Tree Position

A0-T-YP2191 > P305 > L413/PF1409/V31 > M168/PF1416 > P143 > M89/PF2746 > F1329/M3658 > F929 > IJK > IJ > M170 > Z2881 > DF29 > Z2336 > Z2337 > Z2338 > P109 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
MK11564
18347461-C-T 16235581-C-T P6_Prx A*
21622684-C-CT 19460798-C-CT 11×TA*
13687769-A-C 11532093-A-C A*
6233726-T-TCA 6365685-T-TCA IR3_Dst 13×CAA*
23715672-G-T 21553786-G-T A*
13451272-C-A 11295596-C-A A*
2851992-G-GA 2983951-G-GA 11×AA*
22539925-T-A 20378039-T-A FGC21728 Y+
23390599-G-A 21228713-G-A BY35245 YY+
7065637-C-A 7197596-C-A FGC21705 YY+
19230346-T-A 17118466-T-A BY35247 YY+
14027736-T-C 11907030-T-C BY92426 YY+
9848737-G-C 10011128-G-C BY81418 YY+
14437956-G-A 12317229-G-A FGC21711 Y+
22507686-T-C 20345800-T-C DYZ19 +
4961309-G-A 5093268-G-A BY47477 +
22272195-G-T 20110309-G-T DYZ19 +
18921103-G-A 16809223-G-A FGC21723 YY+
10007349-G-A 10169740-G-A BY35250 Y+
14733878-A-AT 12621946-A-AT +
14233076-C-G 12112370-C-G FGC21708 YY+
19066437-C-A 16954557-C-A BY125944 YY+
7961633-G-A 8093592-G-A S10891 YY+
7421511-T-C 7553470-T-C BY65134 YY+
14018600-G-A 11897894-G-A BY92332 YY+
18238188-G-T 16126308-G-T BY35246 Y+
6824158-C-T 6956117-C-T BY61533 YY+
7260759-G-T 7392718-G-T BY35249 YY+
17810338-C-T 15698458-C-T FGC21722 YY+
23302348-C-T 21140462-C-T PR7333 FGC21731 YY+
23847493-A-C 21685607-A-C BY35248 Y+
17223636-C-A 15111756-C-A FGC21720 YY+
7531198-G-T 7663157-G-T BY65702 YY+
17119086-G-A 15007206-G-A FGC21718 YY+
26454832-T-TCA 24308685-T-TCA P1_Y1 12×CA*
4472544-C-T 4604503-C-T *
22048230-C-CA 19886344-C-CA 15×A*
7137200-C-CAT 7269159-C-CAT *
3191330-C-A 3323289-C-A **
3107733-G-T 3239692-G-T **
3051428-C-A 3183387-C-A **
3201010-G-T 3332969-G-T **
2927418-C-A 3059377-C-A **
3092590-G-T 3224549-G-T **
2928406-G-T 3060365-G-T **
56886997-G-T **
2885640-C-A 3017599-C-A **
2853463-T-A 2985422-T-A **
2853461-T-A 2985420-T-A **
2853447-T-A 2985406-T-A **
19244808-GT-G 17132928-GT-G **
14986103-C-A 12874171-C-A **
6368996-G-T 6500955-G-T **
28558248-C-A 26412101-C-A **
21394073-C-A 19232187-C-A **
10678150-T-A **
19302224-G-T 17190344-G-T **
19318249-G-T 17206369-G-T **
10678164-T-C **
23058625-A-C 20896739-A-C **
2701180-A-C 2833139-A-C **
4614880-C-A 4746839-C-A **
3201083-G-T 3333042-G-T **
5678673-C-A 5810632-C-A **
7002811-C-A 7134770-C-A **
6934674-T-G 7066633-T-G **
6773209-C-A 6905168-C-A **
6626159-G-T 6758118-G-T **
6626075-G-T 6758034-G-T **
6593304-C-A 6725263-C-A **
6213827-C-A 6345786-C-A IR3_Dst **
6080355-C-CT 6212314-C-CT 8×T**
6055494-C-A 6187453-C-A **
5728934-T-TAG 5860893-T-TAG **
5707808-C-A 5839767-C-A **
5690016-C-A 5821975-C-A **
