unknown
BigY2: B129471Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 B129471 |
---|---|---|---|---|---|---|---|
hg19:Y:24286643-C-T hg38:Y:22140496-C-T | P3_t1 | A* | |||||
hg19:Y:8284009-G-A hg38:Y:8415968-G-A | BY71397 | Y | Y | + | |||
hg19:Y:14186009-T-C hg38:Y:12065303-T-C | BY93644 | Y | Y | + | |||
hg19:Y:15908673-T-C hg38:Y:13796793-T-C | BY104852 | Y | Y | + | |||
hg19:Y:21051156-C-CT hg38:Y:18889270-C-CT | + | ||||||
hg19:Y:16813075-G-GCA hg38:Y:14701195-G-GCA | 15×CA | * | |||||
hg19:Y:22253778-C-A hg38:Y:20091892-C-A | BY214157 | DYZ19 | * | ||||
hg19:Y:22280254-A-T hg38:Y:20118368-A-T | DYZ19 | * | |||||
hg19:Y:13858155-T-G hg38:Y:11737449-T-G | DYZ17 | ** | |||||
hg19:Y:6948088-G-T hg38:Y:7080047-G-T | ** | ||||||
hg19:Y:59030572-TTA-T hg38:Y:56884425-TTA-T | 8×TA | ** | |||||
hg19:Y:6752081-TA-T hg38:Y:6884040-TA-T | 8×A | ** | |||||
hg19:Y:58819772-G-C hg38:Y:56771099-C-G | ** | ||||||
hg19:Y:21635242-C-A hg38:Y:19473356-C-A | ** | ||||||
hg38:Y:10889478-T-C | ** | ||||||
hg38:Y:10889482-C-A | ** | ||||||
hg38:Y:10889494-A-G | ** | ||||||
hg38:Y:11643664-G-C | DYZ17 | ** | |||||
hg38:Y:11035628-C-A | ** | ||||||
hg38:Y:11035635-T-G | ** | ||||||
hg38:Y:11035639-G-C | ** | ||||||
hg38:Y:11035644-C-T | ** | ||||||
hg19:Y:13710215-A-G hg38:Y:11554539-A-G | DYZ17 | ** | |||||
hg38:Y:10989138-A-T | ** | ||||||
hg38:Y:10807037-G-T | ** | ||||||
hg38:Y:10807081-TGCA-T | ** | ||||||
hg38:Y:10807087-GCA-G | ** | ||||||
hg19:Y:5021862-C-A hg38:Y:5153821-C-A | ** | ||||||
hg38:Y:10974795-CTCCACTCCGT-C | ** | ||||||
hg19:Y:15698488-T-A hg38:Y:13586608-T-A | ** | ||||||
hg19:Y:7186720-C-A hg38:Y:7318679-C-A | ** | ||||||
hg19:Y:2686435-CAAA-C hg38:Y:2818394-CAAA-C | 13×A | ** | |||||
hg19:Y:17956056-CTTT-C hg38:Y:15844176-CTTT-C | 13×T | ** | |||||
hg38:Y:10796119-T-C | ** | ||||||
hg19:Y:13507006-G-A hg38:Y:11351330-G-A | ** | ||||||
hg38:Y:10804812-T-C | ** | ||||||
hg19:Y:21012318-T-A hg38:Y:18850432-T-A | P4_Dst | ** | |||||
hg19:Y:16481108-C-A hg38:Y:14369228-C-A | ** | ||||||
hg19:Y:25524729-GAC-A hg38:Y:23378582-GAC-A | P1_gr1 | ** | |||||
hg38:Y:11015254-G-C | ** | ||||||
hg19:Y:24247416-CA-C hg38:Y:22101269-CA-C | P3_b1 | ** | |||||
hg38:Y:56771104-C-G | 4×AATGG | ** | |||||
hg19:Y:18465509-A-T hg38:Y:16353629-A-T | P6_Dst | ** | |||||
hg19:Y:16494357-C-CTA hg38:Y:14382477-C-CTA | ** | ||||||
hg19:Y:6262644-AC-A hg38:Y:6394603-AC-A | IR3_Dst | ** | |||||
hg38:Y:10974757-C-A | ** | ||||||
hg38:Y:10997209-G-T | ** | ||||||
hg19:Y:24904721-T-A hg38:Y:22758574-T-A | g1 | ** | |||||
hg38:Y:10889481-G-T | ** | ||||||
hg38:Y:11643674-G-A | DYZ17 | ** | |||||
hg38:Y:10669532-T-C | ** | ||||||
hg38:Y:11016916-G-T | ** | ||||||
hg19:Y:14938650-G-A hg38:Y:12826724-G-A | ** | ||||||
hg38:Y:10756683-C-G | ** | ||||||
hg38:Y:10952155-A-C | ** | ||||||
hg19:Y:15793432-C-A hg38:Y:13681552-C-A | ** | ||||||
hg38:Y:10997159-C-A | ** | ||||||
