Reynolds
BigY2: 307162Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 307162 |
---|---|---|---|---|---|---|---|---|
13689954-T-C | 11534278-T-C | BY211001 | A* | |||||
22478549-G-T | 20316663-G-T | ZP227 | BY22227 | DYZ19 | + | |||
3833885-C-T | 3965844-C-T | BY57886 | + | |||||
13846414-C-T | 11725708-C-T | BY32315 | + | |||||
18995245-T-A | 16883365-T-A | A3442 | Y | Y | + | |||
22263114-G-C | 20101228-G-C | BY22226 | DYZ19 | + | ||||
22654134-A-G | 20492248-A-G | BY22228 S873 | Y | Y | + | |||
22736000-C-T | 20574114-C-T | S874 BY22229 | Y | Y | + | |||
24359950-A-G | 22213803-A-G | BY22230 | + | |||||
24242315-C-A | 22096168-C-A | P3_b1 | * | |||||
59004619-G-A | 56858472-G-A | ** | ||||||
3436409-T-A | 3568368-T-A | L1337 | FT232765 | ** | ||||
13271793-C-G | 11116117-C-G | ** | ||||||
7464063-G-A | 7596022-G-A | IR1_L | ** | |||||
14214957-C-T | 12094251-C-T | YSC0001258 PF3537 CTS2197 | ** | |||||
3550573-TC-T | 3682532-TC-T | ** | ||||||
4468316-C-A | 4600275-C-A | FT74871 | 12×A | ** | ||||
15323679-AG-A | 13211797-AG-A | ** | ||||||
22352474-G-A | 20190588-G-A | DYZ19 | ** | |||||
3559724-C-A | 3691683-C-A | FT247567 | ** | |||||
17428298-C-A | 15316418-C-A | FT301634 | ** | |||||
23425196-G-A | 21263310-G-A | CTS12022 | ** | |||||
58988977-C-A | 56842830-C-A | ** | ||||||
10019854-G-A | 10182245-G-A | BY95170 | FT165030 | ** | ||||
23009991-G-T | 20848105-G-T | ** | ||||||
25945002-GT-G | 23798855-GT-G | P1_Y1 | 16×T | ** | ||||
13446604-CCATCTCATTT-C | 11290928-CCATCTCATTT-C | ** | ||||||
3436398-G-C | 3568357-G-C | ** | ||||||
7723974-G-T | 7855933-G-T | ** | ||||||
22269696-G-T | 20107810-G-T | BY14336 | DYZ19 | ** | ||||
22244022-C-A | 20082136-C-A | DYZ19 | ** | |||||
5937238-C-A | 6069197-C-A | ** | ||||||
14294100-G-T | 12173394-G-T | ** | ||||||
13932895-C-A | 11812189-C-A | ** | ||||||
8977029-CAA-C | 9139420-CAA-C | 16×A | ** | |||||
10982317-T-TTACTTCAC | ** | |||||||
10982341-C-T | ** | |||||||
24904717-C-A | 22758570-C-A | g1 | ** | |||||
10792429-T-TTGCAC | ** | |||||||
11022093-C-T | ** | |||||||
16516137-C-T | 14404257-C-T | ** | ||||||
20447356-G-GA | 18285470-G-GA | P5_Dst | ** | |||||
13441576-TATA-T | 11285900-TATA-T | 5×ATA | ** | |||||
13442448-C-A | 11286772-C-A | ** | ||||||
13489416-G-C | 11333740-G-C | ** | ||||||
10755331-C-G | ** | |||||||
10840029-T-C | ** | |||||||
24634111-T-G | 22487964-T-G | P3_t2 | ** | |||||
26153993-G-T | 24007846-G-T | P1_Y1 | ** | |||||
16897625-C-A | 14785745-C-A | ** | ||||||
17367661-C-A | 15255781-C-A | ** | ||||||
4261774-C-A | 4393733-C-A | ** | ||||||
7250448-CA-C | 7382407-CA-C | 8×A | ** | |||||
10804794-C-A | ** | |||||||
11022187-C-A | ** | |||||||
11677002-G-T | ** | |||||||
13453374-C-A | 11297698-C-A | ** | ||||||
10842541-A-G | ** | |||||||
10792456-C-G | ** | |||||||
10792463-A-T | ** | |||||||
26415672-G-C | 24269525-G-C | P1_Y1 | ** | |||||
19847692-C-T | 17735812-C-T | P5_Prx | ** | |||||
7898678-C-A | 8030637-C-A | ** | ||||||
26415662-G-A | 24269515-G-A | P1_Y1 | ** | |||||
10982286-G-T | ** | |||||||
8776633-A-T | 8908592-A-T | ** | ||||||
56838753-G-T | ** | |||||||
18127662-C-A | 16015782-C-A | ** | ||||||
8124936-G-A | 8256895-G-A | ** | ||||||
25944976-A-T | 23798829-A-T | P1_Y1 | ** | |||||
56842829-T-C | ** | |||||||
56842837-C-A | ** | |||||||
10965571-T-A | ** | |||||||
10658191-C-A | ** | |||||||
21219708-C-A | 19057822-C-A | ** | ||||||
10993116-A-T | ** | |||||||
10880351-C-G | ** | |||||||
10880354-C-T | ** | |||||||
17151405-C-CT | 15039525-C-CT | 9×T | ** | |||||
13937341-C-A | 11816635-C-A | ** | ||||||
24904721-T-A | 22758574-T-A | g1 | ** | |||||
4244644-A-G | 4376603-A-G | ** | ||||||
