Hall
BigY3: 460058, BigY2: 460058MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 460058 | BigY2 460058 |
---|---|---|---|---|---|---|---|---|---|
56832010-C-T | A* | ||||||||
13478497-C-A | 11322821-C-A | A* | |||||||
56833448-C-T | A* | ||||||||
6588269-G-GT | 6720228-G-GT | 10×T | A* | ||||||
28817178-A-C | 26671031-A-C | A* | |||||||
20743728-C-T | 18581842-C-T | P4_Prx | A* | A* | |||||
22303863-T-C | 20141977-T-C | DYZ19 | A* | A* | |||||
23176723-C-G | 21014837-C-G | Y | A* | A* | |||||
10835556-G-C | A* | ||||||||
13478427-G-T | 11322751-G-T | A* | |||||||
4042706-C-CT | 4174665-C-CT | 10×T | A* | ||||||
13844047-A-G | 11723341-A-G | A* | |||||||
23176116-C-A | 21014230-C-A | Y | A* | ||||||
56832635-A-C | A* | ||||||||
6233453-T-C | 6365412-T-C | IR3_Dst | A* | A* | |||||
21107035-T-G | 18945149-T-G | Y | A* | ||||||
9435100-T-A | 9597491-T-A | Y133271 | Y | Y | ** | + | |||
7163532-T-C | 7295491-T-C | Y | Y | + | ** | ||||
28593356-C-A | 26447209-C-A | + | |||||||
21356153-C-T | 19194267-C-T | Y133269 | Y | Y | + | + | |||
22476794-T-C | 20314908-T-C | BY223653 | DYZ19 | + | + | ||||
8776686-G-A | 8908645-G-A | ** | |||||||
13720644-G-T | 11564968-G-T | ** | |||||||
13895069-G-T | 11774363-G-T | ** | |||||||
13860001-GATGGA-G | 11739295-GATGGA-G | ** | |||||||
13854625-A-C | 11733919-A-C | ** | |||||||
11664977-A-C | ** | ||||||||
13725026-C-A | 11569350-C-A | ** | |||||||
13723378-A-G | 11567702-A-G | ** | |||||||
13722697-G-T | 11567021-G-T | ** | |||||||
13720649-G-C | 11564973-G-C | ** | |||||||
11023124-T-A | ** | ||||||||
8776684-A-T | 8908643-A-T | ** | |||||||
13720637-T-A | 11564961-T-A | ** | |||||||
13941114-C-A | 11820408-C-A | ** | |||||||
13453278-C-G | 11297602-C-G | ** | |||||||
13445954-A-C | 11290278-A-C | ** | |||||||
13412453-C-A | 11256777-C-A | ** | |||||||
8776679-G-A | 8908638-G-A | ** | |||||||
13263171-G-T | 11107495-G-T | ** | |||||||
13263139-C-A | 11107463-C-A | ** | |||||||
11034836-T-A | ** | ||||||||
11034753-C-A | ** | ||||||||
13602599-G-T | 11446923-G-T | ** | |||||||
14226435-C-A | 12105729-C-A | ** | |||||||
14147935-C-A | 12027229-C-A | ** | |||||||
15378456-C-T | 13266576-C-T | ** | |||||||
16028654-C-A | 13916774-C-A | ** | |||||||
15999911-T-G | 13888031-T-G | ** | |||||||
15931585-C-T | 13819705-C-T | Y51307 | ** | ||||||
15773812-G-T | 13661932-G-T | ** | |||||||
15712000-G-T | 13600120-G-T | ** | |||||||
15654902-T-C | 13543022-T-C | ** | |||||||
15647745-C-A | 13535865-C-A | ** | |||||||
15450186-T-A | 13338306-T-A | ** | |||||||
15412318-G-A | 13300438-G-A | ** | |||||||
15402745-T-G | 13290865-T-G | ** | |||||||
15378440-T-G | 13266560-T-G | ** | |||||||
14367930-A-T | 12247226-A-T | ** | |||||||
15376030-C-A | 13264150-C-A | ** | |||||||
15324195-AATT-A | 13212313-AATT-A | ** | |||||||
