Gallagher
FTDNA: 143870, BigY2: 143870MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 143870 | BigY2 143870 |
---|---|---|---|---|---|---|---|---|---|
6324434-C-T | 6456393-C-T | IR3_Dst | *** | A* | |||||
18379726-G-A | 16267846-G-A | P6_Prx | *** | A* | |||||
8350107-T-C | 8482066-T-C | BY71880 | Y | Y | + | + | |||
8418725-T-G | 8550684-T-G | BY72534 | Y | Y | + | + | |||
14396742-C-T | 12276038-C-T | BY95421 | Y | Y | + | + | |||
14479114-T-C | 12358383-T-C | BY96001 | Y | Y | + | + | |||
14558985-C-G | 12447186-C-G | BY96486 | Y | Y | + | + | |||
15500897-A-G | 13389017-A-G | BY102014 | Y | Y | + | + | |||
16193703-C-T | 14081823-C-T | BY105889 | Y | Y | + | + | |||
21784558-C-G | 19622672-C-G | BY135455 | Y | Y | + | + | |||
21784559-G-A | 19622673-G-A | BY135456 | Y | Y | + | + | |||
28774343-G-A | 26628196-G-A | BY151151 | ** | + | |||||
15752353-C-G | 13640473-C-G | Y | Y | *** | * | ||||
15754826-G-A | 13642946-G-A | Y | Y | *** | * | ||||
22230437-A-C | 20068551-A-C | DYZ19 | *** | * | |||||
22232909-G-T | 20071023-G-T | DYZ19 | *** | * | |||||
7319200-T-A | 7451159-T-A | ** | ** | ||||||
21491080-G-C | 19329194-G-C | ** | ** | ||||||
7359791-A-T | 7491750-A-T | 12×AT | ** | ||||||
14242007-C-A | 12121301-C-A | Z5410 | ** | ||||||
17997380-A-G | 15885500-A-G | Y10607 Z15747 | P7_Gap | ** | |||||
20511019-A-T | 18349133-A-T | P5_Dst | ** | ||||||
14283363-C-A | 12162657-C-A | FGC19759 | FGC31507 | ** | |||||
20040615-G-A | 17928735-G-A | P5_Prx | ** | ||||||
9125485-C-A | ** | ||||||||
18159265-C-A | 16047385-C-A | ** | |||||||
10629034-T-G | ** | ||||||||
10629052-C-T | ** | ||||||||
10629054-T-G | ** | ||||||||
10629061-C-T | ** | ||||||||
10629074-C-G | ** | ||||||||
10629082-CAA-C | ** | ||||||||
10629088-A-ACAT | ** | ||||||||
10629091-CT-C | ** | ||||||||
10629125-T-C | ** | ||||||||
10629135-T-C | ** | ||||||||
20673814-T-TG | 18511928-T-TG | P4_Prx | ** | ||||||
22427235-T-C | 20265349-T-C | DYZ19 | ** | ||||||
10801386-G-A | ** | ||||||||
6155555-T-TG | 6287514-T-TG | IR3_Dst | ** | ||||||
16309310-T-C | 14197430-T-C | ** | |||||||
15912055-CTTTTT-C | 13800175-CTTTTT-C | 21×T | ** | ||||||
17385590-CAA-C | 15273710-CAA-C | 12×A | ** | ||||||
18530995-G-T | 16419115-G-T | P6_Dst | ** | ||||||
10992332-T-C | ** | ||||||||
13236298-T-G | 11080622-T-G | ** | |||||||
7434014-C-A | 7565973-C-A | ** | |||||||
14285756-C-A | 12165050-C-A | ** | |||||||
26146916-C-A | 24000769-C-A | P1_Y1 | ** | ||||||
19235657-C-A | 17123777-C-A | ** | |||||||
10842687-A-C | ** | ||||||||
13505089-C-A | 11349413-C-A | ** | |||||||
16783412-T-A | 14671532-T-A | 13×A | ** | ||||||
10885252-A-T | ** | ||||||||
10759824-C-T | ** | ||||||||
14225284-C-A | 12104578-C-A | ** | |||||||
5576824-AC-A | 5708783-AC-A | ** | |||||||
23345603-C-A | 21183717-C-A | ** | |||||||
10788044-T-C | ** | ||||||||
10992372-C-T | ** | ||||||||
5851229-C-A | 5983188-C-A | ** | |||||||
