Nigassa
BigY2: B239237MDKA Birth:
AlgeriaTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 B239237 |
|---|---|---|---|---|---|---|---|
| hg19:Y:19963306-T-C hg38:Y:17851426-T-C | Y1411 Y1411_1 | P5_Prx | A* | ||||
| hg19:Y:13694986-C-G hg38:Y:11539310-C-G | DYZ17 | A* | |||||
| hg19:Y:13687898-A-G hg38:Y:11532222-A-G | DYZ17 | A* | |||||
| hg19:Y:28817678-G-T hg38:Y:26671531-G-T | A* | ||||||
| hg19:Y:13686992-G-T hg38:Y:11531316-G-T | DYZ17 | A* | |||||
| hg19:Y:22277667-G-T hg38:Y:20115781-G-T | DYZ19 | A* | |||||
| hg19:Y:13694972-A-T hg38:Y:11539296-A-T | DYZ17 | A* | |||||
| hg19:Y:6176608-C-T hg38:Y:6308567-C-T | IR3_Dst | A* | |||||
| hg19:Y:6340582-C-T hg38:Y:6472541-C-T | IR3_Dst | A* | |||||
| hg19:Y:19658571-A-T hg38:Y:17546691-A-T | P5_Prx | A* | |||||
| hg19:Y:19791129-C-A hg38:Y:17679249-C-A | P5_Prx | A* | |||||
| hg19:Y:19866118-T-G hg38:Y:17754238-T-G | P5_Prx | A* | |||||
| hg19:Y:19888427-G-A hg38:Y:17776547-G-A | P5_Prx | A* | |||||
| hg19:Y:20049811-G-T hg38:Y:17937931-G-T | P5_Prx | A* | |||||
| hg19:Y:20661902-T-A hg38:Y:18500016-T-A | P4_Prx | A* | |||||
| hg19:Y:20713502-G-A hg38:Y:18551616-G-A | P4_Prx | A* | |||||
| hg19:Y:22224450-G-C hg38:Y:20062564-G-C | DYZ19 | A* | |||||
| hg19:Y:22256012-T-C hg38:Y:20094126-T-C | DYZ19 | A* | |||||
| hg19:Y:25617386-G-A hg38:Y:23471239-G-A | P1_gr1 | A* | |||||
| hg19:Y:28817093-A-T hg38:Y:26670946-A-T | A* | ||||||
| hg19:Y:4261917-A-G hg38:Y:4393876-A-G | BY58074 | + | |||||
| hg19:Y:6106171-A-C hg38:Y:6238130-A-C | BY59098 | + | |||||
| hg19:Y:6190903-AC-A hg38:Y:6322862-AC-A | IR3_Dst | + | |||||
| hg19:Y:6668887-T-C hg38:Y:6800846-T-C | Y130933 | Y | Y | + | |||
| hg19:Y:7284967-G-A hg38:Y:7416926-G-A | Y130942 | Y | Y | + | |||
| hg19:Y:7703782-G-A hg38:Y:7835741-G-A | Y130940 | Y | Y | + | |||
| hg19:Y:8042356-C-A hg38:Y:8174315-C-A | Y63026 | Y | Y | + | |||
| hg19:Y:8164734-A-T hg38:Y:8296693-A-T | Y63208 | Y | Y | + | |||
| hg19:Y:8286153-C-G hg38:Y:8418112-C-G | BY71415 | Y | Y | + | |||
| hg19:Y:8381676-C-T hg38:Y:8513635-C-T | Y130939 | Y | Y | + | |||
| hg19:Y:8467596-G-C hg38:Y:8599555-G-C | Y130935 | Y | Y | + | |||
| hg19:Y:8560720-G-T hg38:Y:8692679-G-T | Y130930 | Y | Y | + | |||
| hg19:Y:8590729-C-T hg38:Y:8722688-C-T | BY74334 | Y | Y | + | |||
| hg19:Y:13808391-G-A hg38:Y:11687685-G-A | BY90168 | DYZ17 | + | ||||
| hg19:Y:13852637-C-T hg38:Y:11731931-C-T | Y130936 | DYZ17 | + | ||||
| hg19:Y:14064143-A-G hg38:Y:11943437-A-G | Y65870 | Y | Y | + | |||
| hg19:Y:14264863-G-A hg38:Y:12144157-G-A | BY94427 | Y | Y | + | |||
| hg19:Y:15993781-G-A hg38:Y:13881901-G-A | Y130938 | Y | Y | + | |||
| hg19:Y:16670118-C-A hg38:Y:14558238-C-A | Y70301 | Y | Y | + | |||
| hg19:Y:17020217-G-A hg38:Y:14908337-G-A | Y130941 | Y | Y | + | |||
| hg19:Y:17516173-T-G hg38:Y:15404293-T-G | BY115402 | Y | Y | + | |||
| hg19:Y:17820551-T-G hg38:Y:15708671-T-G | Y130934 | Y | Y | + | |||
| hg19:Y:17934839-G-C hg38:Y:15822959-G-C | Y72677 | Y | Y | + | |||
| hg19:Y:19172753-C-A hg38:Y:17060873-C-A | Y130937 | Y | + | ||||
| hg19:Y:19231190-C-A hg38:Y:17119310-C-A | Y130929 | Y | Y | + | |||
| hg19:Y:19279161-C-T hg38:Y:17167281-C-T | Y130931 | Y | Y | + | |||
| hg19:Y:21040339-T-G hg38:Y:18878453-T-G | Y75713 | Y | + | ||||
| hg19:Y:21142557-A-G hg38:Y:18980671-A-G | Y75871 | Y | Y | + | |||
| hg19:Y:21647015-AT-A hg38:Y:19485129-AT-A | + | ||||||
| hg19:Y:22288040-T-G hg38:Y:20126154-T-G | BY171777 | DYZ19 | + | ||||
| hg19:Y:22445494-C-T hg38:Y:20283608-C-T | BY219636 | DYZ19 | + | ||||