15126389-C-A | 13014476-C-A | ** | |||||||
14757377-C-A | 12645446-C-A | ** | |||||||
14753094-C-A | 12641163-C-A | ** | |||||||
14715299-C-A | 12603366-C-A | ** | |||||||
14714768-C-A | 12602835-C-A | ** | |||||||
14656536-C-A | 12544601-C-A | ** | |||||||
14610575-T-G | 12498777-T-G | ** | |||||||
14517483-A-T | 12405684-A-T | ** | |||||||
11021361-C-A | ** | ||||||||
11014308-A-T | ** | ||||||||
11015174-C-G | ** | ||||||||
9384550-A-C | 9546941-A-C | ** | |||||||
10833350-G-T | ** | ||||||||
10822383-C-A | ** | ||||||||
10814378-C-A | ** | ||||||||
9110194-C-A | ** | ||||||||
10797932-T-G | ** | ||||||||
10788258-A-C | ** | ||||||||
9110542-G-T | ** | ||||||||
10786282-G-T | ** | ||||||||
9039676-G-T | 9202067-G-T | ** | |||||||
10778674-C-A | ** | ||||||||
10778398-A-T | ** | ||||||||
10859107-T-C | ** | ||||||||
9426605-C-A | 9588996-C-A | ** | |||||||
10778397-A-T | ** | ||||||||
10761463-C-A | ** | ||||||||
10752592-T-C | ** | ||||||||
10686117-C-A | ** | ||||||||
10683452-C-A | ** | ||||||||
10669426-T-C | ** | ||||||||
10660126-C-T | ** | ||||||||
10028536-C-A | 10190927-C-A | ** | |||||||
10005933-C-A | 10168324-C-A | ** | |||||||
9832682-T-C | 9995073-T-C | ** | |||||||
10845638-T-A | ** | ||||||||
10865591-C-A | ** | ||||||||
9601704-G-A | 9764095-G-A | IR3_Prx | ** | ||||||
10993394-C-T | ** | ||||||||
8776696-C-T | 8908655-C-T | ** | |||||||
11012350-T-C | ** | ||||||||
11012329-A-T | ** | ||||||||
11012321-T-G | ** | ||||||||
11003920-T-C | ** | ||||||||
11001822-T-C | ** | ||||||||
16535893-C-A | 14424013-C-A | ** | |||||||
10997081-A-G | ** | ||||||||
8776697-A-G | 8908656-A-G | ** | |||||||
8776698-C-T | 8908657-C-T | ** | |||||||
10974884-C-G | ** | ||||||||
10876704-T-C | ** | ||||||||
10974526-T-C | ** | ||||||||
10959756-A-C | ** | ||||||||
10959732-C-T | ** | ||||||||
10959727-A-G | ** | ||||||||
10954573-A-T | ** | ||||||||
10943498-T-G | ** | ||||||||
10941825-A-T | ** | ||||||||
10935003-C-T | ** | ||||||||
10932954-C-G | ** | ||||||||
10906540-C-A | ** | ||||||||
10887183-C-A | ** | ||||||||
10997095-C-G | ** | ||||||||
17038586-A-G | 14926706-A-G | ** | |||||||
16667980-C-A | 14556100-C-A | ** | |||||||
26120225-C-A | 23974078-C-A | P1_Y1 | ** | ||||||
20689839-G-T | 18527953-G-T | P4_Prx | ** | ||||||
2790348-A-G | 2922307-A-G | ** | |||||||
36768-T-G | ** | ||||||||
56884423-T-TAATATAATATA | ** | ||||||||
56844161-C-A | ** | ||||||||
28560186-C-A | 26414039-C-A | ** | |||||||
28375887-C-A | 26229740-C-A | P1_gr2 | ** | ||||||
27714365-C-A | 25568218-C-A | P1_Y2 | ** | ||||||
27714364-T-C | 25568217-T-C | P1_Y2 | ** | ||||||
26167239-ATGTGTG-A | 24021092-ATGTGTG-A | P1_Y1 | ** | ||||||
24595279-G-T | 22449132-G-T | P3_t2 | ** | ||||||
10630819-A-ACGAGT | 5×CCATT | ** | |||||||
24422478-CA-C | 22276331-CA-C | 43×A | ** | ||||||