10912817-A-G | ** | |||||||
2752704-T-G | 2884663-T-G | ** | ||||||
11022938-A-C | ** | |||||||
10685626-C-A | ** | |||||||
22882158-C-A | 20720272-C-A | ** | ||||||
9194593-C-A | 9356984-C-A | ** | ||||||
28780223-A-C | 26634076-A-C | ** | ||||||
24123747-T-C | 21977600-T-C | P3_b1 | ** | |||||
28229311-C-A | 26083164-C-A | P1_b4 | ** | |||||
11022066-T-A | ** | |||||||
13870406-A-T | 11749700-A-T | ** | ||||||
13937127-C-A | 11816421-C-A | ** | ||||||
10972540-T-C | ** | |||||||
10972542-A-G | ** | |||||||
10972547-T-A | ** | |||||||
10972552-T-A | ** | |||||||
10972557-C-T | ** | |||||||
14294106-G-C | 12173400-G-C | ** | ||||||
13856895-C-A | 11736189-C-A | ** | ||||||
4357406-C-A | 4489365-C-A | ** | ||||||
28479026-C-A | 26332879-C-A | ** | ||||||
10912947-A-G | ** | |||||||
18184918-C-A | 16073038-C-A | ** | ||||||
19125678-G-A | 17013798-G-A | ** | ||||||
10925615-C-G | ** | |||||||
16970-A-C | ** | |||||||
9123369-G-T | ** | |||||||
14187241-A-T | 12066535-A-T | ** | ||||||
21392355-A-C | 19230469-A-C | ** | ||||||
22133012-C-A | 19971126-C-A | ** | ||||||
19081322-C-A | 16969442-C-A | ** | ||||||
4256927-C-A | 4388886-C-A | ** | ||||||
19537888-C-A | 17426008-C-A | ** | ||||||
7420798-C-A | 7552757-C-A | ** | ||||||
4568534-G-T | 4700493-G-T | ** | ||||||
4968251-C-A | 5100210-C-A | ** | ||||||
7019054-AT-A | 7151013-AT-A | 8×T | ** | |||||
14667778-C-A | 12555843-C-A | ** | ||||||
18447656-A-T | 16335776-A-T | P6_Dst | ** | |||||
7664236-C-A | 7796195-C-A | ** | ||||||
11022168-C-T | ** | |||||||
22712943-C-A | 20551057-C-A | ** | ||||||
10652278-A-ATCACT | ** | |||||||
10652282-TGTC-T | ** | |||||||
10652288-C-T | ** | |||||||
10652303-T-C | ** | |||||||
22352458-G-A | 20190572-G-A | DYZ19 | ** | |||||
22548355-C-A | 20386469-C-A | ** | ||||||
8341778-G-A | 8473737-G-A | ** | ||||||
21388694-A-G | 19226808-A-G | ** | ||||||
6228202-T-TAC | 6360161-T-TAC | IR3_Dst | ** | |||||
14017723-C-A | 11897017-C-A | ** | ||||||
23317751-A-T | 21155865-A-T | ** | ||||||
10850549-A-C | ** | |||||||
10850571-A-G | ** | |||||||
10850578-T-A | ** | |||||||
10850587-T-C | ** | |||||||
10850592-T-C | ** | |||||||
10850594-C-CCAATT | ** | |||||||
13880159-C-A | 11759453-C-A | ** | ||||||
11022151-C-CATTCT | ** | |||||||
23004141-C-A | 20842255-C-A | ** | ||||||
10925044-A-T | ** | |||||||
17802123-T-A | 15690243-T-A | ** | ||||||
23361623-G-T | 21199737-G-T | ** | ||||||
14000389-T-G | 11879683-T-G | ** | ||||||
28561875-T-A | 26415728-T-A | ** | ||||||
21012161-A-T | 18850275-A-T | P4_Dst | ** | |||||
13453373-C-T | 11297697-C-T | ** | ||||||
7105158-C-T | 7237117-C-T | ** | ||||||
22809789-C-A | 20647903-C-A | ** | ||||||
14230260-C-A | 12109554-C-A | ** | ||||||
2986035-C-A | 3117994-C-A | ** | ||||||
11022911-C-A | ** | |||||||
4626258-C-A | 4758217-C-A | ** | ||||||
26328830-C-A | 24182683-C-A | P1_Y1 | ** | |||||
10982280-C-A | ** | |||||||
19745020-C-A | 17633140-C-A | P5_Prx | ** | |||||
19741021-C-G | 17629141-C-G | P5_Prx | ** | |||||
15882071-T-A | 13770191-T-A | ** | ||||||
18972118-C-A | 16860238-C-A | ** | ||||||
20677940-T-C | 18516054-T-C | P4_Prx | ** | |||||
5186472-G-T | 5318431-G-T | ** | ||||||
10912943-G-C | ** | |||||||
10804801-A-T | ** | |||||||
22172700-C-A | 20010814-C-A | ** | ||||||
10763172-A-T | ** | |||||||
10793154-C-T | ** | |||||||
13218019-C-A | 11062343-C-A | ** | ||||||
15396580-C-A | 13284700-C-A | ** | ||||||
14909525-C-A | 12797592-C-A | ** | ||||||
17546179-C-A | 15434299-C-A | ** | ||||||
28716391-C-A | 26570244-C-A | ** | ||||||
10652328-T-G | ** | |||||||
3684541-G-T | 3816500-G-T | ** | ||||||
10782942-A-T | ** | |||||||
