Big Tree: Person Data

Tree Position

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Blocks	Names	Region	McDonald BED	combBED	STR	BigY2 155090
22450695-G-A	20288809-G-A	S1322		DYZ19				A*
18319305-C-T	16207425-C-T			P6_Prx				A*
19596110-C-A	17484230-C-A			P5_Prx	Y			A*
20047817-A-C	17935937-A-C			P5_Prx				A*
22232518-T-A	20070632-T-A		ZS5688	DYZ19				A*
24257779-T-C	22111632-T-C			P3_b1				A*
24281777-A-G	22135630-A-G			P3_t1				A*
26095311-A-G	23949164-A-G			P1_Y1				A*
13451256-C-A	11295580-C-A							A*
6255916-T-G	6387875-T-G			IR3_Dst				A*
19882937-A-G	17771057-A-G			P5_Prx				A*
25971024-A-G	23824877-A-G			P1_Y1				A*
28790540-G-T	26644393-G-T							A*
28790554-T-A	26644407-T-A							A*
28817473-G-A	26671326-G-A							A*
26383340-CTT-C	24237193-CTT-C			P1_Y1			16×T	+
17922066-G-A	15810186-G-A	Z195/S355	Z195 S227		Y	Y		*
21033703-CAT-C	18871817-CAT-C	Z195/S355	S355 Z196					*
8444479-G-A	8576438-G-A	A1063	A1065		Y	Y		*
22293941-C-G	20132055-C-G	Z272	S229 Z274	DYZ19				*
22440376-G-A	20278490-G-A	Z272	Z272	DYZ19				*
8596434-C-G	8728393-C-G	BY907	S11695 SK2120		Y	Y		*
9517934-G-C	9680325-G-C	BY907	Z29697 BY907					*
13693423-C-T	11537747-C-T	BY907	Z32165					*
13705270-C-G	11549594-C-G	BY907	BY31055					*
16851387-C-A	14739507-C-A	FGC14126	FGC14126		Y	Y		*
17650871-C-A	15538991-C-A	BY907	S1306 AM00494		Y	Y		*
17651684-A-C	15539804-A-C	BY907	CTS7768 S1307 AM00495		Y	Y		*
23237563-C-A	21075677-C-A	BY907	S1319 AM00497		Y			*
28781762-C-T	26635615-C-T	S1322	CTS13028 S1322 AM00498					*
22287905-G-T	20126019-G-T		BY216201	DYZ19				*
13707530-A-G	11551854-A-G	BY907	BY31056					*
21263142-AAAC-A	19101256-AAAC-A						5×AAC	*
22484451-G-C	20322565-G-C		Z5745	DYZ19				*
8505605-G-A	8637564-G-A		Y47448		Y	Y		*
9054596-T-G	9216987-T-G		Y48141 BY31061			Y		*
9382832-C-A	9545223-C-A		BY31062		Y			*
14063962-T-C	11943256-T-C		BY31063 Y48935		Y	Y		*
15569750-T-C	13457870-T-C		BY31064		Y	Y		*
16732676-C-A	14620796-C-A		BY31065 Y52257		Y	Y		*
17344256-T-A	15232376-T-A		Y53122		Y	Y		*
17909188-C-T	15797308-C-T		Y53907 BY31066		Y	Y		*
18065479-G-T	15953599-G-T		BY31067 Y54159		Y	Y		*
18126204-C-T	16014324-C-T		BY31068 Y54287		Y	Y		*
21319522-G-A	19157636-G-A	BY31060	BY31069 Y56529		Y	Y		*
21384338-A-G	19222452-A-G		BY31070 Y56599		Y	Y		*
21513252-T-C	19351366-T-C		Y56821 BY31071		Y	Y		*
21660382-C-T	19498496-C-T		BY31072 Y57033		Y	Y		*
21781994-G-A	19620108-G-A	BY31060	ZS5898		Y	Y		*
22041924-A-G	19880038-A-G		Y57552 BY31073		Y	Y		*
22215764-C-T	20053878-C-T		Y57785 BY31075		Y			*
22469603-G-A	20307717-G-A		BY31076	DYZ19				*
23314671-G-C	21152785-G-C		Y59024 BY31078		Y	Y		*
17657694-A-AT	15545814-A-AT							*
6225531-A-C	6357490-A-C		BY189694	IR3_Dst				*
6875843-C-T	7007802-C-T		BY189757		Y	Y		*
7262485-G-A	7394444-G-A		BY189827		Y	Y		*
7312257-G-A	7444216-G-A		BY189838		Y	Y		*
