Dowlearn
BigY2: 291311MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 291311 |
---|---|---|---|---|---|---|---|---|
13687025-C-A | 11531349-C-A | A* | ||||||
13687082-G-A | 11531406-G-A | A* | ||||||
16855499-G-A | 14743619-G-A | BY110611 | Y | Y | + | |||
18670590-C-T | 16558710-C-T | BY122999 | Y | Y | + | |||
23736000-C-A | 21574114-C-A | BY157171 | + | |||||
15507539-AACAC-A | 13395659-AACAC-A | 16×AC | * | |||||
17994811-G-A | 15882931-G-A | P7_Prx | ** | |||||
4207957-C-CAA | 4339916-C-CAA | 22×A | ** | |||||
6918327-T-A | 7050286-T-A | ** | ||||||
13696846-A-T | 11541170-A-T | ** | ||||||
17346283-C-A | 15234403-C-A | FT291053 | ** | |||||
21714723-T-G | 19552837-T-G | ** | ||||||
15424313-G-GAA | 13312433-G-GAA | 14×A | ** | |||||
28797840-T-A | 26651693-T-A | ** | ||||||
22260713-C-T | 20098827-C-T | DYZ19 | ** | |||||
4862861-C-A | 4994820-C-A | ** | ||||||
19600631-T-C | 17488751-T-C | P5_Prx | ** | |||||
22505434-T-G | 20343548-T-G | DYZ19 | ** | |||||
18398174-TAC-T | 16286294-TAC-T | P6_Gap | 9×AC | ** | ||||
10824179-T-C | ** | |||||||
10666452-G-C | ** | |||||||
10666462-G-C | ** | |||||||
10666467-C-T | ** | |||||||
10666482-G-C | ** | |||||||
10666488-C-T | ** | |||||||
10666493-T-C | ** | |||||||
10666503-C-A | ** | |||||||
10666507-T-G | ** | |||||||
10666514-C-A | ** | |||||||
10666515-T-A | ** | |||||||
10932942-C-T | ** | |||||||
9416815-C-A | 9579206-C-A | ** | ||||||
15475061-T-C | 13363181-T-C | ** | ||||||
23123193-C-A | 20961307-C-A | ** | ||||||
7190680-C-A | 7322639-C-A | ** | ||||||
14387794-C-A | 12267090-C-A | FT273992 | ** | |||||
22787157-C-A | 20625271-C-A | ** | ||||||
10669400-ATTCAT-A | ** | |||||||
10937702-T-A | ** | |||||||
10745819-G-T | ** | |||||||
4873833-C-A | 5005792-C-A | ** | ||||||
10793081-G-A | ** | |||||||
10793085-C-A | ** | |||||||
10850727-CTCCAT-C | ** | |||||||
7897456-G-T | 8029415-G-T | ** | ||||||
10793077-T-C | ** | |||||||
10951773-C-T | ** | |||||||
10804461-C-T | ** | |||||||
9231746-T-A | 9394137-T-A | ** | ||||||
10678633-C-CATTGTACTCT | ** | |||||||
10942891-C-A | ** | |||||||
24751255-C-A | 22605108-C-A | P3_b2 | ** | |||||
10814178-C-A | FT172148 | ** | ||||||
10746482-C-A | ** | |||||||
10932914-C-T | ** | |||||||
17056794-A-C | 14944914-A-C | ** | ||||||
11032059-A-T | ** | |||||||
11009237-T-A | ** | |||||||
7295898-C-A | 7427857-C-A | ** | ||||||
9079464-G-T | 9241855-G-T | ** | ||||||
9799132-G-T | 9961523-G-T | ** | ||||||
28803996-T-A | 26657849-T-A | ** | ||||||
19600575-A-T | 17488695-A-T | P5_Prx | ** | |||||
19600590-A-T | 17488710-A-T | P5_Prx | ** | |||||
18343599-CTG-C | 16231719-CTG-C | P6_Prx | ** | |||||
10950908-T-C | ** | |||||||
10796686-C-G | ** | |||||||
22300701-G-C | 20138815-G-C | DYZ19 | ** | |||||
10750809-C-A | ** | |||||||
6967-A-T | ** | |||||||
7097941-C-A | 7229900-C-A | ** | ||||||
24293027-T-G | 22146880-T-G | P3_t1 | ** | |||||
