Valadez
BigY2: 628105MDKA Birth:
MexicoTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 628105 |
|---|---|---|---|---|---|---|---|
| hg19:Y:13687103-G-T hg38:Y:11531427-G-T | DYZ17 | A* | |||||
| hg19:Y:19601975-G-A hg38:Y:17490095-G-A | P5_Prx | Y | A* | ||||
| hg19:Y:6264446-C-A hg38:Y:6396405-C-A | IR3_Dst | A* | |||||
| hg19:Y:19786301-A-G hg38:Y:17674421-A-G | P5_Prx | A* | |||||
| hg19:Y:26095519-C-G hg38:Y:23949372-C-G | P1_Y1 | A* | |||||
| hg19:Y:26459725-G-C hg38:Y:24313578-G-C | P1_Y1 | A* | |||||
| hg19:Y:8873434-G-A hg38:Y:9005393-G-A | BY76514 FGC25828 | Y | + | ||||
| hg19:Y:2662399-G-T hg38:Y:2794358-G-T | BY55725 | Y | Y | + | |||
| hg19:Y:6736485-C-T hg38:Y:6868444-C-T | BY60969 | Y | Y | + | |||
| hg19:Y:6791415-G-A hg38:Y:6923374-G-A | BY61330 | Y | + | ||||
| hg19:Y:6944133-C-T hg38:Y:7076092-C-T | BY62437 | Y | Y | + | |||
| hg19:Y:7128738-T-C hg38:Y:7260697-T-C | BY63428 | Y | Y | + | |||
| hg19:Y:7748780-C-T hg38:Y:7880739-C-T | BY67340 | Y | Y | + | |||
| hg19:Y:7843071-T-A hg38:Y:7975030-T-A | BY68141 | Y | Y | + | |||
| hg19:Y:8386820-C-T hg38:Y:8518779-C-T | BY72213 | Y | Y | + | |||
| hg19:Y:8491164-C-G hg38:Y:8623123-C-G | BY156020 | Y | Y | + | |||
| hg19:Y:8747840-A-G hg38:Y:8879799-A-G | Y87893 Z45757 | Y | Y | + | |||
| hg19:Y:9437636-G-A hg38:Y:9600027-G-A | BY79389 | Y | Y | + | |||
| hg19:Y:9759862-T-C hg38:Y:9922253-T-C | BY80836 | Y | + | ||||
| hg19:Y:13844143-G-A hg38:Y:11723437-G-A | BY91234 | DYZ17 | + | ||||
| hg19:Y:14173549-G-T hg38:Y:12052843-G-T | BY54596 | Y | Y | + | |||
| hg19:Y:14249086-A-T hg38:Y:12128380-A-T | BY94335 | Y | Y | + | |||
| hg19:Y:14637630-C-T hg38:Y:12525699-C-T | FGC55842 | Y | Y | + | |||
| hg19:Y:14766996-A-AT hg38:Y:12655065-A-AT | + | ||||||
| hg19:Y:15481759-A-G hg38:Y:13369879-A-G | BY101871 | Y | Y | + | |||
| hg19:Y:16606807-A-C hg38:Y:14494927-A-C | BY108949 | Y | Y | + | |||
| hg19:Y:17658098-C-T hg38:Y:15546218-C-T | BY116406 | Y | Y | + | |||
| hg19:Y:17919142-G-A hg38:Y:15807262-G-A | BY118426 | Y | Y | + | |||
| hg19:Y:18077506-A-G hg38:Y:15965626-A-G | BY119767 | Y | Y | + | |||
| hg19:Y:18248341-A-G hg38:Y:16136461-A-G | BY121171 | Y | + | ||||
| hg19:Y:18396602-C-G hg38:Y:16284722-C-G | BY121673 | P6_Gap | + | ||||
| hg19:Y:18944069-C-T hg38:Y:16832189-C-T | BY124980 | Y | Y | + | |||
| hg19:Y:19276153-A-G hg38:Y:17164273-A-G | BY127874 | Y | Y | + | |||
| hg19:Y:19356783-G-A hg38:Y:17244903-G-A | BY128436 | Y | Y | + | |||
| hg19:Y:21645864-C-T hg38:Y:19483978-C-T | BY134426 | Y | Y | + | |||
| hg19:Y:23069929-T-C hg38:Y:20908043-T-C | BY142735 | Y | Y | + | |||
| hg19:Y:24398795-C-G hg38:Y:22252648-C-G | BY149604 | Y | + | ||||
| hg38:Y2:12904-G-C | + | ||||||
| hg38:Y2:18674-C-T | + | ||||||
| hg19:Y:2763795-C-CA hg38:Y:2895754-C-CA | 8×A | * | |||||
| hg19:Y:22277174-A-T hg38:Y:20115288-A-T | DYZ19 | * | |||||
| hg19:Y:22281620-T-C hg38:Y:20119734-T-C | DYZ19 | * | |||||
| hg19:Y:22303247-T-A hg38:Y:20141361-T-A | BY217005 | DYZ19 | * | ||||
