Tate

BigY2: 397522
MDKA Birth: England

Tree Position

R-M269 > L23 > L51 > Z2118 > ~18571755-G-A > S1161 > S1141 > A613 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
397522
19616791-G-A 17504911-G-A P5_Prx YA*
58975697-C-T 56829550-C-T A*
24338278-C-T 22192131-C-T P3_t1 A*
6250837-C-T 6382796-C-T IR3_Dst A*
25892666-T-C 23746519-T-C P1_Y1 A*
20741137-T-G 18579251-T-G P4_Prx A*
19686854-G-A 17574974-G-A P5_Prx A*
18315813-C-T 16203933-C-T P6_Prx A*
56829547-T-G A*
22312959-G-T 20151073-G-T DYZ19 A*
6139234-T-C 6271193-T-C IR3_Dst A*
13687048-G-A 11531372-G-A A*
15269752-T-C 13157841-T-C BY14215 YY+
14904708-G-T 12792775-G-T BY98383 YY+
14243907-C-T 12123201-C-T BY94261 YY+
13851-G-A +
14252936-G-A 12132230-G-A BY14213 YY+
14484621-C-T 12363890-C-T BY96056 YY+
16788183-G-A 14676303-G-A M11387 YY+
17638126-A-C 15526246-A-C Z24388 FGC20226 YY+
23452048-G-T 21290162-G-T BY14218 YY+
23136369-C-G 20974483-C-G BY143267 YY+
23135808-T-G 20973922-T-G BY143263 YY+
23121603-C-A 20959717-C-A BY143116 YY+
6913043-T-A 7045002-T-A BY62162 YY+
22241907-G-A 20080021-G-A BY214006 DYZ19 +
22241903-A-C 20080017-A-C BY45767 DYZ19 +
22241902-T-A 20080016-T-A BY214004 DYZ19 +
22075630-A-G 19913744-A-G BY137462 YY+
7959128-G-A 8091087-G-A BY69066 YY+
16292267-A-G 14180387-A-G BY14216 YY+
13210154-C-T 11054478-C-T BY84433 +
16413291-T-C 14301411-T-C BY107620 YY+
14805433-G-A 12693504-G-A BY14214 ZS11116 YY+
19127494-C-T 17015614-C-T BY126544 YY+
13866719-G-A 11746013-G-A BY47730 +
9759002-A-C 9921393-A-C BY14212 Y+
19217531-C-T 17105651-C-T BY14217 YY+
14509194-C-T 12397399-C-T BY54647 YY+
8624742-G-A 8756701-G-A BY14210 YY+
21180512-G-A 19018626-G-A BY130919 YY+
8643711-C-T 8775670-C-T BY14211 YY+
13449197-GAAATC-G,GAACTC 11293521-GAAATC-G,GAACTC *
22345330-A-C 20183444-A-C DYZ19 *
8470541-T-C 8602500-T-C YY*
22509005-G-T 20347119-G-T BY182199 DYZ19 *
22317390-C-T 20155504-C-T DYZ19 *
22288313-C-A 20126427-C-A DYZ19 *
14102296-T-C 11981590-T-C YY*
19372284-TGATA-T 17260404-TGATA-T 11×GATA*
13488874-C-G 11333198-C-G *
19397160-GAGAT-G 17285280-GAGAT-G 7×AGAT*
10885752-T-C **
10864793-T-C **
10865166-C-A **
10865247-CT-C **
10870154-C-G **
10870158-A-G **
10872472-A-C **
10885736-T-A **
10885740-C-A **
10885741-A-G **
5982360-G-T 6114319-G-T **
10847871-C-A **
10885757-A-C **
10885761-T-A **
4114865-T-A 4246824-T-A **
4114863-T-A 4246822-T-A **
4114855-A-G 4246814-A-G **
10885772-T-C **
10885783-TC-T **
10894703-C-A **
10899135-C-A **
10929478-G-T **
10931869-C-T **
10944166-A-T **
10885754-T-C **
10831356-A-C **
10845930-C-A **
10771798-G-A **
10662193-A-C **
4215874-G-T 4347833-G-T **
10668686-CACTCT-C **
10678736-G-A **
