Tree Position

R-U106/S21 > Z2265 > Z381/S263 > Z301/S499 > L48 > Z9 > Z30/S271 > Z2 > Z7 > Z8 > ZZ58 > Z11 > Z12 > A5616 > ~20148952-T-A > BY13825 > BY20770 > BY20772

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
183466
20798770-T-A 18636884-T-A P4_Prx A*
16130404-G-A 14018524-G-A P8_Prx 15×AA*
14183-G-T +
15597090-G-T 13485210-G-T **
15221820-A-C 13109906-A-C **
15279537-C-A 13167636-C-A **
15285973-C-G 13174072-C-G **
15400433-C-A 13288553-C-A **
15404263-A-G 13292383-A-G **
15406766-T-G 13294886-T-G **
15431752-T-C 13319872-T-C **
15446767-C-A 13334887-C-A **
15490457-C-A 13378577-C-A **
15566757-C-A 13454877-C-A **
15616675-G-A 13504795-G-A Y50902 **
15597192-GT-G 13485312-GT-G **
15158934-C-G 13047020-C-G **
15685218-A-C 13573338-A-C **
15689106-T-A 13577226-T-A **
15727228-T-G 13615348-T-G **
15734304-C-T 13622424-C-T **
15735296-A-G 13623416-A-G **
15739784-C-T 13627904-C-T **
15745586-G-C 13633706-G-C **
15745615-T-A 13633735-T-A **
15747470-G-T 13635590-G-T **
15171448-G-C 13059534-G-C **
15111603-A-G 12999690-A-G **
15115559-C-G 13003646-C-G **
14760945-C-G 12649014-C-G **
14526706-C-A 12414907-C-A **
14528479-G-T 12416680-G-T **
14561230-G-T 12449431-G-T **
14568135-G-T 12456335-G-T **
14570161-A-G 12458361-A-G **
14607696-G-T 12495898-G-T **
14700631-T-C 12588697-T-C **
14716642-C-A 12604710-C-A **
14735166-C-A 12623234-C-A **
14735194-A-G 12623262-A-G **
14768420-A-C 12656489-A-C **
15790357-C-A 13678477-C-A **
14779571-C-A 12667641-C-A **
14786527-C-A 12674597-C-A **
14859114-C-A 12747180-C-A **
14931875-C-A 12819940-C-A **
14931877-T-C 12819942-T-C **
14948889-C-A 12836963-C-A **
14986651-G-T 12874719-G-T **
14986652-G-T 12874720-G-T **
15038240-G-T 12926330-G-T **
15066339-G-A 12954430-G-A **
15776222-A-C 13664342-A-C **
15860222-A-G 13748342-A-G **
14473769-C-A 12353038-C-A **
16980207-C-A 14868327-C-A **
16700180-G-T 14588300-G-T **
16703497-C-A 14591617-C-A **
16703951-G-T 14592071-G-T **
16707179-C-A 14595299-C-A **
16746175-C-A 14634295-C-A **
16909241-A-G 14797361-A-G **
16920035-C-A 14808155-C-A **
16932931-C-G 14821051-C-G **
16932996-G-A 14821116-G-A **
16945583-G-A 14833703-G-A **
16989970-C-A 14878090-C-A **
16505149-G-T 14393269-G-T **
17032741-C-T 14920861-C-T **
17061089-G-T 14949209-G-T **
17083175-C-A 14971295-C-A **
17093698-T-A 14981818-T-A **
17093865-C-A 14981985-C-A **
17118435-C-A 15006555-C-A **
17152910-C-A 15041030-C-A **
17181594-T-G 15069714-T-G **
17193013-T-C 15081133-T-C **
17193019-C-T 15081139-C-T **
16678637-C-A 14566757-C-A **
16479918-C-A 14368038-C-A **
15862559-C-G 13750679-C-G **
16048249-A-C 13936369-A-C **
15863056-T-C 13751176-T-C **
15866041-C-A 13754161-C-A **
15866795-G-A 13754915-G-A **
15870595-C-A 13758715-C-A **
15928578-C-T 13816698-C-T **
15941427-C-G 13829547-C-G **
15988137-T-G 13876257-T-G **
15995644-G-T 13883764-G-T **
16002108-C-A 13890228-C-A **
16016891-T-C 13905011-T-C **
16048316-G-C 13936436-G-C **
16429702-C-G 14317822-C-G **
16059970-C-G 13948090-C-G **
16092562-G-C 13980682-G-C **
16165144-A-AG 14053264-A-AG P8_Dst **