5255677-C-A 5387636-C-A **
3330402-T-C 3462361-T-C **
5228455-G-T 5360414-G-T **
4832590-C-A 4964549-C-A **
4805436-G-T 4937395-G-T **
4704662-C-A 4836621-C-A **
4651541-C-A 4783500-C-A **
4246695-A-C 4378654-A-C **
4107991-G-T 4239950-G-T **
3967543-G-T 4099502-G-T **
3826000-G-T 3957959-G-T **
3640689-C-A 3772648-C-A **
3577399-G-T 3709358-G-T **
3426378-G-T 3558337-G-T **
14263247-C-A 12142541-C-A **
10927260-C-A **
3622190-C-A 3754149-C-A **
13483281-A-G 11327605-A-G **
11018927-C-A **
13474453-T-C 11318777-T-C **
13474463-GAT-G 11318787-GAT-G **
18632303-C-A 16520423-C-A **
17871751-C-A 15759871-C-A **
4256824-C-A 4388783-C-A **
20974879-CAACAACA-C 18812993-CAACAACA-C P4_Dst **
7363756-C-A 7495715-C-A **
13474439-C-T 11318763-C-T **
10916284-G-T **
13981851-C-A 11861145-C-A **
21244922-C-A 19083036-C-A **
56839008-G-A **
10983137-C-A **
20404388-G-T 18242502-G-T P5_Dst **
4080873-C-A 4212832-C-A **
19795563-C-A 17683683-C-A P5_Prx **
25461487-C-A 23315340-C-A P2_r2 **
22010321-C-A 19848435-C-A **
11016547-C-A **
10669419-A-T **
10963347-C-A **
20979227-T-A 18817341-T-A P4_Dst **
6244491-AC-A 6376450-AC-A IR3_Dst **
10847018-C-A **
15918444-C-A 13806564-C-A **
10931026-A-C **
10983540-G-T **
9944989-C-A 10107380-C-A **
9930043-C-A 10092434-C-A **
10842544-C-T **
11676555-GGGAAT-G **
19846560-CT-C 17734680-CT-C P5_Prx **
19600633-C-T 17488753-C-T P5_Prx **
5263569-A-C 5395528-A-C **
13695491-G-T 11539815-G-T **
19529488-G-GAA 17417608-G-GAA 10×A**
13544831-C-A 11389155-C-A **
13935938-C-A 11815232-C-A **
22993466-C-A 20831580-C-A **
10934497-G-T **
5523010-C-A 5654969-C-A **
17158560-C-A 15046680-C-A **
10983113-G-T **
10998762-C-A **
10667979-A-C **
10770577-T-C **
26152071-C-A 24005924-C-A P1_Y1 **
27861938-C-A 25715791-C-A P1_Y2 **
19425722-C-A 17313842-C-A **
24638021-A-AG 22491874-A-AG P3_t2 **
20850612-A-ATGTG 18688726-A-ATGTG P4_Dst 11×TG**
23742223-G-T 21580337-G-T **
10997228-G-T **
17081268-A-AAT 14969388-A-AAT 9×AT**
3831043-C-A 3963002-C-A **
10931021-C-A **
8720244-C-A 8852203-C-A **
18524583-G-T 16412703-G-T P6_Dst **
6096909-C-A 6228868-C-A **
10923844-C-A **
13527605-C-A 11371929-C-A **
10756132-C-A **
23058618-A-C 20896732-A-C **
4926224-G-T 5058183-G-T **
19286388-C-A 17174508-C-A **
14568127-C-A 12456327-C-A **
7142813-C-A 7274772-C-A **
10842542-T-C **
7043355-C-A 7175314-C-A **
7754709-T-C 7886668-T-C **
7165352-C-A 7297311-C-A **
11652849-G-A **
14539378-G-T 12427579-G-T **
14514358-G-T 12402563-G-T **
14502357-A-T 12390562-A-T **
14395698-C-A 12274994-C-A **
14373687-C-A 12252983-C-A **
14373675-C-A 12252971-C-A **
14219522-C-A 12098816-C-A **
14130716-CT-C 12010010-CT-C 8×T**