11013247-C-G | ** | |||||||
7250470-T-C | 7382429-T-C | ** | ||||||
18278110-G-T | 16166230-G-T | P6_Prx | ** | |||||
9772022-C-A | 9934413-C-A | Y4377 | ** | |||||
17622671-G-T | 15510791-G-T | ** | ||||||
13996166-C-A | 11875460-C-A | ** | ||||||
17090722-C-A | 14978842-C-A | ** | ||||||
6357957-G-T | 6489916-G-T | ** | ||||||
13919228-C-CT | 11798522-C-CT | ** | ||||||
25944995-G-T | 23798848-G-T | P1_Y1 | ** | |||||
15106988-A-G | 12995075-A-G | FT69596 | ** | |||||
13828401-TGAATG-T | 11707695-TGAATG-T | ** | ||||||
14802945-C-A | 12691016-C-A | ** | ||||||
16886883-C-A | 14775003-C-A | ** | ||||||
7534604-C-A | 7666563-C-A | ** | ||||||
15011616-C-A | 12899704-C-A | ** | ||||||
5219188-G-T | 5351147-G-T | ** | ||||||
5323624-A-T | 5455583-A-T | ** | ||||||
27423564-A-T | 25277417-A-T | P1_g3 | ** | |||||
10925620-A-T | ** | |||||||
13196694-C-A | 11041018-C-A | ** | ||||||
13328837-C-A | 11173161-C-A | ** | ||||||
7695724-G-T | 7827683-G-T | ** | ||||||
19300427-C-A | 17188547-C-A | ** | ||||||
10804779-C-G | ** | |||||||
10804795-C-CA | ** | |||||||
10804797-T-TACTTTCTTG | ** | |||||||
10804816-A-T | ** | |||||||
15106924-C-G | 12995011-C-G | ** | ||||||
15832162-C-A | 13720282-C-A | ** | ||||||
7299711-A-C | 7431670-A-C | ** | ||||||
14362016-G-T | 12241311-G-T | ** | ||||||
23522608-C-A | 21360722-C-A | ** | ||||||
5359071-G-T | 5491030-G-T | ** | ||||||
7238333-C-A | 7370292-C-A | ** | ||||||
14544081-C-A | 12432282-C-A | ** | ||||||
14000577-C-A | 11879871-C-A | ** | ||||||
14168237-C-A | 12047531-C-A | ** | ||||||
14168242-A-G | 12047536-A-G | ** | ||||||
6816647-C-T | 6948606-C-T | ** | ||||||
13944668-C-A | 11823962-C-A | ** | ||||||
13937322-C-A | 11816616-C-A | ** | ||||||
15997378-C-A | 13885498-C-A | ** | ||||||
14714945-A-G | 12603012-A-G | ** | ||||||
10926858-C-A | ** | |||||||
10928472-C-A | ** | |||||||
11029770-C-A | ** | |||||||
10839992-C-T | ** | |||||||
10839989-T-G | ** | |||||||
11009059-C-A | ** | |||||||
14911957-C-A | 12800024-C-A | ** | ||||||
10678606-CCA-T | ** | |||||||
10678610-T-TAC | ** | |||||||
14146857-C-A | 12026151-C-A | ** | ||||||
13433296-A-C | 11277620-A-C | ** | ||||||
2681092-C-A | 2813051-C-A | ** | ||||||
2701420-G-T | 2833379-G-T | ** | ||||||
2744798-C-G | 2876757-C-G | ** | ||||||
2773943-G-A | 2905902-G-A | ** | ||||||
2790565-T-G | 2922524-T-G | ** | ||||||
2885484-G-T | 3017443-G-T | ** | ||||||
2906737-C-A | 3038696-C-A | ** | ||||||
2975572-C-T | 3107531-C-T | ** | ||||||
3093645-A-T | 3225604-A-T | ** | ||||||
3116563-A-G | 3248522-A-G | ** | ||||||
3148704-T-A | 3280663-T-A | ** | ||||||
3265240-T-G | 3397199-T-G | ** | ||||||
3265395-T-C | 3397354-T-C | ** | ||||||
3265439-G-C | 3397398-G-C | ** | ||||||
3274382-C-A | 3406341-C-A | ** | ||||||
3330305-G-T | 3462264-G-T | ** | ||||||
3343319-T-A | 3475278-T-A | ** | ||||||
3409179-A-T | 3541138-A-T | ** | ||||||
3610234-T-A | 3742193-T-A | ** | ||||||
3610342-T-C | 3742301-T-C | ** | ||||||
3622345-C-A | 3754304-C-A | ** | ||||||
3684524-A-G | 3816483-A-G | ** | ||||||
3684582-G-T | 3816541-G-T | ** | ||||||
3882379-C-T | 4014338-C-T | ** | ||||||
4008803-C-A | 4140762-C-A | ** | ||||||
4070681-T-C | 4202640-T-C | ** | ||||||
4088555-C-A | 4220514-C-A | ** | ||||||
4117687-C-A | 4249646-C-A | ** | ||||||
4143981-G-A | 4275940-G-A | ** | ||||||
4154022-C-A | 4285981-C-A | ** | ||||||
4167812-G-T | 4299771-G-T | ** | ||||||
4209026-A-G | 4340985-A-G | ** | ||||||
4224534-A-G | 4356493-A-G | ** | ||||||
4243729-C-A | 4375688-C-A | ** | ||||||
4287930-A-G | 4419889-A-G | ** | ||||||
4370978-C-A | 4502937-C-A | ** | ||||||
4388065-C-T | 4520024-C-T | FTA4148 | ** | |||||