13907747-C-A | 11787041-C-A | ** | ||||||
10783234-C-A | ** | |||||||
26355459-C-A | 24209312-C-A | P1_Y1 | ** | |||||
13457607-C-A | 11301931-C-A | ** | ||||||
3535949-A-T | 3667908-A-T | ** | ||||||
18892465-AT-A | 16780585-AT-A | ** | ||||||
18192452-C-A | 16080572-C-A | ** | ||||||
14831868-C-A | 12719935-C-A | ** | ||||||
6808156-A-G | 6940115-A-G | ** | ||||||
14741862-G-T | 12629930-G-T | ** | ||||||
7150692-CA-C | 7282651-CA-C | 8×A | ** | |||||
10664936-C-A | ** | |||||||
14598980-A-C | 12487180-A-C | ** | ||||||
10654108-C-A | ** | |||||||
10802071-C-A | ** | |||||||
11021604-C-T | ** | |||||||
11021629-C-T | ** | |||||||
21827903-C-A | 19666017-C-A | ** | ||||||
11021613-A-T | ** | |||||||
11021617-G-C | ** | |||||||
11021639-C-A | ** | |||||||
11021663-A-C | ** | |||||||
11021672-C-T | ** | |||||||
7333999-C-A | 7465958-C-A | ** | ||||||
13705415-G-C | 11549739-G-C | ** | ||||||
10802013-T-C | ** | |||||||
10802023-T-C | ** | |||||||
10802055-C-A | ** | |||||||
10802058-C-A | ** | |||||||
10802065-C-A | ** | |||||||
10802066-C-A | ** | |||||||
10802067-A-G | ** | |||||||
10760720-T-C | ** | |||||||
13726108-T-A | 11570432-T-A | ** | ||||||
20569379-G-T | 18407493-G-T | P5_Dst | ** | |||||
14598973-T-G | 12487173-T-G | ** | ||||||
15076180-C-CTT | 12964270-C-CTT | 16×T | ** | |||||
56744447-AAATGGAATGGAATGG-A | 5×AATGG | ** | ||||||
9231781-G-T | 9394172-G-T | ** | ||||||
2728131-C-A | 2860090-C-A | ** | ||||||
19062223-T-G | 16950343-T-G | ** | ||||||
10766394-C-T | ** | |||||||
11030124-C-A | ** | |||||||
10824192-C-T | ** | |||||||
13556858-T-A | 11401182-T-A | ** | ||||||
11643728-G-A | ** | |||||||
13227834-T-G | 11072158-T-G | ** | ||||||
10941723-A-T | FT437518 | ** | ||||||
10961371-C-T | ** | |||||||
10804474-T-G | ** | |||||||
9231764-C-A | 9394155-C-A | ** | ||||||
4931527-G-T | 5063486-G-T | ** | ||||||
16868591-C-A | 14756711-C-A | ** | ||||||
10652642-T-A | ** | |||||||
10766356-C-T | ** | |||||||
10930550-G-T | ** | |||||||
10946831-G-C | ** | |||||||
16583306-A-C | 14471426-A-C | ** | ||||||
11009240-T-C | ** | |||||||
22011653-C-A | 19849767-C-A | ** | ||||||
21084459-C-A | 18922573-C-A | ** | ||||||
10824193-A-T | ** | |||||||
5215731-C-A | 5347690-C-A | ** | ||||||
10921187-ACTCCG-A | ** | |||||||
10884762-C-T | ** | |||||||
23355396-A-T | 21193510-A-T | ** | ||||||
17315107-C-A | 15203227-C-A | ** | ||||||
14107690-C-A | 11986984-C-A | ** | ||||||
13460660-A-G | 11304984-A-G | ** | ||||||
13460673-G-A | 11304997-G-A | ** | ||||||
10796644-T-C | FT431601 | ** | ||||||
10796648-A-AC | ** | |||||||
10796649-T-TCCCA | ** | |||||||
10796666-C-CTACAA | ** | |||||||
10796699-T-TTGCAC | ** | |||||||
7108465-C-A | 7240424-C-A | ** | ||||||
9082145-C-A | 9244536-C-A | ** | ||||||
16324080-C-A | 14212200-C-A | ** | ||||||
9231552-G-T | 9393943-G-T | ** | ||||||
10691138-A-C | ** | |||||||
17372323-A-C | 15260443-A-C | ** | ||||||