14074175-C-A 11953469-C-A **
14073468-T-A 11952762-T-A **
14030162-C-A 11909456-C-A **
13943166-C-A 11822460-C-A **
13939929-G-C 11819223-G-C **
13908378-G-A 11787672-G-A **
11643691-A-T **
18890545-G-GA 16778665-G-GA **
11643682-T-TTACAC **
13698251-T-G 11542575-T-G BY88970 **
13620821-C-A 11465145-C-A **
13485653-T-G 11329977-T-G **
18890551-G-A 16778671-G-A **
13239380-A-G 11083704-A-G **
11026911-CTCCAA-C **
11020278-CACTGA-C **
11014127-T-A **
11004097-T-G **
10997897-T-A **
10995248-C-G **
10988076-C-A **
10984141-C-A **
14608191-G-A 12496393-G-A **
14715256-G-T 12603323-G-T **
10983112-A-G **
16703578-G-T 14591698-G-T **
18266233-C-A 16154353-C-A **
18190715-C-A 16078835-C-A **
18135741-G-T 16023861-G-T **
17869721-C-A 15757841-C-A **
17825316-G-T 15713436-G-T **
17757662-T-G 15645782-T-G **
17548315-A-C 15436435-A-C **
17548197-T-A 15436317-T-A **
17547894-A-T 15436014-A-T **
18890541-A-AAAG 16778661-A-AAAG **
17085777-G-T 14973897-G-T **
16993358-C-A 14881478-C-A **
16739460-C-A 14627580-C-A **
16705591-C-A 14593711-C-A **
16621523-G-T 14509643-G-T **
14718844-G-T 12606912-G-T **
15696901-CTAACATGG-C 13585021-CTAACATGG-C **
14959797-T-C 12847872-T-C **
14988919-A-G 12876985-A-G **
14988922-T-C 12876988-T-C **
15047472-C-A 12935563-C-A **
15168839-C-A 13056925-C-A **
15378720-G-T 13266840-G-T **
16004220-T-C 13892340-T-C **
16469622-T-A 14357742-T-A **
16074102-A-C 13962222-A-C **
16186518-CA-C 14074638-CA-C **
16317414-G-T 14205534-G-T **
16345065-C-T 14233185-C-T **
16423708-G-A 14311828-G-A **
16445626-T-A 14333746-T-A **
10983122-A-G **
10974285-T-G **
7214480-C-A 7346439-C-A **
9411030-T-A 9573421-T-A **
10791617-C-A **
10765649-C-A **
10748020-C-CAAGT **
10691024-CTTCCATTCCATTCCATTCCA-C **
10677740-C-A **
10669654-A-T **
10669649-A-T **
10667984-A-C **
10667978-A-C **
10629081-C-A **
10627992-C-A **
10047679-G-T 10210070-G-T **
9724043-G-T 9886434-G-T IR3_Prx **
9551477-G-T 9713868-G-T IR3_Prx **
9078755-A-G 9241146-A-G **
10794658-C-T **
7754694-G-A 7886653-G-A **
7217476-C-A 7349435-C-A **
7231123-A-T 7363082-A-T **
7257233-G-T 7389192-G-T **
7258858-C-A 7390817-C-A **
7281843-T-A 7413802-T-A **
7524682-A-C 7656641-A-C **
10977313-C-A **
9034399-C-A 9196790-C-A Y88442 **
8238341-C-A 8370300-C-A **
8293216-A-T 8425175-A-T **
8379515-C-A 8511474-C-A **
8379589-G-A 8511548-G-A **
8735584-C-T 8867543-C-T Y39751 **
8987156-C-A 9149547-C-A **
10791884-C-T **
10794663-C-G **
10969079-TAAACA-T **
10885908-G-T **
10967348-C-A **
10954843-C-T **
10950334-C-T **
10937975-C-A **
10932252-T-C **
10931653-G-T **
10930244-A-C **
10927799-CT-C **
10927225-T-TTCCAC **
10923596-C-G **