10682731-C-A **
10689405-A-G FT91582 **
10689490-T-G **
10744600-A-C **
10745155-C-T **
10750094-C-A **
10760738-C-A **
10772855-A-G **
10953807-C-G FTB39210 **
10776305-C-A **
10783883-C-A **
10784845-G-C **
10784856-G-C **
10801635-T-C **
10802165-C-T **
10817794-A-G **
10820628-C-A **
10822361-C-T **
10826509-ACCCC-A **
10826628-C-A **
10948088-C-A **
10976154-C-T **
10973075-C-A **
13849980-T-C 11729274-T-C FTA48311 **
13598663-C-A 11442987-C-A **
13643866-T-C 11488190-T-C **
4069595-A-G 4201554-A-G **
4017123-G-A 4149082-G-A **
13706697-C-G 11551021-C-G FT449232 **
13708956-A-G 11553280-A-G **
13722607-GGACAC-G 11566931-GGACAC-G **
13722620-A-G 11566944-A-G **
13722636-A-T 11566960-A-T **
11644788-T-C **
13850085-T-C 11729379-T-C **
13545148-C-A 11389472-C-A **
13856854-A-C 11736148-A-C **
13859848-T-A 11739142-T-A **
13935223-T-A 11814517-T-A **
13960322-C-A 11839616-C-A **
13960542-C-A 11839836-C-A **
13975883-T-C 11855177-T-C **
4005463-G-T 4137422-G-T **
4002477-T-A 4134436-T-A **
14000531-C-A 11879825-C-A FT163136 **
14022017-T-A 11901311-T-A **
14052106-C-A 11931400-C-A **
13594813-G-T 11439137-G-T **
13505155-C-A 11349479-C-A **
10973486-T-G **
11010105-G-A **
10657213-T-C **
10981556-C-A **
10981559-A-T **
10981565-G-C **
10981592-A-G **
10981603-A-T **
10981615-A-G **
10987542-TC-T **
10988578-T-C **
11005410-C-G FTB39211 **
4114852-A-G 4246811-A-G **
11011651-C-A **
13252740-C-A 11097064-C-A **
11018290-C-T FT393830 **
11018291-A-C **
11020245-T-A **
11027732-C-A **
11027840-A-C **
11031186-C-A **
11032878-T-G **
13197910-A-G 11042234-A-G **
4114837-A-AT 4246796-A-AT **
4094954-C-A 4226913-C-A **
13226730-TG-T 11071054-TG-T **
10661604-C-T **
10072159-G-T 10234550-G-T **
10654955-T-C **
7135477-C-A 7267436-C-A **
6790462-G-A 6922421-G-A **
5569793-C-A 5701752-C-A **
6827827-G-A 6959786-G-A **
6829932-C-A 6961891-C-A **
5551050-C-A 5683009-C-A **
7033366-C-T 7165325-C-T **
7033572-A-G 7165531-A-G **
7033575-A-G 7165534-A-G **
7045451-C-A 7177410-C-A **
7103496-C-A 7235455-C-A **
7158974-C-A 7290933-C-A **
5587274-G-T 5719233-G-T **
5489545-T-C 5621504-T-C **
7166588-A-T 7298547-A-T **
7180024-A-C 7311983-A-C **
5426382-CTT-C 5558341-CTT-C **
7180067-A-T 7312026-A-T **
7183108-T-C 7315067-T-C **
5264393-C-T 5396352-C-T **
5191426-T-C 5323385-T-C **
5127737-C-A 5259696-C-A **
5127636-A-T 5259595-A-T **
7196260-G-T 7328219-G-T **
6776366-G-A 6908325-G-A **
5648296-G-T 5780255-G-T **
7303786-C-A 7435745-C-A Y61866 **
5698961-G-T 5830920-G-T **
5995895-C-A 6127854-C-A **
6083001-G-T 6214960-G-T **
5982337-G-T 6114296-G-T **
5799946-G-A 5931905-G-A **
5755213-C-T 5887172-C-T **