| hg19:Y:28810984-C-T hg38:Y:26664837-C-T | * | ||||||
| hg19:Y:15936935-C-T hg38:Y:13825055-C-T | CTS4980 Z2782 | ** | |||||
| hg19:Y:19537901-C-CAA hg38:Y:17426021-C-CAA | 17×A | ** | |||||
| hg19:Y:25988137-C-A hg38:Y:23841990-C-A | P1_Y1 | ** | |||||
| hg19:Y:17122376-C-A hg38:Y:15010496-C-A | ** | ||||||
| hg19:Y:6623102-C-A hg38:Y:6755061-C-A | ** | ||||||
| hg19:Y:28631556-C-A hg38:Y:26485409-C-A | ** | ||||||
| hg19:Y:18059424-G-T hg38:Y:15947544-G-T | ** | ||||||
| hg19:Y:16550948-C-A hg38:Y:14439068-C-A | ** | ||||||
| hg38:Y:10896459-G-T | ** | ||||||
| hg19:Y:9514205-C-A hg38:Y:9676596-C-A | ** | ||||||
| hg19:Y:5004420-G-T hg38:Y:5136379-G-T | ** | ||||||
| hg38:Y:10663787-A-G | ** | ||||||
| hg19:Y:18195999-GTATA-G hg38:Y:16084119-GTATA-G | ** | ||||||
| hg19:Y:7918340-C-A hg38:Y:8050299-C-A | ** | ||||||
| hg19:Y:22587920-C-A hg38:Y:20426034-C-A | ** | ||||||
| hg19:Y:27497031-A-T hg38:Y:25350884-A-T | P1_Y2 | ** | |||||
| hg19:Y:16636843-C-A hg38:Y:14524963-C-A | ** | ||||||
| hg38:Y:10666708-G-T | ** | ||||||
| hg38:Y:10802218-CTCCAT-C | ** | ||||||
| hg19:Y:17876436-GT-G hg38:Y:15764556-GT-G | 8×T | ** | |||||
| hg19:Y:28715034-C-A hg38:Y:26568887-C-A | ** | ||||||
| hg38:Y:10940966-C-A | ** | ||||||
| hg19:Y:4271267-C-A hg38:Y:4403226-C-A | ** | ||||||
| hg19:Y:7704821-C-A hg38:Y:7836780-C-A | ** | ||||||
| hg19:Y:24359587-C-CAA hg38:Y:22213440-C-CAA | 13×A | ** | |||||
| hg19:Y:14764942-C-CAG hg38:Y:12653011-C-CAG | ** | ||||||
| hg19:Y:21839939-C-CTT hg38:Y:19678053-C-CTT | 17×T | ** | |||||
| hg38:Y:10992354-C-A | ** | ||||||
| hg38:Y:10912332-G-A | ** | ||||||
| hg19:Y:4179267-C-A hg38:Y:4311226-C-A | ** | ||||||
| hg19:Y:19302922-G-T hg38:Y:17191042-G-T | ** | ||||||
| hg19:Y:28806496-G-T hg38:Y:26660349-G-T | ** | ||||||
| hg38:Y:10969754-C-A | ** | ||||||
| hg19:Y:17561389-C-A hg38:Y:15449509-C-A | FT252092 | ** | |||||
| hg19:Y:6930624-C-A hg38:Y:7062583-C-A | ** | ||||||
| hg38:Y:10861330-C-A | ** | ||||||
| hg38:Y:10976245-C-T | FT438835 | ** | |||||
| hg38:Y:10983663-C-A | ** | ||||||
| hg38:Y:10976293-C-A | ** | ||||||
| hg19:Y:2948865-C-A hg38:Y:3080824-C-A | ** | ||||||
| hg38:Y:10663789-C-T | ** | ||||||
| hg38:Y:10791401-C-A | ** | ||||||
| hg19:Y:13937368-C-A hg38:Y:11816662-C-A | ** | ||||||
| hg38:Y:10871186-C-A | ** | ||||||
| hg19:Y:18756302-G-T hg38:Y:16644422-G-T | ** | ||||||
| hg19:Y:3268045-C-A hg38:Y:3400004-C-A | ** | ||||||
| hg19:Y:15622632-T-A hg38:Y:13510752-T-A | ** | ||||||
| hg19:Y:28481190-C-A hg38:Y:26335043-C-A | ** | ||||||
| hg19:Y:28819301-G-T hg38:Y:26673154-G-T | ** | ||||||
| hg19:Y:6492525-C-A hg38:Y:6624484-C-A | ** | ||||||
| hg38:Y:10952884-A-C | ** | ||||||
| hg38:Y:10677856-G-T | ** | ||||||
| hg38:Y:10988093-C-A | ** | ||||||
| hg19:Y:22881330-C-A hg38:Y:20719444-C-A | ** | ||||||
| hg19:Y:13258624-C-A hg38:Y:11102948-C-A | ** | ||||||
| hg38:Y:10773460-C-A | ** | ||||||
| hg38:Y:10875944-A-T | ** | ||||||
| hg19:Y:5081047-C-A hg38:Y:5213006-C-A | ** | ||||||
| hg38:Y:10660952-G-T | ** | ||||||
| hg19:Y:4756562-C-A hg38:Y:4888521-C-A | ** | ||||||