16271012-C-A 14159132-C-A **
16271899-C-A 14160019-C-A **
16284194-G-A 14172314-G-A **
16284224-G-A 14172344-G-A **
16295006-T-A 14183126-T-A **
16319847-G-C 14207967-G-C **
16342216-T-C 14230336-T-C **
16394656-C-A 14282776-C-A **
14515168-G-T 12403373-G-T **
14397748-G-T 12277044-G-T **
14413001-G-T 12292298-G-T **
11026339-C-A **
11001812-A-C **
11008825-C-A **
11008883-T-C **
11009225-TC-T **
11010599-C-T **
11018025-C-A **
11020704-C-A **
11021122-C-A **
11023171-C-A **
11026027-C-CAATTCCATTT **
13215303-C-A 11059627-C-A **
10998401-C-T **
13217289-G-T 11061613-G-T **
13222448-A-G 11066772-A-G **
13256865-T-TG 11101189-T-TG **
13256882-A-G 11101206-A-G **
13307183-G-T 11151507-G-T **
13313014-G-T 11157338-G-T **
13317255-G-T 11161579-G-T **
13323489-A-T 11167813-A-T **
13324938-C-T 11169262-C-T **
13384613-T-C 11228937-T-C **
10998413-T-C **
10998395-C-T **
13446421-T-G 11290745-T-G **
10930658-T-C **
10884560-T-G **
10888091-C-T **
10890035-C-T **
10892559-A-T **
10892573-C-CAATA **
10911240-G-T **
10915196-G-T **
10920963-C-A **
10923774-C-A **
10925475-A-G **
9777506-TC-T 9939897-TC-T **
10997396-C-A **
10942337-T-C **
10947828-C-A **
10951650-G-T **
10960820-A-C **
10967574-A-T **
10973999-CT-C **
10974003-ACT-A **
10976329-C-A **
10988889-C-A **
10991658-T-C **
13441632-G-GAAA 11285956-G-GAAA 11×A**
13474389-T-A 11318713-T-A **
17212434-A-G 15100554-A-G **
14147908-G-A 12027202-G-A **
13926987-CA-C 11806281-CA-C **
13937287-G-T 11816581-G-T **
13956765-T-G 11836059-T-G **
13996042-T-A 11875336-T-A **
14009561-C-A 11888855-C-A **
14011288-G-T 11890582-G-T **
14034834-G-A 11914128-G-A **
14071478-C-A 11950772-C-A **
14100372-G-T 11979666-G-T **
14136129-C-G 12015423-C-G **
14212672-G-T 12091966-G-T **
13870783-A-C 11750077-A-C **
14216264-T-C 12095558-T-C **
14218867-C-A 12098161-C-A **
14255066-G-C 12134360-G-C **
14273034-T-A 12152328-T-A **
14273666-G-T 12152960-G-T **
14315619-G-T 12194913-G-T **
14324983-A-T 12204277-A-T **
14355583-A-G 12234878-A-G **
14357949-T-A 12237244-T-A **
14366287-A-C 12245582-A-C **
13918884-C-A 11798178-C-A **
13865779-CGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATG-C 11745073-CGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATG-C 10×GAATG**
13474612-G-T 11318936-G-T **
11651654-T-A **
13481345-TAC-T 11325669-TAC-T **
13484769-C-A 11329093-C-A **
13544729-C-A 11389053-C-A **
13545098-C-G 11389422-C-G **
13608631-C-A 11452955-C-A **
13608644-T-C 11452968-T-C **
13625237-A-T 11469561-A-T **
13671557-C-A 11515881-C-A **
13698503-G-T 11542827-G-T **
11646657-A-G **
11653123-A-G **
13859778-T-C 11739072-T-C **
11656941-T-G **
11662667-T-G **
11662690-A-G **
11664829-T-C **
11664837-A-C **
11665787-A-T **
11668667-C-T **
11672969-A-C **
13809623-C-T 11688917-C-T **
13856027-A-C 11735321-A-C **
13858834-G-T 11738128-G-T **
17193026-C-A 15081146-C-A **
17284661-C-T 15172781-C-T **
17225921-C-A 15114041-C-A **
23372077-T-C 21210191-T-C **
22995419-A-G 20833533-A-G **
23004775-A-G 20842889-A-G **
23037930-C-A 20876044-C-A **