6247989-C-CAT 6379948-C-CAT IR3_Dst **
6248072-C-G 6380031-C-G IR3_Dst **
5715389-T-C 5847348-T-C **
6278567-C-T 6410526-C-T IR3_Dst **
6357990-A-T 6489949-A-T **
6359133-T-C 6491092-T-C **
6380814-A-T 6512773-A-T **
6748076-T-C 6880035-T-C **
5683929-G-T 5815888-G-T **
5670525-C-A 5802484-C-A **
6444968-A-C 6576927-A-C **
6475294-G-T 6607253-G-T **
6582859-A-G 6714818-A-G **
6606502-G-A 6738461-G-A **
6641296-G-A 6773255-G-A **
6692826-T-A 6824785-T-A **
6692851-T-C 6824810-T-C **
6694274-T-C 6826233-T-C **
6694797-A-G 6826756-A-G **
7277670-A-G 7409629-A-G **
7392276-C-A 7524235-C-A **
5988925-C-A 6120884-C-A FT184744 **
4425419-T-A 4557378-T-A **
9108795-T-A **
8977049-G-T 9139440-G-T **
9076040-C-A 9238431-C-A **
9377521-C-T 9539912-C-T **
9381080-C-T 9543471-C-T **
4435310-TTGCTA-T 4567269-TTGCTA-T **
9416846-C-A 9579237-C-A **
9511827-A-T 9674218-A-T **
9537705-TGTG-T 9700096-TGTG-T IR3_Prx **
9602674-A-G 9765065-A-G IR3_Prx **
9934232-T-A 10096623-T-A **
4630703-G-T 4762662-G-T **
4357450-C-A 4489409-C-A **
9934259-C-G 10096650-C-G **
4228048-G-T 4360007-G-T **
9934265-T-G 10096656-T-G **
9954752-T-C 10117143-T-C **
9968286-A-G 10130677-A-G **
9976117-C-A 10138508-C-A **
10005991-C-A 10168382-C-A FTB39209 **
10018212-C-A 10180603-C-A **
10037815-G-T 10200206-G-T **
10051409-G-T 10213800-G-T **
14068434-G-T 11947728-G-T **
9108789-T-C **
5073739-T-A 5205698-T-A **
4944002-A-G 5075961-A-G **
7519037-G-A 7650996-G-A **
7708880-A-C 7840839-A-C **
7753096-A-T 7885055-A-T **
7753107-G-A 7885066-G-A **
7758280-C-A 7890239-C-A **
4976967-T-A 5108926-T-A **
7996829-G-A 8128788-G-A **
8072261-T-A 8204220-T-A **
8076218-T-A 8208177-T-A **
8213953-G-A 8345912-G-A **
8214006-A-G 8345965-A-G **
8253579-C-A 8385538-C-A **
9108788-G-T **
8269649-A-T 8401608-A-T **
8481435-AT-A 8613394-AT-A **
4880709-G-T 5012668-G-T FT417435 22×T**
4804546-A-G 4936505-A-G **
8649795-A-G 8781754-A-G **
8671888-T-G 8803847-T-G **
8728184-G-C 8860143-G-C **
4754470-C-A 4886429-C-A **
8901377-T-A 9033336-T-A **
9108379-G-A **
9108447-T-G **
4261871-C-T 4393830-C-T **
14488321-G-A 12367590-G-A **
14069921-C-A 11949215-C-A **
22520635-G-A 20358749-G-A **
22091287-G-A 19929401-G-A **
22176727-C-A 20014841-C-A **
22189227-T-G 20027341-T-G **
22207296-C-A 20045410-C-A **
22301209-G-T 20139323-G-T DYZ19 **
22307274-A-T 20145388-A-T DYZ19 **
22340069-C-T 20178183-C-T DYZ19 **
22490277-T-C 20328391-T-C DYZ19 **
22520605-G-C 20358719-G-C **
22520615-C-G 20358729-C-G **
22520624-TA-T 20358738-TA-T **
22659433-A-T 20497547-A-T **
21910281-T-C 19748395-T-C **
22732869-T-A 20570983-T-A **
22811905-C-A 20650019-C-A **
23037225-A-T 20875339-A-T **
23039661-C-A 20877775-C-A **