5425909-AT-A | 5557868-AT-A | 10×T | ** | ||||||
6222842-A-AG | 6354801-A-AG | IR3_Dst | ** | ||||||
7188333-C-A | 7320292-C-A | ** | |||||||
10992348-T-C | ** | ||||||||
13895144-C-A | 11774438-C-A | ** | |||||||
10809435-C-T | ** | ||||||||
13708977-A-G | 11553301-A-G | ** | |||||||
10689513-C-A | ** | ||||||||
10813005-A-T | ** | ||||||||
7183851-TTTA-T | 7315810-TTTA-T | 5×TTA | ** | ||||||
22517389-C-A | 20355503-C-A | ** | |||||||
56836528-CCTTC-A | ** | ||||||||
9953288-C-G | 10115679-C-G | ** | |||||||
16164441-AC-A | 14052561-AC-A | P8_Dst | ** | ||||||
10933254-C-A | ** | ||||||||
10769017-C-G | ** | ||||||||
13234911-C-A | 11079235-C-A | ** | |||||||
16062162-C-A | 13950282-C-A | ** | |||||||
10759805-C-A | ** | ||||||||
20078760-A-AG | 17966880-A-AG | P5_Dst | ** | ||||||
28734894-C-A | 26588747-C-A | ** | |||||||
14035210-C-A | 11914504-C-A | ** | |||||||
10631406-C-G | ** | ||||||||
7347698-C-A | 7479657-C-A | ** | |||||||
10841176-T-C | ** | ||||||||
7100613-C-A | 7232572-C-A | ** | |||||||
9140181-G-T | 9302572-G-T | ** | |||||||
3116526-C-A | 3248485-C-A | ** | |||||||
28529743-C-A | 26383596-C-A | ** | |||||||
7170836-A-G | 7302795-A-G | ** | |||||||
7420641-C-A | 7552600-C-A | ** | |||||||
15178380-C-A | 13066466-C-A | ** | |||||||
4179166-C-A | 4311125-C-A | ** | |||||||
10792679-G-T | FT431407 | ** | |||||||
7148261-C-A | 7280220-C-A | ** | |||||||
23337243-C-A | 21175357-C-A | ** | |||||||
17433953-T-G | 15322073-T-G | ** | |||||||
22868830-C-CAA | 20706944-C-CAA | 10×A | ** | ||||||
14339106-CTTTTTTTT-C | 12218401-CTTTTTTTT-C | 19×T | ** | ||||||
22319066-A-G | 20157180-A-G | DYZ19 | ** | ||||||
14176421-C-A | 12055715-C-A | ** | |||||||
4983807-A-G | 5115766-A-G | ** | |||||||
6688671-C-A | 6820630-C-A | ** | |||||||
14379242-C-A | 12258538-C-A | ** | |||||||
19043747-C-A | 16931867-C-A | ** | |||||||
15622470-T-G | 13510590-T-G | ** | |||||||
14128312-C-T | 12007606-C-T | ** | |||||||
19041388-G-T | 16929508-G-T | ** | |||||||
21697175-C-A | 19535289-C-A | ** | |||||||
10985004-C-G | ** | ||||||||
3705161-C-A | 3837120-C-A | ** | |||||||
10664573-G-T | FT265161 | ** | |||||||
21211454-G-T | 19049568-G-T | ** | |||||||
5976532-C-A | 6108491-C-A | ** | |||||||
2866845-C-A | 2998804-C-A | ** | |||||||
2968020-C-A | 3099979-C-A | ** | |||||||
3033050-A-C | 3165009-A-C | ** | |||||||
3033071-T-C | 3165030-T-C | ** | |||||||
3033072-A-C | 3165031-A-C | ** | |||||||
3046911-T-A | 3178870-T-A | ** | |||||||
3046943-G-A | 3178902-G-A | ** | |||||||
3079559-AAT-A | 3211518-AAT-A | ** | |||||||
3158688-C-G | 3290647-C-G | ** | |||||||
3359533-C-A | 3491492-C-A | ** | |||||||
3408852-C-A | 3540811-C-A | ** | |||||||
3467157-A-G | 3599116-A-G | ** | |||||||
3491553-C-A | 3623512-C-A | ** | |||||||
3545911-G-T | 3677870-G-T | FT165638 | ** | ||||||
3610314-C-A | 3742273-C-A | ** | |||||||
3649202-C-A | 3781161-C-A | ** | |||||||
3681441-C-G | 3813400-C-G | ** | |||||||