| hg19:Y:22460837-C-T hg38:Y:20298951-C-T | FT457755 | DYZ19 | + | ||||
| hg19:Y:22465599-A-G hg38:Y:20303713-A-G | FT458564 | DYZ19 | + | ||||
| hg19:Y:23271720-A-G hg38:Y:21109834-A-G | Y130932 | Y | Y | + | |||
| hg19:Y:23634392-G-A hg38:Y:21472506-G-A | BY146903 | Y | Y | + | |||
| hg19:Y:24366757-C-T hg38:Y:22220610-C-T | Y80574 | + | |||||
| hg19:Y:28804990-C-T hg38:Y:26658843-C-T | BY39607 | + | |||||
| hg19:Y:17817341-T-TTATCTATC hg38:Y:15705461-T-TTATCTATC | 11×TATC | * | |||||
| hg19:Y:15610680-G-GT hg38:Y:13498800-G-GT | 9×T | * | |||||
| hg19:Y:13457242-A-AATTCC hg38:Y:11301566-A-AATTCC | 5×ATTCC | * | |||||
| hg19:Y:17951460-TCTCTCT-T,TCA hg38:Y:15839580-TCTCTCT-T,TCA | * | ||||||
| hg19:Y:20105782-CT-C hg38:Y:17993902-CT-C | P5_Dst | * | |||||
| hg19:Y:22230321-A-T hg38:Y:20068435-A-T | DYZ19 | * | |||||
| hg19:Y:22280675-C-A hg38:Y:20118789-C-A | DYZ19 | * | |||||
| hg19:Y:22306847-G-A hg38:Y:20144961-G-A | DYZ19 | * | |||||
| hg19:Y:22340490-G-A hg38:Y:20178604-G-A | FGC38347 | DYZ19 | * | ||||
| hg19:Y:13708475-T-G hg38:Y:11552799-T-G | DYZ17 | ** | |||||
| hg19:Y:18454880-CCTTT-C hg38:Y:16343000-CCTTT-C | P6_Dst | 13×CTTT | ** | ||||
| hg19:Y:22421460-A-T hg38:Y:20259574-A-T | DYZ19 | ** | |||||
| hg19:Y:15971225-CTTTTTT-C hg38:Y:13859345-CTTTTTT-C | 18×T | ** | |||||
| hg19:Y:22421464-C-T hg38:Y:20259578-C-T | DYZ19 | ** | |||||
| hg19:Y:5313437-ACCT-A hg38:Y:5445396-ACCT-A | 5×CCT | ** | |||||
| hg19:Y:9639183-C-CTT hg38:Y:9801574-C-CTT | IR3_Prx | 12×T | ** | ||||
| hg19:Y:13809232-C-T hg38:Y:11688526-C-T | DYZ17 | ** | |||||
| hg19:Y:22421518-C-T hg38:Y:20259632-C-T | DYZ19 | ** | |||||
| hg38:Y:10803016-T-C | ** | ||||||
| hg38:Y:10676885-C-A | ** | ||||||
| hg38:Y:10764547-T-TCCTC | ** | ||||||
| hg38:Y:10764549-T-C | ** | ||||||
| hg38:Y:10849630-C-G | ** | ||||||
| hg38:Y:10889652-C-A | ** | ||||||
| hg38:Y:10689150-T-A | ** | ||||||
| hg19:Y:4502946-G-T hg38:Y:4634905-G-T | ** | ||||||
| hg38:Y:10868056-T-C | ** | ||||||
| hg38:Y:11001851-A-C | ** | ||||||
| hg19:Y:19547538-A-G hg38:Y:17435658-A-G | ** | ||||||
| hg38:Y:10866085-C-A | ** | ||||||
| hg19:Y:5976793-A-AGT hg38:Y:6108752-A-AGT | 8×GT | ** | |||||
| hg38:Y:10671592-CTACAA-C | ** | ||||||
| hg38:Y:10686598-C-T | ** | ||||||
| hg38:Y:10868004-C-A | ** | ||||||
| hg38:Y:11030269-TGG-T | ** | ||||||
| hg38:Y:10787981-C-A | ** | ||||||
| hg38:Y:10866089-T-C | ** | ||||||
| hg38:Y:11022048-C-A | ** | ||||||
| hg38:Y:10958833-T-C | ** | ||||||
| hg38:Y:10809632-TCCAC-T | ** | ||||||
| hg19:Y:13698533-G-C hg38:Y:11542857-G-C | DYZ17 | ** | |||||
| hg38:Y:10941178-T-C | ** | ||||||
| hg38:Y:10808504-G-C | ** | ||||||
| hg19:Y:9030289-G-T hg38:Y:9192680-G-T | ** | ||||||
| hg38:Y:11036179-C-G | ** | ||||||
| hg38:Y:11036192-C-CTGCAT | ** | ||||||
| hg38:Y:11036198-T-A | ** | ||||||
| hg38:Y:11036204-T-G | ** | ||||||
| hg38:Y:11036210-C-T | ** | ||||||
| hg38:Y:10689090-T-C | ** | ||||||
| hg38:Y:10689091-C-T | ** | ||||||
| hg38:Y:10801706-C-G | ** | ||||||
| hg38:Y:11012275-T-C | ** | ||||||
| hg38:Y:10631249-C-A | ** | ||||||
| hg38:Y:10631259-C-CA | ** | ||||||
| hg38:Y:10631260-CA-C | ** | ||||||
| hg38:Y:10631274-C-T | ** | ||||||
| hg38:Y:10631286-A-G | ** | ||||||
| hg38:Y:10969934-C-A | ** | ||||||
| hg38:Y:10795937-A-T | FT91736 | ** | |||||
| hg38:Y:10950529-G-T | ** | ||||||
| hg38:Y:11036132-C-CTCCAA | ** | ||||||
| hg38:Y:11036141-AT-A | ** | ||||||
| hg38:Y:11036152-C-A | ** | ||||||
| hg38:Y:10866047-C-T | ** | ||||||