15963975-C-G | 13852095-C-G | ** | ||||||
4908258-C-A | 5040217-C-A | ** | ||||||
10947160-C-A | ** | |||||||
19130713-C-A | 17018833-C-A | ** | ||||||
10981722-G-T | ** | |||||||
10657219-C-A | ** | |||||||
10793199-C-A | ** | |||||||
27499339-A-T | 25353192-A-T | P1_Y2 | ** | |||||
20989097-G-T | 18827211-G-T | P4_Dst | ** | |||||
10779310-C-A | ** | |||||||
14537998-C-A | 12426199-C-A | ** | ||||||
10882024-C-A | ** | |||||||
6517443-C-CT | 6649402-C-CT | 10×T | ** | |||||
10882022-T-G | ** | |||||||
13748322-A-T | 11592646-A-T | ** | ||||||
10895817-A-T | ** | |||||||
10663480-C-T | ** | |||||||
9499218-G-T | 9661609-G-T | ** | ||||||
10756877-A-C | FT227849 | ** | ||||||
10756842-C-T | ** | |||||||
4207957-C-A | 4339916-C-A | 22×A | ** | |||||
10849235-A-G | FGC77103 | ** | ||||||
2708178-G-T | 2840137-G-T | ** | ||||||
2789000-T-A | 2920959-T-A | ** | ||||||
2854829-C-A | 2986788-C-A | ** | ||||||
2906952-A-T | 3038911-A-T | ** | ||||||
2962924-G-T | 3094883-G-T | ** | ||||||
3407859-T-G | 3539818-T-G | ** | ||||||
3535948-A-G | 3667907-A-G | ** | ||||||
3606235-T-G | 3738194-T-G | ** | ||||||
3649132-A-C | 3781091-A-C | ** | ||||||
3655237-G-A | 3787196-G-A | ** | ||||||
3681237-A-T | 3813196-A-T | ** | ||||||
3820726-T-A | 3952685-T-A | ** | ||||||
3836409-C-A | 3968368-C-A | ** | ||||||
3980527-G-T | 4112486-G-T | ** | ||||||
3985827-CA-C | 4117786-CA-C | ** | ||||||
3987846-C-A | 4119805-C-A | ** | ||||||
4003463-C-T | 4135422-C-T | ** | ||||||
4079027-C-A | 4210986-C-A | ** | ||||||
4207947-G-T | 4339906-G-T | ** | ||||||
4207950-T-A | 4339909-T-A | ** | ||||||
4263387-G-T | 4395346-G-T | ** | ||||||
4263395-G-T | 4395354-G-T | ** | ||||||
4263396-A-T | 4395355-A-T | ** | ||||||
4263422-A-T | 4395381-A-T | ** | ||||||
4263427-C-A | 4395386-C-A | ** | ||||||
4301642-C-A | 4433601-C-A | ** | ||||||
4452844-C-A | 4584803-C-A | ** | ||||||
4460922-C-T | 4592881-C-T | ** | ||||||
4460929-C-A | 4592888-C-A | ** | ||||||
4472458-T-G | 4604417-T-G | ** | ||||||
4537794-T-C | 4669753-T-C | ** | ||||||
4548527-G-A | 4680486-G-A | ** | ||||||
4568346-C-A | 4700305-C-A | ** | ||||||
4598915-T-A | 4730874-T-A | ** | ||||||
4694898-C-T | 4826857-C-T | ** | ||||||
4969334-C-A | 5101293-C-A | ** | ||||||
5163486-C-A | 5295445-C-A | ** | ||||||
5171729-C-A | 5303688-C-A | ** | ||||||
5231232-C-A | 5363191-C-A | ** | ||||||
5236717-C-T | 5368676-C-T | ** | ||||||
5236950-C-A | 5368909-C-A | ** | ||||||
5247494-A-T | 5379453-A-T | ** | ||||||
5495270-A-G | 5627229-A-G | ** | ||||||
5793747-C-A | 5925706-C-A | ** | ||||||
5796294-T-A | 5928253-T-A | ** | ||||||
6092199-C-A | 6224158-C-A | ** | ||||||
6402678-A-C | 6534637-A-C | ** | ||||||
6404977-C-A | 6536936-C-A | ** | ||||||
6446229-G-T | 6578188-G-T | ** | ||||||
6484683-C-G | 6616642-C-G | ** | ||||||
6579455-G-T | 6711414-G-T | ** | ||||||
6748059-T-C | 6880018-T-C | ** | ||||||
6784552-A-T | 6916511-A-T | ** | ||||||
