38:Y:20485602-A-T | ** | ||||||
hg19:Y:22706875-C-A hg38:Y:20544989-C-A | ** | ||||||
hg19:Y:22723403-A-T hg38:Y:20561517-A-T | ** | ||||||
hg19:Y:22775966-C-A hg38:Y:20614080-C-A | ** | ||||||
hg19:Y:22839725-C-A hg38:Y:20677839-C-A | ** | ||||||
hg19:Y:22886342-C-A hg38:Y:20724456-C-A | ** | ||||||
hg19:Y:22965197-C-A hg38:Y:20803311-C-A | ** | ||||||
hg19:Y:22998693-G-T hg38:Y:20836807-G-T | ** | ||||||
hg19:Y:23059560-G-T hg38:Y:20897674-G-T | ** | ||||||
hg19:Y:23204382-G-A hg38:Y:21042496-G-A | ** | ||||||
hg19:Y:23311025-C-A hg38:Y:21149139-C-A | ** | ||||||
hg19:Y:23435176-TTTGGG-T hg38:Y:21273290-TTTGGG-T | ** | ||||||
hg19:Y:23465514-G-T hg38:Y:21303628-G-T | ** | ||||||
hg19:Y:23475486-C-T hg38:Y:21313600-C-T | ** | ||||||
hg19:Y:23522667-C-A hg38:Y:21360781-C-A | ** | ||||||
hg19:Y:23625774-T-A hg38:Y:21463888-T-A | ** | ||||||
hg19:Y:23838015-G-T hg38:Y:21676129-G-T | ** | ||||||
hg38:Y:21753059-C-A | ** | ||||||
hg19:Y:24502298-C-A hg38:Y:22356151-C-A | ** | ||||||
hg19:Y:27860817-A-G hg38:Y:25714670-A-G | P1_Y2 | ** | |||||
hg19:Y:27967386-C-A hg38:Y:25821239-C-A | P1_Y2 | ** | |||||
hg19:Y:27967386-CAT-C hg38:Y:25821239-CAT-C | P1_Y2 | ** | |||||
hg19:Y:28514601-C-G hg38:Y:26368454-C-G | ** | ||||||
hg19:Y:28598556-C-A hg38:Y:26452409-C-A | ** | ||||||
hg19:Y:28633615-G-C hg38:Y:26487468-G-C | ** | ||||||
hg19:Y:28762338-C-A hg38:Y:26616191-C-A | ** | ||||||
hg38:Y:56763477-G-A | ** | ||||||
hg38:Y:56841517-C-A | ** | ||||||
hg38:Y:56849659-G-T | ** | ||||||
hg38:Y:56857905-G-T | ** | ||||||
hg19:Y:21261826-T-TA hg38:Y:19099940-T-TA | 26×A | *** | |||||
hg19:Y:7307494-T-TAG hg38:Y:7439453-T-TAG | 11×AG | *** | |||||
hg19:Y:8757820-A-AT hg38:Y:8889779-A-AT | 10×T | *** | |||||
hg19:Y:2682008-TA-T hg38:Y:2813967-TA-T | 10×A | *** | |||||
hg19:Y:13486559-A-T hg38:Y:11330883-A-T | *** | ||||||
hg19:Y:8703659-AT-A,ATT hg38:Y:8835618-AT-A,ATT | 18×T | *** | |||||
hg19:Y:15324319-CTT-C,CT hg38:Y:13212437-CTT-C,CT | 25×T | *** | |||||
hg19:Y:28545438-C-A hg38:Y:26399291-C-A | *** | ||||||
hg38:Y:10685586-G-C | *** | ||||||
hg19:Y:15581093-CTT-C,CT hg38:Y:13469213-CTT-C,CT | 16×T | *** | |||||
hg38:Y:10685529-C-T | *** | ||||||
hg38:Y:10978773-C-A | *** | ||||||
hg19:Y:15365934-G-T hg38:Y:13254054-G-T | *** | ||||||
hg19:Y:28784420-G-A hg38:Y:26638273-G-A | *** | ||||||
hg19:Y:15392810-TAA-T hg38:Y:13280930-TAA-T | 13×A | *** | |||||
hg19:Y:21961392-C-A hg38:Y:19799506-C-A | *** | ||||||
hg19:Y:5455029-C-A hg38:Y:5586988-C-A | *** | ||||||