10912613-C-A **
10907495-G-T **
10899399-C-A **
10886346-C-A **
10882882-T-C **
10825621-C-A **
10849202-A-G **
10825647-C-A **
10825657-C-A **
10825690-T-A **
10825719-C-A **
10832482-A-C **
10845546-T-A **
10852261-C-A **
10872481-C-A **
10856096-G-A **
10862217-C-G **
10865796-TCCATC-T **
10868381-TTCCACTCCACTCCAC-T **
10870401-C-G **
10870437-C-T **
15127909-C-A 13015996-C-A **
21244098-C-A 19082212-C-A **
15844676-C-A 13732796-C-A **
10868990-C-T **
10980769-CATTAA-C **
10763045-A-C **
11004425-C-T **
10747002-C-T **
10946606-C-A **
10946600-A-C **
10946571-C-T **
10925010-C-T **
13255261-C-A 11099585-C-A **
15189654-C-A 13077740-C-A **
10678149-T-C **
10678147-A-C **
10629135-T-C **
10629125-T-C **
15475222-C-A 13363342-C-A **
10756301-C-A **
13227287-C-A 11071611-C-A **
11020151-C-T **
11020152-T-G **
24433217-A-G 22287070-A-G **
10925336-T-C **
10925345-A-C **
10925350-A-ATTTCT **
24419342-T-A 22273195-T-A **
13695492-G-T 11539816-G-T **
24416973-C-A 22270826-C-A **
5455106-C-A 5587065-C-A **
24389884-A-C 22243737-A-C **
24293051-C-A 22146904-C-A P3_t1 **
10672802-A-C **
24247409-T-TTA 22101262-T-TTA P3_b1 **
10840043-T-A **
10777976-C-T **
56851276-C-T **
10930014-C-A **
10768634-A-C **
21285302-C-A 19123416-C-A **
10877816-T-A **
15137920-C-A 13026007-C-A **
23415340-ATATTTT-A 21253454-ATATTTT-A **
27435850-CAA-C 25289703-CAA-C P1_Y2 15×A**
10930025-A-G **
10762659-T-G **
10930030-A-C **
10930046-T-A **
10930048-C-T **
10930077-T-A **
10930100-G-T **
10930112-T-A **
10768624-A-G **
11024682-T-C **
10849635-C-T **
10946538-T-G **
10849655-C-T **
23818064-ATAATAATAATAATTCC-A 21656178-ATAATAATAATAATTCC-A **
23514371-T-A 21352485-T-A **
19377500-G-A 17265620-G-A **
10868995-G-T **
10946536-T-A **
10744375-A-C **
11024677-C-T **
11030260-GT-G **
3229180-G-T 3361139-G-T **
10868992-C-A **
11024628-C-A **
11024652-C-G **
11024654-A-T **
24636143-T-C 22489996-T-C P3_t2 **
14608244-G-A 12496446-G-A **
10692260-A-T **
21569955-C-A 19408069-C-A **
17012786-C-CATAT 14900906-C-CATAT 12×AT**
10062412-A-C 10224803-A-C **
10062414-G-C 10224805-G-C **
28706261-C-A 26560114-C-A **
28659921-A-G 26513774-A-G **
28601613-T-G 26455466-T-G **
9351151-C-T 9513542-C-T 21×AT**
13485564-C-G 11329888-C-G **
13474487-C-A 11318811-C-A **
21554473-A-AT 19392587-A-AT 17×T**
28476839-C-T 26330692-C-T **
28429903-C-A 26283756-C-A P1_gr2 **
27799452-T-A 25653305-T-A P1_Y2 **
27690315-T-A 25544168-T-A P1_Y2 **
13718534-C-T 11562858-C-T **
28724056-G-T 26577909-G-T **
17056866-A-G 14944986-A-G F21347 **
26124458-ACGAAAG-A 23978311-ACGAAAG-A P1_Y1 **
13139653-A-C 10629139-A-C **
26970963-GA-G 24824816-GA-G P1_r4 11×A**