24280778-G-T | 22134631-G-T | P3_t1 | ** | ||||||
24280756-G-T | 22134609-G-T | P3_t1 | ** | ||||||
23952896-T-G | 21806749-T-G | ** | |||||||
23951944-G-T | 21805797-G-T | ** | |||||||
21752457-A-C | ** | ||||||||
23894474-T-C | 21732588-T-C | ** | |||||||
23475327-C-A | 21313441-C-A | ** | |||||||
23419509-T-G | 21257623-T-G | ** | |||||||
23340618-T-C | 21178732-T-C | ** | |||||||
23291354-G-T | 21129468-G-T | ** | |||||||
20389592-CT-C | 18227706-CT-C | P5_Dst | 15×T | ** | |||||
10630831-C-T | ** | ||||||||
22833687-C-A | 20671801-C-A | ** | |||||||
16322432-T-A | 14210552-T-A | ** | |||||||
26396472-A-G | 24250325-A-G | P1_Y1 | ** | ||||||
24276350-A-C | 22130203-A-C | P3_b1 | ** | ||||||
23651141-A-T | 21489255-A-T | ** | |||||||
23537551-A-T | 21375665-A-T | ** | |||||||
22696273-TA-T | 20534387-TA-T | ** | |||||||
22108393-G-C | 19946507-G-C | ** | |||||||
21600813-A-G | 19438927-A-G | ** | |||||||
17898523-A-G | 15786643-A-G | ** | |||||||
17849348-A-G | 15737468-A-G | ** | |||||||
17728413-A-G | 15616533-A-G | ** | |||||||
16319650-C-T | 14207770-C-T | ** | |||||||
2772234-C-T | 2904193-C-T | ** | |||||||
16290714-G-T | 14178834-G-T | ** | |||||||
8056177-C-T | 8188136-C-T | ** | |||||||
7349038-TG-T | 7480997-TG-T | ** | |||||||
7135207-G-T | 7267166-G-T | ** | |||||||
6637079-G-C | 6769038-G-C | ** | |||||||
5903011-C-T | 6034970-C-T | ** | |||||||
5383032-T-A | 5514991-T-A | ** | |||||||
5135411-ATTT-A | 5267370-ATTT-A | 8×T | ** | ||||||
4744606-A-G | 4876565-A-G | ** | |||||||
2790362-T-C | 2922321-T-C | ** | |||||||
2790353-A-G | 2922312-A-G | ** | |||||||
22916983-C-A | 20755097-C-A | ** | |||||||
22601950-C-A | 20440064-C-A | ** | |||||||
16673149-C-A | 14561269-C-A | ** | |||||||
17467006-C-A | 15355126-C-A | ** | |||||||
18527815-G-T | 16415935-G-T | P6_Dst | ** | ||||||
18422774-C-A | 16310894-C-A | P6_Gap | ** | ||||||
18305906-A-C | 16194026-A-C | P6_Prx | ** | ||||||
18192553-G-T | 16080673-G-T | ** | |||||||
18190181-C-A | 16078301-C-A | ** | |||||||
18059886-C-A | 15948006-C-A | ** | |||||||
18053424-C-A | 15941544-C-A | ** | |||||||
17890635-C-A | 15778755-C-A | ** | |||||||
17860643-C-A | 15748763-C-A | ** | |||||||
17740062-A-C | 15628182-A-C | ** | |||||||
17466995-A-C | 15355115-A-C | ** | |||||||
18852762-T-A | 16740882-T-A | ** | |||||||
17382469-A-C | 15270589-A-C | ** | |||||||
17355553-G-A | 15243673-G-A | ** | |||||||
17260926-C-A | 15149046-C-A | ** | |||||||
17257427-G-T | 15145547-G-T | ** | |||||||
17128507-G-A | 15016627-G-A | ** | |||||||
8093396-T-G | 8225355-T-G | ** | |||||||
16831202-C-A | 14719322-C-A | ** | |||||||
16831166-C-A | 14719286-C-A | ** | |||||||
16725639-G-T | 14613759-G-T | ** | |||||||
16706411-G-T | 14594531-G-T | FT37142 | ** | ||||||
16701642-C-A | 14589762-C-A | FTB81896 | ** | ||||||