hg38:Y:10682547-C-A | BY83692 | *** | |||||
hg38:Y:10934737-T-A,C | *** | ||||||
hg38:Y:10934765-A-G,T | *** | ||||||
hg19:Y:13468609-G-T hg38:Y:11312933-G-T | *** | ||||||
hg19:Y:15495460-CAAAA-C,CAAA hg38:Y:13383580-CAAAA-C,CAAA | 16×A | *** | |||||
hg19:Y:18923983-G-GAA hg38:Y:16812103-G-GAA | 22×A | *** | |||||
hg38:Y:10880242-C-A | *** | ||||||
hg38:Y:56850754-C-CT | *** | ||||||
hg19:Y:16989346-C-A hg38:Y:14877466-C-A | *** | ||||||
hg19:Y:22200355-CAAAA-C hg38:Y:20038469-CAAAA-C | 13×A | *** | |||||
hg19:Y:14096618-TA-T,TAA hg38:Y:11975912-TA-T,TAA | 17×A | *** | |||||
hg38:Y:11022956-CCACT-C | *** | ||||||
hg38:Y:11022939-C-A | *** | ||||||
hg19:Y:13255615-C-A hg38:Y:11099939-C-A | *** | ||||||
hg38:Y:10624851-A-T | *** | ||||||
hg38:Y:10624852-T-C | *** | ||||||
hg19:Y:3622072-C-A hg38:Y:3754031-C-A | *** | ||||||
hg19:Y:22747717-C-CTT hg38:Y:20585831-C-CTT | 14×T | *** | |||||
hg38:Y:10667788-T-C | *** | ||||||
hg19:Y:21187145-CT-C hg38:Y:19025259-CT-C | 9×T | *** | |||||
hg19:Y:8139737-C-A hg38:Y:8271696-C-A | *** | ||||||
hg19:Y:18401507-C-A hg38:Y:16289627-C-A | P6_Gap | *** | |||||
hg38:Y:10678653-C-A | *** | ||||||
hg19:Y:19345954-C-A hg38:Y:17234074-C-A | *** | ||||||
hg19:Y:15744559-C-A hg38:Y:13632679-C-A | *** | ||||||
hg38:Y:56840137-C-A | *** | ||||||
hg19:Y:15864264-C-A hg38:Y:13752384-C-A | *** | ||||||
hg19:Y:14825145-T-A hg38:Y:12713212-T-A | *** | ||||||
hg19:Y:9787241-C-A hg38:Y:9949632-C-A | *** | ||||||
hg19:Y:17490867-C-A hg38:Y:15378987-C-A | *** | ||||||
hg19:Y:3626700-A-G hg38:Y:3758659-A-G | *** | ||||||
hg19:Y:6146470-T-C hg38:Y:6278429-T-C | IR3_Dst | *** | |||||
hg19:Y:6427254-C-A hg38:Y:6559213-C-A | *** | ||||||
hg19:Y:6989107-TAAAAA-T,TAAA hg38:Y:7121066-TAAAAA-T,TAAA | 23×A | *** | |||||
hg19:Y:7164616-G-T hg38:Y:7296575-G-T | *** | ||||||
hg19:Y:7184066-C-A hg38:Y:7316025-C-A | *** | ||||||
hg19:Y:7349515-C-A hg38:Y:7481474-C-A | *** | ||||||
hg19:Y:7770290-G-T hg38:Y:7902249-G-T | *** | ||||||
hg19:Y:7976304-A-G hg38:Y:8108263-A-G | *** | ||||||
hg19:Y:8234398-C-A hg38:Y:8366357-C-A | *** | ||||||
hg19:Y:8408491-C-A hg38:Y:8540450-C-A | *** | ||||||
hg19:Y:8513512-C-A hg38:Y:8645471-C-A | *** | ||||||
hg19:Y:8699871-C-A hg38:Y:8831830-C-A | *** | ||||||
hg19:Y:8801442-C-A hg38:Y:8933401-C-A | *** | ||||||
hg19:Y:9306671-C-A hg38:Y:9469062-C-A | *** | ||||||
hg19:Y:9777568-A-G hg38:Y:9939959-A-G | *** | ||||||
hg38:Y:10798791-C-A | *** | ||||||
hg38:Y:10884676-C-A | *** | ||||||