| hg38:Y:10796113-A-G | ** | ||||||
| hg38:Y:10919182-T-A | ** | ||||||
| hg38:Y:10688072-T-A | ** | ||||||
| hg38:Y:10977057-C-A | ** | ||||||
| hg38:Y:10755296-T-A | ** | ||||||
| hg38:Y:11650649-A-G | DYZ17 | ** | |||||
| hg38:Y:10820811-T-C | ** | ||||||
| hg38:Y:10941144-T-A | ** | ||||||
| hg38:Y:10941148-C-G | ** | ||||||
| hg38:Y:10645915-A-C | ** | ||||||
| hg19:Y:5186736-A-C hg38:Y:5318695-A-C | ** | ||||||
| hg38:Y:10677823-T-G | ** | ||||||
| hg38:Y:10677823-TTTCA-T | ** | ||||||
| hg38:Y:10677832-G-A | ** | ||||||
| hg19:Y:19887301-TACAC-T hg38:Y:17775421-TACAC-T | P5_Prx | 12×AC | ** | ||||
| hg38:Y:10772683-ATGCAC-A | ** | ||||||
| hg38:Y:10772702-A-T | ** | ||||||
| hg38:Y:10772718-A-G | ** | ||||||
| hg19:Y:3725743-C-A hg38:Y:3857702-C-A | ** | ||||||
| hg19:Y:18890559-A-G hg38:Y:16778679-A-G | BY42339 | ** | |||||
| hg19:Y:22309920-C-G hg38:Y:20148034-C-G | DYZ19 | ** | |||||
| hg38:Y:10958815-C-G | ** | ||||||
| hg38:Y:10969272-A-ACTGTG | ** | ||||||
| hg19:Y:19187428-T-A hg38:Y:17075548-T-A | ** | ||||||
| hg38:Y:10933040-T-C | ** | ||||||
| hg38:Y:10933044-A-C | ** | ||||||
| hg38:Y:10922133-C-A | ** | ||||||
| hg38:Y:10922135-C-A | ** | ||||||
| hg38:Y:10963190-C-T | ** | ||||||
| hg38:Y:10766721-A-C | FGC80791 | ** | |||||
| hg38:Y:10866447-C-A | ** | ||||||
| hg38:Y:11030278-C-T | ** | ||||||
| hg19:Y:25929248-T-G hg38:Y:23783101-T-G | P1_Y1 | ** | |||||
| hg38:Y:10850590-C-T | ** | ||||||
| hg38:Y:10969951-T-G | ** | ||||||
| hg38:Y:10923626-C-T | ** | ||||||
| hg19:Y:22485137-A-G hg38:Y:20323251-A-G | DYZ19 | ** | |||||
| hg38:Y:10776212-C-T | ** | ||||||
| hg19:Y:20954373-G-T hg38:Y:18792487-G-T | P4_Dst | ** | |||||
| hg38:Y:56842369-A-C | ** | ||||||
| hg38:Y:10925716-T-C | ** | ||||||
| hg19:Y:15971536-T-G hg38:Y:13859656-T-G | ** | ||||||
| hg38:Y:10868963-C-A | ** | ||||||
| hg19:Y:28818384-T-A hg38:Y:26672237-T-A | ** | ||||||
| hg19:Y:28818399-G-T hg38:Y:26672252-G-T | ** | ||||||
| hg19:Y:28818413-A-G hg38:Y:26672266-A-G | ** | ||||||
| hg19:Y:7309839-T-G hg38:Y:7441798-T-G | ** | ||||||
| hg38:Y:10686693-TTGTAC-T | ** | ||||||
| hg19:Y:17196746-AGG-A hg38:Y:15084866-AGG-A | ** | ||||||
| hg38:Y:10795938-T-C | ** | ||||||
| hg19:Y:13305547-C-A hg38:Y:11149871-C-A | ** | ||||||
| hg38:Y:10969961-T-C | ** | ||||||
| hg38:Y:10669545-G-T | ** | ||||||
| hg38:Y:10866093-A-G | ** | ||||||
| hg38:Y:10895833-T-G | ** | ||||||
| hg38:Y:10867997-T-C | ** | ||||||
| hg38:Y:10682703-C-A | ** | ||||||
| hg38:Y:10809603-C-A | ** | ||||||
| hg38:Y:10809601-T-C | ** | ||||||
| hg38:Y:11673299-C-A | DYZ17 | ** | |||||
| hg38:Y:10949538-C-CAT | ** | ||||||
| hg38:Y:11004436-A-ACGTTTT | ** | ||||||
| hg38:Y:11004443-T-G | ** | ||||||
| hg38:Y:10978035-C-A | ** | ||||||
| hg19:Y:2915145-C-A hg38:Y:3047104-C-A | ** | ||||||
| hg19:Y:17569261-C-A hg38:Y:15457381-C-A | FGC73988 Y133931 | ** | |||||
| hg38:Y:10655421-T-A | ** | ||||||
| hg19:Y:9416923-C-A hg38:Y:9579314-C-A | ** | ||||||
| hg38:Y:56843272-A-T | ** | ||||||
| hg19:Y:27842120-G-A hg38:Y:25695973-G-A | P1_Y2 | ** | |||||
| hg38:Y:10846892-CCTTTT-C | ** | ||||||
| hg38:Y:10846904-A-G | ** | ||||||
| hg38:Y:10846910-C-A | ** | ||||||
| hg38:Y:10969956-T-C | ** | ||||||
| hg19:Y:7414276-TCAA-T hg38:Y:7546235-TCAA-T | ** | ||||||
| hg38:Y:11012309-A-AT | ** | ||||||
| hg38:Y:11012313-CA-C | ** | ||||||
| hg38:Y:11019184-C-A | ** | ||||||
| hg38:Y:10895030-C-A | ** | ||||||
| hg38:Y:11001090-T-G | ** | ||||||
| hg19:Y:7645202-ATTTTT-A hg38:Y:7777161-ATTTTT-A | 17×T | ** | |||||