18707230-C-A | 16595350-C-A | ** | |||||||
18880152-C-A | 16768272-C-A | ** | |||||||
22590471-C-A | 20428585-C-A | Y109211 | ** | ||||||
20473621-A-T | 18311735-A-T | P5_Dst | ** | ||||||
22537817-G-T | 20375931-G-T | ** | |||||||
22527167-C-A | 20365281-C-A | ** | |||||||
22513204-G-GTT | 20351318-G-GTT | 9×T | ** | ||||||
22175876-G-T | 20013990-G-T | ** | |||||||
22169711-G-T | 20007825-G-T | ** | |||||||
21340283-A-C | 19178397-A-C | ** | |||||||
20840352-C-A | 18678466-C-A | P4_Gap | ** | ||||||
20692874-T-A | 18530988-T-A | P4_Prx | ** | ||||||
20678047-C-A | 18516161-C-A | P4_Prx | ** | ||||||
20677948-T-G | 18516062-T-G | P4_Prx | ** | ||||||
20557643-G-T | 18395757-G-T | P5_Dst | ** | ||||||
20473620-G-A | 18311734-G-A | P5_Dst | ** | ||||||
18890664-A-G | 16778784-A-G | ** | |||||||
20473605-ATAG-A | 18311719-ATAG-A | P5_Dst | ** | ||||||
20473596-A-G | 18311710-A-G | P5_Dst | ** | ||||||
19887308-AC-A | 17775428-AC-A | P5_Prx | ** | ||||||
19733304-T-G | 17621424-T-G | P5_Prx | ** | ||||||
19677668-T-A | 17565788-T-A | P5_Prx | ** | ||||||
19303695-C-A | 17191815-C-A | ** | |||||||
19303372-G-T | 17191492-G-T | ** | |||||||
19228920-C-A | 17117040-C-A | ** | |||||||
19125318-C-A | 17013438-C-A | ** | |||||||
19113772-C-A | 17001892-C-A | ** | |||||||
18931838-C-A | 16819958-C-A | ** | |||||||
8213545-C-A | 8345504-C-A | ** | |||||||
13456256-T-A | 11300580-T-A | ** | |||||||
8070000-C-A | 8201959-C-A | ** | |||||||
10804813-T-G | ** | ||||||||
9941347-C-A | 10103738-C-A | ** | |||||||
19599103-A-C | 17487223-A-C | P5_Prx | ** | ||||||
10895856-C-T | ** | ||||||||
7040893-G-T | 7172852-G-T | ** | |||||||
15770404-G-GTA | 13658524-G-GTA | ** | |||||||
20473623-GA-G | 18311737-GA-G | P5_Dst | ** | ||||||
10761197-G-T | ** | ||||||||
9995983-C-A | 10158374-C-A | ** | |||||||
17703236-TAAAAA-T | 15591356-TAAAAA-T | 22×A | ** | ||||||
10804818-T-G | ** | ||||||||
10804808-T-G | ** | ||||||||
17244408-G-T | 15132528-G-T | ** | |||||||
10859584-G-T | ** | ||||||||
8776676-T-C | 8908635-T-C | ** | |||||||
14528426-C-A | 12416627-C-A | ** | |||||||
21700493-C-A | 19538607-C-A | ** | |||||||
10997100-C-T | ** | ||||||||
8856846-C-A | 8988805-C-A | ** | |||||||
10813026-C-G | ** | ||||||||
16952927-C-A | 14841047-C-A | ** | |||||||
13803172-C-A | 11682466-C-A | ** | |||||||
9880721-C-A | 10043112-C-A | ** | |||||||
10981295-C-A | ** | ||||||||
22459846-C-A | 20297960-C-A | BY220407 | DYZ19 | ** | |||||
7231214-C-A | 7363173-C-A | ** | |||||||
19677714-G-A | 17565834-G-A | P5_Prx | ** | ||||||
11649095-C-A | ** | ||||||||
10685782-A-T | ** | ||||||||
10057483-C-A | 10219874-C-A | ** | |||||||
10925371-T-C | ** | ||||||||
14495806-C-A | 12384003-C-A | ** | |||||||
21512450-C-A | 19350564-C-A | ** | |||||||
