Hague

BigY3: 740966, BigY2: 740966
MDKA Birth: United States > Pennsylvania

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > FGC11134 > FGC12055 > A353 > Z3026 > Z16250 > A114 > CTS4466/S1136 > S1115 > Z3023 > FGC84010 > A541 > A151 > Z17986 > A661 > b38:7756198-T-A

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

Position Blocks Names Region McDonald BED combBED STRBigY3
740966		BigY2
740966
hg19:Y:20277555-T-G hg38:Y:18115669-T-G P5_Dst A+
hg19:Y:27883325-C-CA hg38:Y:25737178-C-CA P1_Y2 14×AA*
hg19:Y:22280213-G-T hg38:Y:20118327-G-T BY402 DYZ19 A*
hg19:Y:13661287-A-C hg38:Y:11505611-A-C DYZ17 A*
hg19:Y:9626172-C-CA hg38:Y:9788563-C-CA IR3_Prx 10×AA*
hg19:Y:18320177-G-A hg38:Y:16208297-G-A P6_Prx A*A*
hg19:Y:28816772-G-T hg38:Y:26670625-G-T A*A*
hg19:Y:6019744-A-AT hg38:Y:6151703-A-AT 11×TA*
hg19:Y:25960382-T-G hg38:Y:23814235-T-G P1_Y1 A*
hg19:Y:16150095-C-CT hg38:Y:14038215-C-CT P8_Dst 22×TA*
hg19:Y:25573225-G-A hg38:Y:23427078-G-A P1_gr1 A*
hg19:Y:8258476-C-T hg38:Y:8390435-C-T BY71215 YY++
hg38:Y:11664506-G-A FT450849 DYZ17 +**
hg19:Y:14215528-C-A hg38:Y:12094822-C-A BY93960 YY++
hg19:Y:15309056-G-T hg38:Y:13197160-G-T BY100725 YY++
hg19:Y:19195424-GTC-G hg38:Y:17083544-GTC-G ++
hg19:Y:21397686-A-G hg38:Y:19235800-A-G FT182062 YY++
hg19:Y:22458223-C-T hg38:Y:20296337-C-T BY220072 DYZ19 ++
hg19:Y:23984206-C-T hg38:Y:21838059-C-T BY149007 Y++
hg19:Y:24472198-T-G hg38:Y:22326051-T-G BY150198 Y++
hg38:Y2:13206-TG-T ++
hg38:Y:21751469-G-A FT94777 +
hg19:Y:13867986-TAATGG-T hg38:Y:11747280-TAATGG-T DYZ17 10×AATGG**
hg19:Y:28587793-T-A hg38:Y:26441646-T-A *
hg19:Y:58986528-T-C hg38:Y:56840381-T-C *
hg38:Y:10748250-A-ACCATT *
hg38:Y:10754934-CTCCATTCCAT-C *
hg19:Y:22340806-C-T hg38:Y:20178920-C-T DYZ19 **
hg19:Y:3793929-T-A hg38:Y:3925888-T-A *
hg19:Y:5943540-CTCT-C hg38:Y:6075499-CTCT-C *
hg19:Y:20326007-C-CTT hg38:Y:18164121-C-CTT P5_Dst 29×T**
hg19:Y:27370827-GA-G hg38:Y:25224680-GA-G P1_g3 11×A**
hg19:Y:17475195-C-T hg38:Y:15363315-C-T **
hg19:Y:58985626-G-A hg38:Y:56839479-G-A **
hg19:Y:20705130-G-T hg38:Y:18543244-G-T P4_Prx **
hg19:Y:14364239-C-A hg38:Y:12243534-C-A BY95226 **
hg19:Y:13482068-A-T hg38:Y:11326392-A-T **
