Zeiss
BigY2: B8234MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 B8234 |
---|---|---|---|---|---|---|---|---|
13687616-G-A | 11531940-G-A | A* | ||||||
13687861-G-A | 11532185-G-A | A* | ||||||
19911227-C-A | 17799347-C-A | P5_Prx | A* | |||||
20039843-G-A | 17927963-G-A | P5_Prx | A* | |||||
22276702-T-G | 20114816-T-G | DYZ19 | A* | |||||
26129170-T-G | 23983023-T-G | P1_Y1 | A* | |||||
26159571-A-G | 24013424-A-G | P1_Y1 | A* | |||||
28818605-G-C | 26672458-G-C | A* | ||||||
8879870-C-T | 9011829-C-T | BY76578 | Y | + | ||||
5212299-C-T | 5344258-C-T | BY58581 | + | |||||
5675262-C-T | 5807221-C-T | BY58791 | + | |||||
7190353-G-A | 7322312-G-A | Y83550 | Y | Y | + | |||
7334529-A-G | 7466488-A-G | BY64632 | Y | Y | + | |||
7864050-G-A | 7996009-G-A | BY68299 | Y | Y | + | |||
8216898-C-A | 8348857-C-A | BY70836 | Y | Y | + | |||
8281565-G-T | 8413524-G-T | BY71378 | Y | Y | + | |||
8461352-G-A | 8593311-G-A | BY72989 | Y | Y | + | |||
8798225-T-C | 8930184-T-C | BY75977 | Y | Y | + | |||
9009562-A-C | 9171953-A-C | BY77294 | Y | + | ||||
13853268-A-G | 11732562-A-G | BY91492 | + | |||||
14337712-G-T | 12217007-G-T | FT179951 | Y | Y | + | |||
14898688-A-G | 12786755-A-G | BY98348 | Y | Y | + | |||
15704862-G-C | 13592982-G-C | BY103416 | Y | Y | + | |||
16333815-C-T | 14221935-C-T | BY107007 | Y | Y | + | |||
16365712-A-T | 14253832-A-T | BY107257 | Y | Y | + | |||
16811926-G-T | 14700046-G-T | BY110343 | Y | Y | + | |||
16870180-C-G | 14758300-C-G | BY110736 | Y | Y | + | |||
16970763-C-T | 14858883-C-T | BY111518 | Y | Y | + | |||
17387956-C-G | 15276076-C-G | BY114347 | Y | Y | + | |||
17750268-G-T | 15638388-G-T | BY117122 | Y | Y | + | |||
18074612-C-A | 15962732-C-A | BY119721 | Y | Y | + | |||
18145246-G-A | 16033366-G-A | BY120387 | Y | Y | + | |||
20064766-T-C | 17952886-T-C | BY212088 | P5_Gap | + | ||||
21530996-G-A | 19369110-G-A | BY133628 | Y | Y | + | |||
21641069-T-C | 19479183-T-C | BY134381 | Y | Y | + | |||
21917705-A-G | 19755819-A-G | BY136441 | Y | Y | + | |||
22298217-C-A | 20136331-C-A | BY184387 | DYZ19 | + | ||||
22445719-A-C | 20283833-A-C | BY185970 | DYZ19 | + | ||||
22445722-C-T | 20283836-C-T | FT457064 | DYZ19 | + | ||||
23052718-G-A | 20890832-G-A | Y58644 | Y | 8×A | + | |||
23566183-A-T | 21404297-A-T | BY146336 | Y | Y | + | |||
28789245-T-C | 26643098-T-C | BY151341 | + | |||||
25804899-T-C | 23658752-T-C | P1_b3 | ** | |||||
5784590-GAAA-G | 5916549-GAAA-G | 13×A | ** | |||||
17265604-T-G | 15153724-T-G | ** | ||||||
21830190-T-A | 19668304-T-A | 12×A | ** | |||||
9221714-T-C | 9384105-T-C | ** | ||||||
15186425-G-A | 13074511-G-A | ** | ||||||
23512432-A-T | 21350546-A-T | ** | ||||||
23512435-A-C | 21350549-A-C | ** | ||||||
10842664-G-A | ** | |||||||
16177219-C-A | 14065339-C-A | ** | ||||||
15115634-C-A | 13003721-C-A | ** | ||||||
4213056-C-A | 4345015-C-A | ** | ||||||
7208189-C-A | 7340148-C-A | ** | ||||||
21456052-C-A | 19294166-C-A | ** | ||||||
10659938-C-A | ** | |||||||
24875370-C-A | 22729223-C-A | g1 | ** | |||||
23807455-C-A | 21645569-C-A | ** | ||||||