23121300-G-T 20959414-G-T **
23203776-G-T 21041890-G-T **
23206759-T-G 21044873-T-G **
23252637-T-G 21090751-T-G **
23285278-C-A 21123392-C-A **
23293570-G-T 21131684-G-T **
23310679-T-G 21148793-T-G **
23449160-T-G 21287274-T-G **
22949873-AC-A 20787987-AC-A **
23633465-T-G 21471579-T-G **
23788464-G-T 21626578-G-T **
23807543-T-G 21645657-T-G **
23808055-G-T 21646169-G-T **
23810643-G-T 21648757-G-T **
23867747-A-G 21705861-A-G **
23953100-A-G 21806953-A-G **
23953161-G-C 21807014-G-C **
23953263-G-A 21807116-G-A **
24373690-G-C 22227543-G-C **
22993511-T-G 20831625-T-G **
22914577-T-A 20752691-T-A **
24405490-C-G 22259343-C-G **
22085884-C-A 19923998-C-A **
21853530-C-A 19691644-C-A **
21874826-A-C 19712940-A-C **
21874849-A-T 19712963-A-T **
21874863-G-C 19712977-G-C **
21943939-C-A 19782053-C-A **
21975372-T-G 19813486-T-G **
22056249-T-C 19894363-T-C **
22079833-A-G 19917947-A-G **
22079927-T-A 19918041-T-A **
22084718-A-C 19922832-A-C **
22122156-C-A 19960270-C-A **
22868707-A-G 20706821-A-G **
22122158-C-G 19960272-C-G **
22192968-C-A 20031082-C-A **
22199477-A-G 20037591-A-G **
22199507-A-G 20037621-A-G **
22297820-G-T 20135934-G-T DYZ19 **
22362025-T-G 20200139-T-G DYZ19 **
22536742-A-G 20374856-A-G **
22625019-G-C 20463133-G-C **
22800710-G-C 20638824-G-C **
22804063-C-A 20642177-C-A **
24404463-A-G 22258316-A-G **
24450528-G-T 22304381-G-T **
21852254-T-A 19690368-T-A **
28755676-A-G 26609529-A-G **
28581513-A-T 26435366-A-T **
28618273-G-C 26472126-G-C **
28618347-A-C 26472200-A-C **
28621884-T-C 26475737-T-C **
28632745-T-A 26486598-T-A **
28632745-TC-T 26486598-TC-T **
28656121-C-A 26509974-C-A **
28697628-G-T 26551481-G-T **
28700374-G-T 26554227-G-T **
28700431-C-A 26554284-C-A **
28766200-G-T 26620053-G-T **
28570664-C-T 26424517-C-T **
28766217-C-A 26620070-C-A **
28776784-T-G 26630637-T-G **
28788550-T-G 26642403-T-G **
56837843-G-T **
56844675-G-T **
56860224-C-A **
56860231-C-A **
56876104-C-A **
56876245-C-A **
7063-G-T **
28581484-A-T 26435337-A-T **
28570561-C-A 26424414-C-A **
24910830-G-C 22764683-G-C g1 **
27527344-G-A 25381197-G-A P1_Y2 **
24910836-G-C 22764689-G-C g1 **
25560848-G-T 23414701-G-T P1_gr1 **
25592743-G-T 23446596-G-T P1_gr1 **
25994151-T-G 23848004-T-G P1_Y1 **
26133215-T-C 23987068-T-C P1_Y1 **
26248080-T-G 24101933-T-G P1_Y1 **
26248125-A-C 24101978-A-C P1_Y1 **
26355487-G-T 24209340-G-T P1_Y1 **
26538797-G-T 24392650-G-T P1_g2 **
27423672-C-A 25277525-C-A P1_g3 **
27576309-G-T 25430162-G-T P1_Y2 **
28550387-G-T 26404240-G-T **
27607930-A-C 25461783-A-C P1_Y2 **
27618318-C-A 25472171-C-A P1_Y2 **
27862447-G-T 25716300-G-T P1_Y2 **
27872470-C-A 25726323-C-A P1_Y2 **
28022530-A-G 25876383-A-G P1_Y2 **
28503952-C-A 26357805-C-A **
28506228-G-T 26360081-G-T **
28510258-A-T 26364111-A-T **
28529754-C-G 26383607-C-G **
28533775-G-T 26387628-G-T **
28544500-G-T 26398353-G-T **
21852374-A-C 19690488-A-C **
21824901-G-A 19663015-G-A Y37948 **
10870275-TC-T **
18602245-T-G 16490365-T-G **
18263853-T-G 16151973-T-G **
18271034-T-A 16159154-T-A **
18278061-G-T 16166181-G-T P6_Prx **