hg19:Y:13206784-CA-C hg38:Y:11051108-CA-C 14×A**
hg38:Y:11025106-C-T **
hg38:Y:10798135-T-C **
hg38:Y:10798159-G-CT **
hg38:Y:10798164-G-C **
hg38:Y:10798167-A-G **
hg38:Y:10798174-G-T **
hg38:Y:10798188-G-A **
hg19:Y:16874910-C-A hg38:Y:14763030-C-A **
hg38:Y:10934725-CCGTTT-C **
hg38:Y:10764540-ATG-A **
hg38:Y:10764546-TTTTC-T **
hg38:Y:11643832-T-A DYZ17 **
hg19:Y:6697192-C-A hg38:Y:6829151-C-A **
hg38:Y:10973810-G-A **
hg38:Y:10689079-A-T **
hg38:Y:10884936-G-C **
hg38:Y:10880364-T-A **
hg19:Y:15290354-C-A hg38:Y:13178453-C-A **
hg19:Y:9993383-C-A hg38:Y:10155774-C-A **
hg19:Y:21412261-CT-C hg38:Y:19250375-CT-C 36×T**
hg38:Y:10764513-C-G **
hg38:Y:10764545-A-C **
hg38:Y:10842513-TC-T **
hg19:Y:15044299-C-A hg38:Y:12932389-C-A **
hg38:Y:10827917-T-C **
hg38:Y:10827924-C-G **
hg38:Y:10827927-T-A **
hg38:Y:10827935-C-A **
hg38:Y:10827942-T-A **
hg38:Y:10825305-C-G **
hg38:Y:10764560-C-G **
hg38:Y:10764566-A-G **
hg38:Y:10688231-A-T **
hg38:Y:10688237-CT-C **
hg38:Y:10688241-ACTGC-A **
hg38:Y:10912193-C-A **
hg19:Y:24300815-T-TG hg38:Y:22154668-T-TG P3_t1 **
hg38:Y:10912423-A-G **
hg19:Y:5426365-CTTT-C hg38:Y:5558324-CTTT-C 16×T**
hg38:Y:10658256-C-A **
hg38:Y:10658257-C-CATTCA **
hg19:Y:19293769-TCA-T hg38:Y:17181889-TCA-T **
hg38:Y:10984539-C-G **
hg19:Y:20496948-A-C hg38:Y:18335062-A-C P5_Dst **
hg38:Y:10842518-T-TC **
hg38:Y:10973816-T-C **
hg38:Y:10973818-C-T **
hg38:Y:10973820-A-G **
hg38:Y:10973821-T-C **
hg19:Y:14294334-C-A hg38:Y:12173628-C-A **
hg38:Y:10781129-C-T **
hg38:Y:10781137-A-C **
hg38:Y:11028121-G-T **
hg19:Y:14558006-G-T hg38:Y:12446207-G-T **
hg38:Y:11028152-C-T **
hg38:Y:11028186-A-G **
hg38:Y:10884947-T-C **
hg38:Y:10847114-T-TCA **
hg38:Y:10903490-A-T **
hg38:Y:10903497-C-G **
hg38:Y:10903501-C-G **
hg38:Y:10903521-A-C **
hg38:Y:10903526-A-G **
hg19:Y:13472220-C-G hg38:Y:11316544-C-G **
hg19:Y:13472228-AC-A hg38:Y:11316552-AC-A **
hg38:Y:10655063-C-A **
hg19:Y:14473738-C-CAA hg38:Y:12353007-C-CAA 14×A**
hg19:Y:13940950-A-C hg38:Y:11820244-A-C **
hg19:Y:21084437-ATT-A hg38:Y:18922551-ATT-A 12×T**
hg19:Y:22739715-TC-T hg38:Y:20577829-TC-T **
hg19:Y:5221043-C-T hg38:Y:5353002-C-T 14×T**
hg19:Y:27637331-C-A hg38:Y:25491184-C-A P1_Y2 **