hg19:Y:21162903-C-A hg38:Y:19001017-C-A | ** | ||||||
hg38:Y:10912292-A-T | ** | ||||||
hg38:Y:10992788-T-G | ** | ||||||
hg38:Y:10992801-C-T | ** | ||||||
hg19:Y:2986106-C-A hg38:Y:3118065-C-A | ** | ||||||
hg38:Y:10816493-G-T | ** | ||||||
hg38:Y:10934748-T-G | ** | ||||||
hg38:Y:10885109-C-A | ** | ||||||
hg19:Y:18050337-C-A hg38:Y:15938457-C-A | ** | ||||||
hg19:Y:13457510-C-A hg38:Y:11301834-C-A | ** | ||||||
hg38:Y:10831562-A-T | ** | ||||||
hg38:Y:10952144-C-G | ** | ||||||
hg19:Y:18253438-C-A hg38:Y:16141558-C-A | ** | ||||||
hg19:Y:8501688-G-T hg38:Y:8633647-G-T | ** | ||||||
hg19:Y:2747818-AAT-A hg38:Y:2879777-AAT-A | ** | ||||||
hg38:Y:10795094-T-C | ** | ||||||
hg19:Y:8691890-C-A hg38:Y:8823849-C-A | ** | ||||||
hg38:Y:10671185-C-T | ** | ||||||
hg38:Y:10756701-A-T | ** | ||||||
hg19:Y:5263521-C-A hg38:Y:5395480-C-A | ** | ||||||
hg19:Y:13855235-C-A hg38:Y:11734529-C-A | DYZ17 | ** | |||||
hg19:Y:21012257-G-T hg38:Y:18850371-G-T | P4_Dst | ** | |||||
hg38:Y:10630492-C-A | 10×CCATT | ** | |||||
hg38:Y:10767785-C-A | ** | ||||||
hg19:Y:7164557-C-A hg38:Y:7296516-C-A | ** | ||||||
hg38:Y:10964609-C-A | ** | ||||||
hg38:Y:10691149-C-T | ** | ||||||
hg38:Y:10927252-C-A | ** | ||||||
hg38:Y:21752809-G-T | ** | ||||||
hg19:Y:8501532-CTCT-C hg38:Y:8633491-CTCT-C | ** | ||||||
hg38:Y:10974755-C-A | ** | ||||||
hg38:Y:10941686-T-C | ** | ||||||
hg38:Y:10691176-C-A | ** | ||||||
hg19:Y:13461055-G-C hg38:Y:11305379-G-C | ** | ||||||
hg19:Y:7208125-C-A hg38:Y:7340084-C-A | ** | ||||||
hg19:Y:10024137-GTC-G hg38:Y:10186528-GTC-G | ** | ||||||
hg38:Y:10666999-C-A | ** | ||||||
hg38:Y:10744273-A-T | ** | ||||||
hg19:Y:21368769-C-A hg38:Y:19206883-C-A | ** | ||||||
hg38:Y:10974759-T-C | ** | ||||||
hg38:Y:10809187-C-A | ** | ||||||
hg38:Y:10691179-C-T | ** | ||||||
hg19:Y:17737947-C-A hg38:Y:15626067-C-A | ** | ||||||
hg38:Y:10686626-C-A | ** | ||||||
hg38:Y:10691139-T-C | ** | ||||||
hg38:Y:10783896-T-A | ** | ||||||
hg38:Y:10783921-C-T | ** | ||||||
hg19:Y:24276486-A-AC hg38:Y:22130339-A-AC | P3_b1 | ** | |||||
hg38:Y:10814223-C-A | ** | ||||||
hg19:Y:2856558-C-A hg38:Y:2988517-C-A | ** | ||||||
hg19:Y:17104050-G-T hg38:Y:14992170-G-T | ** | ||||||
hg38:Y:10886436-A-C | ** | ||||||
hg19:Y:28006824-C-A hg38:Y:25860677-C-A | P1_Y2 | ** | |||||
hg19:Y:16701742-G-A hg38:Y:14589862-G-A | FT405706 | ** | |||||
hg38:Y:10856427-A-C | ** | ||||||
hg19:Y:13452873-GCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTC-G hg38:Y:11297197-GCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTC-G | 14×CATTC | ** | |||||
hg19:Y:15427488-C-A hg38:Y:13315608-C-A | ** | ||||||
hg19:Y:5231912-TG-T hg38:Y:5363871-TG-T | ** | ||||||
hg38:Y:10754900-T-C | ** | ||||||
hg19:Y:13287248-C-A hg38:Y:11131572-C-A | ** | ||||||
hg38:Y:11035570-A-T | ** | ||||||
hg38:Y:11035579-CACTCTACTCG-C | ** | ||||||
hg19:Y:5869638-C-A hg38:Y:6001597-C-A | ** | ||||||