56873230-C-A **
23801765-G-A 21639879-G-A **
27861875-CAAA-C 25715728-CAAA-C P1_Y2 32×A**
17994851-C-CAA 15882971-C-CAA P7_Prx 17×A**
19073838-GTATA-G 16961958-GTATA-G 16×TA**
28760086-C-A 26613939-C-A **
56747795-C-A **
56734835-G-T **
28791819-T-C 26645672-T-C **
13485587-C-CA 11329911-C-CA **
13485591-T-A 11329915-T-A **
28773890-C-A 26627743-C-A **
58985049-A-G 56838902-A-G **
17056869-C-T 14944989-C-T **
14608231-A-G 12496433-A-G **
10768593-C-G **
10678575-C-T **
10678590-C-T **
10678598-C-T **
10946589-C-A **
10768566-C-T **
10768584-A-G **
10768614-A-T **
10678560-T-C **
25881857-G-T 23735710-G-T P1_Y1 **
25720324-G-T 23574177-G-T P1_b3 **
11030717-T-C **
11030718-G-T **
11030724-CTTCAG-C **
14608226-T-C 12496428-T-C **
10678573-C-A **
10678556-A-C **
15947951-C-CT 13836071-C-CT 19×T**
58985064-A-G 56838917-A-G **
58986710-G-T 56840563-G-T **
9416731-G-GT 9579122-G-GT 23×T**
58985088-G-T 56838941-G-T **
58985135-C-A 56838988-C-A **
9777507-C-CA 9939898-C-CA 17×A**
5387430-CA-C 5519389-CA-C 18×A**
10070180-C-T 10232571-C-T **
4995592-C-A 5127551-C-A **
27690309-T-A 25544162-T-A P1_Y2 **
13199164-CA-C 11043488-CA-C 18×A**
10062512-T-A 10224903-T-A **
26262435-A-T 24116288-A-T P1_Y1 **
13705605-C-A 11549929-C-A **
8110720-C-A 8242679-C-A FGC25641 **
23340605-T-C 21178719-T-C **
23310619-C-A 21148733-C-A **
20404471-AAAAG-A 18242585-AAAAG-A P5_Dst **
2766688-A-AT 2898647-A-AT 9×T**
7532276-GTATATATATATATATATATATATATATATATATATA-G 7664235-GTATATATATATATATATATATATATATATATATATA-G 28×TA**
22001888-C-A 19840002-C-A **
10770600-C-T **
13404801-C-A 11249125-C-A **
3374218-G-T 3506177-G-T **
21993855-T-G 19831969-T-G **
10825653-G-T **
10906900-A-C **
10842571-C-G **
10842580-T-G **
21939653-G-T 19777767-G-T ZQ161 **
19846569-A-T 17734689-A-T P5_Prx 17×T**
21935193-G-A 19773307-G-A **
10924988-C-A **
27618044-C-A 25471897-C-A P1_Y2 **
22063979-C-A 19902093-C-A **
10653109-G-A **
22171425-TA-T 20009539-TA-T **
2845262-G-T 2977221-G-T 8×T**
7160586-C-CT 7292545-C-CT 15×T**
22264181-A-C 20102295-A-C DYZ19 **
11005097-C-G **
22264177-T-C 20102291-T-C DYZ19 **
22241177-TG-T 20079291-TG-T DYZ19 **
22170976-G-T 20009090-G-T **
24293027-T-G 22146880-T-G P3_t1 **
10930009-C-A **
6445116-C-A 6577075-C-A **
9589945-C-T 9752336-C-T IR3_Prx 10×T**
22167259-T-G 20005373-T-G **
13228206-A-G 11072530-A-G **
22085600-C-A 19923714-C-A **
13521171-C-A 11365495-C-A **
10980396-C-A **
10770588-C-T **
10961094-G-T **
22209144-G-T 20047258-G-T **
10822068-A-T **
15503238-C-A 13391358-C-A **
10669406-C-A **
13865644-C-A 11744938-C-A **
21351655-G-T 19189769-G-T **
13695473-A-G 11539797-A-G **
10925004-A-G **
18855968-C-A 16744088-C-A **