3721428-C-A | 3853387-C-A | ** | |||||||
3765007-A-G | 3896966-A-G | ** | |||||||
3765010-C-A | 3896969-C-A | ** | |||||||
3877049-G-C | 4009008-G-C | ** | |||||||
3965809-G-C | 4097768-G-C | ** | |||||||
4137884-A-C | 4269843-A-C | ** | |||||||
4172411-G-T | 4304370-G-T | ** | |||||||
4179065-C-A | 4311024-C-A | ** | |||||||
4179082-A-T | 4311041-A-T | ** | |||||||
4179141-A-T | 4311100-A-T | ** | |||||||
4179150-C-G | 4311109-C-G | ** | |||||||
4215745-C-T | 4347704-C-T | ** | |||||||
4223522-C-A | 4355481-C-A | ** | |||||||
4241455-C-A | 4373414-C-A | ** | |||||||
4448668-C-A | 4580627-C-A | ** | |||||||
4448772-A-G | 4580731-A-G | ** | |||||||
4462305-G-T | 4594264-G-T | ** | |||||||
4470823-G-T | 4602782-G-T | ** | |||||||
4523654-G-T | 4655613-G-T | ** | |||||||
4533495-C-A | 4665454-C-A | ** | |||||||
4605111-C-T | 4737070-C-T | ** | |||||||
4723638-G-T | 4855597-G-T | ** | |||||||
4723642-G-T | 4855601-G-T | ** | |||||||
4840079-C-A | 4972038-C-A | ** | |||||||
4868963-G-T | 5000922-G-T | ** | |||||||
4898346-C-A | 5030305-C-A | ** | |||||||
4905511-G-C | 5037470-G-C | ** | |||||||
4983551-A-G | 5115510-A-G | ** | |||||||
5073884-GA-G | 5205843-GA-G | ** | |||||||
5125565-C-G | 5257524-C-G | ** | |||||||
5194319-C-A | 5326278-C-A | ** | |||||||
5225236-A-C | 5357195-A-C | ** | |||||||
5241697-T-C | 5373656-T-C | ** | |||||||
5241726-T-C | 5373685-T-C | ** | |||||||
5241737-A-C | 5373696-A-C | ** | |||||||
5335356-G-A | 5467315-G-A | ** | |||||||
5374812-C-A | 5506771-C-A | ** | |||||||
5448623-T-G | 5580582-T-G | ** | |||||||
5522950-T-A | 5654909-T-A | ** | |||||||
5537391-C-A | 5669350-C-A | ** | |||||||
5582360-G-T | 5714319-G-T | ** | |||||||
5583952-T-C | 5715911-T-C | ** | |||||||
5604744-G-T | 5736703-G-T | ** | |||||||
5609695-C-A | 5741654-C-A | ** | |||||||
5609750-C-T | 5741709-C-T | ** | |||||||
5609851-C-A | 5741810-C-A | ** | |||||||
5615178-C-A | 5747137-C-A | ** | |||||||
5696820-C-A | 5828779-C-A | ** | |||||||
5709350-G-C | 5841309-G-C | ** | |||||||
5721015-T-G | 5852974-T-G | ** | |||||||
5774965-C-A | 5906924-C-A | ** | |||||||
5923491-C-A | 6055450-C-A | ** | |||||||
5956737-T-C | 6088696-T-C | ** | |||||||
5976519-T-A | 6108478-T-A | ** | |||||||
6001513-C-A | 6133472-C-A | ** | |||||||
6037850-A-G | 6169809-A-G | ** | |||||||
6090071-G-C | 6222030-G-C | ** | |||||||
6097021-A-C | 6228980-A-C | ** | |||||||
6241001-A-C | 6372960-A-C | IR3_Dst | ** | ||||||
6241077-G-C | 6373036-G-C | IR3_Dst | ** | ||||||
6246995-G-T | 6378954-G-T | IR3_Dst | ** | ||||||
6417862-T-C | 6549821-T-C | ** | |||||||
6511942-G-T | 6643901-G-T | ** | |||||||
6511954-T-G | 6643913-T-G | ** | |||||||
6553460-C-A | 6685419-C-A | ** | |||||||
6752140-G-A | 6884099-G-A | ** | |||||||
6996688-A-C | 7128647-A-C | ** | |||||||
6996720-G-C | 7128679-G-C | ** | |||||||
7040063-A-G | 7172022-A-G | ** | |||||||
7045610-C-G | 7177569-C-G | ** | |||||||
7058287-C-T | 7190246-C-T | ** | |||||||