13267802-T-C | 11112126-T-C | ** | |||||||
6693370-C-A | 6825329-C-A | ** | |||||||
16170335-A-T | 14058455-A-T | ** | |||||||
7142198-C-A | 7274157-C-A | ** | |||||||
21658555-C-A | 19496669-C-A | ** | |||||||
10893942-ATTCCATTCTC-A | ** | ||||||||
13720599-T-G | 11564923-T-G | ** | |||||||
16598905-C-A | 14487025-C-A | ** | |||||||
23081964-T-G | 20920078-T-G | ** | |||||||
10655896-T-C | ** | ||||||||
13850156-C-A | 11729450-C-A | ** | |||||||
13255304-C-A | 11099628-C-A | ** | |||||||
11012356-T-A | ** | ||||||||
3286329-C-A | 3418288-C-A | ** | |||||||
14701068-C-A | 12589134-C-A | ** | |||||||
13936411-C-A | 11815705-C-A | ** | |||||||
8035990-C-T | 8167949-C-T | ** | |||||||
5727880-C-A | 5859839-C-A | ** | |||||||
13898729-G-T | 11778023-G-T | ** | |||||||
13717517-T-A | 11561841-T-A | ** | |||||||
10804779-C-A | ** | ||||||||
10998049-C-A | ** | ||||||||
17703255-A-G | 15591375-A-G | BY25136 | 6×AAAG | ** | |||||
10783400-C-A | ** | ||||||||
15178001-C-A | 13066087-C-A | ** | |||||||
10925063-C-T | ** | ||||||||
13313610-C-A | 11157934-C-A | ** | |||||||
17842307-C-A | 15730427-C-A | ** | |||||||
7164222-T-C | 7296181-T-C | ** | |||||||
13723358-T-C | 11567682-T-C | ** | |||||||
13720593-C-A | 11564917-C-A | ** | |||||||
13579655-A-G | 11423979-A-G | ** | |||||||
14871098-AT-A | 12759168-AT-A | ** | |||||||
13263170-A-T | 11107494-A-T | ** | |||||||
10925519-C-T | ** | ||||||||
19126478-G-T | 17014598-G-T | BY3516 | BY4656 Y20786 A10978 | ** | |||||
22459843-G-A | 20297957-G-A | A4308 | DYZ19 | ** | |||||
9383169-C-A | 9545560-C-A | ** | |||||||
13564629-C-A | 11408953-C-A | Z26066 | ** | ||||||
22242058-T-G | 20080172-T-G | BY25098 | DYZ19 | ** | |||||
22768839-TG-T | 20606953-TG-T | ** | |||||||
17432010-CTT-C | 15320130-CTT-C | 21×T | ** | ||||||
14428121-GGTA-G | 12307396-GGTA-G | 6×GTA | ** | ||||||
10024269-T-TCTCC | 10186660-T-TCTCC | ** | |||||||
13722689-A-T | 11567013-A-T | ** | |||||||
13811052-T-A | 11690346-T-A | ** | |||||||
22340058-G-T | 20178172-G-T | DYZ19 | ** | ||||||
10925569-A-C | ** | ||||||||
7573094-G-A | 7705053-G-A | ** | |||||||
9063679-C-A | 9226070-C-A | ** | |||||||
2824429-C-A | 2956388-C-A | ** | |||||||
10813022-T-G | ** | ||||||||
10895818-T-A | ** | ||||||||
10959794-G-C | ** | ||||||||
10959762-G-C | ** | ||||||||
10798343-T-TTCTTC | ** | ||||||||
10798332-A-ATTCT | ** | ||||||||
10798331-C-CT | ** | ||||||||
13299149-C-A | 11143473-C-A | ** | |||||||
10997085-G-C | ** | ||||||||
26099756-A-T | 23953609-A-T | P1_Y1 | ** | ||||||
16507118-C-A | 14395238-C-A | ** | |||||||
16629335-C-A | 14517455-C-A | 19×A | ** | ||||||
15986582-C-A | 13874702-C-A | ** | |||||||
15606863-C-A | 13494983-C-A | ** | |||||||
28656955-C-A | 26510808-C-A | ** | |||||||
13859843-AGGAAT-A | 11739137-AGGAAT-A | 5×GGAAT | ** | ||||||