hg19:Y:9942211-C-A hg38:Y:10104602-C-A | ** | ||||||
hg38:Y:10790046-C-A | ** | ||||||
hg19:Y:7939781-C-A hg38:Y:8071740-C-A | ** | ||||||
hg19:Y:8119229-C-A hg38:Y:8251188-C-A | ** | ||||||
hg19:Y:20104252-GGGGGGAGAGA-G hg38:Y:17992372-GGGGGGAGAGA-G | P5_Dst | ** | |||||
hg38:Y:11035538-C-G | ** | ||||||
hg38:Y:10781102-C-A | ** | ||||||
hg19:Y:16412292-C-A hg38:Y:14300412-C-A | ** | ||||||
hg19:Y:16702241-A-C hg38:Y:14590361-A-C | ** | ||||||
hg38:Y:10744243-A-T | ** | ||||||
hg38:Y:10744261-C-A | ** | ||||||
hg19:Y:18246359-G-T hg38:Y:16134479-G-T | ** | ||||||
hg38:Y:10689075-CT-C | ** | ||||||
hg19:Y:8913313-A-C hg38:Y:9045272-A-C | ** | ||||||
hg38:Y:10794234-C-A | ** | ||||||
hg38:Y:10783922-T-C | ** | ||||||
hg19:Y:6295526-T-G hg38:Y:6427485-T-G | IR3_Dst | ** | |||||
hg38:Y:10811880-G-C | ** | ||||||
hg19:Y:2706674-A-C hg38:Y:2838633-A-C | ** | ||||||
hg19:Y:2729626-C-A hg38:Y:2861585-C-A | ** | ||||||
hg19:Y:2768214-G-T hg38:Y:2900173-G-T | ** | ||||||
hg19:Y:2817168-C-A hg38:Y:2949127-C-A | ** | ||||||
hg19:Y:3023110-A-T hg38:Y:3155069-A-T | ** | ||||||
hg19:Y:3131376-G-T hg38:Y:3263335-G-T | ** | ||||||
hg19:Y:3325661-G-T hg38:Y:3457620-G-T | ** | ||||||
hg19:Y:3444038-G-A hg38:Y:3575997-G-A | ** | ||||||
hg19:Y:3452032-C-A hg38:Y:3583991-C-A | ** | ||||||
hg19:Y:3854040-T-C hg38:Y:3985999-T-C | ** | ||||||
hg19:Y:3859661-G-T hg38:Y:3991620-G-T | ** | ||||||
hg19:Y:4226063-T-G hg38:Y:4358022-T-G | ** | ||||||
hg19:Y:4244342-C-A hg38:Y:4376301-C-A | ** | ||||||
hg19:Y:4250717-G-T hg38:Y:4382676-G-T | ** | ||||||
hg19:Y:4422496-C-A hg38:Y:4554455-C-A | ** | ||||||
hg19:Y:4422603-A-C hg38:Y:4554562-A-C | ** | ||||||
hg19:Y:4426635-C-A hg38:Y:4558594-C-A | ** | ||||||
hg19:Y:4426775-C-A hg38:Y:4558734-C-A | ** | ||||||
hg19:Y:4497342-A-C hg38:Y:4629301-A-C | ** | ||||||
hg19:Y:4497361-A-C hg38:Y:4629320-A-C | ** | ||||||
hg19:Y:4561349-C-A hg38:Y:4693308-C-A | FT129857 | ** | |||||
hg19:Y:4575570-G-T hg38:Y:4707529-G-T | ** | ||||||
hg19:Y:4788680-C-A hg38:Y:4920639-C-A | ** | ||||||
hg19:Y:4849899-T-G hg38:Y:4981858-T-G | ** | ||||||
hg19:Y:4850009-T-C hg38:Y:4981968-T-C | ** | ||||||
hg19:Y:4856551-G-T hg38:Y:4988510-G-T | ** | ||||||
hg19:Y:5003482-G-T hg38:Y:5135441-G-T | ** | ||||||
hg19:Y:5200291-G-T hg38:Y:5332250-G-T | ** | ||||||
hg19:Y:5267116-G-A hg38:Y:5399075-G-A | ** | ||||||
hg19:Y:5669266-A-C hg38:Y:5801225-A-C | ** | ||||||
hg19:Y:5731846-T-G hg38:Y:5863805-T-G | ** | ||||||
hg19:Y:5731885-T-G hg38:Y:5863844-T-G | ** | ||||||
hg19:Y:5911837-C-A hg38:Y:6043796-C-A | ** | ||||||
hg19:Y:6435141-G-T hg38:Y:6567100-G-T | ** | ||||||
hg19:Y:6757213-A-C hg38:Y:6889172-A-C | ** | ||||||
hg19:Y:6828844-C-T hg38:Y:6960803-C-T | ** | ||||||
hg19:Y:6881244-C-A hg38:Y:7013203-C-A | ** | ||||||
hg19:Y:6953381-A-C hg38:Y:7085340-A-C | ** | ||||||
hg19:Y:7015742-G-T hg38:Y:7147701-G-T | ** | ||||||