6918302-GG-A | 7050261-GG-A | ** | ||||||
6918311-T-C | 7050270-T-C | ** | ||||||
6918312-G-T | 7050271-G-T | ** | ||||||
6918319-TTG-A | 7050278-TTG-A | ** | ||||||
6919813-C-A | 7051772-C-A | ** | ||||||
7003205-C-A | 7135164-C-A | ** | ||||||
7044009-C-A | 7175968-C-A | ** | ||||||
7142785-C-A | 7274744-C-A | ** | ||||||
7214581-T-G | 7346540-T-G | ** | ||||||
7254443-T-A | 7386402-T-A | ** | ||||||
7332965-C-A | 7464924-C-A | ** | ||||||
7338715-C-A | 7470674-C-A | ** | ||||||
7363707-A-C | 7495666-A-C | ** | ||||||
7414038-C-A | 7545997-C-A | FT185235 | ** | |||||
7444124-T-A | 7576083-T-A | ** | ||||||
7861107-T-C | 7993066-T-C | ** | ||||||
7939681-C-A | 8071640-C-A | ** | ||||||
8043219-T-A | 8175178-T-A | ** | ||||||
8674123-C-A | 8806082-C-A | ** | ||||||
8678066-T-A | 8810025-T-A | ** | ||||||
8856676-A-C | 8988635-A-C | ** | ||||||
8901086-TATA-T | 9033045-TATA-T | ** | ||||||
8901090-TA-T | 9033049-TA-T | ** | ||||||
8977067-C-A | 9139458-C-A | ** | ||||||
9022855-C-A | 9185246-C-A | ** | ||||||
9117140-C-G | 9279531-C-G | ** | ||||||
9117141-A-T | 9279532-A-T | ** | ||||||
9184078-C-A | 9346469-C-A | ** | ||||||
9304904-G-A | 9467295-G-A | ** | ||||||
9386156-C-A | 9548547-C-A | ** | ||||||
9440335-T-A | 9602726-T-A | ** | ||||||
9803903-T-A | 9966294-T-A | ** | ||||||
9822875-C-A | 9985266-C-A | ** | ||||||
9932125-C-G | 10094516-C-G | ** | ||||||
9940650-A-T | 10103041-A-T | ** | ||||||
9940661-C-A | 10103052-C-A | ** | ||||||
10034117-C-A | 10196508-C-A | FT354061 | ** | |||||
10632681-C-T | ** | |||||||
10654114-T-G | ** | |||||||
10654128-T-TG | ** | |||||||
10654135-G-A | ** | |||||||
10654178-C-T | ** | |||||||
10655437-T-C | ** | |||||||
10661454-C-A | ** | |||||||
10667755-G-T | ** | |||||||
10669361-T-G | ** | |||||||
10671890-T-C | ** | |||||||
10677046-C-CTT | ** | |||||||
10677055-A-AG | ** | |||||||
10691122-C-G | ** | |||||||
10691132-C-G | ** | |||||||
10750976-TTCCCA-T | ** | |||||||
10761217-A-T | ** | |||||||
10763451-T-A | ** | |||||||
10766346-T-G | ** | |||||||
10766358-A-T | FT430272 | ** | ||||||
10766370-T-G | ** | |||||||
10766379-TCCAA-T | ** | |||||||
10766921-C-T | ** | |||||||
10770358-T-C | ** | |||||||
10783212-A-T | ** | |||||||
10784054-T-A | ** | |||||||
10784075-T-A | ** | |||||||
10801653-A-T | ** | |||||||
10802041-A-T | ** | |||||||
10804446-C-G | ** | |||||||
10804467-T-G | ** | |||||||
10804487-TC-T | ** | |||||||
10809374-ATTCCG-A | ** | |||||||
10827325-CTCCAT-C | ** | |||||||
10827348-C-G | ** | |||||||
10828200-T-A | ** | |||||||
10828211-T-G | ** | |||||||
10832498-T-G | ** | |||||||
10833327-C-A | ** | |||||||
10849195-GTATTC-G | ** | |||||||
10849206-C-G | ** | |||||||
10849233-T-C | ** | |||||||
10849236-CAATCT-C | ** | |||||||
10850049-C-A | ** | |||||||
10856987-C-A | ** | |||||||
10859880-C-A | ** | |||||||
10861589-C-A | ** | |||||||
10863530-T-G | ** | |||||||