| hg19:Y:13695554-C-T hg38:Y:11539878-C-T | DYZ17 | ** | |||||
| hg19:Y:17929762-G-T hg38:Y:15817882-G-T | ** | ||||||
| hg38:Y:11030275-A-ACT | ** | ||||||
| hg19:Y:3835083-C-A hg38:Y:3967042-C-A | FT364368 | ** | |||||
| hg19:Y:28481063-C-A hg38:Y:26334916-C-A | ** | ||||||
| hg38:Y:10958853-T-G | ** | ||||||
| hg19:Y:10032681-T-G hg38:Y:10195072-T-G | ** | ||||||
| hg38:Y:11671673-C-A | DYZ17 | ** | |||||
| hg19:Y:7160892-A-C hg38:Y:7292851-A-C | ** | ||||||
| hg38:Y:10846936-T-TG | ** | ||||||
| hg38:Y:10846939-AC-A | ** | ||||||
| hg38:Y:10866902-C-A | ** | ||||||
| hg19:Y:28818410-G-T hg38:Y:26672263-G-T | ** | ||||||
| hg38:Y:10866064-T-A | ** | ||||||
| hg19:Y:2758860-AAG-A hg38:Y:2890819-AAG-A | ** | ||||||
| hg38:Y:10918569-C-G | ** | ||||||
| hg38:Y:10867989-C-T | ** | ||||||
| hg38:Y:10867992-T-C | ** | ||||||
| hg38:Y:10868032-T-TG | ** | ||||||
| hg19:Y:15654973-G-T hg38:Y:13543093-G-T | ** | ||||||
| hg19:Y:28614059-C-A hg38:Y:26467912-C-A | ** | ||||||
| hg19:Y:13462324-G-T hg38:Y:11306648-G-T | ** | ||||||
| hg19:Y:13462325-C-T hg38:Y:11306649-C-T | ** | ||||||
| hg38:Y:10782363-G-C | ** | ||||||
| hg38:Y:10782368-T-C | ** | ||||||
| hg19:Y:22855368-G-T hg38:Y:20693482-G-T | ** | ||||||
| hg19:Y:28773871-C-A hg38:Y:26627724-C-A | ** | ||||||
| hg19:Y:16146467-T-TAA hg38:Y:14034587-T-TAA | P8_Dst | 10×A | ** | ||||
| hg19:Y:2758504-C-A hg38:Y:2890463-C-A | ** | ||||||
| hg38:Y:10809577-T-A | ** | ||||||
| hg38:Y:10809589-C-T | ** | ||||||
| hg38:Y:10809593-C-G | ** | ||||||
| hg38:Y:56843864-C-A | ** | ||||||
| hg19:Y:13275213-C-A hg38:Y:11119537-C-A | ** | ||||||
| hg19:Y:13902969-C-A hg38:Y:11782263-C-A | ** | ||||||
| hg38:Y:10671508-C-T | ** | ||||||
| hg38:Y:10755308-A-T | ** | ||||||
| hg19:Y:5674680-C-A hg38:Y:5806639-C-A | ** | ||||||
| hg38:Y:10826528-TTCC-T | ** | ||||||
| hg38:Y:10764596-A-ATACCG | ** | ||||||
| hg38:Y:11003518-C-A | ** | ||||||
| hg19:Y:19272165-T-A hg38:Y:17160285-T-A | ** | ||||||
| hg19:Y:3343839-C-A hg38:Y:3475798-C-A | ** | ||||||
| hg19:Y:2750822-A-C hg38:Y:2882781-A-C | FT178581 | ** | |||||
| hg19:Y:3091875-T-G hg38:Y:3223834-T-G | ** | ||||||
| hg19:Y:3156615-T-A hg38:Y:3288574-T-A | ** | ||||||
| hg19:Y:3156632-G-T hg38:Y:3288591-G-T | ** | ||||||
| hg19:Y:3250731-G-C hg38:Y:3382690-G-C | Y10834 | ** | |||||
| hg19:Y:3283417-G-T hg38:Y:3415376-G-T | ** | ||||||
| hg19:Y:3520767-C-A hg38:Y:3652726-C-A | ** | ||||||
| hg19:Y:3630078-CT-C hg38:Y:3762037-CT-C | 9×T | ** | |||||
| hg19:Y:3769442-CTTTT-C hg38:Y:3901401-CTTTT-C | 13×T | ** | |||||
| hg19:Y:3865321-A-C hg38:Y:3997280-A-C | ** | ||||||
| hg19:Y:4064450-T-G hg38:Y:4196409-T-G | ** | ||||||
| hg19:Y:4271822-C-A hg38:Y:4403781-C-A | ** | ||||||
| hg19:Y:4393002-T-G hg38:Y:4524961-T-G | ** | ||||||
| hg19:Y:4393028-T-G hg38:Y:4524987-T-G | ** | ||||||
| hg19:Y:4435313-C-A hg38:Y:4567272-C-A | ** | ||||||
| hg19:Y:4462376-C-A hg38:Y:4594335-C-A | ** | ||||||
| hg19:Y:4472253-A-C hg38:Y:4604212-A-C | ** | ||||||
| hg19:Y:4627027-C-A hg38:Y:4758986-C-A | ** | ||||||
| hg19:Y:4803987-A-T hg38:Y:4935946-A-T | ** | ||||||
| hg19:Y:4971573-C-A hg38:Y:5103532-C-A | ** | ||||||
| hg19:Y:5125869-C-A hg38:Y:5257828-C-A | ** | ||||||
| hg19:Y:5187153-A-C hg38:Y:5319112-A-C | ** | ||||||
| hg19:Y:5449974-G-T hg38:Y:5581933-G-T | ** | ||||||
| hg19:Y:5524850-G-A hg38:Y:5656809-G-A | FGC64849 | ** | |||||
| hg19:Y:5842073-C-A hg38:Y:5974032-C-A | ** | ||||||
| hg19:Y:6177374-C-A hg38:Y:6309333-C-A | IR3_Dst | ** | |||||