hg19:Y:7081048-A-C hg38:Y:7213007-A-C | ** | ||||||
hg19:Y:7081168-A-C hg38:Y:7213127-A-C | ** | ||||||
hg19:Y:7094327-T-C hg38:Y:7226286-T-C | ** | ||||||
hg19:Y:7134692-G-A hg38:Y:7266651-G-A | FT382318 | ** | |||||
hg19:Y:7134700-T-C hg38:Y:7266659-T-C | ** | ||||||
hg19:Y:7134702-C-T hg38:Y:7266661-C-T | ** | ||||||
hg19:Y:7134705-C-G hg38:Y:7266664-C-G | ** | ||||||
hg19:Y:7183932-C-A hg38:Y:7315891-C-A | ** | ||||||
hg19:Y:7204833-T-G hg38:Y:7336792-T-G | ** | ||||||
hg19:Y:7238234-C-A hg38:Y:7370193-C-A | ** | ||||||
hg19:Y:7250207-T-C hg38:Y:7382166-T-C | ** | ||||||
hg19:Y:7254976-T-G hg38:Y:7386935-T-G | ** | ||||||
hg19:Y:7623651-C-A hg38:Y:7755610-C-A | ** | ||||||
hg19:Y:7633086-A-C hg38:Y:7765045-A-C | ** | ||||||
hg19:Y:7633095-A-G hg38:Y:7765054-A-G | ** | ||||||
hg19:Y:7633104-T-A hg38:Y:7765063-T-A | ** | ||||||
hg19:Y:7633104-T-TA hg38:Y:7765063-T-TA | ** | ||||||
hg19:Y:7853155-C-A hg38:Y:7985114-C-A | ** | ||||||
hg19:Y:7861397-T-C hg38:Y:7993356-T-C | ** | ||||||
hg19:Y:8013307-C-A hg38:Y:8145266-C-A | BY40216 | 4×TTAT | ** | ||||
hg19:Y:8016917-G-T hg38:Y:8148876-G-T | ** | ||||||
hg19:Y:8158991-T-G hg38:Y:8290950-T-G | ** | ||||||
hg19:Y:8290832-A-C hg38:Y:8422791-A-C | ** | ||||||
hg19:Y:8649878-A-T hg38:Y:8781837-A-T | ** | ||||||
hg19:Y:8738920-C-A hg38:Y:8870879-C-A | ** | ||||||
hg19:Y:9063560-C-A hg38:Y:9225951-C-A | ** | ||||||
hg19:Y:9076968-A-C hg38:Y:9239359-A-C | ** | ||||||
hg19:Y:9094283-C-A hg38:Y:9256674-C-A | ** | ||||||
hg19:Y:9309763-A-T hg38:Y:9472154-A-T | ** | ||||||
hg19:Y:9426735-A-G hg38:Y:9589126-A-G | ** | ||||||
hg19:Y:9426791-T-A hg38:Y:9589182-T-A | ** | ||||||
hg19:Y:9486112-A-C hg38:Y:9648503-A-C | ** | ||||||
hg19:Y:9509612-A-C hg38:Y:9672003-A-C | ** | ||||||
hg19:Y:9654427-G-C hg38:Y:9816818-G-C | IR3_Prx | ** | |||||
hg19:Y:9885349-C-A hg38:Y:10047740-C-A | FT381656 | ** | |||||
hg38:Y:10632729-C-A | ** | ||||||
hg38:Y:10654527-C-A | ** | ||||||
hg38:Y:10658638-C-A | ** | ||||||
hg38:Y:10659197-T-G | ** | ||||||
hg38:Y:10666958-C-A | ** | ||||||
hg38:Y:10667011-T-A | ** | ||||||
hg38:Y:10678057-C-A | ** | ||||||
hg38:Y:10686620-C-A | ** | ||||||
hg38:Y:10686636-C-T | ** | ||||||
hg38:Y:10689095-T-G | ** | ||||||
hg38:Y:10689397-T-G | ** | ||||||
hg38:Y:10691175-T-A | ** | ||||||
hg38:Y:10748088-C-A | ** | ||||||
hg38:Y:10749069-T-G | ** | ||||||
hg38:Y:10751408-C-T | ** | ||||||
hg38:Y:10751509-C-A | ** | ||||||
hg38:Y:10751512-T-G | ** | ||||||
hg38:Y:10751891-T-G | ** | ||||||
hg38:Y:10759280-T-A | ** | ||||||
hg38:Y:10759370-C-G | ** | ||||||
hg38:Y:10762556-CTCCAT-C | ** | ||||||
hg38:Y:10768378-C-T | ** | ||||||
hg38:Y:10768386-T-C | ** | ||||||
hg38:Y:10781097-C-A | ** | ||||||
hg38:Y:10792353-T-A | ** | ||||||
hg38:Y:10794288-C-G | ** | ||||||
hg38:Y:10803215-C-A | ** | ||||||
hg38:Y:10804802-T-TCCAC | ** | ||||||
hg38:Y:10806159-C-A | ** | ||||||