10863559-T-A | ** | |||||||
10895652-T-A | ** | |||||||
10902176-C-T | ** | |||||||
10911480-C-T | ** | |||||||
10918600-G-T | FT178216 | ** | ||||||
10931988-C-A | ** | |||||||
10941821-C-A | ** | |||||||
10942746-CATTC-A | ** | |||||||
10942898-A-T | ** | |||||||
10942922-C-A | ** | |||||||
10946036-C-A | ** | |||||||
10947125-C-A | ** | |||||||
10947129-C-G | ** | |||||||
10947140-C-T | ** | |||||||
10947150-C-G | ** | |||||||
10947167-C-G | ** | |||||||
10947415-T-C | ** | |||||||
10947419-T-TC | ** | |||||||
10947424-T-C | ** | |||||||
10947435-T-A | ** | |||||||
10947444-C-T | ** | |||||||
10947446-A-C | ** | |||||||
10949903-ATTTCTTTTC-A | ** | |||||||
10956522-C-A | ** | |||||||
10958670-C-A | ** | |||||||
10960118-C-A | ** | |||||||
10964881-C-A | ** | |||||||
10964895-C-G | ** | |||||||
10965083-A-T | ** | |||||||
10965094-T-C | ** | |||||||
10978854-A-G | ** | |||||||
10981735-C-A | ** | |||||||
10981740-C-A | ** | |||||||
10994419-T-C | ** | |||||||
10994421-T-CAAATC | ** | |||||||
10994424-C-A | ** | |||||||
10995660-C-A | ** | |||||||
10995851-CTT-C | ** | |||||||
10999894-CATT-C | ** | |||||||
10999899-C-CTGCACTCGCGTTG | ** | |||||||
11001312-C-A | ** | |||||||
11001922-C-A | ** | |||||||
11005477-G-A | ** | |||||||
11009196-A-G | ** | |||||||
11016238-A-T | ** | |||||||
11017531-C-A | ** | |||||||
11017669-A-C | ** | |||||||
11029770-C-A | ** | |||||||
11030113-C-A | ** | |||||||
11035382-C-A | ** | |||||||
11035383-A-G | ** | |||||||
11035397-TACTTC-T | ** | |||||||
13222350-G-T | 11066674-G-T | ** | ||||||
13222354-G-T | 11066678-G-T | ** | ||||||
13222358-G-T | 11066682-G-T | ** | ||||||
13222361-G-T | 11066685-G-T | ** | ||||||
13355076-C-A | 11199400-C-A | ** | ||||||
13490588-C-A | 11334912-C-A | ** | ||||||
13634332-A-T | 11478656-A-T | ** | ||||||
13640719-A-T | 11485043-A-T | ** | ||||||
13643875-T-A | 11488199-T-A | ** | ||||||
13696838-T-G | 11541162-T-G | ** | ||||||
13748304-A-T | 11592628-A-T | ** | ||||||
13748307-G-T | 11592631-G-T | ** | ||||||
11658502-G-T | ** | |||||||
11674159-A-C | ** | |||||||
11674168-T-C | ** | |||||||
11674181-T-G | FT265115 | ** | ||||||
11674185-A-G | FT135176 | ** | ||||||
11674200-G-A | ** | |||||||
11674674-G-T | ** | |||||||
13856315-A-C | 11735609-A-C | ** | ||||||
13897003-T-G | 11776297-T-G | ** | ||||||
13928274-C-A | 11807568-C-A | ** | ||||||
13976909-G-C | 11856203-G-C | ** | ||||||
13988868-A-T | 11868162-A-T | ** | ||||||
13998031-T-G | 11877325-T-G | ** | ||||||
13998049-A-C | 11877343-A-C | ** | ||||||
14029132-C-A | 11908426-C-A | ** | ||||||
14041051-C-A | 11920345-C-A | ** | ||||||
14059172-T-G | 11938466-T-G | ** | ||||||
14089720-T-G | 11969014-T-G | ** | ||||||
14114887-A-C | 11994181-A-C | ** | ||||||
14180469-A-T | 12059763-A-T | ** | ||||||
14218551-C-A | 12097845-C-A | ** | ||||||
14219636-A-C | 12098930-A-C | ** | ||||||
14278614-C-A | 12157908-C-A | ** | ||||||