14263239-C-A 12142533-C-A **
21154620-G-A 18992734-G-A **
10987583-G-T **
3991777-C-A 4123736-C-A **
20998328-A-C 18836442-A-C P4_Dst **
10925005-T-TTCTGG **
10924985-C-T **
16039310-C-A 13927430-C-A **
21575046-C-T 19413160-C-T **
11656704-C-A **
21583285-G-T 19421399-G-T **
17518663-C-A 15406783-C-A **
10756129-C-A **
16336897-GTTTT-G 14225017-GTTTT-G 23×T**
10977971-C-A **
28730012-C-A 26583865-C-A **
10924972-T-C **
21457424-G-T 19295538-G-T **
11030288-A-G **
11030291-T-TTACTTCAG **
11030296-TCAC-T **
21427596-C-A 19265710-C-A **
7717631-TTCCC-T 7849590-TTCCC-T 7×TCCC**
10961089-G-T **
10961084-T-TGCACA **
6479483-C-A 6611442-C-A **
10972376-C-T **
22962008-GTTT-G 20800122-GTTT-G 27×T**
5537467-C-A 5669426-C-A **
25461474-C-A 23315327-C-A P2_r2 **
10865840-C-A **
14608219-C-A 12496421-C-A **
20230555-T-A 18068669-T-A P5_Dst **
11010286-C-T **
11010256-C-G **
11010253-C-G **
11010248-C-A **
11010246-A-T **
10669413-T-C **
10763036-T-A **
3250696-C-CT 3382655-C-CT 14×T**
10935627-C-CA **
26098001-TAAA-T 23951854-TAAA-T P1_Y1 22×A**
19394047-C-T 17282167-C-T **
9221713-ATACC-A 9384104-ATACC-A **
28556330-T-G 26410183-T-G **
23126476-T-A 20964590-T-A **
23062788-C-A 20900902-C-A **
10768550-C-T **
10768560-C-T **
10062501-C-T 10224892-C-T **
10925433-CCAATCGAGTCT-C **
10062502-T-C 10224893-T-C **
10062504-A-C 10224895-A-C **
7337076-C-A 7469035-C-A **
10689000-C-CTCCAT **
10925392-T-C **
10925430-A-ACTAAAC **
10840044-A-C **
11030282-G-T **
11643701-A-T **
11004578-G-T **
3836391-C-A 3968350-C-A **
30961-C-A **
10989118-AC-A **
10989115-T-TC **
10989104-C-A **
10989103-A-T **
10989089-C-T **
22311405-C-A 20149519-C-A DYZ19 **
11643698-G-T **
17085721-CTT-C 14973841-CTT-C 20×T**
22447359-G-T 20285473-G-T DYZ19 **
10945292-G-T **
10775895-A-T **
10927257-G-C **
18398163-G-T 16286283-G-T P6_Gap **
11020299-C-A **
14021246-A-C 11900540-A-C **
17056892-T-G 14945012-T-G **
10756291-G-C **
17056895-A-G 14945015-A-G **
17056896-C-G 14945016-C-G **
10756289-C-T **
10756274-A-C **
10756273-C-A **
10756267-C-T **
22316235-C-A 20154349-C-A DYZ19 **
10756294-T-C **
11004430-C-T **
10870424-C-T **
10845691-C-A **
27647734-C-A 25501587-C-A P1_Y2 ***
56835173-C-T ***
22645631-C-CTATA 20483745-C-CTATA ***
22468919-A-G 20307033-A-G DYZ19 ***
19187396-T-A,TA 17075516-T-A,TA ***
22551135-T-C 20389249-T-C ***
23416511-CTTT-C,CTT 21254625-CTTT-C,CTT 16×T***
6915796-A-AT 7047755-A-AT 22×T***
18742478-C-A 16630598-C-A ***
17118395-CT-C,CTT 15006515-CT-C,CTT 16×T***
23127414-CAAAAA-C 20965528-CAAAAA-C 24×A***
2903232-CTCCTTCCT-C,CTCCT 3035191-CTCCTTCCT-C,CTCCT 18×TCCT***
10797941-ACTCTT-A,ACTCCT ***