hg38:Y:10809328-C-T | ** | ||||||
hg38:Y:10811900-T-A | ** | ||||||
hg38:Y:10811905-A-C | FT91772 | ** | |||||
hg38:Y:10811906-C-A | ** | ||||||
hg38:Y:10811935-CCATT-C | ** | ||||||
hg38:Y:10811948-C-T | ** | ||||||
hg38:Y:10814498-C-A | ** | ||||||
hg38:Y:10816283-A-C | ** | ||||||
hg38:Y:10822154-C-A | ** | ||||||
hg38:Y:10832987-C-A | ** | ||||||
hg38:Y:10841075-T-A | ** | ||||||
hg38:Y:10856321-C-T | ** | ||||||
hg38:Y:10856326-T-C | ** | ||||||
hg38:Y:10856332-T-A | ** | ||||||
hg38:Y:10856340-T-G | ** | ||||||
hg38:Y:10856350-C-T | ** | ||||||
hg38:Y:10856351-A-C | ** | ||||||
hg38:Y:10856366-T-CA | ** | ||||||
hg38:Y:10856405-A-C | ** | ||||||
hg38:Y:10856408-A-T | ** | ||||||
hg38:Y:10856421-C-G | ** | ||||||
hg38:Y:10862572-C-A | ** | ||||||
hg38:Y:10874014-T-A | ** | ||||||
hg38:Y:10874029-T-G | ** | ||||||
hg38:Y:10874183-A-T | ** | ||||||
hg38:Y:10874187-A-T | ** | ||||||
hg38:Y:10874192-A-T | ** | ||||||
hg38:Y:10874197-A-T | ** | ||||||
hg38:Y:10886433-A-C | ** | ||||||
hg38:Y:10914024-T-A | ** | ||||||
hg38:Y:10933125-C-A | ** | ||||||
hg38:Y:10937605-C-G | ** | ||||||
hg38:Y:10940503-T-G | ** | ||||||
hg38:Y:10941001-C-A | ** | ||||||
hg38:Y:10949889-C-A | ** | ||||||
hg38:Y:10952112-T-G | ** | ||||||
hg38:Y:10965573-C-A | ** | ||||||
hg38:Y:10971457-C-A | ** | ||||||
hg38:Y:10974001-TCA-T | ** | ||||||
hg38:Y:10983150-C-A | ** | ||||||
hg38:Y:11007503-C-T | FT393474 | ** | |||||
hg38:Y:11015257-T-A | ** | ||||||
hg38:Y:11015258-C-G | ** | ||||||
hg38:Y:11015328-C-A | ** | ||||||
hg38:Y:11020262-G-C | ** | ||||||
hg38:Y:11020267-C-A | ** | ||||||
hg38:Y:11020270-C-T | ** | ||||||
hg38:Y:11020275-A-T | ** | ||||||
hg38:Y:11020285-T-C | ** | ||||||
hg38:Y:11020297-C-G | ** | ||||||
hg38:Y:11027072-T-A | ** | ||||||
hg38:Y:11027111-A-T | ** | ||||||
hg38:Y:11030154-C-T | ** | ||||||
hg19:Y:13226683-C-A hg38:Y:11071007-C-A | ** | ||||||
hg19:Y:13318657-A-C hg38:Y:11162981-A-C | ** | ||||||
hg19:Y:13402657-C-A hg38:Y:11246981-C-A | ** | ||||||
hg19:Y:13454364-C-A hg38:Y:11298688-C-A | ** | ||||||
hg19:Y:13473791-A-AT hg38:Y:11318115-A-AT | ** | ||||||
hg19:Y:13480654-A-G hg38:Y:11324978-A-G | ** | ||||||
hg19:Y:13480659-C-G hg38:Y:11324983-C-G | ** | ||||||
hg19:Y:13480675-T-G hg38:Y:11324999-T-G | ** | ||||||
hg19:Y:13490667-C-A hg38:Y:11334991-C-A | ** | ||||||
hg19:Y:13507005-C-G hg38:Y:11351329-C-G | ** | ||||||
hg19:Y:13696303-G-T hg38:Y:11540627-G-T | DYZ17 | ** | |||||
hg19:Y:13696903-C-A hg38:Y:11541227-C-A | DYZ17 | ** | |||||
hg19:Y:13710133-G-T hg38:Y:11554457-G-T | DYZ17 | ** | |||||
hg19:Y:13710173-C-T hg38:Y:11554497-C-T | DYZ17 | ** | |||||
hg38:Y:11643662-T-G | DYZ17 | ** | |||||
hg38:Y:11650388-A-G | DYZ17 | ** | |||||
hg38:Y:11658754-A-C | DYZ17 | ** | |||||
hg38:Y:11658757-G-A | DYZ17 | ** | |||||
hg19:Y:13811009-G-T hg38:Y:11690303-G-T | DYZ17 | ** | |||||
hg19:Y:13928121-T-C hg38:Y:11807415-T-C | ** | ||||||