| hg38:Y:10967480-G-T | ** | ||||||
| hg19:Y:14764929-T-TG hg38:Y:12652998-T-TG | ** | ||||||
| hg19:Y:15650668-C-A hg38:Y:13538788-C-A | ** | ||||||
| hg19:Y:6029105-C-A hg38:Y:6161064-C-A | ** | ||||||
| hg19:Y:23818282-C-A hg38:Y:21656396-C-A | ** | ||||||
| hg19:Y:3229029-C-A hg38:Y:3360988-C-A | ** | ||||||
| hg19:Y:26435139-C-A hg38:Y:24288992-C-A | P1_Y1 | ** | |||||
| hg19:Y:4113104-C-A hg38:Y:4245063-C-A | ** | ||||||
| hg19:Y:23142288-C-A hg38:Y:20980402-C-A | ** | ||||||
| hg19:Y:7383621-C-A hg38:Y:7515580-C-A | ** | ||||||
| hg19:Y:28819336-G-T hg38:Y:26673189-G-T | ** | ||||||
| hg38:Y:10814087-C-A | ** | ||||||
| hg19:Y:3200883-C-A hg38:Y:3332842-C-A | ** | ||||||
| hg38:Y:10934368-C-A | ** | ||||||
| hg38:Y:10937492-A-T | ** | ||||||
| hg19:Y:6148767-T-A hg38:Y:6280726-T-A | IR3_Dst | ** | |||||
| hg38:Y:11659781-C-A | DYZ17 | ** | |||||
| hg19:Y:21130587-CAAATAAAT-C hg38:Y:18968701-CAAATAAAT-C | 11×AAAT | ** | |||||
| hg19:Y:9321878-C-A hg38:Y:9484269-C-A | ** | ||||||
| hg38:Y:10862735-T-C | ** | ||||||
| hg19:Y:17633223-C-A hg38:Y:15521343-C-A | ** | ||||||
| hg19:Y:28510281-C-A hg38:Y:26364134-C-A | ** | ||||||
| hg19:Y:2708678-C-A hg38:Y:2840637-C-A | ** | ||||||
| hg19:Y:2772915-T-G hg38:Y:2904874-T-G | ** | ||||||
| hg19:Y:2785193-C-A hg38:Y:2917152-C-A | ** | ||||||
| hg19:Y:2952003-T-A hg38:Y:3083962-T-A | ** | ||||||
| hg19:Y:2952112-C-A hg38:Y:3084071-C-A | ** | ||||||
| hg19:Y:3138776-G-T hg38:Y:3270735-G-T | ** | ||||||
| hg19:Y:3146828-G-T hg38:Y:3278787-G-T | ** | ||||||
| hg19:Y:3184079-G-T hg38:Y:3316038-G-T | ** | ||||||
| hg19:Y:3216023-C-A hg38:Y:3347982-C-A | ** | ||||||
| hg19:Y:3475710-G-T hg38:Y:3607669-G-T | ** | ||||||
| hg19:Y:3500662-A-C hg38:Y:3632621-A-C | ** | ||||||
| hg19:Y:3518411-C-A hg38:Y:3650370-C-A | ** | ||||||
| hg19:Y:3685311-G-T hg38:Y:3817270-G-T | ** | ||||||
| hg19:Y:3728906-T-G hg38:Y:3860865-T-G | ** | ||||||
| hg19:Y:3748245-G-T hg38:Y:3880204-G-T | ** | ||||||
| hg19:Y:3822809-C-A hg38:Y:3954768-C-A | ** | ||||||
| hg19:Y:3861279-C-A hg38:Y:3993238-C-A | ** | ||||||
| hg19:Y:3947005-G-T hg38:Y:4078964-G-T | ** | ||||||
| hg19:Y:4120519-G-T hg38:Y:4252478-G-T | ** | ||||||
| hg19:Y:4133856-T-C hg38:Y:4265815-T-C | ** | ||||||
| hg19:Y:4185695-C-A hg38:Y:4317654-C-A | ** | ||||||
| hg19:Y:4307701-G-T hg38:Y:4439660-G-T | ** | ||||||
| hg19:Y:4392940-G-T hg38:Y:4524899-G-T | ** | ||||||
| hg19:Y:4430445-G-A hg38:Y:4562404-G-A | ** | ||||||
| hg19:Y:4448628-C-A hg38:Y:4580587-C-A | ** | ||||||
| hg19:Y:4496559-A-G hg38:Y:4628518-A-G | ** | ||||||
| hg19:Y:4585419-A-C hg38:Y:4717378-A-C | ** | ||||||
| hg19:Y:4610064-C-A hg38:Y:4742023-C-A | ** | ||||||
| hg19:Y:4630166-T-G hg38:Y:4762125-T-G | ** | ||||||
| hg19:Y:4679934-T-G hg38:Y:4811893-T-G | ** | ||||||
| hg19:Y:4756533-C-A hg38:Y:4888492-C-A | FT60747 | ** | |||||
| hg19:Y:4940404-C-A hg38:Y:5072363-C-A | ** | ||||||
| hg19:Y:5004230-C-A hg38:Y:5136189-C-A | ** | ||||||
| hg19:Y:5004240-C-A hg38:Y:5136199-C-A | ** | ||||||