7028739-C-A | 7160698-C-A | ** | ||||||
18274948-GTATA-G | 16163068-GTATA-G | P6_Prx | 8×TA | ** | ||||
4908685-C-A | 5040644-C-A | ** | ||||||
28633643-C-A | 26487496-C-A | ** | ||||||
18184802-G-T | 16072922-G-T | ** | ||||||
19866987-A-G | 17755107-A-G | P5_Prx | ** | |||||
6096861-C-A | 6228820-C-A | ** | ||||||
21189662-C-T | 19027776-C-T | ** | ||||||
21163133-CA-C | 19001247-CA-C | ** | ||||||
14343924-C-A | 12223219-C-A | ** | ||||||
4473028-C-A | 4604987-C-A | ** | ||||||
18847692-C-A | 16735812-C-A | ** | ||||||
10678501-G-T | ** | |||||||
10842620-T-G | ** | |||||||
10842621-A-G | ** | |||||||
10842622-C-T | ** | |||||||
10842629-CCGTTT-C | ** | |||||||
14366766-C-A | 12246061-C-A | ** | ||||||
23981880-C-A | 21835733-C-A | ** | ||||||
14204886-C-A | 12084180-C-A | ** | ||||||
14553236-C-A | 12441437-C-A | ** | ||||||
10667679-G-T | ** | |||||||
13902195-C-A | 11781489-C-A | ** | ||||||
4124041-C-A | 4256000-C-A | ** | ||||||
14789428-C-A | 12677499-C-A | ** | ||||||
5816968-C-A | 5948927-C-A | ** | ||||||
21072294-T-C | 18910408-T-C | ** | ||||||
16515862-C-A | 14403982-C-A | ** | ||||||
14844391-C-A | 12732457-C-A | ** | ||||||
11663860-C-A | FT450814 | ** | ||||||
7664672-C-A | 7796631-C-A | ** | ||||||
6648675-C-A | 6780634-C-A | ** | ||||||
28697981-C-A | 26551834-C-A | ** | ||||||
21700354-G-C | 19538468-G-C | ** | ||||||
56830254-A-T | ** | |||||||
7182147-C-A | 7314106-C-A | ** | ||||||
19206725-T-G | 17094845-T-G | ** | ||||||
9431488-G-A | 9593879-G-A | ** | ||||||
21077001-GA-G | 18915115-GA-G | 8×A | ** | |||||
13858995-C-A | 11738289-C-A | ** | ||||||
13895796-C-A | 11775090-C-A | ** | ||||||
7142241-C-A | 7274200-C-A | ** | ||||||
13200460-C-A | 11044784-C-A | ** | ||||||
10032344-GTT-G | 10194735-GTT-G | 12×T | ** | |||||
24432792-C-T | 22286645-C-T | ** | ||||||
4521442-C-A | 4653401-C-A | ** | ||||||
8720244-C-A | 8852203-C-A | ** | ||||||
18931868-C-A | 16819988-C-A | ** | ||||||
10777417-C-A | ** | |||||||
10750313-C-A | ** | |||||||
19609580-G-T | 17497700-G-T | P5_Prx | ** | |||||
16271831-A-C | 14159951-A-C | ** | ||||||
10676931-C-A | ** | |||||||
23440444-C-A | 21278558-C-A | ** | ||||||
14021381-C-A | 11900675-C-A | ** | ||||||
23252697-G-T | 21090811-G-T | ** | ||||||
16522355-C-A | 14410475-C-A | ** | ||||||
10037931-C-A | 10200322-C-A | ** | ||||||
5689959-C-A | 5821918-C-A | ** | ||||||
14805984-C-A | 12694055-C-A | ** | ||||||
19899623-AGGAAG-A | 17787743-AGGAAG-A | P5_Prx | ** | |||||
17187534-C-A | 15075654-C-A | ** | ||||||
8379486-AC-A | 8511445-AC-A | ** | ||||||
23311333-C-A | 21149447-C-A | ** | ||||||
3882382-G-T | 4014341-G-T | ** | ||||||
10758095-C-A | ** | |||||||
17317356-C-A | 15205476-C-A | ** | ||||||
23460453-C-A | 21298567-C-A | FT71278 | ** | |||||
10984849-G-A | FT200132 | ** | ||||||
13846887-C-A | 11726181-C-A | ** | ||||||
10861197-G-A | FT434434 | ** | ||||||
10979549-A-G | ** | |||||||
8824248-T-C | 8956207-T-C | ** | ||||||
8824254-C-T | 8956213-C-T | ** | ||||||
2708571-A-G | 2840530-A-G | ** | ||||||
2774968-T-A | 2906927-T-A | ** | ||||||
2856522-T-C | 2988481-T-C | ** | ||||||