| hg19:Y:6302490-TC-T hg38:Y:6434449-TC-T | IR3_Dst | ** | |||||
| hg19:Y:6302496-C-A hg38:Y:6434455-C-A | IR3_Dst | ** | |||||
| hg19:Y:6302499-C-A hg38:Y:6434458-C-A | IR3_Dst | ** | |||||
| hg19:Y:6302500-C-A hg38:Y:6434459-C-A | IR3_Dst | ** | |||||
| hg19:Y:6310856-C-CAA hg38:Y:6442815-C-CAA | IR3_Dst | ** | |||||
| hg19:Y:6729638-G-T hg38:Y:6861597-G-T | ** | ||||||
| hg19:Y:7041437-C-CA hg38:Y:7173396-C-CA | ** | ||||||
| hg19:Y:7105167-GAAA-G hg38:Y:7237126-GAAA-G | 11×A | ** | |||||
| hg19:Y:7158118-G-A hg38:Y:7290077-G-A | ** | ||||||
| hg19:Y:7311579-C-A hg38:Y:7443538-C-A | ** | ||||||
| hg19:Y:7418562-C-A hg38:Y:7550521-C-A | ** | ||||||
| hg19:Y:7755194-C-A hg38:Y:7887153-C-A | ** | ||||||
| hg19:Y:7873898-T-G hg38:Y:8005857-T-G | ** | ||||||
| hg19:Y:7873901-T-TG hg38:Y:8005860-T-TG | ** | ||||||
| hg19:Y:8855690-C-A hg38:Y:8987649-C-A | ** | ||||||
| hg38:Y:9112863-G-T | ** | ||||||
| hg19:Y:9077009-T-C hg38:Y:9239400-T-C | ** | ||||||
| hg19:Y:9320434-G-T hg38:Y:9482825-G-T | ** | ||||||
| hg19:Y:9444594-C-A hg38:Y:9606985-C-A | ** | ||||||
| hg19:Y:9978558-G-T hg38:Y:10140949-G-T | ** | ||||||
| hg38:Y:10628581-T-G | ** | ||||||
| hg38:Y:10628583-A-C | ** | ||||||
| hg38:Y:10655437-T-G | ** | ||||||
| hg38:Y:10656830-A-AT | ** | ||||||
| hg38:Y:10656834-T-A | ** | ||||||
| hg38:Y:10656839-A-T | ** | ||||||
| hg38:Y:10661171-C-A | ** | ||||||
| hg38:Y:10666779-A-C | ** | ||||||
| hg38:Y:10666781-T-G | ** | ||||||
| hg38:Y:10669064-C-T | ** | ||||||
| hg38:Y:10669066-CT-C | ** | ||||||
| hg38:Y:10671522-C-T | ** | ||||||
| hg38:Y:10672314-C-A | ** | ||||||
| hg38:Y:10673072-A-C | ** | ||||||
| hg38:Y:10750844-C-A | ** | ||||||
| hg38:Y:10753533-CCA-C | ** | ||||||
| hg38:Y:10753538-CCAA-C | ** | ||||||
| hg38:Y:10753578-C-T | ** | ||||||
| hg38:Y:10754967-C-G | ** | ||||||
| hg38:Y:10760405-C-CATTAA | ** | ||||||
| hg38:Y:10764216-C-A | ** | ||||||
| hg38:Y:10767651-T-A | ** | ||||||
| hg38:Y:10768676-T-A | ** | ||||||
| hg38:Y:10768681-T-A | ** | ||||||
| hg38:Y:10772648-T-G | ** | ||||||
| hg38:Y:10773391-C-CA | ** | ||||||
| hg38:Y:10773559-C-T | ** | ||||||
| hg38:Y:10775649-T-A | ** | ||||||
| hg38:Y:10778763-C-A | ** | ||||||
| hg38:Y:10780468-C-A | ** | ||||||
| hg38:Y:10780818-T-C | ** | ||||||
| hg38:Y:10782342-G-C | ** | ||||||
| hg38:Y:10782347-T-C | ** | ||||||
| hg38:Y:10784139-G-T | FTB68809 | ** | |||||
| hg38:Y:10786772-C-A | ** | ||||||
| hg38:Y:10793159-C-G | ** | ||||||
| hg38:Y:10803020-T-G | ** | ||||||
| hg38:Y:10803023-C-T | ** | ||||||
| hg38:Y:10803033-C-T | ** | ||||||
| hg38:Y:10803043-T-C | ** | ||||||
| hg38:Y:10803358-A-C | ** | ||||||
| hg38:Y:10810670-C-CCACTG | ** | ||||||
| hg38:Y:10810992-A-T | ** | ||||||
| hg38:Y:10818314-C-A | ** | ||||||
| hg38:Y:10818713-T-C | ** | ||||||
| hg38:Y:10820762-T-A | ** | ||||||
| hg38:Y:10820789-C-A | ** | ||||||
| hg38:Y:10822648-T-G | ** | ||||||
| hg38:Y:10832062-A-C | ** | ||||||
| hg38:Y:10846306-C-A | ** | ||||||
| hg38:Y:10851973-C-A | ** | ||||||
| hg38:Y:10859337-C-T | ** | ||||||
| hg38:Y:10860720-A-C | ** | ||||||
| hg38:Y:10861880-C-T | FT434468 | ** | |||||
| hg38:Y:10862361-A-G | ** | ||||||
| hg38:Y:10864971-C-A | FGC81278 | ** | |||||
| hg38:Y:10866079-T-A | ** | ||||||
| hg38:Y:10868058-C-G | ** | ||||||
| hg38:Y:10872257-T-G | ** | ||||||
| hg38:Y:10872304-T-A | ** | ||||||
| hg38:Y:10883057-C-A | ** | ||||||
| hg38:Y:10894690-T-A | ** | ||||||
| hg38:Y:10910320-G-C | ** | ||||||
| hg38:Y:10918551-A-T | ** | ||||||