| hg19:Y:5004241-A-T hg38:Y:5136200-A-T | ** | ||||||
| hg19:Y:5004259-G-C hg38:Y:5136218-G-C | ** | ||||||
| hg19:Y:5004432-G-T hg38:Y:5136391-G-T | ** | ||||||
| hg19:Y:5067281-C-G hg38:Y:5199240-C-G | ** | ||||||
| hg19:Y:5151273-G-T hg38:Y:5283232-G-T | ** | ||||||
| hg19:Y:5172275-C-A hg38:Y:5304234-C-A | ** | ||||||
| hg19:Y:5491018-G-T hg38:Y:5622977-G-T | ** | ||||||
| hg19:Y:5559364-C-A hg38:Y:5691323-C-A | ** | ||||||
| hg19:Y:5562719-C-A hg38:Y:5694678-C-A | ** | ||||||
| hg19:Y:5707229-C-A hg38:Y:5839188-C-A | ** | ||||||
| hg19:Y:5714269-T-G hg38:Y:5846228-T-G | ** | ||||||
| hg19:Y:5736483-C-A hg38:Y:5868442-C-A | ** | ||||||
| hg19:Y:5755129-C-A hg38:Y:5887088-C-A | ** | ||||||
| hg19:Y:5789650-C-A hg38:Y:5921609-C-A | ** | ||||||
| hg19:Y:5806843-C-T hg38:Y:5938802-C-T | ** | ||||||
| hg19:Y:5849936-T-A hg38:Y:5981895-T-A | ** | ||||||
| hg19:Y:5934375-C-A hg38:Y:6066334-C-A | ** | ||||||
| hg19:Y:5967137-C-A hg38:Y:6099096-C-A | ** | ||||||
| hg19:Y:6078443-C-A hg38:Y:6210402-C-A | ** | ||||||
| hg19:Y:6089958-C-A hg38:Y:6221917-C-A | ** | ||||||
| hg19:Y:6092095-C-A hg38:Y:6224054-C-A | ** | ||||||
| hg19:Y:6283684-C-A hg38:Y:6415643-C-A | IR3_Dst | ** | |||||
| hg19:Y:6401572-C-A hg38:Y:6533531-C-A | ** | ||||||
| hg19:Y:6405340-G-T hg38:Y:6537299-G-T | ** | ||||||
| hg19:Y:6458676-T-C hg38:Y:6590635-T-C | ** | ||||||
| hg19:Y:6666225-G-T hg38:Y:6798184-G-T | ** | ||||||
| hg19:Y:6752400-C-A hg38:Y:6884359-C-A | ** | ||||||
| hg19:Y:6808091-C-G hg38:Y:6940050-C-G | ** | ||||||
| hg19:Y:6808099-G-T hg38:Y:6940058-G-T | ** | ||||||
| hg19:Y:6881279-C-A hg38:Y:7013238-C-A | ** | ||||||
| hg19:Y:7107379-C-A hg38:Y:7239338-C-A | ** | ||||||
| hg19:Y:7114326-G-T hg38:Y:7246285-G-T | ** | ||||||
| hg19:Y:7135227-G-T hg38:Y:7267186-G-T | ** | ||||||
| hg19:Y:7156626-C-T hg38:Y:7288585-C-T | ** | ||||||
| hg19:Y:7204932-G-A hg38:Y:7336891-G-A | ** | ||||||
| hg19:Y:7248057-T-G hg38:Y:7380016-T-G | ** | ||||||
| hg19:Y:7390160-C-A hg38:Y:7522119-C-A | ** | ||||||
| hg19:Y:7428125-G-T hg38:Y:7560084-G-T | ** | ||||||
| hg19:Y:7444056-C-A hg38:Y:7576015-C-A | ** | ||||||
| hg19:Y:7463937-G-T hg38:Y:7595896-G-T | IR1_L | ** | |||||
| hg19:Y:7500893-G-T hg38:Y:7632852-G-T | IR1_L | ** | |||||
| hg19:Y:7500902-G-T hg38:Y:7632861-G-T | IR1_L | ** | |||||
| hg19:Y:7500926-G-T hg38:Y:7632885-G-T | IR1_L | ** | |||||
| hg19:Y:7500944-C-A hg38:Y:7632903-C-A | IR1_L | ** | |||||
| hg19:Y:7500960-G-T hg38:Y:7632919-G-T | IR1_L | ** | |||||
| hg19:Y:7534643-CAAAAAA-C hg38:Y:7666602-CAAAAAA-C | 17×A | ** | |||||
| hg19:Y:7534664-A-C hg38:Y:7666623-A-C | ** | ||||||
| hg19:Y:7755243-A-T hg38:Y:7887202-A-T | ** | ||||||
| hg19:Y:7970318-C-A hg38:Y:8102277-C-A | ** | ||||||
| hg19:Y:8043218-G-C hg38:Y:8175177-G-C | ** | ||||||
| hg19:Y:8056329-C-A hg38:Y:8188288-C-A | ** | ||||||
| hg19:Y:8072373-C-A hg38:Y:8204332-C-A | ** | ||||||
| hg19:Y:8661266-T-A hg38:Y:8793225-T-A | ** | ||||||
| hg19:Y:8661278-A-C hg38:Y:8793237-A-C | ** | ||||||
| hg19:Y:8720217-C-A hg38:Y:8852176-C-A | ** | ||||||