14914672-C-CT 12802739-C-CT 17×T***
13486824-G-T 11331148-G-T ***
2750839-CAAAA-C 2882798-CAAAA-C 16×A***
15876360-CAAA-C 13764480-CAAA-C 21×A***
56685546-G-T ***
10657398-T-G ***
10666961-T-C ***
10776066-G-A,T ***
10667019-C-GGTTTA ***
10934765-AG-A,AA ***
21589722-CAA-C 19427836-CAA-C 12×A***
3706835-ATG-A 3838794-ATG-A ***
11022919-C-T ***
10761814-C-A ***
10689161-C-T ***
23807578-CAAA-C 21645692-CAAA-C 21×A***
21953535-CTT-C,CT 19791649-CTT-C,CT 15×T***
13453323-C-G 11297647-C-G ***
9127506-CTT-C 9289897-CTT-C 22×T***
23013378-A-AT 20851492-A-AT Y31721 9×T***
13486785-A-G 11331109-A-G ***
13486849-T-A 11331173-T-A ***
18804474-AAGAGAGAGAG-A 16692594-AAGAGAGAGAG-A 26×AG***
2861534-CA-C 2993493-CA-C 25×A***
58972181-C-T 56826034-C-T ***
7783780-G-GA 7915739-G-GA 12×A***
58983906-GTC-G 56837759-GTC-G ***
13453269-C-A 11297593-C-A ***
17419439-ATT-A 15307559-ATT-A 25×T***
24877503-CTT-C 22731356-CTT-C g1 23×T***
13486812-C-A 11331136-C-A ***
58981843-T-G 56835696-T-G ***
19520845-T-TA 17408965-T-TA 21×A***
9771940-CTT-C 9934331-CTT-C 18×T***
16076178-T-TA 13964298-T-TA 11×A***
6592615-T-TATA,TATAATA 6724574-T-TATA,TATAATA 13×ATA***
56826413-GATTGTATTCC-G,GATTGCATTCC ***
11671358-GTGGAA-G ***
17192867-T-TG,TGG 15080987-T-TG,TGG 12×G***
22869128-C-A 20707242-C-A ***
10785272-C-A ***
11005105-C-A ***
15495460-CAA-C,CAAA 13383580-CAA-C,CAAA 16×A***
13453278-C-T 11297602-C-T ***
19411914-A-AAAAG 17300034-A-AAAAG 14×AAAG***
13453333-C-A 11297657-C-A ***
14021235-G-C 11900529-G-C ***
10678139-A-T ***
16909178-C-CTT 14797298-C-CTT 16×T***
10678141-C-A ***
2707975-GT-G,GTTT 2839934-GT-G,GTTT 18×T***
5871809-G-A 6003768-G-A ***
6699396-C-A 6831355-C-A ***
8061431-C-CTT 8193390-C-CTT 13×T***
9942069-T-TG 10104460-T-TG ***
13454654-T-A 11298978-T-A ***
14712009-C-A 12600076-C-A ***
5761331-C-A 5893290-C-A ***
14589969-G-T 12478169-G-T ***
3627581-C-A 3759540-C-A ***
14021251-C-G 11900545-C-G ***
10869035-T-C ***
5894968-G-A 6026927-G-A ***
7141863-C-A 7273822-C-A ***
10935539-T-A,C ***
11005128-T-A ***
11005133-A-G ***
11005150-C-T ***
10796671-C-CCCCTG ***
13453123-T-G 11297447-T-G 14×CATTC***
9397991-C-A 9560382-C-A ***
10985176-T-C ***
14021248-G-T 11900542-G-T ***
15468678-C-CA 13356798-C-CA 23×A***
10693545-T-A,G ***
10971965-TCCATTC-T,TCCACTCCATTC ***
10776006-A-T ***
14295163-CT-C,CTT 12174457-CT-C,CTT 13×T***
10926639-T-G ***
13453292-T-G 11297616-T-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: MK11564975120779829767849610
Used in age calculations975120779829767849610
Counts of SNPs2120
Variant counts last updated 2018-07-20 16:20:23.



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