9005440-C-T	9167831-C-T		BY190276			Y		*
14294565-C-A	12173859-C-A		BY190541		Y	Y		*
14535908-C-G	12424109-C-G		BY96350		Y	Y		*
15029917-G-A	12918005-G-A		BY99237		Y	Y		*
16092302-C-CT	13980422-C-CT							*
17198266-A-G	15086386-A-G		BY191093		Y	Y		*
17584458-C-A	15472578-C-A		BY191179		Y	Y		*
17971111-T-A	15859231-T-A		BY191283		Y	Y		*
20662910-G-A	18501024-G-A		BY212269	P4_Prx				*
21411036-A-G	19249150-A-G		BY191714		Y	Y		*
21456432-A-C	19294546-A-C		BY191727		Y	Y		*
21477340-G-A	19315454-G-A		BY191737		Y	Y		*
21723912-G-C	19562026-G-C		BY134988		Y	Y		*
22275245-G-A	20113359-G-A			DYZ19				*
22294121-G-T	20132235-G-T		BY216479	DYZ19				*
22887231-T-A	20725345-T-A		BY141407		Y	Y		*
23589271-A-G	21427385-A-G		BY192228		Y	Y		*
23873804-C-G	21711918-C-G		BY192277			Y		*
19036703-G-GTT	16924823-G-GTT						40×T	**
16401981-G-GTA	14290101-G-GTA						9×TA	**
6631746-T-G	6763705-T-G	BY907	DF17 AM00499 S455					**
18204985-C-A	16093105-C-A						23×A	**
13222643-G-A	11066967-G-A							**
9836887-TG-T	9999278-TG-T							**
13258359-A-T	11102683-A-T						9×T	**
59003743-A-G	56857596-A-G							**
16364058-CTATATATATATA-C	14252178-CTATATATATATA-C						27×TA	**
3790864-A-G	3922823-A-G							**
4113116-TAAA-T	4245075-TAAA-T						16×A	**
28549247-G-T	26403100-G-T							**
	56734840-G-C							**
	56734845-G-C							**
22277820-G-T	20115934-G-T			DYZ19				**
	10992381-T-A							**
15323491-C-A	13211609-C-A							**
15491937-GTGTGTA-G	13380057-GTGTGTA-G							**
28462085-C-A	26315938-C-A							**
15400167-C-CAA	13288287-C-CAA						14×A	**
27872479-GAA-G	25726332-GAA-G			P1_Y2			10×A	**
16298612-T-A	14186732-T-A							**
6516602-C-A	6648561-C-A							**
	10958828-T-A							**
	10770595-C-T							**
4179020-T-TAA	4310979-T-TAA						17×A	**
19439630-AT-A	17327750-AT-A							**
	10692049-A-C							**
	10692052-A-C							**
	10692062-C-A							**
26170423-AAAGAAG-A	24024276-AAAGAAG-A			P1_Y1			9×AAG	**
	10943064-T-C							**
22253222-G-T	20091336-G-T			DYZ19				**
	10959296-T-TGC							**
27583177-G-T	25437030-G-T			P1_Y2				**
	10755658-T-A							**
19356413-A-C	17244533-A-C							**
14566480-C-A	12454680-C-A							**
	10840895-G-T							**
22146771-C-A	19984885-C-A							**
17420932-C-A	15309052-C-A							**
26383328-C-A	24237181-C-A			P1_Y1				**
3158851-C-A	3290810-C-A							**
	10685889-T-C							**
	10685897-G-A							**
	10763143-CTCCATTCCAT-C							**
	11006436-T-C							**
7156697-C-A	7288656-C-A							**
26383322-C-A	24237175-C-A			P1_Y1				**
26383339-G-T	24237192-G-T			P1_Y1				**
13597095-C-A	11441419-C-A							**
	10653847-C-T							**
	10653884-C-A							**
	10653911-C-T							**
	11646250-A-ATCAACCCCTG							**
17346138-C-A	15234258-C-A							**
28406869-CA-C	26260722-CA-C			P1_gr2				**
	10943096-C-A							**
	10943109-T-C							**
	10693645-C-A							**
19376196-G-T	17264316-G-T							**