2979755-G-T | 3111714-G-T | ** | ||||||
2980326-C-A | 3112285-C-A | ** | ||||||
2999659-C-A | 3131618-C-A | ** | ||||||
3006591-C-A | 3138550-C-A | ** | ||||||
3013865-C-A | 3145824-C-A | ** | ||||||
3014751-C-A | 3146710-C-A | ** | ||||||
3063364-G-T | 3195323-G-T | ** | ||||||
3079517-C-G | 3211476-C-G | ** | ||||||
3100560-C-A | 3232519-C-A | ** | ||||||
3103457-C-A | 3235416-C-A | ** | ||||||
3138989-T-C | 3270948-T-C | ** | ||||||
3151768-G-A | 3283727-G-A | ** | ||||||
3151839-C-G | 3283798-C-G | ** | ||||||
3153878-A-G | 3285837-A-G | ** | ||||||
3164629-T-A | 3296588-T-A | ** | ||||||
3249420-A-G | 3381379-A-G | ** | ||||||
3250735-G-A | 3382694-G-A | ** | ||||||
3251991-T-C | 3383950-T-C | ** | ||||||
3273079-G-T | 3405038-G-T | ** | ||||||
3301393-C-A | 3433352-C-A | ** | ||||||
3304576-A-G | 3436535-A-G | ** | ||||||
3343214-A-G | 3475173-A-G | ** | ||||||
3347017-A-G | 3478976-A-G | ** | ||||||
3396379-G-T | 3528338-G-T | ** | ||||||
3443594-G-T | 3575553-G-T | ** | ||||||
3461193-CT-C | 3593152-CT-C | ** | ||||||
3497775-A-G | 3629734-A-G | ** | ||||||
3524252-T-G | 3656211-T-G | ** | ||||||
3554521-A-G | 3686480-A-G | ** | ||||||
3585131-A-C | 3717090-A-C | ** | ||||||
3635166-C-A | 3767125-C-A | ** | ||||||
3798314-G-T | 3930273-G-T | ** | ||||||
3839268-C-A | 3971227-C-A | ** | ||||||
3846792-C-A | 3978751-C-A | ** | ||||||
3877660-C-A | 4009619-C-A | ** | ||||||
3877697-G-T | 4009656-G-T | ** | ||||||
3882191-A-G | 4014150-A-G | ** | ||||||
3883537-G-T | 4015496-G-T | ** | ||||||
3914428-G-T | 4046387-G-T | ** | ||||||
3950491-G-T | 4082450-G-T | ** | ||||||
3953396-A-G | 4085355-A-G | ** | ||||||
3998364-C-A | 4130323-C-A | ** | ||||||
4035368-G-T | 4167327-G-T | ** | ||||||
4074720-T-C | 4206679-T-C | ** | ||||||
4080987-T-A | 4212946-T-A | ** | ||||||
4094144-C-A | 4226103-C-A | ** | ||||||
4104551-G-C | 4236510-G-C | ** | ||||||
4156421-G-T | 4288380-G-T | ** | ||||||
4169521-C-T | 4301480-C-T | ** | ||||||
4195607-T-C | 4327566-T-C | ** | ||||||
4272644-C-A | 4404603-C-A | ** | ||||||
4355997-T-A | 4487956-T-A | ** | ||||||
4388646-A-T | 4520605-A-T | ** | ||||||
4404579-C-A | 4536538-C-A | ** | ||||||
4418019-A-G | 4549978-A-G | ** | ||||||
4480215-A-G | 4612174-A-G | ** | ||||||
4487816-GAAA-G | 4619775-GAAA-G | 19×A | ** | |||||
4490988-G-T | 4622947-G-T | ** | ||||||
4513640-G-C | 4645599-G-C | ** | ||||||
4529764-G-T | 4661723-G-T | ** | ||||||
4632483-C-A | 4764442-C-A | ** | ||||||
4755347-C-A | 4887306-C-A | ** | ||||||
4823944-G-T | 4955903-G-T | ** | ||||||
4936543-T-G | 5068502-T-G | ** | ||||||
4968953-A-C | 5100912-A-C | ** | ||||||
4968969-T-C | 5100928-T-C | ** | ||||||
4968978-T-C | 5100937-T-C | ** | ||||||
4968991-T-C | 5100950-T-C | ** | ||||||
4969010-G-C | 5100969-G-C | ** | ||||||
4979159-T-G | 5111118-T-G | ** | ||||||
4979271-AG-A | 5111230-AG-A | ** | ||||||
4979369-C-A | 5111328-C-A | ** | ||||||
5052127-C-A | 5184086-C-A | ** | ||||||
5151885-C-A | 5283844-C-A | ** | ||||||
5207162-T-C | 5339121-T-C | ** | ||||||
5207235-T-C | 5339194-T-C | ** | ||||||
5211947-A-G | 5343906-A-G | ** | ||||||