hg19:Y:17597744-G-T hg38:Y:15485864-G-T 14×A**
hg19:Y:2766688-A-AT hg38:Y:2898647-A-AT 9×T**
hg19:Y:7935702-G-A hg38:Y:8067661-G-A FT93891 **
hg38:Y:11028144-C-T **
hg38:Y:10658222-A-C **
hg19:Y:15381274-C-A hg38:Y:13269394-C-A **
hg19:Y:27370850-T-A hg38:Y:25224703-T-A P1_g3 **
hg19:Y:19286405-CAA-C hg38:Y:17174525-CAA-C 11×A**
hg38:Y:10912151-C-G **
hg38:Y:10912153-A-C **
hg38:Y:10912180-T-A **
hg38:Y:10912189-G-A **
hg38:Y:10912197-AC-A **
hg19:Y:5186885-C-A hg38:Y:5318844-C-A **
hg38:Y:10798127-T-C **
hg19:Y:19967075-A-C hg38:Y:17855195-A-C P5_Prx **
hg19:Y:19967080-C-T hg38:Y:17855200-C-T P5_Prx **
hg19:Y:13891002-C-A hg38:Y:11770296-C-A **
hg19:Y:7935704-C-A hg38:Y:8067663-C-A **
hg19:Y:18636785-AT-A hg38:Y:16524905-AT-A 9×T**
hg38:Y:10984062-G-T **
hg19:Y:22010227-C-A hg38:Y:19848341-C-A **
hg19:Y:13945398-C-A hg38:Y:11824692-C-A **
hg19:Y:13199252-C-A hg38:Y:11043576-C-A **
hg19:Y:15612215-CAT-C hg38:Y:13500335-CAT-C **
hg38:Y:10927393-A-T **
hg38:Y:10798206-C-T FT431679 **
hg38:Y:10798207-T-A **
hg38:Y:10986481-C-A **
hg38:Y:10839924-T-A **
hg38:Y:10925965-C-A **
hg19:Y:13328512-G-T hg38:Y:11172836-G-T **
hg19:Y:6355680-G-T hg38:Y:6487639-G-T **
hg19:Y:13804116-C-A hg38:Y:11683410-C-A DYZ17 **
hg19:Y:18951872-C-A hg38:Y:16839992-C-A **
hg19:Y:13472225-C-G hg38:Y:11316549-C-G **
hg19:Y:13472233-C-CT hg38:Y:11316557-C-CT **
hg38:Y:10658221-T-C **
hg38:Y:10970719-T-G **
hg19:Y:4078556-G-T hg38:Y:4210515-G-T **
hg38:Y:10689113-C-T FT429127 **
hg38:Y:11028150-C-A **
hg38:Y:11030151-C-T **
hg19:Y:7139410-C-A hg38:Y:7271369-C-A **
hg19:Y:21874839-A-T hg38:Y:19712953-A-T **
hg19:Y:7165449-C-A hg38:Y:7297408-C-A **
hg38:Y:10990140-C-T **
hg38:Y:56841174-C-A **
hg19:Y:7039436-C-A hg38:Y:7171395-C-A **
hg19:Y:7534681-C-A hg38:Y:7666640-C-A **
hg19:Y:16621651-G-T hg38:Y:14509771-G-T **
hg38:Y:10912465-C-T **
hg19:Y:16969412-C-A hg38:Y:14857532-C-A **
hg19:Y:13472219-C-T hg38:Y:11316543-C-T **
hg19:Y:13926835-C-A hg38:Y:11806129-C-A **
hg19:Y:4920093-C-A hg38:Y:5052052-C-A **
hg38:Y:10828870-C-A **
hg38:Y:10689094-A-T **
hg19:Y:21032983-A-G hg38:Y:18871097-A-G Y7519 **
hg19:Y:16848548-C-A hg38:Y:14736668-C-A **
hg19:Y:10057127-C-A hg38:Y:10219518-C-A **