7061165-T-C | 7193124-T-C | ** | |||||||
7061500-A-C | 7193459-A-C | ** | |||||||
7087951-C-A | 7219910-C-A | ** | |||||||
7115011-G-C | 7246970-G-C | ** | |||||||
7134154-T-C | 7266113-T-C | ** | |||||||
7142434-G-A | 7274393-G-A | ** | |||||||
7154713-C-T | 7286672-C-T | ** | |||||||
7170783-A-G | 7302742-A-G | ** | |||||||
7201507-A-G | 7333466-A-G | ** | |||||||
7257920-A-T | 7389879-A-T | ** | |||||||
7288186-C-A | 7420145-C-A | ** | |||||||
7311180-G-A | 7443139-G-A | ** | |||||||
7409644-T-C | 7541603-T-C | ** | |||||||
7469207-T-G | 7601166-T-G | IR1_L | ** | ||||||
7664754-C-A | 7796713-C-A | ** | |||||||
7758396-G-T | 7890355-G-T | ** | |||||||
7758445-G-C | 7890404-G-C | ** | |||||||
7861102-G-A | 7993061-G-A | ** | |||||||
7917153-A-C | 8049112-A-C | ** | |||||||
7964749-T-C | 8096708-T-C | ** | |||||||
8051905-G-C | 8183864-G-C | Y85714 | ** | ||||||
8290852-C-A | 8422811-C-A | ** | |||||||
8325633-G-T | 8457592-G-T | ** | |||||||
8720569-C-A | 8852528-C-A | ** | |||||||
8735595-C-G | 8867554-C-G | ** | |||||||
8816994-C-G | 8948953-C-G | ** | |||||||
8822564-A-T | 8954523-A-T | ** | |||||||
8851593-T-G | 8983552-T-G | ** | |||||||
9015444-C-A | 9177835-C-A | ** | |||||||
9436798-A-C | 9599189-A-C | ** | |||||||
9620172-A-AG | 9782563-A-AG | IR3_Prx | ** | ||||||
9943650-G-A | 10106041-G-A | ** | |||||||
9963347-A-T | 10125738-A-T | ** | |||||||
9965175-C-G | 10127566-C-G | ** | |||||||
9977373-C-A | 10139764-C-A | ** | |||||||
10012728-G-C | 10175119-G-C | ** | |||||||
10012860-C-G | 10175251-C-G | ** | |||||||
10050081-G-A | 10212472-G-A | ** | |||||||
10646703-A-G | ** | ||||||||
10660377-C-A | ** | ||||||||
10669224-A-C | ** | ||||||||
10693470-A-C | ** | ||||||||
10752188-C-A | ** | ||||||||
10752662-C-A | ** | ||||||||
10752673-A-G | ** | ||||||||
10764364-C-A | ** | ||||||||
10767751-C-A | ** | ||||||||
10772843-T-C | ** | ||||||||
10790062-G-A | ** | ||||||||
10790498-C-A | ** | ||||||||
10791894-C-A | ** | ||||||||
10801380-T-C | ** | ||||||||
10802640-C-CGTTCA | ** | ||||||||
10809038-C-A | ** | ||||||||
10814894-C-T | ** | ||||||||
10814896-C-A | ** | ||||||||
10833756-A-C | ** | ||||||||
10870051-C-T | ** | ||||||||
10872517-A-C | ** | ||||||||
10885192-C-G | ** | ||||||||
10885223-A-ATTCGGT | ** | ||||||||
10885257-T-G | ** | ||||||||
10889875-C-A | BY162029 | FT268714 | ** | ||||||
10896297-C-A | ** | ||||||||
10926474-T-C | ** | ||||||||
10927351-C-A | ** | ||||||||
10973621-C-A | ** | ||||||||
10985777-TC-T | ** | ||||||||
13222005-G-A | 11066329-G-A | ** | |||||||
13225985-C-A | 11070309-C-A | ** | |||||||
13227212-C-G | 11071536-C-G | ** | |||||||
13237656-C-A | 11081980-C-A | ** | |||||||
13304778-C-A | 11149102-C-A | ** | |||||||
13469528-T-C | 11313852-T-C | ** | |||||||
13487759-C-CCCT | 11332083-C-CCCT | ** | |||||||
13491139-C-A | 11335463-C-A | ** | |||||||
13513552-A-G | 11357876-A-G | ** | |||||||