hg38:Y:10965551-CTCCATTCCATTCCATTCCATTCCAT-C | *** | ||||||
hg38:Y:10978818-ATTTCTTTCT-A | *** | ||||||
hg38:Y:11021024-C-A | *** | ||||||
hg19:Y:13227884-G-T hg38:Y:11072208-G-T | *** | ||||||
hg38:Y:11669680-G-T | DYZ17 | *** | |||||
hg19:Y:13919377-A-G hg38:Y:11798671-A-G | *** | ||||||
hg19:Y:14215718-C-A hg38:Y:12095012-C-A | *** | ||||||
hg19:Y:14424178-G-T hg38:Y:12303453-G-T | *** | ||||||
hg19:Y:14426037-AAT-A,AATAT hg38:Y:12305312-AAT-A,AATAT | 8×AT | *** | |||||
hg19:Y:14475783-T-C hg38:Y:12355052-T-C | *** | ||||||
hg19:Y:14718817-G-T hg38:Y:12606885-G-T | *** | ||||||
hg19:Y:14807834-C-A hg38:Y:12695905-C-A | *** | ||||||
hg19:Y:15219585-C-A hg38:Y:13107671-C-A | *** | ||||||
hg19:Y:15348220-A-G hg38:Y:13236339-A-G | *** | ||||||
hg19:Y:15481318-C-T hg38:Y:13369438-C-T | *** | ||||||
hg19:Y:15508894-G-A hg38:Y:13397014-G-A | *** | ||||||
hg19:Y:15661592-C-A hg38:Y:13549712-C-A | *** | ||||||
hg19:Y:15731712-C-A hg38:Y:13619832-C-A | *** | ||||||
hg19:Y:15739265-C-A hg38:Y:13627385-C-A | *** | ||||||
hg19:Y:15791420-A-G hg38:Y:13679540-A-G | *** | ||||||
hg19:Y:15976272-C-A hg38:Y:13864392-C-A | *** | ||||||
hg19:Y:16236284-G-T hg38:Y:14124404-G-T | *** | ||||||
hg19:Y:16333714-T-G hg38:Y:14221834-T-G | *** | ||||||
hg19:Y:16813808-C-A hg38:Y:14701928-C-A | *** | ||||||
hg19:Y:17173650-C-A hg38:Y:15061770-C-A | *** | ||||||
hg19:Y:18005760-G-A hg38:Y:15893880-G-A | P7_Gap | *** | |||||
hg19:Y:18554008-T-TA hg38:Y:16442128-T-TA | 8×A | *** | |||||
hg19:Y:18600181-C-A hg38:Y:16488301-C-A | *** | ||||||
hg19:Y:18841225-C-A hg38:Y:16729345-C-A | *** | ||||||
hg19:Y:18884523-C-A hg38:Y:16772643-C-A | *** | ||||||
hg19:Y:21082172-C-A hg38:Y:18920286-C-A | *** | ||||||
hg19:Y:21719909-C-A hg38:Y:19558023-C-A | *** | ||||||
hg19:Y:22098125-C-A hg38:Y:19936239-C-A | *** | ||||||
hg19:Y:22159706-C-A hg38:Y:19997820-C-A | *** | ||||||
hg19:Y:23132126-C-A hg38:Y:20970240-C-A | *** | ||||||
hg19:Y:23378990-C-A hg38:Y:21217104-C-A | *** | ||||||
hg19:Y:23392809-C-A hg38:Y:21230923-C-A | *** | ||||||
hg19:Y:23465910-G-T hg38:Y:21304024-G-T | *** | ||||||
hg19:Y:23534343-T-C hg38:Y:21372457-T-C | *** | ||||||
hg19:Y:23561564-C-A hg38:Y:21399678-C-A | *** | ||||||
hg19:Y:28645684-C-A hg38:Y:26499537-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 563428 | 8897096 | 7269614 | 7202645 |
Used in age calculations | 8897096 | 7269614 | 7202645 |
Counts of SNPs | 7 | 6 |
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