5214582-G-C | 5346541-G-C | ** | ||||||
5235400-C-A | 5367359-C-A | ** | ||||||
5236679-C-A | 5368638-C-A | ** | ||||||
5312159-G-T | 5444118-G-T | ** | ||||||
5331545-A-C | 5463504-A-C | ** | ||||||
5343710-C-A | 5475669-C-A | ** | ||||||
5393390-GGAA-G | 5525349-GGAA-G | ** | ||||||
5393401-G-A | 5525360-G-A | ** | ||||||
5399566-G-T | 5531525-G-T | ** | ||||||
5409952-A-G | 5541911-A-G | ** | ||||||
5417936-T-C | 5549895-T-C | ** | ||||||
5447087-AT-A | 5579046-AT-A | ** | ||||||
5461559-C-T | 5593518-C-T | ** | ||||||
5462944-C-T | 5594903-C-T | ** | ||||||
5531816-AT-A | 5663775-AT-A | 8×T | ** | |||||
5555233-G-T | 5687192-G-T | ** | ||||||
5587435-G-T | 5719394-G-T | ** | ||||||
5647841-G-T | 5779800-G-T | ** | ||||||
5658758-G-T | 5790717-G-T | ** | ||||||
5669991-C-A | 5801950-C-A | ** | ||||||
5674770-C-A | 5806729-C-A | ** | ||||||
5689937-AG-A | 5821896-AG-A | ** | ||||||
5741566-G-T | 5873525-G-T | ** | ||||||
5746169-C-A | 5878128-C-A | ** | ||||||
5756426-C-A | 5888385-C-A | ** | ||||||
5758096-C-T | 5890055-C-T | ** | ||||||
5823342-G-T | 5955301-G-T | ** | ||||||
5878936-G-T | 6010895-G-T | ** | ||||||
5885529-C-T | 6017488-C-T | ** | ||||||
5933865-C-A | 6065824-C-A | ** | ||||||
5937103-C-A | 6069062-C-A | ** | ||||||
5966161-A-G | 6098120-A-G | ** | ||||||
5966229-G-T | 6098188-G-T | ** | ||||||
5995285-C-A | 6127244-C-A | ** | ||||||
5997697-C-A | 6129656-C-A | ** | ||||||
6017252-C-A | 6149211-C-A | ** | ||||||
6028266-T-G | 6160225-T-G | ** | ||||||
6041094-T-C | 6173053-T-C | ** | ||||||
6047681-C-A | 6179640-C-A | ** | ||||||
6073930-G-T | 6205889-G-T | ** | ||||||
6089829-A-T | 6221788-A-T | ** | ||||||
6229711-C-A | 6361670-C-A | IR3_Dst | ** | |||||
6267206-C-A | 6399165-C-A | IR3_Dst | ** | |||||
6368087-C-A | 6500046-C-A | ** | ||||||
6442401-G-T | 6574360-G-T | ** | ||||||
6474444-G-T | 6606403-G-T | ** | ||||||
6474645-CCAG-C | 6606604-CCAG-C | ** | ||||||
6485458-C-A | 6617417-C-A | ** | ||||||
6488880-C-A | 6620839-C-A | ** | ||||||
6580517-C-A | 6712476-C-A | ** | ||||||
6593303-C-T | 6725262-C-T | ** | ||||||
6621533-C-T | 6753492-C-T | ** | ||||||
6654788-C-G | 6786747-C-G | ** | ||||||
6772908-C-A | 6904867-C-A | ** | ||||||
6772919-C-A | 6904878-C-A | ** | ||||||
6791141-G-T | 6923100-G-T | ** | ||||||
6832911-C-T | 6964870-C-T | ** | ||||||
6874534-A-G | 7006493-A-G | ** | ||||||
6954854-C-T | 7086813-C-T | ** | ||||||
7029728-G-A | 7161687-G-A | ** | ||||||
7040489-G-T | 7172448-G-T | ** | ||||||
7042790-C-A | 7174749-C-A | ** | ||||||
7043507-A-G | 7175466-A-G | ** | ||||||
7061231-C-G | 7193190-C-G | ** | ||||||
7081337-C-T | 7213296-C-T | ** | ||||||
7166472-A-G | 7298431-A-G | ** | ||||||
7214231-C-A | 7346190-C-A | FT209080 | ** | |||||
7243185-T-C | 7375144-T-C | FTA27391 | ** | |||||
7254061-T-C | 7386020-T-C | ** | ||||||
7306754-C-A | 7438713-C-A | ** | ||||||
7338650-T-C | 7470609-T-C | ** | ||||||
7362380-T-TA | 7494339-T-TA | ** | ||||||
7363356-A-C | 7495315-A-C | ** | ||||||
7664353-G-T | 7796312-G-T | ** | ||||||
7708979-C-A | 7840938-C-A | ** | ||||||