23066889-C-A 20905003-C-A **
23126599-C-A 20964713-C-A **
23128798-A-G 20966912-A-G FT112243 **
23177645-T-A 21015759-T-A **
23177659-A-G 21015773-A-G **
23177673-C-G 21015787-C-G **
23198826-C-A 21036940-C-A **
22000018-G-T 19838132-G-T **
21785951-A-C 19624065-A-C **
23204922-C-T 21043036-C-T **
21026215-G-A 18864329-G-A P4_Dst **
19312266-C-A 17200386-C-A **
19388338-A-G 17276458-A-G **
19422030-C-A 17310150-C-A **
19476691-G-A 17364811-G-A **
19523334-C-A 17411454-C-A **
19738601-T-A 17626721-T-A P5_Prx **
19827413-G-T 17715533-G-T P5_Prx **
20376755-C-T 18214869-C-T P5_Dst **
20489469-C-A 18327583-C-A P5_Dst **
20536393-G-T 18374507-G-T P5_Dst **
20865606-C-G 18703720-C-G P4_Dst **
21026267-T-A 18864381-T-A P4_Dst **
21746761-C-A 19584875-C-A **
21026282-A-AG 18864396-A-AG P4_Dst **
21026302-C-G 18864416-C-G P4_Dst **
21026307-T-A 18864421-T-A P4_Dst **
21148443-T-A 18986557-T-A **
21148464-C-A 18986578-C-A **
21211499-G-A 19049613-G-A **
21225005-C-A 19063119-C-A **
21244050-C-A 19082164-C-A **
21297436-A-G 19135550-A-G **
21490964-C-T 19329078-C-T **
21635378-C-A 19473492-C-A **
21691969-G-C 19530083-G-C **
23201408-G-A 21039522-G-A FT194379 **
23311052-C-T 21149166-C-T FTB38705 **
19187656-G-A 17075776-G-A **
28728341-C-A 26582194-C-A **
28243705-G-T 26097558-G-T P1_b4 **
28457748-C-A 26311601-C-A 21×A**
28507321-T-A 26361174-T-A **
28518992-A-G 26372845-A-G **
28548951-G-T 26402804-G-T **
28583707-A-T 26437560-A-T **
28650802-A-G 26504655-A-G **
28724194-T-G 26578047-T-G **
28724195-GA-G 26578048-GA-G **
28724210-T-C 26578063-T-C **
28724776-A-G 26578629-A-G **
28742397-C-A 26596250-C-A **
27822252-T-G 25676105-T-G P1_Y2 **
28767842-C-A 26621695-C-A **
56850450-A-T **
56880474-C-A **
56887185-G-T **
13736-A-C **
13737-A-T **
13792-T-G **
13812-A-G **
13813-G-T **
13823-C-A **
13824-T-A **
29571-C-A **
28243701-G-T 26097554-G-T P1_b4 **
27713367-C-T 25567220-C-T P1_Y2 **
23340330-T-C 21178444-T-C **
24408354-G-T 22262207-G-T **
23395611-A-G 21233725-A-G **
23623457-A-C 21461571-A-C Y112059 **
23723518-C-T 21561632-C-T **
23723544-C-T 21561658-C-T 27×AT**
23745539-G-T 21583653-G-T **
23825064-A-ATAT 21663178-A-ATAT 25×T**
24013892-C-T 21867745-C-T **
24013908-G-T 21867761-G-T **
24315733-C-A 22169586-C-A P3_t1 **
24404117-G-T 22257970-G-T **
24407978-G-T 22261831-G-T **
24450629-T-A 22304482-T-A **
27584587-G-T 25438440-G-T P1_Y2 **
24458771-A-T 22312624-A-T **
24458777-A-T 22312630-A-T **
24841397-C-G 22695250-C-G IR1_R **
24877498-A-T 22731351-A-T g1 **
25887428-A-G 23741281-A-G P1_Y1 **
25975888-T-C 23829741-T-C P1_Y1 **
25975902-A-T 23829755-A-T P1_Y1 **
25975916-G-T 23829769-G-T P1_Y1 **