hg19:Y:14559316-C-A hg38:Y:12447517-C-A **
hg38:Y:56848428-G-T **
hg19:Y:8020221-CAAAAAAAAA-C hg38:Y:8152180-CAAAAAAAAA-C 22×A**
hg19:Y:19274821-C-A hg38:Y:17162941-C-A **
hg19:Y:3568484-C-A hg38:Y:3700443-C-A **
hg19:Y:6357785-G-T hg38:Y:6489744-G-T **
hg19:Y:16516449-C-A hg38:Y:14404569-C-A **
hg19:Y:21116796-C-A hg38:Y:18954910-C-A **
hg19:Y:2668281-T-C hg38:Y:2800240-T-C **
hg19:Y:2708149-C-A hg38:Y:2840108-C-A **
hg19:Y:2708674-A-G hg38:Y:2840633-A-G **
hg19:Y:3109598-C-A hg38:Y:3241557-C-A **
hg19:Y:3287111-C-A hg38:Y:3419070-C-A **
hg19:Y:3301906-G-A hg38:Y:3433865-G-A **
hg19:Y:3628631-A-G hg38:Y:3760590-A-G **
hg19:Y:3633090-C-A hg38:Y:3765049-C-A **
hg19:Y:3806660-C-A hg38:Y:3938619-C-A **
hg19:Y:3858917-C-A hg38:Y:3990876-C-A **
hg19:Y:3889549-G-T hg38:Y:4021508-G-T **
hg19:Y:4067893-C-A hg38:Y:4199852-C-A **
hg19:Y:4148675-A-G hg38:Y:4280634-A-G **
hg19:Y:4370629-ACACAGG-A hg38:Y:4502588-ACACAGG-A **
hg19:Y:4402090-A-C hg38:Y:4534049-A-C **
hg19:Y:4426189-T-G hg38:Y:4558148-T-G **
hg19:Y:4604419-A-G hg38:Y:4736378-A-G **
hg19:Y:4756071-C-A hg38:Y:4888030-C-A **
hg19:Y:4805243-C-A hg38:Y:4937202-C-A **
hg19:Y:5674750-T-A hg38:Y:5806709-T-A **
hg19:Y:5873622-G-C hg38:Y:6005581-G-C **
hg19:Y:5873623-G-C hg38:Y:6005582-G-C **
hg19:Y:5873625-T-A hg38:Y:6005584-T-A **
hg19:Y:5873626-T-A hg38:Y:6005585-T-A **
hg19:Y:5937621-G-T hg38:Y:6069580-G-T **
hg19:Y:5990315-G-T hg38:Y:6122274-G-T **
hg19:Y:6150039-AT-A hg38:Y:6281998-AT-A IR3_Dst **
hg19:Y:6179086-T-A hg38:Y:6311045-T-A IR3_Dst **
hg19:Y:6264495-T-C hg38:Y:6396454-T-C IR3_Dst **
hg19:Y:6358042-C-A hg38:Y:6490001-C-A **
hg19:Y:6384408-T-G hg38:Y:6516367-T-G **
hg19:Y:6481708-C-A hg38:Y:6613667-C-A **
hg19:Y:6481803-C-G hg38:Y:6613762-C-G **
hg19:Y:6917388-G-T hg38:Y:7049347-G-T **
hg19:Y:7106406-C-A hg38:Y:7238365-C-A **
hg19:Y:7140454-T-G hg38:Y:7272413-T-G **
hg19:Y:7360082-A-G hg38:Y:7492041-A-G **
hg19:Y:7650504-C-A hg38:Y:7782463-C-A **
hg19:Y:7894578-G-C hg38:Y:8026537-G-C **
hg19:Y:8095244-C-A hg38:Y:8227203-C-A **
hg19:Y:8399145-C-A hg38:Y:8531104-C-A **
hg19:Y:9094446-G-T hg38:Y:9256837-G-T **
hg19:Y:9937056-GA-G hg38:Y:10099447-GA-G **
hg19:Y:9967228-C-A hg38:Y:10129619-C-A **