4468408-G-T | 4600367-G-T | ** | ||||||
4468431-A-G | 4600390-A-G | ** | ||||||
4502085-T-G | 4634044-T-G | ** | ||||||
4502929-C-T | 4634888-C-T | ** | ||||||
4700922-G-T | 4832881-G-T | ** | ||||||
4757724-T-C | 4889683-T-C | ** | ||||||
4773133-G-T | 4905092-G-T | ** | ||||||
4840163-C-A | 4972122-C-A | ** | ||||||
4908260-C-A | 5040219-C-A | ** | ||||||
4929363-C-A | 5061322-C-A | ** | ||||||
4958343-G-T | 5090302-G-T | ** | ||||||
4960165-G-T | 5092124-G-T | ** | ||||||
5141486-G-T | 5273445-G-T | ** | ||||||
5189143-A-T | 5321102-A-T | ** | ||||||
5199646-C-A | 5331605-C-A | ** | ||||||
5216367-C-A | 5348326-C-A | ** | ||||||
5219324-A-G | 5351283-A-G | ** | ||||||
5235422-T-TC | 5367381-T-TC | ** | ||||||
5246218-C-A | 5378177-C-A | ** | ||||||
5313549-C-A | 5445508-C-A | ** | ||||||
5338719-A-G | 5470678-A-G | ** | ||||||
5367080-T-A | 5499039-T-A | ** | ||||||
5448575-T-G | 5580534-T-G | ** | ||||||
5448682-A-G | 5580641-A-G | ** | ||||||
5577393-A-T | 5709352-A-T | ** | ||||||
5657885-G-T | 5789844-G-T | ** | ||||||
5702205-T-A | 5834164-T-A | ** | ||||||
5755093-C-A | 5887052-C-A | ** | ||||||
6149745-G-T | 6281704-G-T | FTB43078 | IR3_Dst | ** | ||||
6354508-C-A | 6486467-C-A | ** | ||||||
6374192-A-C | 6506151-A-C | ** | ||||||
6401760-T-A | 6533719-T-A | ** | ||||||
6485496-T-C | 6617455-T-C | ** | ||||||
6485505-A-T | 6617464-A-T | ** | ||||||
6490821-C-A | 6622780-C-A | ** | ||||||
6505651-A-G | 6637610-A-G | ** | ||||||
6505709-T-C | 6637668-T-C | ** | ||||||
6516736-T-C | 6648695-T-C | ** | ||||||
6692778-T-A | 6824737-T-A | ** | ||||||
6772122-T-G | 6904081-T-G | ** | ||||||
6816594-T-C | 6948553-T-C | ** | ||||||
7003928-A-G | 7135887-A-G | ** | ||||||
7013638-A-C | 7145597-A-C | ** | ||||||
7081641-A-G | 7213600-A-G | ** | ||||||
7102610-C-A | 7234569-C-A | ** | ||||||
7105166-A-G | 7237125-A-G | ** | ||||||
7123647-A-C | 7255606-A-C | ** | ||||||
7123699-A-G | 7255658-A-G | ** | ||||||
7123714-T-C | 7255673-T-C | ** | ||||||
7154785-G-A | 7286744-G-A | ** | ||||||
7154790-T-C | 7286749-T-C | ** | ||||||
7154907-C-A | 7286866-C-A | ** | ||||||
7182886-G-A | 7314845-G-A | ** | ||||||
7250459-A-G | 7382418-A-G | ** | ||||||
7299738-G-T | 7431697-G-T | ** | ||||||
7384775-A-G | 7516734-A-G | ** | ||||||
7436324-C-A | 7568283-C-A | ** | ||||||
7664796-C-A | 7796755-C-A | ** | ||||||
7723987-G-T | 7855946-G-T | ** | ||||||
7764402-A-G | 7896361-A-G | ** | ||||||
7871455-C-A | 8003414-C-A | ** | ||||||
8008021-G-T | 8139980-G-T | ** | ||||||
8061805-C-T | 8193764-C-T | ** | ||||||
8293880-T-C | 8425839-T-C | ** | ||||||
8379711-G-A | 8511670-G-A | ** | ||||||
8691909-G-A | 8823868-G-A | ** | ||||||
8698827-T-A | 8830786-T-A | ** | ||||||
8699818-C-A | 8831777-C-A | ** | ||||||
8850070-C-A | 8982029-C-A | ** | ||||||
8913024-G-T | 9044983-G-T | ** | ||||||
9184133-G-A | 9346524-G-A | ** | ||||||
9380231-C-A | 9542622-C-A | ** | ||||||
9506945-A-T | 9669336-A-T | ** | ||||||
9511860-A-G | 9674251-A-G | ** | ||||||
9697288-C-G | 9859679-C-G | IR3_Prx | ** | |||||
9900278-C-T | 10062669-C-T | ** | ||||||
9925277-T-G | 10087668-T-G | ** | ||||||
9943443-G-C | 10105834-G-C | ** | ||||||
9958075-G-A | 10120466-G-A | ** | ||||||
9958109-C-G | 10120500-C-G | ** | ||||||
9973531-C-T | 10135922-C-T | ** | ||||||
9996561-T-C | 10158952-T-C | ** | ||||||
10019853-G-T | 10182244-G-T | ** | ||||||
10651441-T-G | ** | |||||||
10653708-C-A | ** | |||||||
10654723-T-C | ** | |||||||
10673821-T-C | ** | |||||||
10678613-C-T | ** | |||||||
10749882-A-C | ** | |||||||
10763153-T-TCCCAA | ** | |||||||
10763576-C-A | ** | |||||||
10779072-AT-A | ** | |||||||
10782891-C-T | ** | |||||||