	56842222-T-G							**
	56842238-C-A							**
	56842252-T-A							**
6693284-C-A	6825243-C-A							**
	10770572-CCACCT-C							**
18740864-A-T	16628984-A-T							**
	10992355-C-A							**
	10927245-A-G							**
13987196-C-A	11866490-C-A							**
3550645-C-A	3682604-C-A							**
22963394-A-C	20801508-A-C							**
21515706-CAA-C	19353820-CAA-C							**
21515743-G-A	19353857-G-A							**
	10957973-C-A		FT92108					**
	10807065-T-C							**
	10885123-A-T							**
9191040-A-T	9353431-A-T							**
9191060-G-T	9353451-G-T							**
	11021348-T-TTTCCGTTCCA							**
	10939706-TCATTG-T							**
	10939718-A-T							**
4293046-C-A	4425005-C-A							**
4918270-G-A	5050229-G-A							**
15700339-C-A	13588459-C-A							**
	10658601-C-A							**
	10754987-C-T							**
7160625-C-T	7292584-C-T							**
18740851-TATAA-T	16628971-TATAA-T							**
	10807060-C-G							**
	10807085-C-G							**
28545301-G-T	26399154-G-T							**
	10825264-C-A							**
28645845-C-A	26499698-C-A							**
7132016-C-A	7263975-C-A							**
16904664-C-A	14792784-C-A		FTB45743				40×A	**
19873497-G-T	17761617-G-T			P5_Prx				**
	10991629-C-A							**
26383337-C-G	24237190-C-G			P1_Y1				**
21132677-C-A	18970791-C-A							**
7256031-G-T	7387990-G-T		FT148813					**
18819615-C-A	16707735-C-A							**
	10900010-C-A							**
	11022400-T-C							**
7172515-A-C	7304474-A-C							**
8723721-C-A	8855680-C-A							**
	10956509-C-A							**
21072233-C-A	18910347-C-A							**
	10942953-G-T							**
	10791345-C-T							**
21037512-C-A	18875626-C-A							**
14366844-C-A	12246139-C-A							**
	11027040-A-T							**
	11027054-C-G							**
	11027061-T-A							**
	11027066-C-T		FT409410					**
21515733-G-C	19353847-G-C							**
21515734-G-A	19353848-G-A							**
22774864-C-A	20612978-C-A							**
21515777-G-T	19353891-G-T							**
21515778-A-G	19353892-A-G		Z38170					**
21515780-G-T	19353894-G-T							**
	10746644-T-A							**
13870763-C-A	11750057-C-A							**
	10914456-G-A							**
	10967512-C-A							**
21515723-C-T	19353837-C-T							**
	10992347-C-A							**
	10844210-C-A							**
7396357-C-A	7528316-C-A							**
9191048-A-T	9353439-A-T							**
	10961225-C-A							**
7131369-A-C	7263328-A-C							**
	11001995-C-T							**
24276835-A-C	22130688-A-C			P3_b1				**
	11646239-A-AT							**
	11646240-AT-A							**
	11646247-G-T							**
6461055-C-A	6593014-C-A							**
	11022404-A-C							**
24404485-A-C	22258338-A-C							**
23097911-C-A	20936025-C-A							**
	56841494-A-G							**
17346126-G-T	15234246-G-T							**
	10807078-C-A							**
28605533-C-A	26459386-C-A							**
	10906823-G-T		FT262845					**
	10835589-T-G							**
	10884467-C-T							**
8713097-C-A	8845056-C-A							**
19439639-A-G	17327759-A-G							**
7229045-C-A	7361004-C-A							**
	56829972-C-A							**
	10969238-C-A							**
23059654-A-C	20897768-A-C							**
	10875820-C-A							**