18295725-A-C 16183845-A-C P6_Prx **
18295774-T-TC 16183894-T-TC P6_Prx **
18465339-C-T 16353459-C-T P6_Dst **
18546903-C-T 16435023-C-T **
18547144-C-A 16435264-C-A **
18567886-A-C 16456006-A-C **
18589820-C-A 16477940-C-A **
18634792-C-A 16522912-C-A **
18185301-A-C 16073421-A-C **
18692755-C-A 16580875-C-A **
18707441-A-G 16595561-A-G **
18738297-TA-T 16626417-TA-T **
18753092-G-T 16641212-G-T **
18810724-A-C 16698844-A-C **
18838771-G-A 16726891-G-A **
18869808-T-G 16757928-T-G **
18880056-C-A 16768176-C-A **
18890521-A-G 16778641-A-G **
18950534-CCAGT-C 16838654-CCAGT-C **
18244573-C-A 16132693-C-A **
18174495-C-A 16062615-C-A **
18970318-CT-C 16858438-CT-C **
17580796-C-A 15468916-C-A **
17360414-G-T 15248534-G-T **
17372004-G-C 15260124-G-C **
17378501-G-A 15266621-G-A **
17395630-A-T 15283750-A-T **
17425212-T-G 15313332-T-G **
17535609-C-T 15423729-C-T **
17545821-G-T 15433941-G-T **
17560532-C-A 15448652-C-A **
17568484-A-G 15456604-A-G **
17576039-C-T 15464159-C-T FGC56674 **
17629822-A-G 15517942-A-G **
18150644-T-C 16038764-T-C **
17631731-T-C 15519851-T-C **
17693677-A-G 15581797-A-G **
17737487-A-C 15625607-A-C **
17821870-T-A 15709990-T-A **
17821870-TC-T 15709990-TC-T **
17831173-C-A 15719293-C-A **
17912930-C-A 15801050-C-A **
17923422-A-G 15811542-A-G **
18050611-T-G 15938731-T-G **
18086120-T-C 15974240-T-C **
18970313-T-C 16858433-T-C **
18972854-C-A 16860974-C-A **
21743005-A-G 19581119-A-G **
21151715-G-C 18989829-G-C **
20756792-T-G 18594906-T-G P4_Prx **
20756811-A-G 18594925-A-G P4_Prx **
20757286-T-TC 18595400-T-TC P4_Prx **
20840325-A-C 18678439-A-C P4_Gap **
20950452-G-T 18788566-G-T P4_Dst **
21037418-G-C 18875532-G-C **
21042085-C-T 18880199-C-T **
21042186-G-C 18880300-G-C **
21042299-T-C 18880413-T-C **
21097335-G-T 18935449-G-T **
21153531-A-C 18991645-A-C **
20554622-C-A 18392736-C-A P5_Dst **
21153598-T-C 18991712-T-C **
21211709-A-G 19049823-A-G **
21230062-A-G 19068176-A-G **
21384884-C-A 19222998-C-A **
21418563-G-T 19256677-G-T **
21427739-G-T 19265853-G-T **
21462654-C-A 19300768-C-A **
21468092-C-G 19306206-C-G **
21602706-C-A 19440820-C-A **
21616119-G-T 19454233-G-T **
20654966-C-A 18493080-C-A P4_Prx **
20336881-A-T 18174995-A-T P5_Dst **
19042677-C-A 16930797-C-A **
19299477-A-C 17187597-A-C **
19055515-G-C 16943635-G-C **
19068043-C-G 16956163-C-G **
19184638-T-A 17072758-T-A **
19187679-G-T 17075799-G-T **
19204455-G-T 17092575-G-T **
19223093-TC-T 17111213-TC-T **
19235817-A-G 17123937-A-G **
19248141-C-A 17136261-C-A **
19280757-C-A 17168877-C-A **
19299410-G-T 17187530-G-T **
19300273-T-C 17188393-T-C **
20336758-T-TC 18174872-T-TC P5_Dst **
19412432-C-A 17300552-C-A **
19508220-C-A 17396340-C-A **
19535611-G-A 17423731-G-A **
19557486-T-G 17445606-T-G **
19610158-AG-A 17498278-AG-A P5_Prx **
19899625-G-GAAGA 17787745-G-GAAGA P5_Prx **
19986305-T-A 17874425-T-A P5_Prx **
20004144-T-A 17892264-T-A P5_Prx **
20101579-G-T 17989699-G-T P5_Dst **
20104146-T-G 17992266-T-G P5_Dst **
20214281-C-A 18052395-C-A P5_Dst **
10882294-C-A **
10930917-A-T **