26170427-A-G 24024280-A-G P1_Y1 **
26248306-A-G 24102159-A-G P1_Y1 **
26463014-C-A 24316867-C-A P1_Y1 **
27398503-C-A 25252356-C-A P1_g3 **
19187668-TA-G 17075788-TA-G **
19187655-G-A 17075775-G-A **
14101001-C-A 11980295-C-A **
15497593-A-T 13385713-A-T Y50745 **
14931936-G-T 12820001-G-T **
14969123-T-C 12857198-T-C **
15047884-G-T 12935975-G-T Y50216 **
15169113-G-C 13057199-G-C **
15171314-T-C 13059400-T-C **
15171322-A-T 13059408-A-T **
15172697-TA-T 13060783-TA-T **
15364652-T-A 13252772-T-A **
15371037-C-A 13259157-C-A **
15398406-G-T 13286526-G-T **
15476299-T-G 13364419-T-G **
15575162-T-C 13463282-T-C **
14910943-C-T 12799010-C-T **
15662458-C-A 13550578-C-A **
15684713-T-G 13572833-T-G **
15764199-A-C 13652319-A-C **
15776068-A-G 13664188-A-G **
15789188-C-G 13677308-C-G **
15969930-C-T 13858050-C-T **
15997395-A-T 13885515-A-T **
16009517-T-A 13897637-T-A **
16029630-C-A 13917750-C-A **
16038090-G-A 13926210-G-A **
16040966-CA-C 13929086-CA-C **
16059066-G-T 13947186-G-T **
14910946-G-A 12799013-G-A FT222023 **
14910925-A-G 12798992-A-G **
16191757-T-A 14079877-T-A Y95562 **
14351091-A-T 12230386-A-T **
14176479-C-T 12055773-C-T Y46429FT65104 **
14191259-C-A 12070553-C-A **
14198413-TGTA-T 12077707-TGTA-T **
14255062-A-T 12134356-A-T **
14261683-A-G 12140977-A-G **
14261684-A-G 12140978-A-G **
14297891-G-T 12177185-G-T **
14344883-C-T 12224178-C-T 8×A**
14344938-C-T 12224233-C-T **
14345075-A-G 12224370-A-G **
14350118-A-T 12229413-A-T **
14356406-A-C 12235701-A-C **
14846975-G-C 12735041-G-C **
14356418-A-TT 12235713-A-TT **
14379920-G-C 12259216-G-C **
14428198-C-A 12307473-C-A **
3865542-A-C 3997501-A-C **
14521567-C-A 12409768-C-A **
14527467-C-A 12415668-C-A **
34163-G-A **
14539581-T-C 12427782-T-C **
14539582-G-A 12427783-G-A **
14575981-C-A 12464181-C-A **
14608031-G-T 12496233-G-T **
14825859-T-C 12713926-T-C **
16159019-A-AG 14047139-A-AG P8_Dst **
16214155-T-A 14102275-T-A **
19187640-T-C 17075760-T-C **
18524581-T-A 16412701-T-A P6_Dst **
18147536-TTG-T 16035656-TTG-T **
18151812-A-G 16039932-A-G **
18174833-T-C 16062953-T-C **
18174886-T-A 16063006-T-A **
18186072-CT-C 16074192-CT-C **
18188035-T-G 16076155-T-G **
18190881-C-T 16079001-C-T **
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18316156-A-C 16204276-A-C P6_Prx **
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15358739-C-A 13246858-C-A ***
14711925-T-A 12599992-T-A ***
13976047-T-A 11855341-T-A ***
13643346-C-A 11487670-C-A ***
15022820-A-G 12910909-A-G ***
20001296-TT-T,TA 17889416-TT-T,TA P5_Prx ***
14071380-GA-G 11950674-GA-G ***
23885315-A-G 21723429-A-G ***
14356909-A-T 12236204-A-T ***