hg19:Y:10014510-G-T hg38:Y:10176901-G-T **
hg38:Y:10660959-C-A **
hg38:Y:10692948-A-C **
hg38:Y:10779178-T-G **
hg38:Y:10779427-C-A **
hg38:Y:10786441-C-A **
hg38:Y:10787505-G-T **
hg38:Y:10795182-C-T **
hg38:Y:10805795-C-A **
hg38:Y:10825285-C-GTATTA **
hg38:Y:10827976-A-T **
hg38:Y:10828844-A-C **
hg38:Y:10839906-C-T **
hg38:Y:10839909-T-C **
hg38:Y:10839912-C-T FT433577 **
hg38:Y:10847449-T-C **
hg38:Y:10848109-A-T **
hg38:Y:10864952-C-A **
hg38:Y:10880356-C-T **
hg38:Y:10884929-G-A **
hg38:Y:10884943-T-G **
hg38:Y:10894860-C-G **
hg38:Y:10902068-C-A **
hg38:Y:10902694-G-T FT436028 **
hg38:Y:10912471-A-C **
hg38:Y:10912478-G-T **
hg38:Y:10912490-A-G **
hg38:Y:10919155-C-A **
hg38:Y:10929112-C-A **
hg38:Y:10963433-C-A **
hg38:Y:10965202-A-T **
hg38:Y:10970698-A-C **
hg38:Y:10970737-C-G **
hg38:Y:10972398-C-G **
hg38:Y:10973785-T-TG **
hg38:Y:10982689-T-C **
hg38:Y:10991160-C-A **
hg38:Y:11005091-C-A **
hg38:Y:11011551-T-C **
hg19:Y:13254636-C-A hg38:Y:11098960-C-A **
hg19:Y:13306087-G-T hg38:Y:11150411-G-T **
hg19:Y:13306114-G-C hg38:Y:11150438-G-C **
hg19:Y:13307296-G-A hg38:Y:11151620-G-A **
hg19:Y:13319069-A-T hg38:Y:11163393-A-T **
hg19:Y:13443241-C-T hg38:Y:11287565-C-T **
hg19:Y:13528078-C-A hg38:Y:11372402-C-A **
hg19:Y:13537438-C-T hg38:Y:11381762-C-T **
hg19:Y:13559048-C-A hg38:Y:11403372-C-A **
hg19:Y:13605126-T-G hg38:Y:11449450-T-G **
hg38:Y:11646401-T-A DYZ17 **
hg38:Y:11658403-G-T DYZ17 **
hg19:Y:13856351-T-A hg38:Y:11735645-T-A DYZ17 **
hg19:Y:13858575-G-C hg38:Y:11737869-G-C DYZ17 **
hg19:Y:13909853-G-T hg38:Y:11789147-G-T **
hg19:Y:14177911-G-A hg38:Y:12057205-G-A **
hg19:Y:14302124-A-C hg38:Y:12181418-A-C **
hg19:Y:14343978-C-A hg38:Y:12223273-C-A **
hg19:Y:14422254-C-T hg38:Y:12301529-C-T **
hg19:Y:14462438-T-G hg38:Y:12341711-T-G **
hg19:Y:14549133-A-T hg38:Y:12437334-A-T **
hg19:Y:14578466-C-A hg38:Y:12466666-C-A **
hg19:Y:14605181-G-T hg38:Y:12493383-G-T **
hg19:Y:14909456-C-G hg38:Y:12797523-C-G **
hg19:Y:15109645-G-T hg38:Y:12997732-G-T **
hg19:Y:15183659-C-A hg38:Y:13071745-C-A **
hg19:Y:15940066-G-T hg38:Y:13828186-G-T **
hg19:Y:15940092-G-T hg38:Y:13828212-G-T **
hg19:Y:16050540-G-C hg38:Y:13938660-G-C **
hg19:Y:16243141-C-A hg38:Y:14131261-C-A **