13550446-A-G | 11394770-A-G | ** | |||||||
13567742-A-G | 11412066-A-G | ** | |||||||
13596475-C-A | 11440799-C-A | ** | |||||||
13605849-A-C | 11450173-A-C | ** | |||||||
13726088-A-C | 11570412-A-C | ** | |||||||
11676970-T-C | ** | ||||||||
13855008-A-G | 11734302-A-G | ** | |||||||
13870736-C-A | 11750030-C-A | ** | |||||||
13880027-C-A | 11759321-C-A | ** | |||||||
13896934-G-A | 11776228-G-A | ** | |||||||
13899406-T-G | 11778700-T-G | ** | |||||||
13921031-G-A | 11800325-G-A | ** | |||||||
13927027-C-T | 11806321-C-T | ** | |||||||
13938744-C-G | 11818038-C-G | ** | |||||||
13939827-G-C | 11819121-G-C | ** | |||||||
14017394-A-T | 11896688-A-T | ** | |||||||
14030152-G-T | 11909446-G-T | ** | |||||||
14100289-A-G | 11979583-A-G | ** | |||||||
14123459-A-T | 12002753-A-T | ** | |||||||
14128334-A-C | 12007628-A-C | ** | |||||||
14128365-A-T | 12007659-A-T | ** | |||||||
14136142-T-G | 12015436-T-G | ** | |||||||
14152256-T-A | 12031550-T-A | ** | |||||||
14255161-G-C | 12134455-G-C | ** | |||||||
14301702-G-A | 12180996-G-A | ** | |||||||
14312002-G-T | 12191296-G-T | ** | |||||||
14361741-T-G | 12241036-T-G | ** | |||||||
14361792-G-T | 12241087-G-T | ** | |||||||
14366745-T-G | 12246040-T-G | ** | |||||||
14380014-T-C | 12259310-T-C | FT153748 | ** | ||||||
14450099-C-T | 12329372-C-T | ** | |||||||
14450149-A-G | 12329422-A-G | ** | |||||||
14485834-T-G | 12365103-T-G | ** | |||||||
14517655-T-A | 12405856-T-A | ** | |||||||
14575588-C-A | 12463788-C-A | ** | |||||||
14620128-C-A | 12508326-C-A | ** | |||||||
14682966-C-A | 12571032-C-A | ** | |||||||
14711987-C-G | 12600054-C-G | ** | |||||||
14715337-A-G | 12603404-A-G | ** | |||||||
14716998-A-C | 12605066-A-C | ** | |||||||
14718766-G-C | 12606834-G-C | ** | |||||||
14718797-A-C | 12606865-A-C | ** | |||||||
14757958-C-A | 12646027-C-A | ** | |||||||
14802833-G-A | 12690904-G-A | ** | |||||||
14931817-C-A | 12819882-C-A | ** | |||||||
14933529-A-C | 12821594-A-C | ** | |||||||
14965249-T-G | 12853324-T-G | ** | |||||||
15080698-G-T | 12968788-G-T | ** | |||||||
15080701-T-C | 12968791-T-C | ** | |||||||
15115362-C-A | 13003449-C-A | ** | |||||||
15117287-G-T | 13005374-G-T | ** | |||||||
15127762-C-A | 13015849-C-A | ** | |||||||
15127980-G-C | 13016067-G-C | ** | |||||||
15143473-C-G | 13031560-C-G | ** | |||||||
15423115-G-T | 13311235-G-T | ** | |||||||
15423146-G-T | 13311266-G-T | ** | |||||||
15515245-C-T | 13403365-C-T | ** | |||||||
15622425-C-A | 13510545-C-A | ** | |||||||
15622483-A-C | 13510603-A-C | ** | |||||||
15658148-G-T | 13546268-G-T | ** | |||||||
15677179-T-G | 13565299-T-G | ** | |||||||
15677195-A-G | 13565315-A-G | ** | |||||||
15682757-C-A | 13570877-C-A | ** | |||||||
15733641-G-A | 13621761-G-A | ** | |||||||
15912079-G-C | 13800199-G-C | ** | |||||||
15918899-G-T | 13807019-G-T | ** | |||||||
15923065-G-T | 13811185-G-T | FT105238 | ** | ||||||
15995256-A-C | 13883376-A-C | ** | |||||||