10783021-C-A | ** | |||||||
10828768-C-T | FT32909 | ** | ||||||
10832340-A-T | ** | |||||||
10839948-A-ACTTGT | ** | |||||||
10839972-C-T | ** | |||||||
10839977-C-T | ** | |||||||
10839983-A-C | ** | |||||||
10839991-C-T | ** | |||||||
10840032-C-A | ** | |||||||
10841068-A-T | ** | |||||||
10883711-C-T | ** | |||||||
10890233-A-T | ** | |||||||
10896232-T-C | ** | |||||||
10899788-G-A | ** | |||||||
10899908-T-G | ** | |||||||
10925021-T-TCCACG | ** | |||||||
10925569-AACTCTACTCT-A | ** | |||||||
10928464-G-T | ** | |||||||
10929292-G-A | ** | |||||||
10942748-T-G | ** | |||||||
10967859-A-G | ** | |||||||
10969660-C-A | ** | |||||||
10979661-G-T | ** | |||||||
10979679-G-C | ** | |||||||
10980330-C-T | ** | |||||||
10983516-CATGGCACTG-C | ** | |||||||
10993075-A-C | ** | |||||||
11013223-C-T | ** | |||||||
11013224-A-ACTCTGGTGGT | ** | |||||||
11013231-TCC-T | ** | |||||||
11013272-A-G | ** | |||||||
11014720-C-A | ** | |||||||
11014725-TTGCAC-T | ** | |||||||
11014734-T-C | ** | |||||||
11014740-C-A | FT393713 | ** | ||||||
11014747-G-C | ** | |||||||
11014776-C-A | ** | |||||||
11017562-C-A | ** | |||||||
11028283-G-C | ** | |||||||
13428437-G-T | 11272761-G-T | ** | ||||||
13460227-A-T | 11304551-A-T | ** | ||||||
13565512-A-G | 11409836-A-G | ** | ||||||
13587788-C-T | 11432112-C-T | ** | ||||||
13597919-G-A | 11442243-G-A | ** | ||||||
13601969-T-C | 11446293-T-C | ** | ||||||
13603210-C-A | 11447534-C-A | ** | ||||||
13625266-G-A | 11469590-G-A | ** | ||||||
13625274-A-C | 11469598-A-C | ** | ||||||
13625295-T-A | 11469619-T-A | ** | ||||||
13625303-C-G | 11469627-C-G | ** | ||||||
13641067-T-G | 11485391-T-G | ** | ||||||
13641184-T-A | 11485508-T-A | ** | ||||||
13643567-C-A | 11487891-C-A | ** | ||||||
11644846-T-G | ** | |||||||
11646071-T-G | ** | |||||||
11650245-T-C | ** | |||||||
11666279-A-G | ** | |||||||
13800720-A-T | 11680014-A-T | ** | ||||||
13870384-C-A | 11749678-C-A | ** | ||||||
13875540-C-T | 11754834-C-T | ** | ||||||
13882240-A-T | 11761534-A-T | ** | ||||||
13884838-T-G | 11764132-T-G | ** | ||||||
13895845-C-A | 11775139-C-A | ** | ||||||
13898971-T-A | 11778265-T-A | ** | ||||||
13902826-C-A | 11782120-C-A | ** | ||||||
13919691-G-A | 11798985-G-A | ** | ||||||
13928854-C-T | 11808148-C-T | ** | ||||||
13935126-T-A | 11814420-T-A | ** | ||||||
13937894-A-C | 11817188-A-C | ** | ||||||
13938010-C-T | 11817304-C-T | FT29592 | ** | |||||
13939081-A-C | 11818375-A-C | FT76119 | ** | |||||
13940551-C-A | 11819845-C-A | ** | ||||||
13942240-C-A | 11821534-C-A | ** | ||||||
13965455-C-A | 11844749-C-A | ** | ||||||
13984237-T-G | 11863531-T-G | ** | ||||||
13984279-C-G | 11863573-C-G | ** | ||||||
13984290-G-A | 11863584-G-A | ** | ||||||
13984331-T-C | 11863625-T-C | ** | ||||||
14041051-C-T | 11920345-C-T | ** | ||||||
14076890-C-A | 11956184-C-A | ** | ||||||
14187224-T-C | 12066518-T-C | ** | ||||||
14240281-C-A | 12119575-C-A | ** | ||||||
14294102-G-T | 12173396-G-T | ** | ||||||
14351148-T-C | 12230443-T-C | ** | ||||||
14352125-C-A | 12231420-C-A | ** | ||||||
14372180-G-A | 12251476-G-A | ** | ||||||
14385574-G-T | 12264870-G-T | ** | ||||||
14431461-C-T | 12310734-C-T | ** | ||||||
14432045-C-A | 12311318-C-A | ** | ||||||
14432055-T-G | 12311328-T-G | ** | ||||||
14442905-C-A | 12322178-C-A | ** | ||||||
14445556-T-A | 12324829-T-A | ** | ||||||
14468352-T-A | 12347621-T-A | ** | ||||||
14514706-C-A | 12402911-C-A | ** | ||||||
14518458-C-A | 12406659-C-A | ** | ||||||
14518848-G-C | 12407049-G-C | ** | ||||||
14524016-T-C | 12412217-T-C | ** | ||||||
14526452-C-A | 12414653-C-A | ** | ||||||
14589332-T-G | 12477532-T-G | ** | ||||||