hg19:Y:16336786-T-A hg38:Y:14224906-T-A **
hg19:Y:16485878-G-A hg38:Y:14373998-G-A **
hg19:Y:16717349-C-A hg38:Y:14605469-C-A **
hg19:Y:16932064-C-A hg38:Y:14820184-C-A **
hg19:Y:17000351-T-G hg38:Y:14888471-T-G **
hg19:Y:17000383-T-A hg38:Y:14888503-T-A **
hg19:Y:17103984-G-T hg38:Y:14992104-G-T **
hg19:Y:18040413-C-A hg38:Y:15928533-C-A **
hg19:Y:18190387-G-T hg38:Y:16078507-G-T **
hg19:Y:18192000-G-T hg38:Y:16080120-G-T FT396323 **
hg19:Y:18422875-G-A hg38:Y:16310995-G-A P6_Gap **
hg19:Y:18589673-A-AT hg38:Y:16477793-A-AT 8×T**
hg19:Y:18733482-C-A hg38:Y:16621602-C-A **
hg19:Y:18755002-G-C hg38:Y:16643122-G-C **
hg19:Y:18940726-C-A hg38:Y:16828846-C-A **
hg19:Y:19130727-A-T hg38:Y:17018847-A-T **
hg19:Y:19439585-C-A hg38:Y:17327705-C-A **
hg19:Y:19492290-CAAAAAA-C hg38:Y:17380410-CAAAAAA-C 37×A**
hg19:Y:19529340-C-A hg38:Y:17417460-C-A **
hg19:Y:19878802-C-A hg38:Y:17766922-C-A P5_Prx **
hg19:Y:19927000-A-T hg38:Y:17815120-A-T P5_Prx **
hg19:Y:20705084-G-T hg38:Y:18543198-G-T P4_Prx **
hg19:Y:20705094-G-T hg38:Y:18543208-G-T P4_Prx **
hg19:Y:21015105-GGAA-G hg38:Y:18853219-GGAA-G P4_Dst **
hg19:Y:21015110-GA-G hg38:Y:18853224-GA-G P4_Dst **
hg19:Y:21195954-C-A hg38:Y:19034068-C-A **
hg19:Y:21336727-T-A hg38:Y:19174841-T-A **
hg19:Y:21346382-A-C hg38:Y:19184496-A-C **
hg19:Y:21390741-T-G hg38:Y:19228855-T-G **
hg19:Y:21514111-C-A hg38:Y:19352225-C-A **
hg19:Y:21748267-A-C hg38:Y:19586381-A-C **
hg19:Y:21941594-C-A hg38:Y:19779708-C-A **
hg19:Y:21986512-C-A hg38:Y:19824626-C-A FT383994 9×A**
hg19:Y:22075896-G-A hg38:Y:19914010-G-A **
hg19:Y:22090271-C-A hg38:Y:19928385-C-A **
hg19:Y:22122238-C-A hg38:Y:19960352-C-A **
hg19:Y:22263894-G-T hg38:Y:20102008-G-T DYZ19 **
hg19:Y:22290008-T-G hg38:Y:20128122-T-G DYZ19 **
hg19:Y:22322078-G-T hg38:Y:20160192-G-T DYZ19 **
hg19:Y:22510100-A-C hg38:Y:20348214-A-C DYZ19 ****
hg19:Y:22935233-G-T hg38:Y:20773347-G-T **
hg19:Y:23005512-C-A hg38:Y:20843626-C-A **
hg19:Y:23274129-C-A hg38:Y:21112243-C-A **
hg19:Y:23315957-C-T hg38:Y:21154071-C-T **
hg19:Y:23447475-C-G hg38:Y:21285589-C-G **
hg19:Y:24264424-G-T hg38:Y:22118277-G-T P3_b1 **
hg19:Y:24466022-C-A hg38:Y:22319875-C-A **