7717856-TG-T | 7849815-TG-T | ** | ||||||
7753824-C-T | 7885783-C-T | ** | ||||||
7774972-C-A | 7906931-C-A | ** | ||||||
7829651-C-A | 7961610-C-A | ** | ||||||
7990529-C-G | 8122488-C-G | ** | ||||||
8051947-A-G | 8183906-A-G | ** | ||||||
8051961-A-G | 8183920-A-G | ** | ||||||
8052000-G-A | 8183959-G-A | ** | ||||||
8094378-C-T | 8226337-C-T | ** | ||||||
8138117-C-A | 8270076-C-A | ** | ||||||
8344544-A-T | 8476503-A-T | ** | ||||||
8660971-C-A | 8792930-C-A | ** | ||||||
8671483-T-C | 8803442-T-C | FT57611 | ** | |||||
8692235-C-A | 8824194-C-A | ** | ||||||
8816283-G-A | 8948242-G-A | ** | ||||||
8824596-C-G | 8956555-C-G | ** | ||||||
8849958-C-A | 8981917-C-A | ** | ||||||
9110206-G-T | ** | |||||||
9377539-C-A | 9539930-C-A | ** | ||||||
9429480-TAAAAAAA-T | 9591871-TAAAAAAA-T | 18×A | ** | |||||
9888681-G-A | 10051072-G-A | ** | ||||||
9909696-G-C | 10072087-G-C | ** | ||||||
9937128-A-G | 10099519-A-G | ** | ||||||
10039971-G-T | 10202362-G-T | ** | ||||||
10051459-G-A | 10213850-G-A | ** | ||||||
10645923-C-A | ** | |||||||
10659993-C-A | ** | |||||||
10659994-C-A | ** | |||||||
10663031-A-ATTCCG | ** | |||||||
10678979-C-A | ** | |||||||
10684958-A-G | ** | |||||||
10685031-T-G | ** | |||||||
10692235-G-T | ** | |||||||
10774097-T-A | ** | |||||||
10798758-A-G | ** | |||||||
10821754-C-A | ** | |||||||
10842645-CA-C | ** | |||||||
10842662-T-C | ** | |||||||
10842671-A-T | ** | |||||||
10842687-A-T | ** | |||||||
10851455-C-A | ** | |||||||
10860051-C-A | ** | |||||||
10861195-T-C | ** | |||||||
10861200-C-T | ** | |||||||
10882899-C-A | ** | |||||||
10889780-C-CGTACA | ** | |||||||
10893257-C-A | ** | |||||||
10925683-C-A | ** | |||||||
10926336-C-A | ** | |||||||
10928857-T-A | ** | |||||||
10935858-A-C | ** | |||||||
10944404-C-A | ** | |||||||
10991142-C-A | ** | |||||||
11000978-C-T | ** | |||||||
11013394-C-A | ** | |||||||
11021396-C-A | ** | |||||||
11023321-A-G | ** | |||||||
11031283-C-A | ** | |||||||
11037779-A-G | ** | |||||||
13193970-C-A | 11038294-C-A | ** | ||||||
13197901-G-A | 11042225-G-A | ** | ||||||
13236191-A-G | 11080515-A-G | ** | ||||||
13290316-T-C | 11134640-T-C | ** | ||||||
13295046-T-A | 11139370-T-A | ** | ||||||
13317151-G-T | 11161475-G-T | ** | ||||||
13331449-A-G | 11175773-A-G | ** | ||||||
13331454-A-T | 11175778-A-T | ** | ||||||
13421638-C-A | 11265962-C-A | ** | ||||||
13500423-C-A | 11344747-C-A | ** | ||||||
13514376-A-G | 11358700-A-G | ** | ||||||
13524077-A-G | 11368401-A-G | ** | ||||||
13578685-C-A | 11423009-C-A | ** | ||||||
13586091-C-A | 11430415-C-A | ** | ||||||
11658328-G-C | ** | |||||||
11664296-G-T | ** | |||||||
13858245-G-A | 11737539-G-A | ** | ||||||
13900407-G-T | 11779701-G-T | ** | ||||||
13904907-G-T | 11784201-G-T | ** | ||||||
13928339-G-A | 11807633-G-A | FT104859 | ** | |||||
13935936-C-A | 11815230-C-A | ** | ||||||
13939675-A-G | 11818969-A-G | ** | ||||||
13954252-G-T | 11833546-G-T | ** | ||||||
13960635-G-T | 11839929-G-T | ** | ||||||
14000515-T-G | 11879809-T-G | ** | ||||||
14033959-C-A | 11913253-C-A | ** | ||||||
14073882-C-A | 11953176-C-A | ** | ||||||