14372130-C-A | 12251426-C-A | ** | ||||||
14456868-CA-C | 12336141-CA-C | 9×A | ** | |||||
14468422-C-A | 12347691-C-A | ** | ||||||
14620397-A-T | 12508595-A-T | ** | ||||||
14668006-T-C | 12556072-T-C | ** | ||||||
14716151-C-A | 12604218-C-A | ** | ||||||
14719904-G-A | 12607972-G-A | ** | ||||||
14719928-G-T | 12607996-G-T | ** | ||||||
14754116-C-A | 12642185-C-A | ** | ||||||
14831877-A-T | 12719944-A-T | ** | ||||||
15011664-C-A | 12899752-C-A | ** | ||||||
15127819-A-T | 13015906-A-T | ** | ||||||
15174712-C-A | 13062798-C-A | ** | ||||||
15202254-A-G | 13090340-A-G | ** | ||||||
15280600-C-A | 13168699-C-A | ** | ||||||
15498036-A-T | 13386156-A-T | ** | ||||||
15743977-A-C | 13632097-A-C | ** | ||||||
15785942-C-A | 13674062-C-A | ** | ||||||
15824001-C-T | 13712121-C-T | ** | ||||||
15918457-C-G | 13806577-C-G | ** | ||||||
16001588-C-A | 13889708-C-A | ** | ||||||
16004755-T-C | 13892875-T-C | ** | ||||||
16016319-C-A | 13904439-C-A | ** | ||||||
16041322-C-G | 13929442-C-G | ** | ||||||
16056943-C-A | 13945063-C-A | ** | ||||||
16172188-T-G | 14060308-T-G | ** | ||||||
16214994-A-G | 14103114-A-G | ** | ||||||
16260947-A-T | 14149067-A-T | ** | ||||||
16270658-T-A | 14158778-T-A | ** | ||||||
16429232-A-T | 14317352-A-T | ** | ||||||
16522439-A-T | 14410559-A-T | ** | ||||||
16652053-C-T | 14540173-C-T | ** | ||||||
16706646-G-C | 14594766-G-C | ** | ||||||
16786172-C-A | 14674292-C-A | ** | ||||||
17027697-T-C | 14915817-T-C | ** | ||||||
17056776-T-G | 14944896-T-G | ** | ||||||
17058507-A-T | 14946627-A-T | ** | ||||||
17058718-T-G | 14946838-T-G | ** | ||||||
17103980-T-G | 14992100-T-G | ** | ||||||
17254961-C-A | 15143081-C-A | ** | ||||||
17300703-C-T | 15188823-C-T | ** | ||||||
17355599-T-C | 15243719-T-C | ** | ||||||
17372321-A-C | 15260441-A-C | ** | ||||||
17549712-C-A | 15437832-C-A | ** | ||||||
17629634-A-T | 15517754-A-T | ** | ||||||
17831093-C-A | 15719213-C-A | ** | ||||||
17878170-C-A | 15766290-C-A | ** | ||||||
17950807-A-C | 15838927-A-C | ** | ||||||
17955783-T-C | 15843903-T-C | ** | ||||||
17955816-C-G | 15843936-C-G | ** | ||||||
17955818-G-A | 15843938-G-A | ** | ||||||
17955819-T-C | 15843939-T-C | ** | ||||||
17955820-T-G | 15843940-T-G | ** | ||||||
17955841-G-A | 15843961-G-A | ** | ||||||
17955845-A-T | 15843965-A-T | ** | ||||||
17955859-G-C | 15843979-G-C | ** | ||||||
17955893-A-C | 15844013-A-C | ** | ||||||
18006703-A-T | 15894823-A-T | P7_Gap | ** | |||||
18093926-G-A | 15982046-G-A | ** | ||||||
18190576-T-G | 16078696-T-G | ** | ||||||
18340665-G-T | 16228785-G-T | P6_Prx | ** | |||||
18369909-A-T | 16258029-A-T | P6_Prx | ** | |||||
18382050-A-C | 16270170-A-C | P6_Gap | ** | |||||
18647598-T-TA | 16535718-T-TA | ** | ||||||
18728919-T-A | 16617039-T-A | ** | ||||||
18756189-T-G | 16644309-T-G | ** | ||||||
18892447-T-C | 16780567-T-C | ** | ||||||
18892473-T-A | 16780593-T-A | ** | ||||||
