Andersson
BigY2: 560039MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 560039 |
---|---|---|---|---|---|---|---|
hg19:Y:22265905-C-A hg38:Y:20104019-C-A | DYZ19 | A* | |||||
hg19:Y:22305444-A-T hg38:Y:20143558-A-T | DYZ19 | A* | |||||
hg19:Y:21844894-T-TA hg38:Y:19683008-T-TA | 9×A | + | |||||
hg19:Y:22287917-C-G hg38:Y:20126031-C-G | BY43748 | DYZ19 | + | ||||
hg19:Y:14861705-G-A hg38:Y:12749771-G-A | Y92367 | Y | Y | + | |||
hg19:Y:21800259-T-C hg38:Y:19638373-T-C | Y107528 | Y | Y | + | |||
hg19:Y:4062795-T-C hg38:Y:4194754-T-C | Y81926 | + | |||||
hg19:Y:8282046-T-C hg38:Y:8414005-T-C | Y86358 | Y | Y | + | |||
hg19:Y:14105538-T-C hg38:Y:11984832-T-C | PH904 | Y | Y | + | |||
hg19:Y:14463169-A-C hg38:Y:12342442-A-C | Y91499 | Y | Y | + | |||
hg19:Y:15573434-C-G hg38:Y:13461554-C-G | PH1758 | Y | Y | + | |||
hg19:Y:15931164-A-G hg38:Y:13819284-A-G | Y95159 | Y | Y | + | |||
hg19:Y:17506316-T-A hg38:Y:15394436-T-A | PH3134 | Y | Y | + | |||
hg19:Y:18166213-A-G hg38:Y:16054333-A-G | Y101501 | Y | Y | + | |||
hg19:Y:18880348-C-T hg38:Y:16768468-C-T | Y102924 | Y | Y | + | |||
hg19:Y:22164860-A-C hg38:Y:20002974-A-C | Y108552 | Y | Y | + | |||
hg19:Y:22419876-T-A hg38:Y:20257990-T-A | BY217754 | DYZ19 | + | ||||
hg19:Y:22464008-C-T hg38:Y:20302122-C-T | BY221234 | DYZ19 | + | ||||
hg19:Y:23526654-C-G hg38:Y:21364768-C-G | Y111774 | Y | Y | + | |||
hg19:Y:23984646-A-G hg38:Y:21838499-A-G | Y112576 | Y | + | ||||
hg19:Y:22422507-C-T hg38:Y:20260621-C-T | BY180966 | DYZ19 | * | ||||
hg19:Y:17587885-CA-C hg38:Y:15476005-CA-C | 10×A | * | |||||
hg19:Y:22340935-G-A hg38:Y:20179049-G-A | DYZ19 | * | |||||
hg19:Y:28808136-G-A hg38:Y:26661989-G-A | BY28547 | * | |||||
hg19:Y:18688520-AC-A hg38:Y:16576640-AC-A | ** | ||||||
hg19:Y:19073865-TATATAC-T hg38:Y:16961985-TATATAC-T | ** | ||||||
hg19:Y:15566817-G-A hg38:Y:13454937-G-A | 22×A | ** | |||||
hg19:Y:22287902-A-C hg38:Y:20126016-A-C | BY216199 | DYZ19 | ** | ||||
hg19:Y:28567952-G-T hg38:Y:26421805-G-T | Z11322 | ** | |||||
hg19:Y:58995079-C-A hg38:Y:56848932-C-A | ** | ||||||
hg19:Y:14195815-T-A hg38:Y:12075109-T-A | ** | ||||||
hg19:Y:15904148-T-A hg38:Y:13792268-T-A | ** | ||||||
hg19:Y:2718915-C-T hg38:Y:2850874-C-T | BY22163 | BY22164 | ** | ||||
hg19:Y:27497058-C-T hg38:Y:25350911-C-T | P1_Y2 | ** | |||||
hg19:Y:27497066-C-T hg38:Y:25350919-C-T | P1_Y2 | ** | |||||
hg19:Y:16095827-C-A hg38:Y:13983947-C-A | ** | ||||||
hg19:Y:18398190-CACAT-C hg38:Y:16286310-CACAT-C | P6_Gap | ** | |||||