| hg19:Y:8856594-C-A hg38:Y:8988553-C-A | ** | ||||||
| hg38:Y:9123461-T-C | ** | ||||||
| hg19:Y:9411414-C-A hg38:Y:9573805-C-A | ** | ||||||
| hg19:Y:9514239-C-A hg38:Y:9676630-C-A | ** | ||||||
| hg19:Y:9910391-G-T hg38:Y:10072782-G-T | ** | ||||||
| hg19:Y:9929947-G-A hg38:Y:10092338-G-A | ** | ||||||
| hg19:Y:9962618-C-A hg38:Y:10125009-C-A | ** | ||||||
| hg19:Y:10053588-T-G hg38:Y:10215979-T-G | ** | ||||||
| hg38:Y:10661559-C-A | ** | ||||||
| hg38:Y:10663781-C-G | ** | ||||||
| hg38:Y:10663832-C-G | ** | ||||||
| hg38:Y:10671631-C-G | ** | ||||||
| hg38:Y:10691952-C-A | ** | ||||||
| hg38:Y:10745330-C-A | ** | ||||||
| hg38:Y:10760769-C-T | ** | ||||||
| hg38:Y:10761220-A-T | ** | ||||||
| hg38:Y:10764107-C-A | ** | ||||||
| hg38:Y:10775040-C-G | ** | ||||||
| hg38:Y:10775053-T-C | ** | ||||||
| hg38:Y:10779726-C-A | ** | ||||||
| hg38:Y:10806264-C-A | ** | ||||||
| hg38:Y:10811139-C-A | ** | ||||||
| hg38:Y:10814032-C-A | ** | ||||||
| hg38:Y:10821696-C-A | ** | ||||||
| hg38:Y:10829787-C-A | ** | ||||||
| hg38:Y:10830221-A-T | ** | ||||||
| hg38:Y:10834816-A-T | ** | ||||||
| hg38:Y:10834822-A-T | ** | ||||||
| hg38:Y:10834831-C-T | ** | ||||||
| hg38:Y:10834845-C-G | ** | ||||||
| hg38:Y:10834853-T-G | ** | ||||||
| hg38:Y:10834862-A-T | ** | ||||||
| hg38:Y:10835241-C-A | ** | ||||||
| hg38:Y:10837564-G-T | ** | ||||||
| hg38:Y:10843933-C-A | ** | ||||||
| hg38:Y:10844863-C-T | ** | ||||||
| hg38:Y:10844873-C-G | ** | ||||||
| hg38:Y:10844889-A-C | ** | ||||||
| hg38:Y:10844909-T-C | ** | ||||||
| hg38:Y:10846170-C-A | ** | ||||||
| hg38:Y:10855760-T-A | FT272448 | ** | |||||
| hg38:Y:10856432-C-A | ** | ||||||
| hg38:Y:10857225-T-C | ** | ||||||
| hg38:Y:10860161-C-T | ** | ||||||
| hg38:Y:10874811-A-T | ** | ||||||
| hg38:Y:10874821-A-T | ** | ||||||
| hg38:Y:10877097-C-A | ** | ||||||
| hg38:Y:10901877-A-C | ** | ||||||
| hg38:Y:10907336-G-T | ** | ||||||
| hg38:Y:10916364-C-T | ** | ||||||
| hg38:Y:10920821-C-A | ** | ||||||
| hg38:Y:10924198-C-A | ** | ||||||
| hg38:Y:10924432-C-A | ** | ||||||
| hg38:Y:10926173-C-A | ** | ||||||
| hg38:Y:10930329-C-A | ** | ||||||
| hg38:Y:10936476-C-A | ** | ||||||
| hg38:Y:10940983-C-T | ** | ||||||
| hg38:Y:10947023-T-C | FT437725 | ** | |||||
| hg38:Y:10947777-G-T | ** | ||||||
| hg38:Y:10948658-T-A | ** | ||||||
| hg38:Y:10952899-A-C | ** | ||||||
| hg38:Y:10955548-C-A | ** | ||||||
| hg38:Y:10987042-A-T | ** | ||||||
| hg38:Y:10990073-T-G | ** | ||||||
| hg38:Y:11006305-C-A | ** | ||||||
| hg38:Y:11016486-C-T | ** | ||||||
| hg38:Y:11025098-C-G | ** | ||||||
| hg38:Y:11031800-C-G | FT272449 | ** | |||||
| hg38:Y:11034445-G-T | ** | ||||||
| hg19:Y:13395104-G-A hg38:Y:11239428-G-A | ** | ||||||
| hg19:Y:13442458-T-A hg38:Y:11286782-T-A | ** | ||||||
| hg19:Y:13445182-G-T hg38:Y:11289506-G-T | ** | ||||||
| hg19:Y:13565572-C-A hg38:Y:11409896-C-A | ** | ||||||
| hg19:Y:13566784-A-C hg38:Y:11411108-A-C | ** | ||||||
| hg19:Y:13579532-A-AC hg38:Y:11423856-A-AC | ** | ||||||