hg19:Y:14158143-G-A hg38:Y:12037437-G-A | ** | ||||||
hg19:Y:14272549-A-G hg38:Y:12151843-A-G | ** | ||||||
hg19:Y:14379181-A-G hg38:Y:12258477-A-G | ** | ||||||
hg19:Y:14493640-T-C hg38:Y:12381837-T-C | ** | ||||||
hg19:Y:14574636-T-A hg38:Y:12462836-T-A | ** | ||||||
hg19:Y:14680567-C-A hg38:Y:12568633-C-A | ** | ||||||
hg19:Y:14686187-A-T hg38:Y:12574253-A-T | ** | ||||||
hg19:Y:14686558-G-T hg38:Y:12574624-G-T | ** | ||||||
hg19:Y:14698480-A-C hg38:Y:12586546-A-C | ** | ||||||
hg19:Y:14933873-C-A hg38:Y:12821938-C-A | ** | ||||||
hg19:Y:14986227-G-T hg38:Y:12874295-G-T | ** | ||||||
hg19:Y:15056990-A-T hg38:Y:12945082-A-T | ** | ||||||
hg19:Y:15332228-C-A hg38:Y:13220346-C-A | ** | ||||||
hg19:Y:15392496-A-C hg38:Y:13280616-A-C | ** | ||||||
hg19:Y:15556776-A-C hg38:Y:13444896-A-C | ** | ||||||
hg19:Y:15623283-C-A hg38:Y:13511403-C-A | ** | ||||||
hg19:Y:15733909-A-C hg38:Y:13622029-A-C | ** | ||||||
hg19:Y:15753179-T-A hg38:Y:13641299-T-A | ** | ||||||
hg19:Y:15858316-C-A hg38:Y:13746436-C-A | ** | ||||||
hg19:Y:15976628-C-A hg38:Y:13864748-C-A | ** | ||||||
hg19:Y:16041395-G-A hg38:Y:13929515-G-A | ** | ||||||
hg19:Y:16186519-A-C hg38:Y:14074639-A-C | ** | ||||||
hg19:Y:16307650-C-A hg38:Y:14195770-C-A | FT180642 | ** | |||||
hg19:Y:16426750-G-A hg38:Y:14314870-G-A | ** | ||||||
hg19:Y:16490106-G-T hg38:Y:14378226-G-T | ** | ||||||
hg19:Y:16545455-G-T hg38:Y:14433575-G-T | ** | ||||||
hg19:Y:16662383-C-A hg38:Y:14550503-C-A | ** | ||||||
hg19:Y:16689741-C-A hg38:Y:14577861-C-A | ** | ||||||
hg19:Y:17046714-AGTT-A hg38:Y:14934834-AGTT-A | ** | ||||||
hg19:Y:17046781-C-A hg38:Y:14934901-C-A | ** | ||||||
hg19:Y:17114999-T-G hg38:Y:15003119-T-G | ** | ||||||
hg19:Y:17127355-C-A hg38:Y:15015475-C-A | ** | ||||||
hg19:Y:17319897-A-C hg38:Y:15208017-A-C | ** | ||||||
hg19:Y:17372355-T-G hg38:Y:15260475-T-G | ** | ||||||
hg19:Y:17561405-GA-G hg38:Y:15449525-GA-G | ** | ||||||
hg19:Y:17860690-C-A hg38:Y:15748810-C-A | FT65265 | ** | |||||
hg19:Y:17912888-A-C hg38:Y:15801008-A-C | ** | ||||||
hg19:Y:17952661-C-A hg38:Y:15840781-C-A | ** | ||||||
hg19:Y:18185030-G-T hg38:Y:16073150-G-T | ** | ||||||
hg19:Y:18201217-C-A hg38:Y:16089337-C-A | ** | ||||||
hg19:Y:18206752-T-G hg38:Y:16094872-T-G | ** | ||||||
hg19:Y:18370844-T-G hg38:Y:16258964-T-G | P6_Prx | ** | |||||
hg19:Y:18401179-A-C hg38:Y:16289299-A-C | P6_Gap | ** | |||||
hg19:Y:18492970-T-C hg38:Y:16381090-T-C | P6_Dst | ** | |||||
hg19:Y:18589701-T-G hg38:Y:16477821-T-G | ** | ||||||
hg19:Y:18661543-C-A hg38:Y:16549663-C-A | ** | ||||||
hg19:Y:18687407-A-T hg38:Y:16575527-A-T | ** | ||||||
hg19:Y:18708000-T-G hg38:Y:16596120-T-G | ** | ||||||
hg19:Y:18738168-G-A hg38:Y:16626288-G-A | ** | ||||||
hg19:Y:18838603-A-C hg38:Y:16726723-A-C | ** | ||||||
hg19:Y:18891080-T-A hg38:Y:16779200-T-A | ** | ||||||
hg19:Y:18906305-C-A hg38:Y:16794425-C-A | ** | ||||||