16003254-C-A | 13891374-C-A | ** | |||||||
16009377-C-A | 13897497-C-A | ** | |||||||
16016931-G-C | 13905051-G-C | ** | |||||||
16016938-T-C | 13905058-T-C | ** | |||||||
16034293-C-A | 13922413-C-A | ** | |||||||
16056063-G-T | 13944183-G-T | ** | |||||||
16059671-A-G | 13947791-A-G | ** | |||||||
16067015-A-G | 13955135-A-G | ** | |||||||
16245572-G-T | 14133692-G-T | ** | |||||||
16245675-G-T | 14133795-G-T | ** | |||||||
16272233-C-A | 14160353-C-A | ** | |||||||
16278549-G-A | 14166669-G-A | ** | |||||||
16336923-G-C | 14225043-G-C | ** | |||||||
16351834-A-G | 14239954-A-G | ** | |||||||
16379356-T-A | 14267476-T-A | ** | |||||||
16422945-C-A | 14311065-C-A | ** | |||||||
16428723-A-T | 14316843-A-T | ** | |||||||
16539839-A-G | 14427959-A-G | ** | |||||||
16612568-C-A | 14500688-C-A | ** | |||||||
16620767-G-C | 14508887-G-C | ** | |||||||
16620776-A-T | 14508896-A-T | ** | |||||||
16620783-G-C | 14508903-G-C | ** | |||||||
16620864-A-C | 14508984-A-C | ** | |||||||
16914385-A-C | 14802505-A-C | ** | |||||||
17095453-C-A | 14983573-C-A | ** | |||||||
17211530-G-T | 15099650-G-T | M4017 | ** | ||||||
17250813-A-G | 15138933-A-G | ** | |||||||
17363102-C-A | 15251222-C-A | ** | |||||||
17374414-C-A | 15262534-C-A | ** | |||||||
17464876-C-A | 15352996-C-A | ** | |||||||
17478880-G-C | 15367000-G-C | ** | |||||||
17478943-G-A | 15367063-G-A | ** | |||||||
17478967-A-C | 15367087-A-C | ** | |||||||
17527287-C-T | 15415407-C-T | ** | |||||||
17538750-A-G | 15426870-A-G | ** | |||||||
17547858-C-T | 15435978-C-T | ** | |||||||
17580240-C-A | 15468360-C-A | ** | |||||||
17648355-A-G | 15536475-A-G | ** | |||||||
17721028-C-T | 15609148-C-T | ** | |||||||
17795684-T-A | 15683804-T-A | ** | |||||||
17795716-T-C | 15683836-T-C | ** | |||||||
17854484-GT-G | 15742604-GT-G | ** | |||||||
17898367-T-C | 15786487-T-C | ** | |||||||
17923488-G-A | 15811608-G-A | ** | |||||||
18194183-G-A | 16082303-G-A | ** | |||||||
18196074-A-C | 16084194-A-C | ** | |||||||
18409985-C-G | 16298105-C-G | P6_Gap | ** | ||||||
18410940-A-T | 16299060-A-T | P6_Gap | ** | ||||||
18499787-C-A | 16387907-C-A | P6_Dst | ** | ||||||
18540155-C-A | 16428275-C-A | ** | |||||||
18753049-C-A | 16641169-C-A | ** | |||||||
18848191-C-A | 16736311-C-A | ** | |||||||
18848463-G-T | 16736583-G-T | Y102861 | ** | ||||||
18906291-C-A | 16794411-C-A | ** | |||||||
18932467-A-G | 16820587-A-G | ** | |||||||
18951332-C-A | 16839452-C-A | ** | |||||||
18989701-T-G | 16877821-T-G | ** | |||||||
19071462-C-A | 16959582-C-A | ** | |||||||
19168743-G-A | 17056863-G-A | ** | |||||||
19416785-A-G | 17304905-A-G | ** | |||||||
19464821-G-T | 17352941-G-T | ** | |||||||
19465626-G-C | 17353746-G-C | ** | |||||||
19465694-C-T | 17353814-C-T | FTA8619 | ** | ||||||
19509744-A-C | 17397864-A-C | ** | |||||||
19531363-C-A | 17419483-C-A | ** | |||||||
20021768-A-AAG | 17909888-A-AAG | P5_Prx | ** | ||||||