hg19:Y:27808590-T-G hg38:Y:25662443-T-G P1_Y2 **
hg19:Y:28521214-C-A hg38:Y:26375067-C-A **
hg19:Y:28558239-C-A hg38:Y:26412092-C-A **
hg19:Y:28755732-C-A hg38:Y:26609585-C-A BZ3512 **
hg19:Y:28800881-T-C hg38:Y:26654734-T-C **
hg19:Y:28803663-A-T hg38:Y:26657516-A-T **
hg19:Y:28803709-C-A hg38:Y:26657562-C-A **
hg19:Y:28816049-T-C hg38:Y:26669902-T-C **
hg38:Y:56837286-C-A **
hg38:Y:56879894-T-C **
hg38:Y:56880036-C-G **
hg19:Y:19560137-T-C hg38:Y:17448257-T-C **
hg19:Y:13466524-G-A hg38:Y:11310848-G-A **
hg19:Y:19611206-CTTT-C hg38:Y:17499326-CTTT-C P5_Prx 26×T**
hg19:Y:3445883-T-A hg38:Y:3577842-T-A **
hg19:Y:3632753-T-C hg38:Y:3764712-T-C **
hg19:Y:4586787-A-G hg38:Y:4718746-A-G **
hg19:Y:5561552-T-C hg38:Y:5693511-T-C **
hg19:Y:15936986-C-T hg38:Y:13825106-C-T **
hg19:Y:16145156-CATT-C hg38:Y:14033276-CATT-C P8_Dst **
hg19:Y:17997723-A-G hg38:Y:15885843-A-G P7_Gap **
hg19:Y:19560147-A-C hg38:Y:17448267-A-C **
hg19:Y:19560150-C-G hg38:Y:17448270-C-G **
hg19:Y:24300823-T-TC hg38:Y:22154676-T-TC P3_t1 **
hg19:Y:13447077-C-A hg38:Y:11291401-C-A ***
hg19:Y:58979483-CACTCT-C,CACTCC hg38:Y:56833336-CACTCT-C,CACTCC ***
hg19:Y:18006654-C-CT hg38:Y:15894774-C-CT P7_Gap 12×T***
hg19:Y:13456442-C-A hg38:Y:11300766-C-A ***
hg19:Y:6916924-A-AT hg38:Y:7048883-A-AT 11×T***
hg19:Y:16588668-TA-T hg38:Y:14476788-TA-T A7983 10×A***
hg19:Y:8776539-A-T hg38:Y:8908498-A-T ***
hg19:Y:13472169-C-A hg38:Y:11316493-C-A ***
hg19:Y:13472189-C-T hg38:Y:11316513-C-T ***
hg19:Y:13446598-T-G hg38:Y:11290922-T-G ***
hg19:Y:19389717-TA-T,TAA hg38:Y:17277837-TA-T,TAA 17×A***
hg19:Y:13487744-C-T hg38:Y:11332068-C-T ***
hg19:Y:9702967-GA-G,GAA hg38:Y:9865358-GA-G,GAA IR3_Prx 11×A***
hg38:Y:10955416-C-T ***
hg38:Y:10955418-TTACTG-T ***
hg38:Y:10955442-A-C ***
hg38:Y:10955443-T-A ***
hg19:Y:9843184-C-A hg38:Y:10005575-C-A 15×A***
hg38:Y:11676762-G-T DYZ17 ***
hg38:Y:56833656-CCTATTCCATTCCTCT-C,CCTATTCCATTCCTCG ***
hg38:Y:10980697-A-T ***
hg38:Y:10980664-G-T ***
hg38:Y:56685536-C-G 4×AATGG***
hg19:Y:14342065-T-TA hg38:Y:12221360-T-TA 10×A***
hg38:Y:10796663-A-C ***
hg19:Y:6648649-C-A hg38:Y:6780608-C-A ***
hg38:Y:10772443-T-A,C ***
hg19:Y:19111468-C-A hg38:Y:16999588-C-A ***