10868154-C-A **
2845272-G-T 2977231-G-T **
11656932-G-T **
22164513-A-C 20002627-A-C **
22022821-T-G 19860935-T-G **
3218321-C-A 3350280-C-A **
27303889-T-G 25157742-T-G P1_g3 **
8076704-C-A 8208663-C-A **
2698159-G-T 2830118-G-T **
2750845-A-G 2882804-A-G **
2772917-A-C 2904876-A-C **
2884889-T-G 3016848-T-G **
3274267-C-A 3406226-C-A **
2906701-C-A 3038660-C-A **
2959845-G-A 3091804-G-A **
2984940-T-A 3116899-T-A **
3116552-G-T 3248511-G-T **
3128867-G-T 3260826-G-T **
3171012-A-C 3302971-A-C **
3171036-A-C 3302995-A-C **
3189467-G-T 3321426-G-T **
3218113-G-T 3350072-G-T **
3253638-C-A 3385597-C-A **
28632863-C-A 26486716-C-A **
19049638-A-G 16937758-A-G **
3389908-G-C 3521867-G-C **
7754130-G-T 7886089-G-T **
15733759-T-A 13621879-T-A **
13394829-A-G 11239153-A-G **
6878773-C-A 7010732-C-A **
3609698-G-T 3741657-G-T **
14826539-G-T 12714606-G-T **
19853717-T-G 17741837-T-G P5_Prx **
18263854-CT-C 16151974-CT-C **
11004510-C-A **
10763124-T-TCGACTCCACTCCACG **
10763144-T-TCCAAA **
13928805-C-A 11808099-C-A **
8061705-C-A 8193664-C-A **
16707880-C-A 14596000-C-A **
7286822-A-C 7418781-A-C **
10998373-C-A **
23252603-G-T 21090717-G-T **
14361907-G-T 12241202-G-T **
2814876-C-A 2946835-C-A **
18443454-G-A 16331574-G-A P6_Dst 11×A**
27847762-G-GTA 25701615-G-GTA P1_Y2 **
10973884-A-T **
17576163-C-A 15464283-C-A **
3259817-C-A 3391776-C-A **
3391587-C-A 3523546-C-A **
15424476-C-A 13312596-C-A **
4794732-G-T 4926691-G-T **
4448746-T-G 4580705-T-G **
4497181-A-C 4629140-A-C **
4568192-G-A 4700151-G-A **
10847074-A-G **
4586138-A-C 4718097-A-C **
4687630-C-A 4819589-C-A **
4703071-A-T 4835030-A-T **
4785052-A-T 4917011-A-T **
4785156-C-A 4917115-C-A **
4867050-T-C 4999009-T-C **
4426123-A-C 4558082-A-C **
4898470-T-G 5030429-T-G **
4908205-A-T 5040164-A-T **
4920369-T-G 5052328-T-G **
4929332-G-T 5061291-G-T **
5022334-G-A 5154293-G-A **
5080439-C-G 5212398-C-G **
5080485-T-A 5212444-T-A **
5080561-A-T 5212520-A-T **
5107469-G-T 5239428-G-T **
5182404-G-T 5314363-G-T **
4447821-C-G 4579780-C-G **
4346474-C-A 4478433-C-A **
3409800-C-A 3541759-C-A **
3799512-A-G 3931471-A-G **
3411611-T-A 3543570-T-A **
3411612-T-A 3543571-T-A **
3483025-G-T 3614984-G-T **
3599417-C-A 3731376-C-A **
3620726-T-G 3752685-T-G **
3632544-T-A 3764503-T-A **
3681385-T-G 3813344-T-G **
3691877-A-G 3823836-A-G **
3712196-A-T 3844155-A-T **
3712226-G-T 3844185-G-T **
3799622-CCT-C 3931581-CCT-C **
4271553-G-T 4403512-G-T **
3957612-C-A 4089571-C-A **
3957706-G-T 4089665-G-T **
3988705-C-G 4120664-C-G **
4040126-G-T 4172085-G-T **
4103791-A-C 4235750-A-C **
4103869-C-A 4235828-C-A **
4213998-G-T 4345957-G-T **
4234624-A-G 4366583-A-G **
4236095-C-A 4368054-C-A **
4252306-C-A 4384265-C-A **
14366788-C-A 12246083-C-A **
17379982-C-A 15268102-C-A **
5221034-A-C 5352993-A-C **
14468392-C-A 12347661-C-A **
10895144-G-T **
3957610-T-G 4089569-T-G **
3957616-T-TC 4089575-T-TC 12×A**
13472293-C-A 11316617-C-A **
21219748-C-A 19057862-C-A **
7063894-C-A 7195853-C-A **
28483618-C-A 26337471-C-A **
5585937-C-A 5717896-C-A **