21939545-C-A	19777659-C-A							**
21515788-G-A	19353902-G-A							**
	10958856-C-A							**
	10678669-A-G							**
28800767-T-A	26654620-T-A							**
13540233-C-A	11384557-C-A							**
17127355-C-A	15015475-C-A							**
2859161-T-A	2991120-T-A							**
2926383-A-G	3058342-A-G							**
3025843-G-T	3157802-G-T							**
3110402-G-T	3242361-G-T							**
3131092-C-A	3263051-C-A							**
3267728-A-T	3399687-A-T							**
3990590-T-C	4122549-T-C							**
4049672-C-A	4181631-C-A							**
4123997-G-A	4255956-G-A							**
4208826-G-A	4340785-G-A							**
4215884-G-T	4347843-G-T							**
4498320-G-T	4630279-G-T							**
4871848-T-G	5003807-T-G							**
4908252-C-A	5040211-C-A							**
4946615-G-T	5078574-G-T							**
5258701-A-G	5390660-A-G							**
5761111-C-A	5893070-C-A							**
5780064-G-T	5912023-G-T							**
5867291-T-G	5999250-T-G							**
5869982-C-TA	6001941-C-TA						11×T	**
6028902-T-G	6160861-T-G							**
6978437-G-T	7110396-G-T							**
7088541-C-A	7220500-C-A							**
7143436-T-G	7275395-T-G							**
7160646-G-A	7292605-G-A							**
7228440-G-A	7360399-G-A		FT28920					**
7228443-T-G	7360402-T-G							**
7332993-C-T	7464952-C-T							**
7339744-C-A	7471703-C-A		FTA49456					**
7339753-T-G	7471712-T-G							**
7434927-C-G	7566886-C-G							**
7768718-A-T	7900677-A-T							**
7868816-A-G	8000775-A-G							**
8080133-G-T	8212092-G-T							**
8109949-C-T	8241908-C-T							**
8109954-T-C	8241913-T-C		FTA9341					**
8171953-C-A	8303912-C-A							**
8741609-G-T	8873568-G-T							**
8856908-CT-C	8988867-CT-C							**
9014305-C-G	9176696-C-G							**
9063107-T-G	9225498-T-G							**
9082341-C-T	9244732-C-T		Y48164					**
9191036-C-G	9353427-C-G							**
9191050-A-T	9353441-A-T							**
9191068-C-A	9353459-C-A							**
9191076-A-T	9353467-A-T						20×AC	**
9211549-C-A	9373940-C-A							**
9442396-G-T	9604787-G-T							**
9465132-G-T	9627523-G-T							**
9961355-A-C	10123746-A-C							**
9975225-T-G	10137616-T-G							**
9978082-T-G	10140473-T-G							**
10035996-G-T	10198387-G-T							**
	10653850-G-A							**
	10661024-C-A							**
	10663396-TTTCCA-T							**
	10668968-A-C							**
	10672313-G-T							**
	10677385-G-T							**
	10685801-C-A							**
	10685811-CCA-C							**
	10685816-C-CCT							**
	10685822-CA-C							**
	10685832-C-T							**
	10685836-A-C							**
	10685844-T-A							**
	10746621-T-C							**
	10746627-CTATTA-C							**
	10746640-T-C							**
	10746661-TC-T							**
	10760435-T-G							**
	10760437-C-T							**
	10769654-C-T							**
	10770545-A-G							**
	10770572-C-G							**
	10770598-C-T							**
	10785255-T-G							**
	10789351-A-AGTTGGTGCAAATACT							**
	10791306-C-T							**
	10791315-C-CCTTTA							**
	10791333-T-C							**
	10793405-G-T							**
	10800395-C-A							**
	10814333-C-A							**
	10825286-A-AATTAC							**
	10830858-G-A							**
	10835587-C-G							**