14120111-G-T | 11999405-G-T | ** | ||||||
14175578-C-A | 12054872-C-A | ** | ||||||
14326596-G-A | 12205890-G-A | ** | ||||||
14361787-C-A | 12241082-C-A | ** | ||||||
14397618-A-T | 12276914-A-T | ** | ||||||
14457581-A-T | 12336854-A-T | ** | ||||||
14509972-C-A | 12398177-C-A | ** | ||||||
14557261-A-T | 12445462-A-T | ** | ||||||
14698334-C-T | 12586400-C-T | ** | ||||||
14792984-C-T | 12681055-C-T | ** | ||||||
14815448-T-G | 12703519-T-G | ** | ||||||
14908343-A-C | 12796410-A-C | ** | ||||||
14963916-T-A | 12851991-T-A | ** | ||||||
14988832-G-T | 12876898-G-T | ** | ||||||
14988893-T-A | 12876959-T-A | ** | ||||||
15073127-C-A | 12961217-C-A | ** | ||||||
15082206-G-T | 12970296-G-T | ** | ||||||
15084180-T-C | 12972270-T-C | ** | ||||||
15283935-G-T | 13172034-G-T | ** | ||||||
15297049-C-A | 13185148-C-A | ** | ||||||
15536246-A-T | 13424366-A-T | ** | ||||||
15536252-C-T | 13424372-C-T | ** | ||||||
15558111-T-G | 13446231-T-G | ** | ||||||
15599877-G-T | 13487997-G-T | ** | ||||||
15647777-C-A | 13535897-C-A | ** | ||||||
15655108-G-T | 13543228-G-T | ** | ||||||
15684363-A-T | 13572483-A-T | ** | ||||||
15684390-A-C | 13572510-A-C | ** | ||||||
15698800-A-T | 13586920-A-T | ** | ||||||
15776006-G-T | 13664126-G-T | ** | ||||||
15788071-CA-C | 13676191-CA-C | ** | ||||||
15788208-C-A | 13676328-C-A | ** | ||||||
15794461-G-A | 13682581-G-A | ** | ||||||
15922701-G-T | 13810821-G-T | ** | ||||||
15936767-G-A | 13824887-G-A | ** | ||||||
15971526-C-A | 13859646-C-A | ** | ||||||
15999893-G-T | 13888013-G-T | ** | ||||||
16055243-C-A | 13943363-C-A | ** | ||||||
16060645-C-A | 13948765-C-A | ** | ||||||
16093125-C-A | 13981245-C-A | ** | ||||||
16176998-C-G | 14065118-C-G | 9×A | ** | |||||
16227987-G-A | 14116107-G-A | ** | ||||||
16246211-A-G | 14134331-A-G | ** | ||||||
16320484-G-T | 14208604-G-T | ** | ||||||
16429645-C-T | 14317765-C-T | ** | ||||||
16437489-G-T | 14325609-G-T | ** | ||||||
16526712-G-A | 14414832-G-A | ** | ||||||
16572850-A-C | 14460970-A-C | ** | ||||||
16612429-G-C | 14500549-G-C | ** | ||||||
16932987-A-G | 14821107-A-G | ** | ||||||
17065745-G-T | 14953865-G-T | ** | ||||||
17089086-C-A | 14977206-C-A | ** | ||||||
17200070-G-A | 15088190-G-A | ** | ||||||
17200106-A-G | 15088226-A-G | ** | ||||||
17255063-A-G | 15143183-A-G | ** | ||||||
17313362-T-A | 15201482-T-A | ** | ||||||
17324120-A-G | 15212240-A-G | ** | ||||||
17377510-T-G | 15265630-T-G | ** | ||||||
17377866-G-T | 15265986-G-T | ** | ||||||
17429583-C-A | 15317703-C-A | ** | ||||||
17430459-G-T | 15318579-G-T | ** | ||||||
17503968-CCT-C | 15392088-CCT-C | ** | ||||||
17536658-C-A | 15424778-C-A | ** | ||||||
17542644-A-T | 15430764-A-T | ** | ||||||
17542667-G-T | 15430787-G-T | ** | ||||||
17542682-T-A | 15430802-T-A | ** | ||||||
17544875-C-A | 15432995-C-A | ** | ||||||
17732149-T-A | 15620269-T-A | ** | ||||||
17732157-C-G | 15620277-C-G | ** | ||||||
17732213-A-T | 15620333-A-T | ** | ||||||
17855931-G-T | 15744051-G-T | ** | ||||||
18186357-C-A | 16074477-C-A | ** | ||||||
18188094-C-A | 16076214-C-A | ** | ||||||