7758292-C-A 7890251-C-A **
10998402-T-G **
15777106-C-A 13665226-C-A **
11027296-C-T **
23009418-C-A 20847532-C-A **
7107587-C-A 7239546-C-A **
13222459-A-G 11066783-A-G **
10746270-T-G **
15739803-C-A 13627923-C-A Y94626 **
5785653-C-A 5917612-C-A **
5266997-C-A 5398956-C-A **
14009554-C-A 11888848-C-A **
18196251-G-T 16084371-G-T **
22122141-C-A 19960255-C-A **
14080158-C-A 11959452-C-A **
56876099-G-A **
20376717-C-A 18214831-C-A P5_Dst **
17083190-A-C 14971310-A-C **
23807559-C-T 21645673-C-T Z31176 **
14371288-C-A 12250584-C-A **
22286908-T-G 20125022-T-G DYZ19 **
18447673-A-T 16335793-A-T P6_Dst **
13481343-G-T 11325667-G-T **
19030290-G-T 16918410-G-T **
13485598-G-T 11329922-G-T **
28506283-C-A 26360136-C-A **
13952640-C-A 11831934-C-A **
14118226-C-A 11997520-C-A **
6881204-C-A 7013163-C-A **
6664433-G-T 6796392-G-T **
21796708-C-A 19634822-C-A **
9444812-C-A 9607203-C-A **
10648083-A-AC **
10648084-T-TGCAC **
3957629-T-TA 4089588-T-TA 7×AAATA**
10012849-C-A 10175240-C-A **
10849196-TATTCC-T **
10960841-C-A **
7237924-C-A 7369883-C-A **
6163587-A-G 6295546-A-G IR3_Dst **
16545403-G-A 14433523-G-A **
5969813-C-A 6101772-C-A **
10899866-C-A **
6147499-A-G 6279458-A-G IR3_Dst **
5459139-C-A 5591098-C-A **
24636409-G-T 22490262-G-T P3_t2 **
28732982-G-T 26586835-G-T **
19535618-C-A 17423738-C-A **
10940072-C-A **
13940934-G-A 11820228-G-A **
10952259-A-T **
56841730-G-T **
3409727-G-T 3541686-G-T **
14422790-G-T 12302065-G-T **
5858534-C-A 5990493-C-A **
22855306-G-T 20693420-G-T **
21513819-C-A 19351933-C-A **
21482795-A-C 19320909-A-C **
56857603-TAAA-T **
15940163-C-A 13828283-C-A **
14147921-G-A 12027215-G-A **
20508993-GA-G 18347107-GA-G P5_Dst **
9116792-G-T 9279183-G-T **
27808707-A-C 25662560-A-C P1_Y2 **
4133908-C-A 4265867-C-A **
15221797-C-A 13109883-C-A **
13394837-A-T 11239161-A-T **
26248104-G-GA 24101957-G-GA P1_Y1 **
11650472-G-T **
13936037-C-A 11815331-C-A **
14555196-C-A 12443397-C-A **
20250037-T-TC 18088151-T-TC P5_Dst **
27232186-TTC-T 25086039-TTC-T P1_g3 **
8760541-A-G 8892500-A-G **
28760196-C-A 26614049-C-A **
21153945-G-T 18992059-G-T **
7081351-C-A 7213310-C-A 8×A**
6646971-C-A 6778930-C-A **
8673209-C-A 8805168-C-A **
10892543-C-CAATA **
16077535-C-A 13965655-C-A **
5586719-C-A 5718678-C-A **
25994227-T-TC 23848080-T-TC P1_Y1 **
19145496-C-A 17033616-C-A **
56835864-C-A **
11008495-C-A **
13608646-TC-T 11452970-TC-T **
10645861-C-A **
18940695-C-A 16828815-C-A **
16705072-C-A 14593192-C-A **
9697242-C-A 9859633-C-A IR3_Prx **
5186300-T-C 5318259-T-C **
4568233-C-A 4700192-C-A **
5269840-A-C 5401799-A-C **
9055665-G-C **
8481392-TTA-T 8613351-TTA-T **
8661263-G-A 8793222-G-A **
8697963-T-C 8829922-T-C **
8728232-A-T 8860191-A-T **
8732863-G-T 8864822-G-T **
8807009-A-C 8938968-A-C **
8840561-T-G 8972520-T-G **
8855478-G-T 8987437-G-T **
9055605-C-A **
9109303-G-T **
8349299-G-T 8481258-G-T **
9048101-A-G 9210492-A-G **
9304519-T-C 9466910-T-C **
9351267-T-C 9513658-T-C **
9351275-T-C 9513666-T-C **
9436758-T-C 9599149-T-C **
9476913-A-G 9639304-A-G **
9502555-G-T 9664946-G-T **