20040498-C-G | 17928618-C-G | BY53458 | P5_Prx | ** | |||||
20084137-T-C | 17972257-T-C | P5_Dst | ** | ||||||
20084151-AGAG-A | 17972271-AGAG-A | P5_Dst | ** | ||||||
20084163-A-T | 17972283-A-T | P5_Dst | ** | ||||||
20084173-A-T | 17972293-A-T | P5_Dst | ** | ||||||
20376597-CT-C | 18214711-CT-C | P5_Dst | ** | ||||||
20760064-T-TC | 18598178-T-TC | P4_Prx | ** | ||||||
20760127-A-C | 18598241-A-C | P4_Prx | ** | ||||||
21120859-C-A | 18958973-C-A | ** | |||||||
21120911-C-A | 18959025-C-A | ** | |||||||
21133419-T-C | 18971533-T-C | ** | |||||||
21153376-T-G | 18991490-T-G | ** | |||||||
21164706-C-A | 19002820-C-A | ** | |||||||
21196792-C-A | 19034906-C-A | ** | |||||||
21211163-C-T | 19049277-C-T | ** | |||||||
21297672-G-T | 19135786-G-T | ** | |||||||
21375670-C-A | 19213784-C-A | ** | |||||||
21393773-G-T | 19231887-G-T | ** | |||||||
21409015-T-G | 19247129-T-G | ** | |||||||
21409026-C-G | 19247140-C-G | ** | |||||||
21462468-A-C | 19300582-A-C | ** | |||||||
21491086-T-C | 19329200-T-C | ** | |||||||
21587403-G-T | 19425517-G-T | ** | |||||||
21748044-G-T | 19586158-G-T | ** | |||||||
21807001-T-A | 19645115-T-A | ** | |||||||
21915728-G-T | 19753842-G-T | ** | |||||||
21993953-T-C | 19832067-T-C | ** | |||||||
21999646-G-T | 19837760-G-T | ** | |||||||
22076232-G-A | 19914346-G-A | FT25885 | ** | ||||||
22091254-C-A | 19929368-C-A | ** | |||||||
22128865-T-C | 19966979-T-C | ** | |||||||
22146634-G-A | 19984748-G-A | ** | |||||||
22204123-C-A | 20042237-C-A | ** | |||||||
22235194-T-G | 20073308-T-G | DYZ19 | ** | ||||||
22335163-A-C | 20173277-A-C | DYZ19 | ** | ||||||
22366220-T-G | 20204334-T-G | DYZ19 | ** | ||||||
22366345-TG-T | 20204459-TG-T | DYZ19 | ** | ||||||
22537270-C-T | 20375384-C-T | ** | |||||||
22639267-A-G | 20477381-A-G | ** | |||||||
22775400-C-A | 20613514-C-A | ** | |||||||
22776944-T-A | 20615058-T-A | ** | |||||||
22798228-C-G | 20636342-C-G | ** | |||||||
22949929-G-A | 20788043-G-A | ** | |||||||
22995298-A-G | 20833412-A-G | ** | |||||||
22997436-C-G | 20835550-C-G | ** | |||||||
23009216-A-G | 20847330-A-G | ** | |||||||
23099833-C-A | 20937947-C-A | ** | |||||||
23104522-C-T | 20942636-C-T | ** | |||||||
23126619-C-A | 20964733-C-A | ** | |||||||
23144188-A-T | 20982302-A-T | ** | |||||||
23144197-G-T | 20982311-G-T | ** | |||||||
23144202-T-G | 20982316-T-G | ** | |||||||
23231385-C-T | 21069499-C-T | ** | |||||||
23285357-C-A | 21123471-C-A | ** | |||||||
23358941-C-A | 21197055-C-A | ** | |||||||
23837914-C-A | 21676028-C-A | ** | |||||||
24407334-T-G | 22261187-T-G | ** | |||||||
24466205-C-A | 22320058-C-A | ** | |||||||
25990589-A-G | 23844442-A-G | P1_Y1 | ** | ||||||
25995125-A-C | 23848978-A-C | P1_Y1 | ** | ||||||
25995131-A-C | 23848984-A-C | P1_Y1 | ** | ||||||
26089838-T-C | 23943691-T-C | P1_Y1 | ** | ||||||
26094184-C-G | 23948037-C-G | P1_Y1 | ** | ||||||
26094271-T-TG | 23948124-T-TG | P1_Y1 | ** | ||||||
26133374-G-T | 23987227-G-T | P1_Y1 | ** | ||||||