14735121-C-T | 12623189-C-T | ** | ||||||
14792832-A-G | 12680903-A-G | ** | ||||||
14909141-G-T | 12797208-G-T | ** | ||||||
14910994-C-A | 12799061-C-A | ** | ||||||
15011549-G-C | 12899637-G-C | ** | ||||||
15049361-C-A | 12937452-C-A | ** | ||||||
15106923-T-G | 12995010-T-G | ** | ||||||
15106930-A-G | 12995017-A-G | ** | ||||||
15106990-T-G | 12995077-T-G | ** | ||||||
15131945-G-T | 13020032-G-T | ** | ||||||
15171461-C-G | 13059547-C-G | ** | ||||||
15171488-A-T | 13059574-A-T | ** | ||||||
15172751-A-T | 13060837-A-T | ** | ||||||
15333941-G-T | 13222059-G-T | ** | ||||||
15392548-C-T | 13280668-C-T | FT117073 | ** | |||||
15400087-G-T | 13288207-G-T | ** | ||||||
15574897-C-A | 13463017-C-A | ** | ||||||
15576624-G-T | 13464744-G-T | ** | ||||||
15576781-A-C | 13464901-A-C | ** | ||||||
15606538-G-C | 13494658-G-C | ** | ||||||
15687815-C-T | 13575935-C-T | ** | ||||||
15714316-G-A | 13602436-G-A | ** | ||||||
15741285-G-T | 13629405-G-T | ** | ||||||
15742092-G-T | 13630212-G-T | ** | ||||||
15921291-A-G | 13809411-A-G | ** | ||||||
15924001-C-A | 13812121-C-A | ** | ||||||
15969845-T-G | 13857965-T-G | ** | ||||||
16001794-GT-G | 13889914-GT-G | ** | ||||||
16021042-T-A | 13909162-T-A | ** | ||||||
16021146-C-T | 13909266-C-T | FT96642 | ** | |||||
16033518-A-G | 13921638-A-G | ** | ||||||
16038017-C-A | 13926137-C-A | ** | ||||||
16047230-G-T | 13935350-G-T | ** | ||||||
16063638-T-G | 13951758-T-G | ** | ||||||
16197371-C-A | 14085491-C-A | ** | ||||||
16218068-T-G | 14106188-T-G | ** | ||||||
16270714-T-A | 14158834-T-A | ** | ||||||
16270762-C-T | 14158882-C-T | ** | ||||||
16270830-G-T | 14158950-G-T | ** | ||||||
16279499-G-C | 14167619-G-C | ** | ||||||
16344674-T-A | 14232794-T-A | ** | ||||||
16354953-G-T | 14243073-G-T | ** | ||||||
16405532-C-A | 14293652-C-A | ** | ||||||
16572754-A-G | 14460874-A-G | ** | ||||||
16573782-T-C | 14461902-T-C | ** | ||||||
16573854-C-A | 14461974-C-A | ** | ||||||
16618704-T-A | 14506824-T-A | ** | ||||||
16679426-G-A | 14567546-G-A | ** | ||||||
16707317-A-G | 14595437-A-G | ** | ||||||
16848553-C-A | 14736673-C-A | ** | ||||||
16897665-A-G | 14785785-A-G | ** | ||||||
16975107-C-A | 14863227-C-A | ** | ||||||
17152749-T-C | 15040869-T-C | ** | ||||||
17159048-C-A | 15047168-C-A | ** | ||||||
17165469-A-T | 15053589-A-T | FT347265 | ** | |||||
17211264-A-C | 15099384-A-C | ** | ||||||
17211312-A-C | 15099432-A-C | FTB41587 | ** | |||||
17212237-A-G | 15100357-A-G | ** | ||||||
17265624-G-A | 15153744-G-A | ** | ||||||
17317458-T-A | 15205578-T-A | ** | ||||||
17346306-C-A | 15234426-C-A | ** | ||||||
17519401-G-T | 15407521-G-T | ** | ||||||
17561605-C-A | 15449725-C-A | ** | ||||||
17568421-G-A | 15456541-G-A | ** | ||||||
17584182-A-G | 15472302-A-G | ** | ||||||
17622131-C-G | 15510251-C-G | ** | ||||||
17622629-C-A | 15510749-C-A | ** | ||||||
17622695-T-A | 15510815-T-A | ** | ||||||
17622726-C-T | 15510846-C-T | ** | ||||||
17737848-C-A | 15625968-C-A | ** | ||||||
17802131-C-A | 15690251-C-A | ** | ||||||
17928587-C-A | 15816707-C-A | ** | ||||||
17951494-C-A | 15839614-C-A | ** | ||||||
18006593-G-T | 15894713-G-T | P7_Gap | ** | |||||
18183890-A-G | 16072010-A-G | ** | ||||||
18185256-C-A | 16073376-C-A | ** | ||||||
18194272-C-A | 16082392-C-A | ** | ||||||
18196489-TCAA-T | 16084609-TCAA-T | ** | ||||||
18325728-T-A | 16213848-T-A | P6_Prx | ** | |||||
18343820-C-A | 16231940-C-A | P6_Prx | ** | |||||
18401258-C-A | 16289378-C-A | P6_Gap | ** | |||||
18425308-C-A | 16313428-C-A | P6_Gap | ** | |||||
18630571-A-C | 16518691-A-C | ** | ||||||
18707263-C-A | 16595383-C-A | ** | ||||||
18710436-T-G | 16598556-T-G | ** | ||||||