| hg38:Y:10919189-T-C | ** | ||||||
| hg38:Y:10921132-A-G | ** | ||||||
| hg38:Y:10921162-A-AGTCAG | ** | ||||||
| hg38:Y:10927453-A-C | ** | ||||||
| hg38:Y:10936644-C-T | ** | ||||||
| hg38:Y:10936648-A-T | ** | ||||||
| hg38:Y:10948648-A-T | ** | ||||||
| hg38:Y:10949813-C-A | ** | ||||||
| hg38:Y:10949838-C-A | ** | ||||||
| hg38:Y:10950017-C-A | ** | ||||||
| hg38:Y:10950925-C-A | ** | ||||||
| hg38:Y:10958837-A-C | ** | ||||||
| hg38:Y:10958860-C-A | ** | ||||||
| hg38:Y:10965460-A-T | ** | ||||||
| hg38:Y:10983631-A-C | ** | ||||||
| hg38:Y:10985793-T-C | ** | ||||||
| hg38:Y:10989071-CCACTG-C | ** | ||||||
| hg38:Y:10989729-A-C | FGC81280 | ** | |||||
| hg38:Y:10991475-C-A | ** | ||||||
| hg38:Y:10993613-C-A | ** | ||||||
| hg38:Y:10996997-T-A | ** | ||||||
| hg38:Y:10997007-T-A | ** | ||||||
| hg38:Y:10997122-T-A | ** | ||||||
| hg38:Y:10997368-G-T | ** | ||||||
| hg38:Y:10999363-C-A | ** | ||||||
| hg38:Y:11001789-T-A | ** | ||||||
| hg38:Y:11003694-A-C | ** | ||||||
| hg38:Y:11004435-C-CTGTT | ** | ||||||
| hg38:Y:11006625-G-GCATTC | ** | ||||||
| hg38:Y:11009930-C-G | ** | ||||||
| hg38:Y:11019939-T-C | ** | ||||||
| hg38:Y:11022103-T-A | ** | ||||||
| hg38:Y:11024317-A-T | ** | ||||||
| hg38:Y:11032497-A-T | ** | ||||||
| hg38:Y:11032502-A-T | ** | ||||||
| hg38:Y:11037962-C-G | ** | ||||||
| hg38:Y:11037962-C-CCACTT | ** | ||||||
| hg38:Y:11037975-C-T | ** | ||||||
| hg19:Y:13223474-G-A hg38:Y:11067798-G-A | ** | ||||||
| hg19:Y:13301116-C-A hg38:Y:11145440-C-A | ** | ||||||
| hg19:Y:13461127-A-AT hg38:Y:11305451-A-AT | ** | ||||||
| hg19:Y:13552876-C-T hg38:Y:11397200-C-T | ** | ||||||
| hg19:Y:13571573-G-T hg38:Y:11415897-G-T | ** | ||||||
| hg19:Y:13586167-T-G hg38:Y:11430491-T-G | ** | ||||||
| hg19:Y:13600877-A-C hg38:Y:11445201-A-C | ** | ||||||
| hg19:Y:13690244-C-T hg38:Y:11534568-C-T | DYZ17 | ** | |||||
| hg19:Y:13690818-G-T hg38:Y:11535142-G-T | DYZ17 | ** | |||||
| hg19:Y:13695559-TG-T hg38:Y:11539883-TG-T | DYZ17 | ** | |||||
| hg19:Y:13695563-A-AG hg38:Y:11539887-A-AG | DYZ17 | ** | |||||
| hg19:Y:13697182-C-A hg38:Y:11541506-C-A | DYZ17 | ** | |||||
| hg19:Y:13697188-G-A hg38:Y:11541512-G-A | DYZ17 | ** | |||||
| hg19:Y:13698483-G-C hg38:Y:11542807-G-C | DYZ17 | ** | |||||
| hg19:Y:13705525-C-CTTCCG hg38:Y:11549849-C-CTTCCG | DYZ17 | ** | |||||
| hg19:Y:13708472-A-C hg38:Y:11552796-A-C | DYZ17 | ** | |||||
| hg38:Y:11646242-G-GAATT | DYZ17 | ** | |||||
| hg38:Y:11673359-A-C | DYZ17 | ** | |||||
| hg19:Y:13859417-A-C hg38:Y:11738711-A-C | DYZ17 | ** | |||||
| hg19:Y:13960659-G-A hg38:Y:11839953-G-A | FT451882 | ** | |||||
| hg19:Y:14100165-C-A hg38:Y:11979459-C-A | ** | ||||||
| hg19:Y:14184449-G-A hg38:Y:12063743-G-A | ** | ||||||
| hg19:Y:14213636-GAGGAAGGA-G hg38:Y:12092930-GAGGAAGGA-G | 7×AGGA | ** | |||||
| hg19:Y:14421832-T-C hg38:Y:12301107-T-C | ** | ||||||
| hg19:Y:14432127-A-C hg38:Y:12311400-A-C | ** | ||||||
| hg19:Y:14450398-A-C hg38:Y:12329671-A-C | ** | ||||||
| hg19:Y:14673116-T-G hg38:Y:12561182-T-G | ** | ||||||
| hg19:Y:15179415-G-C hg38:Y:13067501-G-C | ** | ||||||
| hg19:Y:15556842-C-A hg38:Y:13444962-C-A | ** | ||||||
| hg19:Y:15776854-T-G hg38:Y:13664974-T-G | ** | ||||||
| hg19:Y:15918874-T-G hg38:Y:13806994-T-G | ** | ||||||
| hg19:Y:16274147-C-A hg38:Y:14162267-C-A | ** | ||||||
| hg19:Y:16533365-CATAT-C hg38:Y:14421485-CATAT-C | ** | ||||||
| hg19:Y:16931243-G-T hg38:Y:14819363-G-T | ** | ||||||
| hg19:Y:17196743-G-A hg38:Y:15084863-G-A | ** | ||||||