18285973-C-A | 16174093-C-A | P6_Prx | ** | |||||
18402755-G-T | 16290875-G-T | P6_Gap | ** | |||||
18524308-G-T | 16412428-G-T | P6_Dst | ** | |||||
18539654-G-T | 16427774-G-T | ** | ||||||
18565862-C-A | 16453982-C-A | ** | ||||||
18611697-C-A | 16499817-C-A | ** | ||||||
18611703-G-A | 16499823-G-A | ** | ||||||
18652870-A-G | 16540990-A-G | ** | ||||||
18845233-A-C | 16733353-A-C | ** | ||||||
18845253-T-C | 16733373-T-C | ** | ||||||
18874862-G-T | 16762982-G-T | ** | ||||||
18930463-C-A | 16818583-C-A | ** | ||||||
19043083-C-A | 16931203-C-A | ** | ||||||
19235458-G-T | 17123578-G-T | ** | ||||||
19258901-C-A | 17147021-C-A | ** | ||||||
19286410-A-G | 17174530-A-G | ** | ||||||
19301464-G-A | 17189584-G-A | ** | ||||||
19303933-G-C | 17192053-G-C | ** | ||||||
19377110-G-A | 17265230-G-A | ** | ||||||
19427215-T-C | 17315335-T-C | ** | ||||||
19427290-CA-C | 17315410-CA-C | ** | ||||||
19856205-C-A | 17744325-C-A | P5_Prx | ** | |||||
20025732-A-T | 17913852-A-T | P5_Prx | ** | |||||
20693252-T-A | 18531366-T-A | P4_Prx | ** | |||||
20809437-G-C | 18647551-G-C | P4_Gap | ** | |||||
20936388-G-A | 18774502-G-A | P4_Dst | ** | |||||
21087190-T-A | 18925304-T-A | ** | ||||||
21280626-T-C | 19118740-T-C | ** | ||||||
21320667-C-T | 19158781-C-T | ** | ||||||
21323067-C-A | 19161181-C-A | ** | ||||||
21580869-G-T | 19418983-G-T | ** | ||||||
21597093-C-A | 19435207-C-A | ** | ||||||
21742597-G-T | 19580711-G-T | ** | ||||||
21746943-G-A | 19585057-G-A | ** | ||||||
21747810-G-T | 19585924-G-T | ** | ||||||
21830178-G-A | 19668292-G-A | 8×A | ** | |||||
21853634-G-A | 19691748-G-A | FGC14553 | ** | |||||
22001851-A-T | 19839965-A-T | ** | ||||||
22040781-G-A | 19878895-G-A | ** | ||||||
22048569-C-A | 19886683-C-A | ** | ||||||
22132712-C-CA | 19970826-C-CA | ** | ||||||
22135582-C-A | 19973696-C-A | ** | ||||||
22155610-A-G | 19993724-A-G | ** | ||||||
22170316-C-A | 20008430-C-A | ** | ||||||
22172038-G-T | 20010152-G-T | ** | ||||||
22276952-T-C | 20115066-T-C | DYZ19 | ** | |||||
22459883-T-C | 20297997-T-C | DYZ19 | ** | |||||
22544705-A-C | 20382819-A-C | ** | ||||||
22592932-A-C | 20431046-A-C | ** | ||||||
22624415-C-A | 20462529-C-A | ** | ||||||
22780809-T-C | 20618923-T-C | ** | ||||||
22811881-T-A | 20649995-T-A | ** | ||||||
22811890-A-G | 20650004-A-G | ** | ||||||
22880706-A-G | 20718820-A-G | ** | ||||||
23200167-C-T | 21038281-C-T | ** | ||||||
23277197-C-A | 21115311-C-A | ** | ||||||
23372993-A-G | 21211107-A-G | ** | ||||||
23442636-C-A | 21280750-C-A | ** | ||||||
23786386-C-A | 21624500-C-A | ** | ||||||
23802315-G-T | 21640429-G-T | ** | ||||||
21755464-C-T | ** | |||||||
23961224-C-A | 21815077-C-A | ** | ||||||
24387882-CTA-C | 22241735-CTA-C | ** | ||||||
24403773-T-A | 22257626-T-A | ** | ||||||
24408261-C-A | 22262114-C-A | ** | ||||||
24432814-GC-G | 22286667-GC-G | ** | ||||||
24877609-G-T | 22731462-G-T | g1 | ** | |||||
25984863-C-A | 23838716-C-A | P1_Y1 | ** | |||||
26146836-C-A | 24000689-C-A | P1_Y1 | ** | |||||
26436989-T-C | 24290842-T-C | P1_Y1 | ** | |||||
26538802-A-T | 24392655-A-T | P1_g2 | ** | |||||