hg19:Y:16062130-C-A hg38:Y:13950250-C-A | ** | ||||||
hg19:Y:7107463-C-A hg38:Y:7239422-C-A | ** | ||||||
hg38:Y:10796665-T-A | ** | ||||||
hg19:Y:20459080-A-T hg38:Y:18297194-A-T | P5_Dst | ** | |||||
hg38:Y:56833129-C-G | ** | ||||||
hg38:Y:10892544-A-T | ** | ||||||
hg38:Y:11643692-T-C | DYZ17 | ** | |||||
hg38:Y:11643683-G-A | DYZ17 | ** | |||||
hg19:Y:13213871-C-A hg38:Y:11058195-C-A | ** | ||||||
hg19:Y:6541044-C-A hg38:Y:6673003-C-A | ** | ||||||
hg19:Y:23019687-C-A hg38:Y:20857801-C-A | ** | ||||||
hg19:Y:16707781-G-T hg38:Y:14595901-G-T | ** | ||||||
hg38:Y:11030095-AGTCAA-G | ** | ||||||
hg19:Y:20707550-C-A hg38:Y:18545664-C-A | P4_Prx | ** | |||||
hg19:Y:16941528-C-A hg38:Y:14829648-C-A | ** | ||||||
hg19:Y:15866228-T-A hg38:Y:13754348-T-A | ** | ||||||
hg19:Y:20825705-C-A hg38:Y:18663819-C-A | P4_Gap | ** | |||||
hg19:Y:24363627-C-T hg38:Y:22217480-C-T | ** | ||||||
hg19:Y:3853581-CT-C hg38:Y:3985540-CT-C | 8×T | ** | |||||
hg19:Y:22079822-C-A hg38:Y:19917936-C-A | ** | ||||||
hg19:Y:7221638-C-A hg38:Y:7353597-C-A | ** | ||||||
hg19:Y:22811981-T-A hg38:Y:20650095-T-A | ** | ||||||
hg38:Y:11643708-G-C | DYZ17 | ** | |||||
hg19:Y:8799709-C-A hg38:Y:8931668-C-A | ** | ||||||
hg38:Y:10821643-A-G | ** | ||||||
hg19:Y:27966855-C-A hg38:Y:25820708-C-A | P1_Y2 | ** | |||||
hg38:Y:10648141-G-C | ** | ||||||
hg19:Y:8649803-G-A hg38:Y:8781762-G-A | ** | ||||||
hg19:Y:27872566-AG-A hg38:Y:25726419-AG-A | P1_Y2 | ** | |||||
hg19:Y:14077205-C-A hg38:Y:11956499-C-A | ** | ||||||
hg19:Y:13460814-C-T hg38:Y:11305138-C-T | ** | ||||||
hg19:Y:22537309-T-A hg38:Y:20375423-T-A | ** | ||||||
hg19:Y:17718448-A-G hg38:Y:15606568-A-G | ** | ||||||
hg19:Y:28614260-C-A hg38:Y:26468113-C-A | ** | ||||||
hg38:Y:10782883-CTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAT-C | ** | ||||||
hg19:Y:20404473-A-G hg38:Y:18242587-A-G | P5_Dst | ** | |||||
hg19:Y:25995545-A-T hg38:Y:23849398-A-T | P1_Y1 | ** | |||||
hg19:Y:16033603-C-A hg38:Y:13921723-C-A | ** | ||||||
hg19:Y:28742545-G-T hg38:Y:26596398-G-T | ** | ||||||
hg19:Y:6944002-C-A hg38:Y:7075961-C-A | ** | ||||||
hg19:Y:22520783-C-A hg38:Y:20358897-C-A | ** | ||||||
hg19:Y:22689963-C-A hg38:Y:20528077-C-A | ** | ||||||
hg19:Y:15899064-TAA-T hg38:Y:13787184-TAA-T | 11×A | ** | |||||
hg19:Y:22536407-C-A hg38:Y:20374521-C-A | ** | ||||||
hg19:Y:18343632-A-T hg38:Y:16231752-A-T | P6_Prx | ** | |||||
hg38:Y:10989420-C-T | ** | ||||||
hg38:Y:10989421-C-T | ** | ||||||