| hg19:Y:17249638-C-A hg38:Y:15137758-C-A | ** | ||||||
| hg19:Y:17324322-AG-A hg38:Y:15212442-AG-A | ** | ||||||
| hg19:Y:17527418-A-T hg38:Y:15415538-A-T | ** | ||||||
| hg19:Y:17635097-C-A hg38:Y:15523217-C-A | ** | ||||||
| hg19:Y:17876409-C-A hg38:Y:15764529-C-A | ** | ||||||
| hg19:Y:18086536-C-A hg38:Y:15974656-C-A | ** | ||||||
| hg19:Y:18086574-C-A hg38:Y:15974694-C-A | ** | ||||||
| hg19:Y:18086672-G-T hg38:Y:15974792-G-T | ** | ||||||
| hg19:Y:18211514-G-A hg38:Y:16099634-G-A | ** | ||||||
| hg19:Y:18544946-ACTTAAGATAT-A hg38:Y:16433066-ACTTAAGATAT-A | ** | ||||||
| hg19:Y:18596061-AACACACAC-A hg38:Y:16484181-AACACACAC-A | 16×AC | ** | |||||
| hg19:Y:18682725-TG-T hg38:Y:16570845-TG-T | ** | ||||||
| hg19:Y:18682736-G-C hg38:Y:16570856-G-C | ** | ||||||
| hg19:Y:18682738-C-G hg38:Y:16570858-C-G | ** | ||||||
| hg19:Y:18682745-A-G hg38:Y:16570865-A-G | ** | ||||||
| hg19:Y:18682756-G-T hg38:Y:16570876-G-T | ** | ||||||
| hg19:Y:18682758-A-T hg38:Y:16570878-A-T | ** | ||||||
| hg19:Y:18682759-A-G hg38:Y:16570879-A-G | ** | ||||||
| hg19:Y:18682766-T-C hg38:Y:16570886-T-C | ** | ||||||
| hg19:Y:18959156-A-T hg38:Y:16847276-A-T | ** | ||||||
| hg19:Y:19015546-C-A hg38:Y:16903666-C-A | ** | ||||||
| hg19:Y:19071108-A-G hg38:Y:16959228-A-G | FT193839 | ** | |||||
| hg19:Y:19088115-C-A hg38:Y:16976235-C-A | ** | ||||||
| hg19:Y:19547553-T-C hg38:Y:17435673-T-C | ** | ||||||
| hg19:Y:19658570-A-AT hg38:Y:17546690-A-AT | P5_Prx | ** | |||||
| hg19:Y:19924690-T-G hg38:Y:17812810-T-G | P5_Prx | ** | |||||
| hg19:Y:19949292-T-G hg38:Y:17837412-T-G | P5_Prx | ** | |||||
| hg19:Y:19963746-T-C hg38:Y:17851866-T-C | P5_Prx | ** | |||||
| hg19:Y:20364617-C-A hg38:Y:18202731-C-A | P5_Dst | ** | |||||
| hg19:Y:20393706-T-A hg38:Y:18231820-T-A | P5_Dst | ** | |||||
| hg19:Y:20579346-ACAC-A hg38:Y:18417460-ACAC-A | P5_Dst | ** | |||||
| hg19:Y:20649931-T-G hg38:Y:18488045-T-G | P4_Prx | ** | |||||
| hg19:Y:20649936-A-T hg38:Y:18488050-A-T | P4_Prx | ** | |||||
| hg19:Y:20649941-C-G hg38:Y:18488055-C-G | P4_Prx | ** | |||||
| hg19:Y:20649962-C-A hg38:Y:18488076-C-A | P4_Prx | ** | |||||
| hg19:Y:20840355-C-A hg38:Y:18678469-C-A | P4_Gap | ** | |||||
| hg19:Y:20872238-T-TA hg38:Y:18710352-T-TA | P4_Dst | ** | |||||
| hg19:Y:21054495-T-C hg38:Y:18892609-T-C | ** | ||||||
| hg19:Y:21141159-C-A hg38:Y:18979273-C-A | ** | ||||||
| hg19:Y:21248049-T-G hg38:Y:19086163-T-G | ** | ||||||
| hg19:Y:21334795-T-A hg38:Y:19172909-T-A | ** | ||||||
| hg19:Y:21459287-G-T hg38:Y:19297401-G-T | ** | ||||||
| hg19:Y:21534855-G-T hg38:Y:19372969-G-T | Y76705 | ** | |||||
| hg19:Y:21846893-A-T hg38:Y:19685007-A-T | ** | ||||||
| hg19:Y:21939725-A-C hg38:Y:19777839-A-C | ** | ||||||
| hg19:Y:22218848-G-T hg38:Y:20056962-G-T | DYZ19 | ** | |||||
| hg19:Y:22252160-A-G hg38:Y:20090274-A-G | DYZ19 | ** | |||||
| hg19:Y:22307153-T-G hg38:Y:20145267-T-G | DYZ19 | ** | |||||
| hg19:Y:22421482-G-T hg38:Y:20259596-G-T | DYZ19 | ** | |||||
| hg19:Y:22421500-A-G hg38:Y:20259614-A-G | DYZ19 | ** | |||||
| hg19:Y:22508169-C-A hg38:Y:20346283-C-A | DYZ19 | ** | |||||
| hg19:Y:22528292-T-C hg38:Y:20366406-T-C | ** | ||||||
| hg19:Y:22564805-A-C hg38:Y:20402919-A-C | ** | ||||||
| hg19:Y:22759889-A-G hg38:Y:20598003-A-G | ** | ||||||
| hg19:Y:23096725-T-G hg38:Y:20934839-T-G | ** | ||||||
| hg19:Y:25719242-T-A hg38:Y:23573095-T-A | P1_b3 | ** | |||||
| hg19:Y:25966278-T-A hg38:Y:23820131-T-A | P1_Y1 | ** | |||||
| hg19:Y:25998527-T-A hg38:Y:23852380-T-A | P1_Y1 | ** | |||||