9639042-G-T 9801433-G-T IR3_Prx **
9773398-A-C 9935789-A-C **
9832420-A-C 9994811-A-C **
8387621-GA-G 8519580-GA-G **
8349297-G-T 8481256-G-T **
9887152-G-T 10049543-G-T **
7958527-A-G 8090486-A-G **
7650225-A-G 7782184-A-G **
7695672-T-A 7827631-T-A **
7723561-A-C 7855520-A-C **
7754169-C-A 7886128-C-A **
7754354-C-A 7886313-C-A **
7759289-T-G 7891248-T-G **
7821275-G-T 7953234-G-T **
7824816-G-T 7956775-G-T **
7829318-G-A 7961277-G-A **
7860071-T-G 7992030-T-G **
7966316-G-T 8098275-G-T **
8349292-G-T 8481251-G-T **
7969623-G-T 8101582-G-T **
7969630-A-T 8101589-A-T **
5277939-C-A 5409898-C-A **
7989269-C-A 8121228-C-A **
8078783-A-C 8210742-A-C **
8078796-C-A 8210755-C-A **
8080718-T-C 8212677-T-C **
8153689-C-A 8285648-C-A **
8167864-C-A 8299823-C-A **
8333623-CCTACTTCTTCTTCTT-C 8465582-CCTACTTCTTCTTCTT-C **
9832438-C-A 9994829-C-A **
9942265-G-T 10104656-G-T **
7646700-C-A 7778659-C-A **
10787482-T-C **
10766566-G-TTC **
10766593-A-G **
10766598-A-T **
10771318-C-A **
10771560-A-C **
10775013-C-G **
10776866-C-T **
10777933-C-CTCCATTCCAT **
10787440-C-A **
10788334-C-T **
10763226-C-A **
10792872-G-T **
10793063-T-C **
10795856-C-T **
10798318-TTCC-T **
10798322-ATT-A **
10827790-C-A **
10828700-C-A **
10839884-T-TTTCAC **
10839900-T-C **
10845808-C-T **
10766562-C-CACT **
10763151-C-T **
9942353-G-T 10104744-G-T **
10004835-T-A 10167226-T-A **
9944776-C-A 10107167-C-A **
9946024-A-C 10108415-A-C **
9946032-A-G 10108423-A-G **
9946049-A-C 10108440-A-C **
9946100-T-A 10108491-T-A **
9965439-T-G 10127830-T-G **
9965479-A-C 10127870-A-C **
9968370-G-A 10130761-G-A **
9975178-T-C 10137569-T-C **
10004755-A-G 10167146-A-G **
10653075-C-A **
10759826-A-T **
10654376-C-A **
10654970-G-C **
10664100-A-C **
10673983-C-T **
10683112-C-A **
10691109-C-CTTCCA **
10693465-A-C **
10752819-C-T **
10753699-C-A **
10759785-C-T **
7649278-C-A 7781237-C-A **
7986195-G-T 8118154-G-T **
16576-T-C **
5910076-T-C 6042035-T-C **
6163574-T-TG 6295533-T-TG IR3_Dst **
6147478-C-G 6279437-C-G IR3_Dst **
6044676-G-T 6176635-G-T **
6816749-C-T 6948708-C-T **
6816761-G-T 6948720-G-T **
6831961-T-A 6963920-T-A **
5935377-G-A 6067336-G-A **
5910037-T-C 6041996-T-C **
6769845-G-A 6901804-G-A **
6881606-G-C 7013565-G-C **
6996761-C-G 7128720-C-G **
7009215-A-G 7141174-A-G **
7028626-G-A 7160585-G-A **
7039920-C-A 7171879-C-A **
7084453-C-A 7216412-C-A **
7166359-C-A 7298318-C-A **
6352708-A-C 6484667-A-C **
6773814-T-C 6905773-T-C **
6748002-GTGATGC-G 6879961-GTGATGC-G **
5872005-G-A 6003964-G-A **
6478652-G-C 6610611-G-C **
6366548-G-T 6498507-G-T **
6352596-T-G 6484555-T-G **
6384678-A-T 6516637-A-T **
6332321-G-T 6464280-G-T IR3_Dst **
6414229-G-T 6546188-G-T **
6473306-G-T 6605265-G-T **
6473404-G-T 6605363-G-T **
6281836-G-T 6413795-G-T IR3_Dst **
6281821-T-G 6413780-T-G IR3_Dst **
6202114-T-A 6334073-T-A IR3_Dst **
6592392-G-T 6724351-G-T **
6592413-G-T 6724372-G-T **
6631646-T-A 6763605-T-A **
6281809-G-T 6413768-G-T IR3_Dst **
6240992-A-AT 6372951-A-AT IR3_Dst **
6228197-G-GTGTGTT 6360156-G-GTGTGTT IR3_Dst 11×TA**