	10848851-C-A							**
	10878518-C-A							**
	10906626-A-G							**
	10914419-T-A							**
	10914430-A-G							**
	10914438-CT-C							**
	10914450-A-C							**
	10914455-A-T							**
	10914457-C-T							**
	10927213-A-G							**
	10934003-C-A							**
	10957948-T-A							**
	10959769-C-A							**
	10959860-C-A							**
	10964784-TTCCACTCCAC-T							**
	10973498-T-C							**
	10989982-A-C							**
	10992332-T-TTTCATTC							**
	10995512-C-A		FT439639					**
	11006479-C-A							**
	11006483-C-G							**
	11007242-T-A							**
	11015577-C-T							**
	11031637-G-T							**
13253526-T-A	11097850-T-A							**
13255766-C-A	11100090-C-A							**
13321583-G-T	11165907-G-T							**
13460421-A-T	11304745-A-T							**
13484756-A-T	11329080-A-T							**
13512571-T-C	11356895-T-C							**
13540218-G-T	11384542-G-T							**
13540242-G-T	11384566-G-T							**
13596361-C-A	11440685-C-A							**
13623528-C-A	11467852-C-A							**
13642462-A-G	11486786-A-G							**
13696829-G-T	11541153-G-T							**
13856656-C-G	11735950-C-G							**
13921089-T-C	11800383-T-C							**
14032478-C-A	11911772-C-A							**
14060650-G-T	11939944-G-T							**
14065538-G-A	11944832-G-A							**
14071549-C-CGT	11950843-C-CGT							**
14080016-A-C	11959310-A-C							**
14098731-T-A	11978025-T-A							**
14158220-C-T	12037514-C-T							**
14158227-G-A	12037521-G-A							**
14281017-A-C	12160311-A-C							**
14424119-T-G	12303394-T-G							**
14449381-G-A	12328654-G-A							**
14520785-G-T	12408986-G-T							**
14551650-C-A	12439851-C-A							**
14557897-C-A	12446098-C-A							**
14566412-C-G	12454612-C-G							**
14566448-A-G	12454648-A-G							**
14566459-A-G	12454659-A-G							**
14566465-C-T	12454665-C-T							**
14566466-C-T	12454666-C-T							**
14566474-T-A	12454674-T-A							**
14777056-C-T	12665125-C-T							**
14798792-C-A	12686863-C-A							**
14846874-G-T	12734940-G-T							**
14949170-G-C	12837244-G-C							**
15034901-A-C	12922989-A-C							**
15077938-C-A	12966028-C-A							**
15258408-A-G	13146492-A-G							**
15302648-C-A	13190747-C-A							**
15393892-A-C	13282012-A-C							**
15428316-A-T	13316436-A-T							**
15576877-T-C	13464997-T-C							**
15605802-C-A	13493922-C-A							**
15786628-T-C	13674748-T-C							**
15801672-A-C	13689792-A-C							**
15943018-A-C	13831138-A-C							**
16101986-G-T	13990106-G-T			P8_Prx				**
16101994-G-T	13990114-G-T			P8_Prx				**
16276177-T-G	14164297-T-G							**
16298615-AC-A	14186735-AC-A							**
16302535-C-A	14190655-C-A							**
16623504-G-T	14511624-G-T							**
16988798-C-A	14876918-C-A							**
17153608-G-T	15041728-G-T							**
17283130-C-G	15171250-C-G							**
17362795-C-A	15250915-C-A							**
17367546-T-A	15255666-T-A							**
17425221-C-A	15313341-C-A							**
17683096-T-C	15571216-T-C							**
17953952-G-A	15842072-G-A							**
18106733-C-A	15994853-C-A							**