19095190-G-C | 16983310-G-C | ** | ||||||
19121865-T-G | 17009985-T-G | FTA48937 | ** | |||||
19121885-C-A | 17010005-C-A | ** | ||||||
19135235-T-A | 17023355-T-A | ** | ||||||
19251437-A-C | 17139557-A-C | ** | ||||||
19272165-T-A | 17160285-T-A | ** | ||||||
19275192-C-G | 17163312-C-G | ** | ||||||
19477445-A-C | 17365565-A-C | ** | ||||||
19597172-T-G | 17485292-T-G | P5_Prx | ** | |||||
19600578-T-G | 17488698-T-G | P5_Prx | ** | |||||
19657492-C-A | 17545612-C-A | P5_Prx | ** | |||||
20216468-TG-T | 18054582-TG-T | P5_Dst | ** | |||||
20216490-A-T | 18054604-A-T | P5_Dst | ** | |||||
20252845-G-C | 18090959-G-C | P5_Dst | ** | |||||
20675823-C-A | 18513937-C-A | P4_Prx | ** | |||||
20757289-T-TG | 18595403-T-TG | P4_Prx | ** | |||||
20771672-T-A | 18609786-T-A | P4_Prx | ** | |||||
20771673-G-T | 18609787-G-T | P4_Prx | ** | |||||
20771687-T-A | 18609801-T-A | P4_Prx | ** | |||||
20771689-C-A | 18609803-C-A | P4_Prx | ** | |||||
20771695-C-A | 18609809-C-A | P4_Prx | ** | |||||
20947666-C-A | 18785780-C-A | P4_Dst | ** | |||||
20947682-C-A | 18785796-C-A | P4_Dst | ** | |||||
20947701-T-A | 18785815-T-A | P4_Dst | ** | |||||
20947708-C-A | 18785822-C-A | P4_Dst | ** | |||||
20947714-T-A | 18785828-T-A | P4_Dst | ** | |||||
20947724-T-A | 18785838-T-A | P4_Dst | ** | |||||
20989069-C-A | 18827183-C-A | P4_Dst | ** | |||||
20989072-C-A | 18827186-C-A | P4_Dst | ** | |||||
20989095-C-A | 18827209-C-A | P4_Dst | ** | |||||
21152844-C-A | 18990958-C-A | ** | ||||||
21208292-C-A | 19046406-C-A | ** | ||||||
21238281-C-A | 19076395-C-A | ** | ||||||
21353186-A-T | 19191300-A-T | ** | ||||||
21435068-A-T | 19273182-A-T | ** | ||||||
21531452-T-A | 19369566-T-A | ** | ||||||
21597209-T-G | 19435323-T-G | ** | ||||||
21671991-C-A | 19510105-C-A | ** | ||||||
21700590-T-A | 19538704-T-A | ** | ||||||
21874719-C-G | 19712833-C-G | ** | ||||||
21993960-C-A | 19832074-C-A | ** | ||||||
22088838-C-A | 19926952-C-A | ** | ||||||
22175945-A-T | 20014059-A-T | ** | ||||||
22260714-C-G | 20098828-C-G | DYZ19 | ** | |||||
22430141-G-T | 20268255-G-T | DYZ19 | ** | |||||
22508697-A-G | 20346811-A-G | DYZ19 | ** | |||||
22562952-A-T | 20401066-A-T | ** | ||||||
22587798-A-C | 20425912-A-C | ** | ||||||
22634841-C-A | 20472955-C-A | ** | ||||||
22658238-T-C | 20496352-T-C | ** | ||||||
22798005-T-G | 20636119-T-G | ** | ||||||
22808839-A-G | 20646953-A-G | ** | ||||||
22855668-G-T | 20693782-G-T | ** | ||||||
22954646-C-A | 20792760-C-A | ** | ||||||
23066380-C-A | 20904494-C-A | ** | ||||||
23438950-C-A | 21277064-C-A | ** | ||||||
23512401-A-T | 21350515-A-T | ** | ||||||
23512435-A-T | 21350549-A-T | ** | ||||||
23512451-A-C | 21350565-A-C | ** | ||||||
23512452-C-G | 21350566-C-G | ** | ||||||
23576592-T-C | 21414706-T-C | ** | ||||||
23803201-G-T | 21641315-G-T | ** | ||||||
23825636-G-T | 21663750-G-T | ** | ||||||
23952517-G-T | 21806370-G-T | ** | ||||||