11015160-C-T | ** | ||||||||
11015132-G-T | ** | ||||||||
15695791-C-A | 13583911-C-A | ** | |||||||
22776970-C-A | 20615084-C-A | ** | |||||||
18071474-C-A | 15959594-C-A | ** | |||||||
10895808-T-A | ** | ||||||||
10655872-ACCATCCCAAT-A | ** | ||||||||
14588984-G-T | 12477184-G-T | ** | |||||||
15191199-C-A | 13079285-C-A | ** | |||||||
10655895-G-A | ** | ||||||||
21597056-C-A | 19435170-C-A | ** | |||||||
4055950-C-A | 4187909-C-A | ** | |||||||
3876151-A-G | 4008110-A-G | ** | |||||||
3836863-C-A | 3968822-C-A | ** | |||||||
3836857-G-T | 3968816-G-T | ** | |||||||
15410460-C-A | 13298580-C-A | ** | |||||||
3324025-C-A | 3455984-C-A | ** | |||||||
3131693-T-G | 3263652-T-G | ** | |||||||
3128141-C-A | 3260100-C-A | ** | |||||||
2730043-T-G | 2862002-T-G | ** | |||||||
10677919-G-T | ** | ||||||||
4777081-C-A | 4909040-C-A | ** | |||||||
10678461-C-A | ** | ||||||||
4070855-C-A | 4202814-C-A | ** | |||||||
7127366-C-A | 7259325-C-A | ** | |||||||
28803971-T-G | 26657824-T-G | ** | |||||||
15450188-T-C | 13338308-T-C | ** | |||||||
13294186-C-A | 11138510-C-A | ** | |||||||
5927436-G-T | 6059395-G-T | ** | |||||||
10685789-T-C | ** | ||||||||
19537899-C-A | 17426019-C-A | ** | |||||||
4208470-A-G | 4340429-A-G | ** | |||||||
5107587-C-A | 5239546-C-A | ** | |||||||
5635199-G-T | 5767158-G-T | ** | |||||||
6827850-C-A | 6959809-C-A | ** | |||||||
7768704-T-C | 7900663-T-C | ** | |||||||
7753086-C-G | 7885045-C-G | ** | |||||||
7428388-C-A | 7560347-C-A | ** | |||||||
7391176-G-A | 7523135-G-A | ** | |||||||
7334193-A-C | 7466152-A-C | ** | |||||||
7256986-G-A | 7388945-G-A | ** | |||||||
7098054-A-C | 7230013-A-C | ** | |||||||
7021858-G-A | 7153817-G-A | ** | |||||||
6918492-C-A | 7050451-C-A | ** | |||||||
6765620-C-G | 6897579-C-G | ** | |||||||
5220461-C-A | 5352420-C-A | ** | |||||||
6700874-G-A | 6832833-G-A | ** | |||||||
6268866-CACA-C | 6400825-CACA-C | IR3_Dst | ** | ||||||
6262641-C-CAT | 6394600-C-CAT | IR3_Dst | ** | ||||||
6144845-C-A | 6276804-C-A | IR3_Dst | ** | ||||||
6010351-C-A | 6142310-C-A | ** | |||||||
6001503-T-G | 6133462-T-G | ** | |||||||
5949090-A-C | 6081049-A-C | ** | |||||||
5625483-G-T | 5757442-G-T | ** | |||||||
5586753-A-C | 5718712-A-C | ** | |||||||
5252091-T-A | 5384050-T-A | ** | |||||||
23855829-C-A | 21693943-C-A | ** | |||||||
3420953-G-T | 3552912-G-T | ** | |||||||
10678086-C-A | ** | ||||||||
16244972-C-A | 14133092-C-A | ** | |||||||
3467223-C-A | 3599182-C-A | ** | |||||||
28535500-A-G | 26389353-A-G | ** | |||||||
10895775-C-CCACTT | ** | ||||||||
10895773-T-G | ** | ||||||||
16889708-C-A | 14777828-C-A | ** | |||||||
14585996-G-T | 12474196-G-T | ** | |||||||
5393424-C-A | 5525383-C-A | ** | |||||||
10895840-C-CTACTG | ** | ||||||||
7621896-C-A | 7753855-C-A | ** | |||||||
5200651-GT-G | 5332610-GT-G | ** | |||||||