| hg38:Y:11650800-C-A | FT450207 | DYZ17 | ** | ||||
| hg19:Y:13902919-C-G hg38:Y:11782213-C-G | ** | ||||||
| hg19:Y:13941759-C-A hg38:Y:11821053-C-A | ** | ||||||
| hg19:Y:14055039-C-A hg38:Y:11934333-C-A | ** | ||||||
| hg19:Y:14226501-C-A hg38:Y:12105795-C-A | ** | ||||||
| hg19:Y:14228694-C-A hg38:Y:12107988-C-A | ** | ||||||
| hg19:Y:14293641-A-C hg38:Y:12172935-A-C | ** | ||||||
| hg19:Y:14356361-C-A hg38:Y:12235656-C-A | ** | ||||||
| hg19:Y:14395691-T-G hg38:Y:12274987-T-G | ** | ||||||
| hg19:Y:14397651-C-G hg38:Y:12276947-C-G | ** | ||||||
| hg19:Y:14397671-A-C hg38:Y:12276967-A-C | ** | ||||||
| hg19:Y:14457099-G-T hg38:Y:12336372-G-T | ** | ||||||
| hg19:Y:14526618-T-A hg38:Y:12414819-T-A | ** | ||||||
| hg19:Y:14533388-C-A hg38:Y:12421589-C-A | ** | ||||||
| hg19:Y:14567679-T-C hg38:Y:12455879-T-C | ** | ||||||
| hg19:Y:14743017-C-A hg38:Y:12631085-C-A | ** | ||||||
| hg19:Y:14793592-G-T hg38:Y:12681663-G-T | ** | ||||||
| hg19:Y:14795053-C-A hg38:Y:12683124-C-A | ** | ||||||
| hg19:Y:14832069-G-A hg38:Y:12720136-G-A | ** | ||||||
| hg19:Y:15044999-C-A hg38:Y:12933089-C-A | ** | ||||||
| hg19:Y:15073101-A-C hg38:Y:12961191-A-C | ** | ||||||
| hg19:Y:15081015-C-A hg38:Y:12969105-C-A | ** | ||||||
| hg19:Y:15084700-G-C hg38:Y:12972790-G-C | FT260685 | ** | |||||
| hg19:Y:15128074-G-T hg38:Y:13016161-G-T | ** | ||||||
| hg19:Y:15173555-G-T hg38:Y:13061641-G-T | ** | ||||||
| hg19:Y:15746290-C-A hg38:Y:13634410-C-A | ** | ||||||
| hg19:Y:15887529-T-C hg38:Y:13775649-T-C | ** | ||||||
| hg19:Y:15937247-T-A hg38:Y:13825367-T-A | ** | ||||||
| hg19:Y:15971266-T-G hg38:Y:13859386-T-G | ** | ||||||
| hg19:Y:16002264-A-G hg38:Y:13890384-A-G | ** | ||||||
| hg19:Y:16102013-TTTG-T hg38:Y:13990133-TTTG-T | P8_Prx | ** | |||||
| hg19:Y:16425025-C-T hg38:Y:14313145-C-T | ** | ||||||
| hg19:Y:16430977-C-A hg38:Y:14319097-C-A | ** | ||||||
| hg19:Y:16432772-C-A hg38:Y:14320892-C-A | ** | ||||||
| hg19:Y:16603302-AT-A hg38:Y:14491422-AT-A | ** | ||||||
| hg19:Y:16621198-C-A hg38:Y:14509318-C-A | ** | ||||||
| hg19:Y:16625078-G-T hg38:Y:14513198-G-T | ** | ||||||
| hg19:Y:16654440-G-A hg38:Y:14542560-G-A | ** | ||||||
| hg19:Y:16930273-T-G hg38:Y:14818393-T-G | ** | ||||||
| hg19:Y:16952640-C-A hg38:Y:14840760-C-A | ** | ||||||
| hg19:Y:17095703-C-A hg38:Y:14983823-C-A | ** | ||||||
| hg19:Y:17122398-C-A hg38:Y:15010518-C-A | ** | ||||||
| hg19:Y:17372292-C-A hg38:Y:15260412-C-A | ** | ||||||
| hg19:Y:17377773-G-T hg38:Y:15265893-G-T | ** | ||||||
| hg19:Y:17486353-G-T hg38:Y:15374473-G-T | ** | ||||||
| hg19:Y:17503989-C-A hg38:Y:15392109-C-A | ** | ||||||
| hg19:Y:17548108-C-A hg38:Y:15436228-C-A | ** | ||||||
| hg19:Y:17654113-C-A hg38:Y:15542233-C-A | ** | ||||||
| hg19:Y:17730424-C-A hg38:Y:15618544-C-A | ** | ||||||
| hg19:Y:17737539-G-C hg38:Y:15625659-G-C | ** | ||||||
| hg19:Y:17854424-C-A hg38:Y:15742544-C-A | ** | ||||||
| hg19:Y:18151944-G-T hg38:Y:16040064-G-T | ** | ||||||
| hg19:Y:18151992-C-T hg38:Y:16040112-C-T | ** | ||||||
| hg19:Y:18186730-C-A hg38:Y:16074850-C-A | ** | ||||||