hg19:Y:19071467-A-T hg38:Y:16959587-A-T | ** | ||||||
hg19:Y:19107414-A-AC hg38:Y:16995534-A-AC | ** | ||||||
hg19:Y:19246088-C-A hg38:Y:17134208-C-A | FTA29005 | ** | |||||
hg19:Y:19294077-T-G hg38:Y:17182197-T-G | ** | ||||||
hg19:Y:19393392-G-A hg38:Y:17281512-G-A | ** | ||||||
hg19:Y:19431494-G-T hg38:Y:17319614-G-T | ** | ||||||
hg19:Y:19949588-T-TG hg38:Y:17837708-T-TG | P5_Prx | ** | |||||
hg19:Y:20511066-T-G hg38:Y:18349180-T-G | P5_Dst | ** | |||||
hg19:Y:21012282-T-A hg38:Y:18850396-T-A | P4_Dst | ** | |||||
hg19:Y:21012288-G-T hg38:Y:18850402-G-T | P4_Dst | ** | |||||
hg19:Y:21122669-G-A hg38:Y:18960783-G-A | ** | ||||||
hg19:Y:21135138-A-C hg38:Y:18973252-A-C | ** | ||||||
hg19:Y:21700439-T-G hg38:Y:19538553-T-G | ** | ||||||
hg19:Y:21793133-G-T hg38:Y:19631247-G-T | ** | ||||||
hg19:Y:21890952-A-C hg38:Y:19729066-A-C | ** | ||||||
hg19:Y:22027818-T-A hg38:Y:19865932-T-A | ** | ||||||
hg19:Y:22056510-G-T hg38:Y:19894624-G-T | ** | ||||||
hg19:Y:22085900-T-G hg38:Y:19924014-T-G | ** | ||||||
hg19:Y:22147822-T-G hg38:Y:19985936-T-G | ** | ||||||
hg19:Y:22147827-T-G hg38:Y:19985941-T-G | ** | ||||||
hg19:Y:22175897-A-C hg38:Y:20014011-A-C | ** | ||||||
hg19:Y:22435426-T-G hg38:Y:20273540-T-G | DYZ19 | ** | |||||
hg19:Y:22484014-G-T hg38:Y:20322128-G-T | DYZ19 | ** | |||||
hg19:Y:22489820-T-A hg38:Y:20327934-T-A | DYZ19 | ** | |||||
hg19:Y:22575160-A-G hg38:Y:20413274-A-G | ** | ||||||
hg19:Y:22579526-C-A hg38:Y:20417640-C-A | ** | ||||||
hg19:Y:22624974-T-G hg38:Y:20463088-T-G | ** | ||||||
hg19:Y:22689826-C-A hg38:Y:20527940-C-A | ** | ||||||
hg19:Y:23087131-T-G hg38:Y:20925245-T-G | ** | ||||||
hg19:Y:23452166-A-G hg38:Y:21290280-A-G | ** | ||||||
hg19:Y:23475581-A-G hg38:Y:21313695-A-G | ** | ||||||
hg19:Y:23792355-G-A hg38:Y:21630469-G-A | ** | ||||||
hg38:Y:21750320-C-A | ** | ||||||
hg19:Y:24258792-A-AT hg38:Y:22112645-A-AT | P3_b1 | ** | |||||
hg19:Y:24290873-A-C hg38:Y:22144726-A-C | P3_t1 | ** | |||||
hg19:Y:24335061-T-A hg38:Y:22188914-T-A | P3_t1 | ** | |||||
hg19:Y:24335072-G-T hg38:Y:22188925-G-T | P3_t1 | ** | |||||
hg19:Y:24335085-T-A hg38:Y:22188938-T-A | P3_t1 | ** | |||||
hg19:Y:24402455-G-A hg38:Y:22256308-G-A | ** | ||||||
hg19:Y:24577951-C-A hg38:Y:22431804-C-A | P3_t2 | ** | |||||
hg19:Y:24877553-G-T hg38:Y:22731406-G-T | g1 | ** | |||||
hg19:Y:25990594-A-T hg38:Y:23844447-A-T | P1_Y1 | ** | |||||
hg19:Y:26025283-G-T hg38:Y:23879136-G-T | P1_Y1 | ** | |||||
hg19:Y:27757709-A-C hg38:Y:25611562-A-C | P1_Y2 | ** | |||||
hg19:Y:28468806-G-T hg38:Y:26322659-G-T | ** | ||||||
hg19:Y:28591043-C-A hg38:Y:26444896-C-A | ** | ||||||
hg19:Y:28658323-A-C hg38:Y:26512176-A-C | ** | ||||||
hg19:Y:28695849-G-A hg38:Y:26549702-G-A | ** | ||||||
hg19:Y:28756956-C-T hg38:Y:26610809-C-T | ** | ||||||
hg38:Y:56771084-T-G | ** | ||||||
hg38:Y:56771108-G-C | ** | ||||||
hg38:Y:56771117-T-A | ** | ||||||
hg38:Y:56771127-T-G | ** | ||||||