6713963-T-C 6845922-T-C **
6209010-G-A 6340969-G-A IR3_Dst **
7196505-G-T 7328464-G-T **
7166449-C-A 7298408-C-A **
6352723-G-C 6484682-G-C **
5318341-A-C 5450300-A-C **
5853478-T-G 5985437-T-G **
7397568-C-A 7529527-C-A **
5336047-C-A 5468006-C-A **
7401949-C-A 7533908-C-A **
7407305-A-C 7539264-A-C **
7407308-G-C 7539267-G-C **
5318350-A-C 5450309-A-C **
5313476-T-C 5445435-T-C **
5502254-C-A 5634213-C-A 16×A**
7413506-C-A 7545465-C-A **
7423978-C-A 7555937-C-A **
7425066-T-G 7557025-T-G **
7425067-G-T 7557026-G-T **
7430551-C-A 7562510-C-A **
7537652-C-A 7669611-C-A **
5305735-TA-T 5437694-TA-T **
7572957-A-C 7704916-A-C **
5502239-A-G 5634198-A-G **
7374406-G-T 7506365-G-T **
7336228-C-A 7468187-C-A **
5743184-A-C 5875143-A-C **
7196520-C-G 7328479-C-G **
7197601-A-T 7329560-A-T **
7200092-C-G 7332051-C-G **
7203693-A-T 7335652-A-T **
5520774-A-C 5652733-A-C **
5824228-A-G 5956187-A-G **
5743214-T-C 5875173-T-C **
7211241-C-G 7343200-C-G **
7259172-C-A 7391131-C-A **
5524852-A-T 5656811-A-T **
7277714-C-A 7409673-C-A **
7304592-G-T 7436551-G-T **
7286801-C-A 7418760-C-A **
5524876-A-T 5656835-A-T **
10948356-TATTCC-T ***
24415723-TA-T 22269576-TA-T ***
10664798-T-A ***
18804461-C-G 16692581-C-G ***
13462202-T-A 11306526-T-A ***
28514967-C-A 26368820-C-A ***
21972112-C-A 19810226-C-A ***
10687879-C-A ***
16768516-C-A 14656636-C-A ***
16469280-G-T 14357400-G-T ***
28605428-G-T 26459281-G-T ***
10968412-C-A ***
5174467-G-T 5306426-G-T ***
19271427-C-A 17159547-C-A ***
10772075-C-A ***
14470185-C-A 12349454-C-A ***
15276853-C-A 13164942-C-A ***
15230859-A-T 13118945-A-T ***
8528900-C-A 8660859-C-A 15×A***
18810898-G-T 16699018-G-T ***
2686419-G-A 2818378-G-A ***
9807986-C-A 9970377-C-A ***
8384611-G-T 8516570-G-T ***
10992984-C-T ***
8343782-C-A 8475741-C-A ***
14858556-C-A 12746622-C-A ***
9798229-AT-A 9960620-AT-A 8×T***
7359898-A-G 7491857-A-G ***
25096443-G-A 22950296-G-A g1 ***
7374499-G-T 7506458-G-T ***
21235217-G-A 19073331-G-A ***
14170849-T-G 12050143-T-G ***
19346768-G-T 17234888-G-T ***
14596116-G-T 12484316-G-T ***
19546210-T-C 17434330-T-C ***
2810388-TTG-T 2942347-TTG-T ***
14478883-C-A 12358152-C-A ***
8425692-A-T 8557651-A-T ***
22177708-C-A 20015822-C-A ***
22200379-G-A 20038493-G-A ***
9127529-G-T 9289920-G-T ***
3550571-ACTC-A,ACT 3682530-ACTC-A,ACT ***
13453344-C-CGGATG 11297668-C-CGGATG ***
6429502-C-A 6561461-C-A ***
17895196-TG-T 15783316-TG-T ***
56830041-T-A ***
13258997-C-A 11103321-C-A ***
56827224-TTACAC-T,TTACAT ***
15733071-C-A 13621191-C-A ***
18210292-A-T 16098412-A-T ***
23544882-C-T 21382996-C-T ***
13453633-C-T 11297957-C-T ***
22300822-C-A 20138936-C-A DYZ19 ***
13643796-C-A 11488120-C-A ***
10826901-T-C ***
13481360-ATCC-A 11325684-ATCC-A ***
23114041-AT-A 20952155-AT-A ***
13481400-G-C 11325724-G-C ***
23019926-G-T 20858040-G-T ***
22768851-A-T 20606965-A-T ***
6858685-C-T 6990644-C-T ***
22910469-C-A 20748583-C-A ***
13458725-C-G 11303049-C-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

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