| hg19:Y:18281927-A-T hg38:Y:16170047-A-T | P6_Prx | ** | |||||
| hg19:Y:18290807-C-A hg38:Y:16178927-C-A | P6_Prx | ** | |||||
| hg19:Y:18819382-G-T hg38:Y:16707502-G-T | ** | ||||||
| hg19:Y:18847833-G-T hg38:Y:16735953-G-T | ** | ||||||
| hg19:Y:19030072-T-TAA hg38:Y:16918192-T-TAA | 13×A | ** | |||||
| hg19:Y:19301539-G-T hg38:Y:17189659-G-T | ** | ||||||
| hg19:Y:19556476-C-A hg38:Y:17444596-C-A | ** | ||||||
| hg19:Y:19557278-C-A hg38:Y:17445398-C-A | ** | ||||||
| hg19:Y:19562631-G-C hg38:Y:17450751-G-C | ** | ||||||
| hg19:Y:19848169-G-C hg38:Y:17736289-G-C | P5_Prx | ** | |||||
| hg19:Y:20307931-C-A hg38:Y:18146045-C-A | P5_Dst | ** | |||||
| hg19:Y:20423970-GTT-G hg38:Y:18262084-GTT-G | P5_Dst | ** | |||||
| hg19:Y:20424025-T-A hg38:Y:18262139-T-A | P5_Dst | ** | |||||
| hg19:Y:20511043-G-T hg38:Y:18349157-G-T | P5_Dst | ** | |||||
| hg19:Y:20760914-T-C hg38:Y:18599028-T-C | P4_Prx | ** | |||||
| hg19:Y:21061788-C-A hg38:Y:18899902-C-A | ** | ||||||
| hg19:Y:21262753-A-C hg38:Y:19100867-A-C | ** | ||||||
| hg19:Y:21281104-A-G hg38:Y:19119218-A-G | ** | ||||||
| hg19:Y:21375885-C-A hg38:Y:19213999-C-A | ** | ||||||
| hg19:Y:21458588-A-G hg38:Y:19296702-A-G | ** | ||||||
| hg19:Y:21534739-G-T hg38:Y:19372853-G-T | ** | ||||||
| hg19:Y:21580551-A-T hg38:Y:19418665-A-T | ** | ||||||
| hg19:Y:21681659-A-C hg38:Y:19519773-A-C | ** | ||||||
| hg19:Y:21875016-G-GA hg38:Y:19713130-G-GA | ** | ||||||
| hg19:Y:22013213-G-C hg38:Y:19851327-G-C | ** | ||||||
| hg19:Y:22017997-T-TAA hg38:Y:19856111-T-TAA | 10×A | ** | |||||
| hg19:Y:22085336-C-A hg38:Y:19923450-C-A | ** | ||||||
| hg19:Y:22170046-A-C hg38:Y:20008160-A-C | ** | ||||||
| hg19:Y:22202526-G-A hg38:Y:20040640-G-A | FT182400 | ** | |||||
| hg19:Y:22205533-A-C hg38:Y:20043647-A-C | ** | ||||||
| hg19:Y:22485248-C-A hg38:Y:20323362-C-A | DYZ19 | ** | |||||
| hg19:Y:22513247-C-A hg38:Y:20351361-C-A | ** | ||||||
| hg19:Y:22730614-A-G hg38:Y:20568728-A-G | ** | ||||||
| hg19:Y:22808845-C-A hg38:Y:20646959-C-A | ** | ||||||
| hg19:Y:22965344-C-A hg38:Y:20803458-C-A | ** | ||||||
| hg19:Y:22980530-C-A hg38:Y:20818644-C-A | ** | ||||||
| hg19:Y:23062759-C-A hg38:Y:20900873-C-A | ** | ||||||
| hg19:Y:23086511-G-T hg38:Y:20924625-G-T | ** | ||||||
| hg19:Y:23434440-C-A hg38:Y:21272554-C-A | ** | ||||||
| hg19:Y:23512387-G-T hg38:Y:21350501-G-T | ** | ||||||
| hg19:Y:23786422-C-A hg38:Y:21624536-C-A | ** | ||||||
| hg38:Y:21751860-G-T | ** | ||||||
| hg19:Y:24402385-C-A hg38:Y:22256238-C-A | ** | ||||||
| hg19:Y:24924355-C-A hg38:Y:22778208-C-A | g1 | ** | |||||
| hg19:Y:24942991-A-G hg38:Y:22796844-A-G | g1 | ** | |||||
| hg19:Y:25994998-G-T hg38:Y:23848851-G-T | P1_Y1 | ** | |||||
| hg19:Y:26192921-T-G hg38:Y:24046774-T-G | P1_Y1 | ** | |||||
| hg19:Y:27750038-A-G hg38:Y:25603891-A-G | P1_Y2 | ** | |||||
| hg19:Y:27759131-T-A hg38:Y:25612984-T-A | P1_Y2 | ** | |||||
| hg19:Y:27906830-G-A hg38:Y:25760683-G-A | P1_Y2 | ** | |||||
| hg19:Y:28548956-G-T hg38:Y:26402809-G-T | ** | ||||||