27515950-G-T | 25369803-G-T | P1_Y2 | ** | |||||
27616451-G-T | 25470304-G-T | P1_Y2 | ** | |||||
28483475-G-T | 26337328-G-T | ** | ||||||
28534558-T-A | 26388411-T-A | ** | ||||||
28561811-AT-A | 26415664-AT-A | ** | ||||||
28570614-A-G | 26424467-A-G | ** | ||||||
28596780-C-A | 26450633-C-A | ** | ||||||
28598122-G-A | 26451975-G-A | ** | ||||||
28605361-A-C | 26459214-A-C | ** | ||||||
28608406-A-C | 26462259-A-C | ** | ||||||
28610227-T-C | 26464080-T-C | ** | ||||||
28611730-C-A | 26465583-C-A | ** | ||||||
28722634-G-C | 26576487-G-C | ** | ||||||
28722646-G-A | 26576499-G-A | ** | ||||||
28777822-C-A | 26631675-C-A | ** | ||||||
28792464-A-T | 26646317-A-T | ** | ||||||
56830398-C-CATTCA | ** | |||||||
56830405-C-G | ** | |||||||
56830407-T-A | ** | |||||||
56845641-A-C | ** | |||||||
56845643-C-A | ** | |||||||
56870843-G-A | ** | |||||||
56879389-T-A | ** | |||||||
56879395-C-G | ** | |||||||
15099-CTT-C | ** | |||||||
30803-A-G | ** | |||||||
13717275-AGAATGGAATG-A | 11561599-AGAATGGAATG-A | 8×GAATG | *** | |||||
10842025-G-T | *** | |||||||
10654049-C-A | *** | |||||||
9094630-C-A | 9257021-C-A | *** | ||||||
24890224-ATT-A | 22744077-ATT-A | g1 | 13×T | *** | ||||
13454517-C-A | 11298841-C-A | *** | ||||||
10861273-G-T | *** | |||||||
19253110-G-T | 17141230-G-T | *** | ||||||
10824106-C-A | *** | |||||||
5858525-C-A | 5990484-C-A | *** | ||||||
6971886-CAAA-C | 7103845-CAAA-C | 14×A | *** | |||||
4841712-G-T | 4973671-G-T | *** | ||||||
10880778-C-A | *** | |||||||
4223228-C-A | 4355187-C-A | *** | ||||||
5202001-T-C | 5333960-T-C | *** | ||||||
5957196-A-G | 6089155-A-G | *** | ||||||
7717749-T-A | 7849708-T-A | *** | ||||||
8333572-TCTCCTCCTC-T,TCTTCTCCTCCTC | 8465531-TCTCCTCCTC-T,TCTTCTCCTCCTC | *** | ||||||
9173191-A-T | 9335582-A-T | *** | ||||||
9398041-GAAAAA-G | 9560432-GAAAAA-G | 15×A | *** | |||||
10668403-C-A | *** | |||||||
10670895-C-A | *** | |||||||
10744572-T-A | *** | |||||||
10799628-T-A | *** | |||||||
10814531-T-C | *** | |||||||
10859488-T-TC | *** | |||||||
10861255-C-T | *** | |||||||
10861278-C-T | *** | |||||||
10884786-CCATTT-C,CCTTTC | *** | |||||||
10893970-G-A | *** | |||||||
10916252-C-T | *** | |||||||
10939651-C-A | *** | |||||||
13579693-A-C | 11424017-A-C | *** | ||||||
14046669-TA-T | 11925963-TA-T | *** | ||||||
14988735-G-T | 12876801-G-T | *** | ||||||
15491941-GTATATATATATATATATATATATATATATATATA-G | 13380061-GTATATATATATATATATATATATATATATATATA-G | 19×TA | *** | |||||
18812256-C-A | 16700376-C-A | *** | ||||||
21042966-C-A | 18881080-C-A | *** | ||||||
21953288-T-C | 19791402-T-C | *** | ||||||
22134039-G-T | 19972153-G-T | *** | ||||||
22238366-C-T | 20076480-C-T | DYZ19 | *** | |||||
22286942-C-A | 20125056-C-A | DYZ19 | *** | |||||
22965075-C-T | 20803189-C-T | *** | ||||||
23255116-C-A | 21093230-C-A | Y111106 | *** | |||||
25592902-A-ATCTC | 23446755-A-ATCTC | P1_gr1 | *** | |||||
28784514-T-C | 26638367-T-C | *** | ||||||
56832020-CTCCATCCCATTCCATTCCGT-C,CTCCATCCCATTCCATTCCGC | *** | |||||||
56855815-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.