hg19:Y:17463321-TTATATA-T hg38:Y:15351441-TTATATA-T 14×TA***
hg19:Y:21382410-C-A hg38:Y:19220524-C-A ***
hg19:Y:14816954-C-A hg38:Y:12705025-C-A ***
hg38:Y:10671021-C-T ***
hg38:Y:10935619-T-A ***
hg19:Y:18857565-C-CT hg38:Y:16745685-C-CT 9×T***
hg19:Y:7470700-CAAAAAA-C hg38:Y:7602659-CAAAAAA-C IR1_L 25×A***
hg38:Y:10839939-T-G ***
hg19:Y:23435181-GTT-G hg38:Y:21273295-GTT-G 20×T***
hg19:Y:21323251-C-A hg38:Y:19161365-C-A ***
hg19:Y:17135937-G-T hg38:Y:15024057-G-T ***
hg19:Y:5220159-CTTT-C hg38:Y:5352118-CTTT-C 21×T***
hg19:Y:13450817-G-A,T hg38:Y:11295141-G-A,T ***
hg38:Y:10794278-C-G,T ***
hg19:Y:4244831-C-A hg38:Y:4376790-C-A ***
hg19:Y:6286901-CA-C,CAA hg38:Y:6418860-CA-C,CAA IR3_Dst 10×A***
hg19:Y:7144080-G-A hg38:Y:7276039-G-A ***
hg19:Y:8374933-C-G hg38:Y:8506892-C-G ***
hg38:Y:10956579-CA-C,CT ***
hg19:Y:13447063-G-T hg38:Y:11291387-G-T ***
hg19:Y:13447078-A-T hg38:Y:11291402-A-T ***
hg19:Y:14036867-C-A hg38:Y:11916161-C-A ***
hg19:Y:14470566-C-A hg38:Y:12349835-C-A ***
hg19:Y:14557767-G-T hg38:Y:12445968-G-T ***
hg19:Y:14808459-C-A hg38:Y:12696530-C-A ***
hg19:Y:15126647-A-G hg38:Y:13014734-A-G ***
hg19:Y:15177245-TA-T hg38:Y:13065331-TA-T 9×A***
hg19:Y:21386294-G-T hg38:Y:19224408-G-T ***
hg19:Y:26440511-C-T hg38:Y:24294364-C-T P1_Y1 ***
hg38:Y:56826065-G-C ***
hg38:Y:56829828-T-A ***
hg19:Y:24387908-C-A hg38:Y:22241761-C-A ***
hg19:Y:21134999-T-A hg38:Y:18973113-T-A ***
hg19:Y:18255888-TAAAA-T,TAAA hg38:Y:16144008-TAAAA-T,TAAA 22×A***
hg19:Y:17130400-CTT-C,CT hg38:Y:15018520-CTT-C,CT 21×T***
hg19:Y:3463008-CT-C hg38:Y:3594967-CT-C ***
hg19:Y:3692017-T-C hg38:Y:3823976-T-C ***
hg19:Y:18058005-G-A hg38:Y:15946125-G-A ***
hg19:Y:18395599-C-CAA hg38:Y:16283719-C-CAA P6_Gap 15×A***
hg19:Y:19138332-CCTCT-C hg38:Y:17026452-CCTCT-C 9×CT***
hg19:Y:21473682-G-A hg38:Y:19311796-G-A ***
hg19:Y:22271793-A-G hg38:Y:20109907-A-G DYZ19 ***
hg19:Y:22857448-A-G hg38:Y:20695562-A-G ***
hg38:Y:56862049-C-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 740966941060377027287612147
Kit: 7409661482388992815378263348
Used in age calculations1482388992815378263348
Counts of SNPs46
Variant counts last updated 2026-02-20 03:04:22.


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