18730518-T-C | 16618638-T-C | ** | ||||||
18767851-T-A | 16655971-T-A | ** | ||||||
18768357-AAAAT-A | 16656477-AAAAT-A | 4×AAAT | ** | |||||
19075379-C-A | 16963499-C-A | ** | ||||||
19127683-C-A | 17015803-C-A | ** | ||||||
19274819-T-G | 17162939-T-G | ** | ||||||
19532882-A-T | 17421002-A-T | ** | ||||||
19537898-T-C | 17426018-T-C | ** | ||||||
19537899-C-A | 17426019-C-A | ** | ||||||
19551779-T-A | 17439899-T-A | ** | ||||||
19551803-G-A | 17439923-G-A | ** | ||||||
19690304-G-A | 17578424-G-A | P5_Prx | ** | |||||
19755061-G-T | 17643181-G-T | P5_Prx | ** | |||||
19758723-T-A | 17646843-T-A | P5_Prx | ** | |||||
19758750-T-G | 17646870-T-G | P5_Prx | ** | |||||
19758784-T-G | 17646904-T-G | P5_Prx | ** | |||||
19758801-T-TA | 17646921-T-TA | P5_Prx | ** | |||||
19795119-G-A | 17683239-G-A | P5_Prx | ** | |||||
19795142-ATC-A | 17683262-ATC-A | P5_Prx | ** | |||||
19795188-C-A | 17683308-C-A | P5_Prx | ** | |||||
19844952-C-T | 17733072-C-T | P5_Prx | ** | |||||
20027908-A-C | 17916028-A-C | P5_Prx | ** | |||||
20242491-G-A | 18080605-G-A | P5_Dst | ** | |||||
20473372-A-T | 18311486-A-T | P5_Dst | ** | |||||
20768447-T-A | 18606561-T-A | P4_Prx | ** | |||||
20809725-G-C | 18647839-G-C | P4_Gap | ** | |||||
21069983-A-T | 18908097-A-T | ** | ||||||
21070006-A-C | 18908120-A-C | ** | ||||||
21153392-T-C | 18991506-T-C | ** | ||||||
21335957-CA-C | 19174071-CA-C | ** | ||||||
21348414-T-C | 19186528-T-C | FT91320 | ** | |||||
21391668-TG-T | 19229782-TG-T | ** | ||||||
21392345-G-T | 19230459-G-T | ** | ||||||
21495543-T-A | 19333657-T-A | ** | ||||||
21495548-A-T | 19333662-A-T | ** | ||||||
21495622-G-C | 19333736-G-C | ** | ||||||
21596902-C-A | 19435016-C-A | ** | ||||||
21658604-T-A | 19496718-T-A | ** | ||||||
21665631-G-T | 19503745-G-T | ** | ||||||
21770228-T-C | 19608342-T-C | ** | ||||||
21786519-T-G | 19624633-T-G | ** | ||||||
21863915-G-A | 19702029-G-A | ** | ||||||
21912271-T-C | 19750385-T-C | ** | ||||||
21956845-T-C | 19794959-T-C | ** | ||||||
21969251-CAT-C | 19807365-CAT-C | ** | ||||||
22080656-C-A | 19918770-C-A | ** | ||||||
22085352-G-T | 19923466-G-T | ** | ||||||
22097283-A-C | 19935397-A-C | ** | ||||||
22167906-T-A | 20006020-T-A | ** | ||||||
22199314-T-C | 20037428-T-C | ** | ||||||
22295050-C-T | 20133164-C-T | DYZ19 | ** | |||||
22520612-C-T | 20358726-C-T | ** | ||||||
22520613-C-T | 20358727-C-T | ** | ||||||
22537011-T-A | 20375125-T-A | ** | ||||||
22602455-C-A | 20440569-C-A | ** | ||||||
22689939-A-C | 20528053-A-C | ** | ||||||
22768171-C-G | 20606285-C-G | ** | ||||||
22811726-A-C | 20649840-A-C | ** | ||||||
22811753-G-C | 20649867-G-C | ** | ||||||
22853970-C-A | 20692084-C-A | ** | ||||||
22880705-A-T | 20718819-A-T | ** | ||||||
22899875-T-C | 20737989-T-C | ** | ||||||
23009028-C-A | 20847142-C-A | ** | ||||||
23039367-G-A | 20877481-G-A | ** | ||||||
23039406-T-C | 20877520-T-C | ** | ||||||
23047740-C-A | 20885854-C-A | ** | ||||||
23097068-G-T | 20935182-G-T | ** | ||||||
23198433-T-A | 21036547-T-A | ** | ||||||
23231567-T-A | 21069681-T-A | ** | ||||||
23421081-T-A | 21259195-T-A | ** | ||||||
23434209-T-C | 21272323-T-C | ** | ||||||
25508324-T-A | 23362177-T-A | P1_gr1 | ** | |||||
25592969-T-C | 23446822-T-C | P1_gr1 | ** | |||||
25876643-G-T | 23730496-G-T | P1_Y1 | ** | |||||
25966247-T-TC | 23820100-T-TC | P1_Y1 | ** | |||||
25994016-A-C | 23847869-A-C | P1_Y1 | ** | |||||
25994019-A-AC | 23847872-A-AC | P1_Y1 | ** | |||||
26043781-G-T | 23897634-G-T | P1_Y1 | ** | |||||
26043789-T-TC | 23897642-T-TC | P1_Y1 | ** | |||||
26074532-AT-A | 23928385-AT-A | P1_Y1 | ** | |||||
27570845-T-TA | 25424698-T-TA | P1_Y2 | ** | |||||