10001058-C-CT | 10163449-C-CT | 16×T | ** | ||||||
11668367-C-A | ** | ||||||||
10895845-C-T | ** | ||||||||
10658567-C-G | ** | ||||||||
7013547-C-A | 7145506-C-A | ** | |||||||
10895827-A-C | ** | ||||||||
11023127-T-A | ** | ||||||||
22730607-C-A | 20568721-C-A | ** | |||||||
13543685-C-A | 11388009-C-A | ** | |||||||
10906180-AC-A | ** | ||||||||
10797902-T-C | ** | ||||||||
15176912-C-A | 13064998-C-A | ** | |||||||
10906170-G-C | ** | ||||||||
8980521-C-A | 9142912-C-A | ** | |||||||
2888941-T-C | 3020900-T-C | *** | |||||||
2979296-CTTT-C,CT | 3111255-CTTT-C,CT | 15×T | *** | ||||||
8751076-GTATA-G,GTA | 8883035-GTATA-G,GTA | 10×TA | *** | ||||||
9013257-CAAAA-C,CAAA | 9175648-CAAAA-C,CAAA | 18×A | *** | ||||||
6765554-C-A | 6897513-C-A | *** | |||||||
6694444-CTTT-C,CTT | 6826403-CTTT-C,CTT | 20×T | *** | ||||||
16227897-AGAAG-A | 14116017-AGAAG-A | 8×GAAG | *** | ||||||
8704030-CTT-C,CT | 8835989-CTT-C,CT | 13×T | *** | ||||||
8224167-TAAATAAATAAATAAATAAATAAATA-T | 8356126-TAAATAAATAAATAAATAAATAAATA-T | *** | |||||||
9702910-G-T | 9865301-G-T | IR3_Prx | *** | ||||||
4323098-A-G | 4455057-A-G | *** | |||||||
9877148-T-TTG | 10039539-T-TTG | *** | |||||||
24492392-A-G | 22346245-A-G | *** | |||||||
10019891-A-T | 10182282-A-T | *** | |||||||
6792628-CAA-C,CAAA | 6924587-CAA-C,CAAA | 18×A | *** | ||||||
17414908-CAAA-C,CAA | 15303028-CAAA-C,CAA | 18×A | *** | ||||||
4530027-A-G | 4661986-A-G | *** | |||||||
4414263-G-T | 4546222-G-T | *** | |||||||
15183238-C-A | 13071324-C-A | *** | |||||||
7188795-A-C | 7320754-A-C | *** | |||||||
13453150-AT-AG,TT | 11297474-AT-AG,TT | *** | |||||||
17027309-G-A | 14915429-G-A | *** | |||||||
18615965-G-T | 16504085-G-T | *** | |||||||
13460463-T-A | 11304787-T-A | *** | |||||||
22023444-T-C | 19861558-T-C | *** | |||||||
20420895-G-T | 18259009-G-T | P5_Dst | *** | ||||||
17826214-C-A | 15714334-C-A | *** | |||||||
15776621-C-A | 13664741-C-A | *** | |||||||
17338277-C-A | 15226397-C-A | *** | |||||||
17338254-T-A | 15226374-T-A | *** | |||||||
17027318-G-A | 14915438-G-A | *** | |||||||
16383205-G-A | 14271325-G-A | *** | |||||||
56833188-TTCCACTCTACTTCTC-T,TTCCACTATACTCCAC | *** | ||||||||
7768525-G-T | 7900484-G-T | *** | |||||||
23006620-T-A | 20844734-T-A | *** | |||||||
6693904-C-T | 6825863-C-T | *** | |||||||
15892133-A-G | 13780253-A-G | *** | |||||||
15842639-G-A | 13730759-G-A | FT180511 | *** | ||||||
23313201-C-T | 21151315-C-T | *** | |||||||
14421449-C-T | 12300724-C-T | *** | |||||||
8001103-CAGAATTTTATGTA-C | 8133062-CAGAATTTTATGTA-C | *** | |||||||
14219346-TA-T | 12098640-TA-T | *** | |||||||
13492722-T-C | 11337046-T-C | *** | |||||||
2678416-C-T | 2810375-C-T | *** | |||||||
13453261-T-G | 11297585-T-G | *** | |||||||
9136669-TTATATA-T | 9299060-TTATATA-T | Z17685 | 11×TA | *** | |||||