| hg19:Y:28549841-G-T hg38:Y:26403694-G-T | ** | ||||||
| hg19:Y:28595920-A-C hg38:Y:26449773-A-C | ** | ||||||
| hg19:Y:28627982-G-T hg38:Y:26481835-G-T | ** | ||||||
| hg19:Y:28634938-C-A hg38:Y:26488791-C-A | ** | ||||||
| hg19:Y:28637090-T-C hg38:Y:26490943-T-C | ** | ||||||
| hg19:Y:28665616-C-A hg38:Y:26519469-C-A | ** | ||||||
| hg19:Y:28710856-C-A hg38:Y:26564709-C-A | ** | ||||||
| hg19:Y:28715041-C-A hg38:Y:26568894-C-A | ** | ||||||
| hg19:Y:28722379-G-T hg38:Y:26576232-G-T | ** | ||||||
| hg19:Y:28725244-C-A hg38:Y:26579097-C-A | ** | ||||||
| hg19:Y:28741171-C-A hg38:Y:26595024-C-A | ** | ||||||
| hg19:Y:28744941-C-A hg38:Y:26598794-C-A | ** | ||||||
| hg19:Y:28776260-C-A hg38:Y:26630113-C-A | ** | ||||||
| hg19:Y:28819335-G-C hg38:Y:26673188-G-C | ** | ||||||
| hg19:Y:28819340-G-C hg38:Y:26673193-G-C | ** | ||||||
| hg38:Y:56862426-G-T | ** | ||||||
| hg38:Y:56883996-C-T | ** | ||||||
| hg38:Y:10959476-T-A | *** | ||||||
| hg38:Y:10959488-C-G | *** | ||||||
| hg38:Y:10959493-C-A | *** | ||||||
| hg38:Y:10959496-T-A | *** | ||||||
| hg38:Y:10959511-C-A | *** | ||||||
| hg38:Y:10959538-C-A | *** | ||||||
| hg19:Y:16643402-C-A hg38:Y:14531522-C-A | *** | ||||||
| hg19:Y:16703659-G-T hg38:Y:14591779-G-T | *** | ||||||
| hg38:Y:10970980-C-A | *** | ||||||
| hg19:Y:4433673-C-A hg38:Y:4565632-C-A | *** | ||||||
| hg38:Y:56846289-C-T | *** | ||||||
| hg19:Y:19135257-G-T hg38:Y:17023377-G-T | *** | ||||||
| hg19:Y:13493776-C-A hg38:Y:11338100-C-A | *** | ||||||
| hg19:Y:23097512-G-GA,GAA hg38:Y:20935626-G-GA,GAA | 13×A | *** | |||||
| hg38:Y:10988592-TTTCATTCCAC-T,TTACAGTCCAC | *** | ||||||
| hg19:Y:2758196-C-A hg38:Y:2890155-C-A | *** | ||||||
| hg19:Y:7256093-GA-G,GAAA hg38:Y:7388052-GA-G,GAAA | 18×A | *** | |||||
| hg19:Y:7768769-C-A hg38:Y:7900728-C-A | *** | ||||||
| hg19:Y:9852982-GAAAGAGA-G hg38:Y:10015373-GAAAGAGA-G | *** | ||||||
| hg38:Y:10776010-C-CGGATG | *** | ||||||
| hg38:Y:10821889-C-CTGCAG | *** | ||||||
| hg38:Y:10821904-C-CTAAAG | *** | ||||||
| hg38:Y:10909669-C-A | *** | ||||||
| hg38:Y:10909740-C-G | *** | ||||||
| hg38:Y:11005148-C-A | *** | ||||||
| hg19:Y:14473738-CAA-C,CA hg38:Y:12353007-CAA-C,CA | 14×A | *** | |||||
| hg19:Y:16351954-C-T hg38:Y:14240074-C-T | *** | ||||||
| hg19:Y:18937610-G-T hg38:Y:16825730-G-T | *** | ||||||
| hg19:Y:21212419-TCAG-T hg38:Y:19050533-TCAG-T | *** | ||||||
| hg19:Y:21262423-C-A hg38:Y:19100537-C-A | *** | ||||||
| hg19:Y:21584371-C-A hg38:Y:19422485-C-A | *** | ||||||
| hg19:Y:21853790-C-AA hg38:Y:19691904-C-AA | *** | ||||||
| hg19:Y:23401395-A-G hg38:Y:21239509-A-G | *** | ||||||
| hg19:Y:23761608-A-AGAAAAG hg38:Y:21599722-A-AGAAAAG | 23×AAG | *** | |||||
| hg19:Y:23761609-A-G hg38:Y:21599723-A-G | *** | ||||||
| hg19:Y:23761611-G-A hg38:Y:21599725-G-A | *** | ||||||
| hg38:Y:56839691-T-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 628105 | 9914364 | 8056875 | 7922554 |
| Used in age calculations | 9914364 | 8056875 | 7922554 |
| Counts of SNPs | 26 | 26 |
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