27607857-G-T | 25461710-G-T | P1_Y2 | ** | |||||
27665395-T-A | 25519248-T-A | P1_Y2 | ** | |||||
27665395-T-TGC | 25519248-T-TGC | P1_Y2 | ** | |||||
27815765-C-T | 25669618-C-T | P1_Y2 | ** | |||||
27967306-A-G | 25821159-A-G | P1_Y2 | ** | |||||
28007941-T-G | 25861794-T-G | P1_Y2 | ** | |||||
28007999-T-G | 25861852-T-G | P1_Y2 | ** | |||||
28008037-A-AT | 25861890-A-AT | P1_Y2 | ** | |||||
28234524-G-A | 26088377-G-A | P1_b4 | ** | |||||
28370085-C-G | 26223938-C-G | P1_gr2 | ** | |||||
28492460-G-A | 26346313-G-A | ** | ||||||
28546683-T-C | 26400536-T-C | ** | ||||||
28561856-C-T | 26415709-C-T | ** | ||||||
28561864-T-A | 26415717-T-A | ** | ||||||
28593767-A-C | 26447620-A-C | ** | ||||||
28642724-C-A | 26496577-C-A | ** | ||||||
28660923-C-A | 26514776-C-A | ** | ||||||
28756158-A-G | 26610011-A-G | ** | ||||||
28756203-T-A | 26610056-T-A | ** | ||||||
16965-T-A | ** | |||||||
13467201-G-T | 11311525-G-T | *** | ||||||
13478229-T-A | 11322553-T-A | *** | ||||||
15993683-A-G | 13881803-A-G | BY12313 | BY12338 | *** | ||||
19409417-G-A | 17297537-G-A | *** | ||||||
17277418-C-A | 15165538-C-A | Y6057 | 4×ATAA | *** | ||||
13457973-CTCCGTTCCGT-C | 11302297-CTCCGTTCCGT-C | 7×TCCGT | *** | |||||
13461075-A-G | 11305399-A-G | *** | ||||||
10984501-A-G,T | *** | |||||||
10880304-T-A | *** | |||||||
10880316-C-T | *** | |||||||
10880317-C-G | *** | |||||||
10657297-T-A | *** | |||||||
10984479-T-A | *** | |||||||
10984495-A-T | *** | |||||||
10984502-A-G | *** | |||||||
3148457-G-T | 3280416-G-T | *** | ||||||
5459357-C-A | 5591316-C-A | *** | ||||||
56833308-TGCCAT-C,CTCTAC | *** | |||||||
13457730-C-T | 11302054-C-T | *** | ||||||
25995052-TATAC-T,TAC | 23848905-TATAC-T,TAC | P1_Y1 | *** | |||||
6384136-CT-C | 6516095-CT-C | 9×T | *** | |||||
22881413-C-A | 20719527-C-A | *** | ||||||
56844182-G-T | *** | |||||||
10657299-C-T | *** | |||||||
8911921-G-T | 9043880-G-T | *** | ||||||
15364058-T-C | 13252178-T-C | *** | ||||||
15336704-T-A | 13224822-T-A | *** | ||||||
15859455-G-T | 13747575-G-T | *** | ||||||
13473989-C-A | 11318313-C-A | *** | ||||||
13453387-T-A | 11297711-T-A | *** | ||||||
10682556-C-T | *** | |||||||
21189660-C-A | 19027774-C-A | *** | ||||||
8571150-CAAAA-C,CA | 8703109-CAAAA-C,CA | 14×A | *** | |||||
23315734-G-T | 21153848-G-T | *** | ||||||
10801689-T-G | *** | |||||||
6792660-G-A | 6924619-G-A | *** | ||||||
10801682-C-CGGAAG | *** | |||||||
21549206-C-T | 19387320-C-T | *** | ||||||
23011088-T-C | 20849202-T-C | *** | ||||||
5562429-C-A | 5694388-C-A | *** | ||||||
6930101-G-T | 7062060-G-T | *** | ||||||
7166768-C-A | 7298727-C-A | *** | ||||||
8760517-CTTTTT-C,CTTTTTT | 8892476-CTTTTT-C,CTTTTTT | 20×T | *** | |||||
9927032-C-A | 10089423-C-A | *** | ||||||
10753832-T-C | *** | |||||||
13453329-C-G | 11297653-C-G | *** | ||||||
13465941-A-C | 11310265-A-C | *** | ||||||
13465948-AG-A | 11310272-AG-A | *** | ||||||
13465961-G-T | 11310285-G-T | *** | ||||||
13489046-T-C | 11333370-T-C | *** | ||||||
14195008-A-G | 12074302-A-G | *** | ||||||
14385633-T-C | 12264929-T-C | *** | ||||||
15772538-C-T | 13660658-C-T | *** | ||||||
16272113-G-T | 14160233-G-T | *** | ||||||
17246544-A-T | 15134664-A-T | *** | ||||||
17755368-C-A | 15643488-C-A | *** | ||||||
17997305-G-A | 15885425-G-A | P7_Gap | *** | |||||
18748725-A-C | 16636845-A-C | *** | ||||||
19436742-G-GAA | 17324862-G-GAA | *** | ||||||
23773439-C-T | 21611553-C-T | *** | ||||||
26153962-GA-G,GAA | 24007815-GA-G,GAA | P1_Y1 | 15×A | *** | ||||
28798948-TG-T | 26652801-TG-T | *** | ||||||
24315-A-T | *** | |||||||
30635-T-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.