18832820-C-A | 16720940-C-A | *** | |||||||
3051711-C-A | 3183670-C-A | *** | |||||||
2912779-G-A | 3044738-G-A | FT412175 | *** | ||||||
22833607-C-A | 20671721-C-A | *** | |||||||
22737231-CAAAAA-C,CAAAAAA | 20575345-CAAAAA-C,CAAAAAA | 18×A | *** | ||||||
22696627-A-G | 20534741-A-G | *** | |||||||
2834869-CTTT-C,CT | 2966828-CTTT-C,CT | 15×T | *** | ||||||
2803884-A-G | 2935843-A-G | *** | |||||||
15430399-C-A | 13318519-C-A | *** | |||||||
2750784-G-A | 2882743-G-A | *** | |||||||
15270877-TAAA-T | 13158966-TAAA-T | 13×A | *** | ||||||
21888837-A-G | 19726951-A-G | *** | |||||||
13846604-G-T | 11725898-G-T | *** | |||||||
21732688-C-A | 19570802-C-A | *** | |||||||
21550038-C-A | 19388152-C-A | *** | |||||||
21443976-A-G | 19282090-A-G | *** | |||||||
56837008-CTGCACTCCACTCAAT-C,CTCCACTCCACTACACTCAAT | *** | ||||||||
21172739-C-A | 19010853-C-A | *** | |||||||
28773685-C-A | 26627538-C-A | *** | |||||||
19044119-C-A | 16932239-C-A | *** | |||||||
14696075-T-TA | 12584141-T-TA | 9×A | *** | ||||||
19508177-CTTTTT-C,CTTTTTT | 17396297-CTTTTT-C,CTTTTTT | 19×T | *** | ||||||
18738153-C-A | 16626273-C-A | *** | |||||||
20778667-CAT-C,CATAT | 18616781-CAT-C,CATAT | P4_Prx | 9×AT | *** | |||||
23146141-C-A | 20984255-C-A | *** | |||||||
18384062-C-A | 16272182-C-A | P6_Gap | *** | ||||||
5539254-G-GTT | 5671213-G-GTT | 13×T | *** | ||||||
13288764-C-A | 11133088-C-A | *** | |||||||
6513744-A-G | 6645703-A-G | FT104320 | *** | ||||||
6402445-G-A | 6534404-G-A | *** | |||||||
21371272-C-CTT | 19209386-C-CTT | 10×T | *** | ||||||
6402440-C-A | 6534399-C-A | *** | |||||||
15281169-TA-T | 13169268-TA-T | 8×A | *** | ||||||
13453260-A-T | 11297584-A-T | *** | |||||||
22804535-C-CAA | 20642649-C-CAA | 12×A | *** | ||||||
17338272-T-C | 15226392-T-C | *** | |||||||
23002319-CTTTT-C | 20840433-CTTTT-C | 14×T | *** | ||||||
15001299-A-AT | 12889384-A-AT | 9×T | *** | ||||||
5842223-C-A | 5974182-C-A | *** | |||||||
13456334-C-A | 11300658-C-A | *** | |||||||
10807209-T-A,TA | *** | ||||||||
10828853-C-CATAGA | *** | ||||||||
14143219-C-A | 12022513-C-A | *** | |||||||
24869554-G-T | 22723407-G-T | IR1_R | *** | ||||||
15976512-C-A | 13864632-C-A | *** | |||||||
4995847-C-CT | 5127806-C-CT | 8×T | *** | ||||||
24362424-G-A | 22216277-G-A | *** | |||||||
17863574-A-AT | 15751694-A-AT | 8×T | *** | ||||||
4408509-C-A | 4540468-C-A | *** | |||||||
19143125-ATT-A,AT | 17031245-ATT-A,AT | 17×T | *** | ||||||
13453306-T-G | 11297630-T-G | *** | |||||||
13370136-G-T | 11214460-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 460058 | 9301942 | 7644141 | 7566721 |
Kit: 460058 | 14911426 | 9390065 | 8219347 |
Used in age calculations | 14911426 | 9390065 | 8219347 |
Counts of SNPs | 6 | 3 |
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