hg38:Y:56840278-T-G | ** | ||||||
hg38:Y:56843074-T-G | ** | ||||||
hg38:Y:56845527-T-A | ** | ||||||
hg38:Y:56849613-G-T | ** | ||||||
hg38:Y:56859895-G-A | ** | ||||||
hg38:Y2:16613-T-G | ** | ||||||
hg19:Y:2892542-ATT-A,AT hg38:Y:3024501-ATT-A,AT | 18×T | *** | |||||
hg19:Y:18592167-CAA-C,CA hg38:Y:16480287-CAA-C,CA | 18×A | *** | |||||
hg38:Y:10801722-C-T | *** | ||||||
hg38:Y:11659541-C-A | DYZ17 | *** | |||||
hg38:Y:10799603-T-A | *** | ||||||
hg38:Y:10801685-T-TG | *** | ||||||
hg19:Y:21961558-C-A hg38:Y:19799672-C-A | *** | ||||||
hg19:Y:13832560-ATGGAA-A,ATGGAG hg38:Y:11711854-ATGGAA-A,ATGGAG | DYZ17 | *** | |||||
hg19:Y:17648009-CAAAAA-C,CAAAAAA hg38:Y:15536129-CAAAAA-C,CAAAAAA | 17×A | *** | |||||
hg19:Y:13449395-C-A hg38:Y:11293719-C-A | *** | ||||||
hg19:Y:4470160-C-A hg38:Y:4602119-C-A | *** | ||||||
hg19:Y:8117792-TCTC-T hg38:Y:8249751-TCTC-T | 5×CTC | *** | |||||
hg19:Y:13454707-C-A hg38:Y:11299031-C-A | *** | ||||||
hg38:Y:56841078-C-A | *** | ||||||
hg19:Y:8773858-CAAAA-C,CAAA hg38:Y:8905817-CAAAA-C,CAAA | 16×A | *** | |||||
hg19:Y:5073542-AATAT-A hg38:Y:5205501-AATAT-A | *** | ||||||
hg38:Y:10799650-C-T | FT431736 | *** | |||||
hg38:Y:56830624-C-A | *** | ||||||
hg19:Y:3717056-GT-G,GTT hg38:Y:3849015-GT-G,GTT | 11×T | *** | |||||
hg19:Y:2772653-C-A hg38:Y:2904612-C-A | *** | ||||||
hg19:Y:4961164-GA-G hg38:Y:5093123-GA-G | 9×A | *** | |||||
hg19:Y:5214229-A-G hg38:Y:5346188-A-G | *** | ||||||
hg19:Y:6434731-C-A hg38:Y:6566690-C-A | *** | ||||||
hg19:Y:7167533-C-A hg38:Y:7299492-C-A | *** | ||||||
hg19:Y:7868892-C-A hg38:Y:8000851-C-A | *** | ||||||
hg19:Y:9090973-C-A hg38:Y:9253364-C-A | *** | ||||||
hg19:Y:9171592-G-A hg38:Y:9333983-G-A | *** | ||||||
hg19:Y:9458122-C-A hg38:Y:9620513-C-A | *** | ||||||
hg19:Y:9828869-GA-G,GAA hg38:Y:9991260-GA-G,GAA | 13×A | *** | |||||
hg38:Y:10654292-C-A,G | *** | ||||||
hg38:Y:10761165-C-A,T | *** | ||||||
hg19:Y:13453450-A-T hg38:Y:11297774-A-T | *** | ||||||
hg19:Y:13457457-C-G hg38:Y:11301781-C-G | *** | ||||||
hg19:Y:13821558-C-A hg38:Y:11700852-C-A | DYZ17 | *** | |||||
hg19:Y:15156688-C-A hg38:Y:13044775-C-A | *** | ||||||
hg19:Y:15663076-G-T hg38:Y:13551196-G-T | *** | ||||||
hg19:Y:17367542-C-A hg38:Y:15255662-C-A | *** | ||||||
hg19:Y:18240079-TTCTC-T hg38:Y:16128199-TTCTC-T | 9×TC | *** | |||||
hg19:Y:19465536-G-T hg38:Y:17353656-G-T | *** | ||||||
hg19:Y:22029729-C-A hg38:Y:19867843-C-A | *** | ||||||
hg19:Y:22727227-G-A hg38:Y:20565341-G-A | *** | ||||||
hg19:Y:23042286-T-C hg38:Y:20880400-T-C | *** | ||||||
hg19:Y:23055428-C-A hg38:Y:20893542-C-A | *** | ||||||
hg19:Y:23431475-C-A hg38:Y:21269589-C-A | *** | ||||||
hg38:Y:56838006-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: B129471 | 9306579 | 7636129 | 7553616 |
Used in age calculations | 9306579 | 7636129 | 7553616 |
Counts of SNPs | 3 | 3 |
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