26146907-G-A | 24000760-G-A | P1_Y1 | ** | ||||||
26153980-T-A | 24007833-T-A | P1_Y1 | ** | ||||||
26161988-CCTT-C | 24015841-CCTT-C | P1_Y1 | ** | ||||||
26162036-T-G | 24015889-T-G | P1_Y1 | ** | ||||||
26325091-G-T | 24178944-G-T | P1_Y1 | ** | ||||||
27417741-T-G | 25271594-T-G | P1_g3 | ** | ||||||
27616625-C-A | 25470478-C-A | P1_Y2 | ** | ||||||
27872801-C-G | 25726654-C-G | P1_Y2 | ** | ||||||
28345691-A-ACC | 26199544-A-ACC | P1_gr2 | ** | ||||||
28465255-A-G | 26319108-A-G | ** | |||||||
28581638-TATATATATATATATATATATATATATATATA-T | 26435491-TATATATATATATATATATATATATATATATA-T | ** | |||||||
28589446-T-G | 26443299-T-G | ** | |||||||
28589490-A-G | 26443343-A-G | ** | |||||||
28601909-A-T | 26455762-A-T | ** | |||||||
28621889-C-T | 26475742-C-T | ** | |||||||
28712009-C-A | 26565862-C-A | ** | |||||||
28731330-C-G | 26585183-C-G | ** | |||||||
28764146-T-A | 26617999-T-A | ** | |||||||
28771479-A-C | 26625332-A-C | ** | |||||||
56825628-A-G | ** | ||||||||
56825660-T-G | ** | ||||||||
56880350-G-A | ** | ||||||||
7746-G-T | ** | ||||||||
15021-C-A | ** | ||||||||
27500-T-G | ** | ||||||||
7166644-T-A | 7298603-T-A | *** | |||||||
13458777-TGTTGA-T | 11303101-TGTTGA-T | *** | |||||||
13859994-T-G | 11739288-T-G | *** | |||||||
22453249-C-A | 20291363-C-A | DYZ19 | *** | ||||||
24156189-C-T | 22010042-C-T | P3_b1 | *** | ||||||
24722496-G-A | 22576349-G-A | P3_b2 | *** | ||||||
25027794-G-A | 22881647-G-A | g1 | *** | ||||||
25812910-T-G | 23666763-T-G | P1_b3 | *** | ||||||
27791912-CT-C | 25645765-CT-C | P1_Y2 | *** | ||||||
58979547-A-T | 56833400-A-T | *** | |||||||
13801175-AC-A | 11680469-AC-A | *** | |||||||
20040482-GGCAAGCACGCAAGCAC-G | 17928602-GGCAAGCACGCAAGCAC-G | P5_Prx | 4×GCAAGCAC | *** | |||||
21238008-A-C | 19076122-A-C | *** | |||||||
20132205-T-C | 18020325-T-C | BY160914 | P5_Dst | *** | |||||
8565786-AT-A | 8697745-AT-A | 10×T | *** | ||||||
17792264-T-G | 15680384-T-G | *** | |||||||
19079067-C-A | 16967187-C-A | *** | |||||||
10782871-C-A | *** | ||||||||
24415771-TA-T | 22269624-TA-T | *** | |||||||
16475324-CGG-C,CG | 14363444-CGG-C,CG | 11×G | *** | ||||||
10781059-T-C | *** | ||||||||
13475806-A-G | 11320130-A-G | *** | |||||||
10757984-CCACTA-C,CCACTC | *** | ||||||||
13489686-C-A | 11334010-C-A | *** | |||||||
2750839-CAAAAA-C,CAAA | 2882798-CAAAAA-C,CAAA | 16×A | *** | ||||||
8988012-G-T | 9150403-G-T | FT201243 | *** | ||||||
9907495-G-C | 10069886-G-C | *** | |||||||
10677895-C-T | *** | ||||||||
13454638-A-T | 11298962-A-T | *** | |||||||
15173496-TAA-T,TA | 13061582-TAA-T,TA | 11×A | *** | ||||||
15374441-GTT-G,GTTT | 13262561-GTT-G,GTTT | 20×T | *** | ||||||
15527638-C-A | 13415758-C-A | *** | |||||||
16412558-C-A | 14300678-C-A | *** | |||||||
17503555-C-A | 15391675-C-A | *** | |||||||
17860203-G-T | 15748323-G-T | *** | |||||||
56832511-CCACTC-C,CCACTG | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.