16768516-C-A 14656636-C-A ***
10860033-A-C ***
10860013-A-T ***
10860011-A-G ***
15430364-C-A 13318484-C-A ***
10860000-C-T ***
10797988-TCCACTCCATA-T,TCCACTCCATT ***
15685137-G-T 13573257-G-T ***
10859985-C-T ***
18718202-TA-T,TAA 16606322-TA-T,TAA 12×A***
10988596-A-C ***
11009199-A-T ***
11009234-T-C ***
6878100-G-A 7010059-G-A ***
22023220-TTG-T 19861334-TTG-T ***
15406937-C-T 13295057-C-T ***
10892552-C-A ***
13484397-T-A 11328721-T-A ***
15163300-ATTT-A 13051386-ATTT-A 15×T***
15340412-C-T 13228531-C-T ***
8385578-G-T 8517537-G-T ***
11648564-G-T ***
21946451-C-A 19784565-C-A ***
22529878-AG-A 20367992-AG-A 9×G***
17533815-T-C 15421935-T-C ***
11649529-C-A ***
21367154-C-A 19205268-C-A ***
10691024-CTTCCATTCCA-C ***
6347733-AGAAAGAAA-A,AGAAAGAAG 6479692-AGAAAGAAA-A,AGAAAGAAG ***
19231346-G-T 17119466-G-T ***
15340415-A-C 13228534-A-C ***
5242536-C-A 5374495-C-A ***
14329736-GTT-G 12209030-GTT-G 17×T***
13487739-TC-T 11332063-TC-T ***
10859991-C-G ***
15623459-G-A 13511579-G-A ***
21456247-C-A 19294361-C-A ***
14742043-G-T 12630111-G-T ***
19062042-G-A 16950162-G-A ***
19187411-TTTG-T,TGT 17075531-TTTG-T,TGT ***
10815690-C-A ***
10789336-A-T ***
6833456-C-A 6965415-C-A ***
10926537-A-G ***
10877855-C-T ***
10877816-TC-T ***
10859976-C-T ***
10859975-C-T ***
17030976-C-A 14919096-C-A ***
10877814-A-C ***
17374883-G-T 15263003-G-T ***
10935589-T-C ***
15340423-G-T 13228542-G-T ***
8479427-A-G 8611386-A-G ***
23197360-CAA-C,CA 21035474-CAA-C,CA 17×A***
10935577-C-CGTTAT ***
10683239-AC-A ***
10683230-C-T ***
10683222-A-G ***
13470474-G-A 11314798-G-A ***
11033919-T-A ***
11033915-C-A ***
7123575-G-T 7255534-G-T ***
7342095-C-A 7474054-C-A ***
10780669-T-C,G ***
28766437-CAAA-C 26620290-CAAA-C 17×A***
2860011-A-G 2991970-A-G Y44941 ***
13470463-G-T 11314787-G-T ***
8119050-C-T 8251009-C-T ***
16430239-A-C 14318359-A-C ***
16478358-TC-T 14366478-TC-T ***
14294314-G-A 12173608-G-A ***
10860031-A-C ***
15340420-C-T 13228539-C-T ***
10770634-T-A,G ***
11033918-T-C ***
7255201-C-A 7387160-C-A ***
8069959-A-T 8201918-A-T 19×T***
10746908-A-C,T ***
17490867-C-A 15378987-C-A ***
17513322-C-A 15401442-C-A ***
8104862-C-A 8236821-C-A ***
8093604-T-C 8225563-T-C ***
19036796-C-T 16924916-C-T ***
7970902-C-A 8102861-C-A ***
18106340-C-A 15994460-C-A ***
10004568-C-A 10166959-C-A ***
10986889-C-T ***
7433359-T-G 7565318-T-G ***
7411502-T-A 7543461-T-A ***
2763762-C-A 2895721-C-A ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 397522949042877264467634051
Used in age calculations949042877264467634051
Counts of SNPs2725
Variant counts last updated 2022-07-30 03:29:55.


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