24278465-C-A | 22132318-C-A | P3_b1 | ** | |||||
24624508-A-T | 22478361-A-T | P3_t2 | ** | |||||
24671075-A-G | 22524928-A-G | P3_b2 | ** | |||||
25314090-G-A | 23167943-G-A | P2_r1 | ** | |||||
25885810-A-G | 23739663-A-G | P1_Y1 | ** | |||||
26054504-A-C | 23908357-A-C | P1_Y1 | ** | |||||
26224809-AT-A | 24078662-AT-A | P1_Y1 | ** | |||||
26276033-G-T | 24129886-G-T | P1_Y1 | ** | |||||
28462341-G-T | 26316194-G-T | ** | ||||||
28517306-C-A | 26371159-C-A | ** | ||||||
28549435-G-T | 26403288-G-T | ** | ||||||
28559001-A-G | 26412854-A-G | ** | ||||||
28560212-C-T | 26414065-C-T | ** | ||||||
28604611-A-G | 26458464-A-G | ** | ||||||
28604626-G-T | 26458479-G-T | ** | ||||||
28604627-GTA-G | 26458480-GTA-G | ** | ||||||
28604633-C-T | 26458486-C-T | FT161882 | ** | |||||
28604637-C-T | 26458490-C-T | ** | ||||||
28606227-C-A | 26460080-C-A | ** | ||||||
28612262-T-A | 26466115-T-A | ** | ||||||
28635043-T-A | 26488896-T-A | ** | ||||||
28794200-A-G | 26648053-A-G | ** | ||||||
28794207-G-T | 26648060-G-T | ** | ||||||
28794211-T-A | 26648064-T-A | ** | ||||||
28804013-A-C | 26657866-A-C | ** | ||||||
28804030-T-A | 26657883-T-A | ** | ||||||
28804032-C-A | 26657885-C-A | ** | ||||||
28804033-A-T | 26657886-A-T | ** | ||||||
56828942-T-G | ** | |||||||
56830197-C-A | ** | |||||||
56851667-A-T | ** | |||||||
22300709-T-C | 20138823-T-C | BY49282 FGC80522 | DYZ19 | *** | ||||
9023045-GT-G | 9185436-GT-G | 9×T | *** | |||||
7075240-CAAAA-C | 7207199-CAAAA-C | 17×A | *** | |||||
14213377-TGAGG-T | 12092671-TGAGG-T | 5×GAGG | *** | |||||
19829299-C-A | 17717419-C-A | P5_Prx | 27×T | *** | ||||
14517363-C-A | 12405564-C-A | *** | ||||||
10892850-C-A | *** | |||||||
10892857-A-C | *** | |||||||
21200894-CAA-C,CA | 19039008-CAA-C,CA | 14×A | *** | |||||
10951749-C-CCTTTT | *** | |||||||
18045371-CTT-C,CT | 15933491-CTT-C,CT | 18×T | *** | |||||
22729625-C-A | 20567739-C-A | *** | ||||||
10847512-C-A | *** | |||||||
21735288-C-A | 19573402-C-A | *** | ||||||
15592734-C-A | 13480854-C-A | *** | ||||||
4540476-C-A | 4672435-C-A | *** | ||||||
3706787-G-A | 3838746-G-A | *** | ||||||
5534970-G-A | 5666929-G-A | *** | ||||||
7115624-C-A | 7247583-C-A | *** | ||||||
7228545-C-A | 7360504-C-A | *** | ||||||
8481509-C-A | 8613468-C-A | *** | ||||||
9399979-C-A | 9562370-C-A | *** | ||||||
10768090-C-A,G | *** | |||||||
10786385-GCACTC-G | *** | |||||||
10948085-C-A | *** | |||||||
10995537-C-A | *** | |||||||
13922236-C-A | 11801530-C-A | *** | ||||||
15732032-C-A | 13620152-C-A | *** | ||||||
15859437-CTTTT-C,CT | 13747557-CTTTT-C,CT | 17×T | *** | |||||
17403660-C-A | 15291780-C-A | *** | ||||||
17878139-C-A | 15766259-C-A | *** | ||||||
22505720-T-A | 20343834-T-A | DYZ19 | *** | |||||
22935469-AT-A | 20773583-AT-A | *** | ||||||
28776908-TCAC-T | 26630761-TCAC-T | *** | ||||||
58980799-C-A | 56834652-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.