18365679-T-C	16253799-T-C			P6_Prx				**
18397926-A-G	16286046-A-G			P6_Gap				**
18430055-A-C	16318175-A-C			P6_Dst				**
18530998-C-A	16419118-C-A			P6_Dst				**
18692685-C-A	16580805-C-A							**
18901271-A-C	16789391-A-C							**
19077209-T-A	16965329-T-A							**
19121863-C-A	17009983-C-A							**
19126406-A-C	17014526-A-C							**
19126413-A-T	17014533-A-T							**
19331734-C-A	17219854-C-A							**
19377202-AAG-A	17265322-AAG-A							**
19436756-G-T	17324876-G-T							**
19436809-A-T	17324929-A-T							**
19439640-T-A	17327760-T-A							**
19554430-T-C	17442550-T-C							**
19558808-T-C	17446928-T-C							**
19583657-C-A	17471777-C-A			P5_Prx				**
19583685-A-T	17471805-A-T			P5_Prx				**
19583695-G-T	17471815-G-T			P5_Prx				**
19583703-A-C	17471823-A-C			P5_Prx				**
19775271-A-T	17663391-A-T			P5_Prx				**
19867106-T-A	17755226-T-A			P5_Prx				**
20028089-C-A	17916209-C-A			P5_Prx				**
20252821-G-GC	18090935-G-GC			P5_Dst				**
20815483-A-T	18653597-A-T			P4_Gap				**
21023198-C-T	18861312-C-T			P4_Dst				**
21023223-A-T	18861337-A-T			P4_Dst				**
21023226-C-A	18861340-C-A			P4_Dst				**
21023230-C-A	18861344-C-A			P4_Dst				**
21023235-G-T	18861349-G-T			P4_Dst			8×T	**
21092217-A-C	18930331-A-C							**
21306643-G-T	19144757-G-T							**
21383413-C-A	19221527-C-A		Y106299					**
21427653-C-A	19265767-C-A							**
21468277-A-G	19306391-A-G							**
21515767-G-C	19353881-G-C							**
21545392-C-A	19383506-C-A							**
21614715-G-T	19452829-G-T							**
21827823-C-T	19665937-C-T		Y107621					**
21909425-T-C	19747539-T-C							**
22149927-A-C	19988041-A-C							**
22991191-CA-C	20829305-CA-C							**
23006927-T-C	20845041-T-C							**
23167764-C-A	21005878-C-A							**
23294135-C-A	21132249-C-A							**
23414142-T-G	21252256-T-G							**
23512177-G-T	21350291-G-T							**
23516456-G-T	21354570-G-T							**
23802273-C-G	21640387-C-G							**
23856983-A-G	21695097-A-G							**
23881906-G-A	21720020-G-A							**
24267228-C-CAA	22121081-C-CAA			P3_b1				**
24276778-A-C	22130631-A-C			P3_b1				**
24276858-A-C	22130711-A-C			P3_b1				**
24276862-A-C	22130715-A-C			P3_b1				**
26247368-C-T	24101221-C-T			P1_Y1				**
26355372-C-A	24209225-C-A			P1_Y1				**
26415613-C-T	24269466-C-T			P1_Y1				**
27595930-T-C	25449783-T-C			P1_Y2				**
28006524-C-A	25860377-C-A			P1_Y2				**
28492022-G-A	26345875-G-A							**
28560166-T-G	26414019-T-G							**
28653819-C-A	26507672-C-A							**
28800794-G-T	26654647-G-T							**
28818371-G-T	26672224-G-T							**
58984829-C-A	56838682-C-A							**
	56849095-G-A							**
	56851562-C-T							**
	56879671-A-C							**
17292636-C-CT	15180756-C-CT						10×T	***
8849102-C-G	8981061-C-G	FGC14113	FGC14113 Y3470					***
9577022-A-C	9739413-A-C	ZZ61 BY907	A19290	IR3_Prx				***
21265178-G-A	19103292-G-A	BY907	S1313 AM00496					***
2747768-CAT-C	2879727-CAT-C							***