| hg19:Y:26063987-A-AC hg38:Y:23917840-A-AC | P1_Y1 | ** | |||||
| hg19:Y:26152063-C-A hg38:Y:24005916-C-A | P1_Y1 | ** | |||||
| hg19:Y:26308499-C-A hg38:Y:24162352-C-A | P1_Y1 | ** | |||||
| hg19:Y:27861645-C-A hg38:Y:25715498-C-A | P1_Y2 | ** | |||||
| hg19:Y:27917408-C-A hg38:Y:25771261-C-A | P1_Y2 | ** | |||||
| hg19:Y:28070146-TACACAC-T hg38:Y:25923999-TACACAC-T | P1_Y2 | 11×AC | ** | ||||
| hg19:Y:28229185-G-T hg38:Y:26083038-G-T | P1_b4 | ** | |||||
| hg19:Y:28530874-A-C hg38:Y:26384727-A-C | ** | ||||||
| hg19:Y:28612248-C-A hg38:Y:26466101-C-A | ** | ||||||
| hg19:Y:28631619-C-A hg38:Y:26485472-C-A | ** | ||||||
| hg19:Y:28689184-C-A hg38:Y:26543037-C-A | ** | ||||||
| hg19:Y:28700874-G-GA hg38:Y:26554727-G-GA | ** | ||||||
| hg19:Y:28798100-C-A hg38:Y:26651953-C-A | ** | ||||||
| hg38:Y:56724025-T-A | ** | ||||||
| hg38:Y:56724073-A-T | ** | ||||||
| hg38:Y:56724110-A-G | ** | ||||||
| hg38:Y:56724120-G-A | ** | ||||||
| hg38:Y:56724128-T-A | ** | ||||||
| hg38:Y:56843579-A-T | ** | ||||||
| hg38:Y:56843636-G-A | ** | ||||||
| hg38:Y:56843836-A-T | ** | ||||||
| hg38:Y:56843880-T-C | ** | ||||||
| hg38:Y:56848886-C-A | ** | ||||||
| hg38:Y:56866569-CA-C | ** | ||||||
| hg19:Y:19007643-C-T hg38:Y:16895763-C-T | *** | ||||||
| hg19:Y:13809229-A-G hg38:Y:11688523-A-G | DYZ17 | *** | |||||
| hg19:Y:58985189-C-T hg38:Y:56839042-C-T | *** | ||||||
| hg38:Y:11019220-A-T | *** | ||||||
| hg19:Y:18185053-C-A hg38:Y:16073173-C-A | *** | ||||||
| hg19:Y:13485597-T-A hg38:Y:11329921-T-A | *** | ||||||
| hg38:Y:10932774-C-T | *** | ||||||
| hg38:Y:10686596-C-A | *** | ||||||
| hg38:Y:10785288-C-CAGGTTA | *** | ||||||
| hg19:Y:15917633-A-AT hg38:Y:13805753-A-AT | 9×T | *** | |||||
| hg38:Y:10667030-A-G | *** | ||||||
| hg38:Y:56842393-T-C | *** | ||||||
| hg38:Y:56842405-C-T | *** | ||||||
| hg38:Y:11643798-A-G,T | DYZ17 | *** | |||||
| hg19:Y:23327296-CTT-C,CT hg38:Y:21165410-CTT-C,CT | 11×T | *** | |||||
| hg38:Y:10775833-A-C | *** | ||||||
| hg38:Y:56843287-C-A | *** | ||||||
| hg38:Y:56843288-T-C | *** | ||||||
| hg38:Y:56843317-T-C | *** | ||||||
| hg38:Y:56843323-G-A | *** | ||||||
| hg38:Y:56843351-A-C | *** | ||||||
| hg38:Y:56843352-G-A | *** | ||||||
| hg19:Y:13256043-C-T hg38:Y:11100367-C-T | *** | ||||||
| hg38:Y:10663416-ACTCCACTCCACCTCA-A,ACTCCACTCCACTCCT | *** | ||||||
| hg38:Y:56835558-T-C | *** | ||||||
| hg38:Y:10667033-C-G | *** | ||||||
| hg38:Y:10997100-C-G | *** | ||||||
| hg19:Y:3831382-C-A hg38:Y:3963341-C-A | *** | ||||||
| hg19:Y:2721875-GATT-G,GT hg38:Y:2853834-GATT-G,GT | *** | ||||||
| hg19:Y:5761440-G-A hg38:Y:5893399-G-A | *** | ||||||
| hg19:Y:7862174-C-A hg38:Y:7994133-C-A | *** | ||||||
| hg38:Y:10932737-T-C,G | *** | ||||||
| hg38:Y:10932781-A-G,T | *** | ||||||
| hg38:Y:10997118-T-A | *** | ||||||
| hg19:Y:14848913-CTT-C,CT hg38:Y:12736979-CTT-C,CT | 14×T | *** | |||||
| hg19:Y:16704956-C-T hg38:Y:14593076-C-T | FT282459 | *** | |||||
| hg19:Y:18738824-T-C hg38:Y:16626944-T-C | *** | ||||||
| hg19:Y:21394747-G-A hg38:Y:19232861-G-A | *** | ||||||
| hg19:Y:21455921-G-A hg38:Y:19294035-G-A | *** | ||||||
| hg19:Y:22934227-A-T hg38:Y:20772341-A-T | *** | ||||||
| hg38:Y:56840704-T-C | *** | ||||||
| hg38:Y:56840983-A-G | *** | ||||||
| hg38:Y:56840985-T-A | *** | ||||||
| hg38:Y2:36593-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: B239237 | 10052903 | 8163479 | 8011452 |
| Used in age calculations | 10052903 | 8163479 | 8011452 |
| Counts of SNPs | 25 | 23 |
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