19411918-G-GA	17300038-G-GA							***
13453693-C-T	11298017-C-T							***
8888484-A-G	9020443-A-G	BY31060	Y48060 BY31060					***
18052272-G-A	15940392-G-A		Y54135					***
21972117-A-C	19810231-A-C		Y57446					***
22189651-C-T	20027765-C-T		BY31074					***
22834798-C-A	20672912-C-A		Y58361 BY31077					***
2836350-CTTTTT-C	2968309-CTTTTT-C						19×T	***
	11026015-TTCCAC-T							***
21986619-C-CT	19824733-C-CT						8×T	***
17637638-AACACAC-A	15525758-AACACAC-A						21×AC	***
	11004425-C-T							***
16188181-CTTT-C,CTT	14076301-CTTT-C,CTT						16×T	***
	10776502-C-CGGATG							***
	10799642-C-G							***
13719473-A-G	11563797-A-G							***
23351487-A-AT	21189601-A-AT						9×T	***
22360939-C-A	20199053-C-A			DYZ19				***
13453692-C-T	11298016-C-T							***
	10789365-C-A							***
16831663-C-CTT	14719783-C-CTT						12×T	***
15211049-G-T	13099135-G-T							***
16237221-ATTTT-A	14125341-ATTTT-A						16×T	***
15048489-GTT-G,GT	12936580-GTT-G,GT						19×T	***
	11004509-G-C							***
	11004520-G-C							***
	10969256-C-G							***
	10969257-A-G							***
	10969240-C-A							***
7126524-CTTTT-C	7258483-CTTTT-C						23×T	***
	10987913-C-A							***
2752415-TAAAAA-T	2884374-TAAAAA-T						23×A	***
	10776522-CA-C,CG							***
4244745-T-C	4376704-T-C							***
6427686-C-A	6559645-C-A							***
7195227-CAAAA-C,CAAAAA	7327186-CAAAA-C,CAAAAA						17×A	***
9434550-T-TA	9596941-T-TA						8×A	***
9500240-T-C	9662631-T-C							***
9807701-C-A	9970092-C-A							***
9836934-C-A	9999325-C-A							***
	10762672-G-T							***
	10776516-C-A							***
14547173-C-A	12435374-C-A							***
15161292-GAAAAA-G	13049378-GAAAAA-G						22×A	***
15174510-C-A	13062596-C-A							***
15258371-T-C	13146455-T-C		FT63078					***
15419173-C-A	13307293-C-A							***
15520492-C-A	13408612-C-A							***
15565341-C-A	13453461-C-A							***
15956785-T-C	13844905-T-C							***
16060068-C-A	13948188-C-A		FT146768					***
16292051-C-A	14180171-C-A							***
17082077-C-A	14970197-C-A							***
17302965-C-A	15191085-C-A							***
17564903-C-A	15453023-C-A							***
17951464-TCT-T,TCA	15839584-TCT-T,TCA							***
18564299-C-A	16452419-C-A							***
18761855-C-T	16649975-C-T							***
19022251-G-T	16910371-G-T							***
19125713-AAAAAAT-A	17013833-AAAAAAT-A							***
19411143-C-A	17299263-C-A							***
21133556-CAAA-C,CA	18971670-CAAA-C,CA						23×A	***
21194348-C-A	19032462-C-A							***
21651010-C-A	19489124-C-A							***
21715275-T-A	19553389-T-A		BY134915					***
21732690-A-AT	19570804-A-AT						8×T	***
21858578-A-T	19696692-A-T		FT127386					***
21918136-T-C	19756250-T-C							***
23439249-C-A	21277363-C-A							***
24047570-G-T	21901423-G-T							***
24109159-G-T	21963012-G-T			P3_b1				***
28549859-C-A	26403712-C-A							***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Carragher

Tree Position

Unique Mutations