hg19:Y:15352886-T-A hg38:Y:13241005-T-A | ** | ||||||
hg19:Y:17575522-G-T hg38:Y:15463642-G-T | ** | ||||||
hg19:Y:14570755-CAT-C hg38:Y:12458955-CAT-C | ** | ||||||
hg19:Y:17004591-T-A hg38:Y:14892711-T-A | ** | ||||||
hg19:Y:15397902-C-A hg38:Y:13286022-C-A | FT59358 | ** | |||||
hg19:Y:17575523-G-T hg38:Y:15463643-G-T | ** | ||||||
hg19:Y:3412087-G-T hg38:Y:3544046-G-T | ** | ||||||
hg38:Y:10913354-G-A | ** | ||||||
hg38:Y:10913380-G-T | FT82342 | ** | |||||
hg38:Y:10989482-T-A | ** | ||||||
hg19:Y:3286327-C-A hg38:Y:3418286-C-A | ** | ||||||
hg19:Y:3890214-G-T hg38:Y:4022173-G-T | ** | ||||||
hg19:Y:22088844-C-A hg38:Y:19926958-C-A | ** | ||||||
hg19:Y:21922067-C-A hg38:Y:19760181-C-A | ** | ||||||
hg19:Y:14053475-C-A hg38:Y:11932769-C-A | ** | ||||||
hg19:Y:6829371-G-A hg38:Y:6961330-G-A | ** | ||||||
hg38:Y:10991402-C-A | ** | ||||||
hg19:Y:5017604-C-T hg38:Y:5149563-C-T | ** | ||||||
hg38:Y:56756830-A-C | ** | ||||||
hg19:Y:15352880-T-A hg38:Y:13240999-T-A | ** | ||||||
hg19:Y:2909551-ATTT-A hg38:Y:3041510-ATTT-A | 13×T | ** | |||||
hg19:Y:3165156-G-T hg38:Y:3297115-G-T | ** | ||||||
hg19:Y:21133529-C-G hg38:Y:18971643-C-G | ** | ||||||
hg38:Y:11648849-C-A | DYZ17 | ** | |||||
hg19:Y:2810393-A-C hg38:Y:2942352-A-C | ** | ||||||
hg19:Y:24407183-A-T hg38:Y:22261036-A-T | ** | ||||||
hg38:Y:11643751-A-AAGAAT | DYZ17 | ** | |||||
hg19:Y:17004597-C-G hg38:Y:14892717-C-G | ** | ||||||
hg38:Y:11030233-A-C | ** | ||||||
hg19:Y:5603764-C-A hg38:Y:5735723-C-A | ** | ||||||
hg19:Y:24614199-C-A hg38:Y:22468052-C-A | P3_t2 | ** | |||||
hg38:Y:10989498-C-T | ** | ||||||
hg19:Y:17255023-T-A hg38:Y:15143143-T-A | ** | ||||||
hg19:Y:15743722-C-A hg38:Y:13631842-C-A | ** | ||||||
hg19:Y:20459087-G-T hg38:Y:18297201-G-T | P5_Dst | ** | |||||
hg19:Y:19062059-C-A hg38:Y:16950179-C-A | ** | ||||||
hg19:Y:21241708-C-A hg38:Y:19079822-C-A | ** | ||||||
hg38:Y:10989455-C-G | ** | ||||||
hg38:Y:10989470-C-A | ** | ||||||
hg19:Y:28777914-C-A hg38:Y:26631767-C-A | S26504 | ** | |||||
hg19:Y:21427056-C-A hg38:Y:19265170-C-A | ** | ||||||
hg19:Y:7534565-C-T hg38:Y:7666524-C-T | ** | ||||||
hg19:Y:16625970-G-T hg38:Y:14514090-G-T | ** | ||||||
hg19:Y:18343721-C-A hg38:Y:16231841-C-A | P6_Prx | ** | |||||
hg19:Y:9823541-C-A hg38:Y:9985932-C-A | ** | ||||||
hg38:Y:10993292-G-C | ** | ||||||
hg38:Y:21780392-T-C | ** | ||||||
hg19:Y:7017160-C-A hg38:Y:7149119-C-A | ** | ||||||
hg38:Y:11643697-T-C | DYZ17 | ** | |||||
hg19:Y:2696505-C-A hg38:Y:2828464-C-A | ** | ||||||
hg19:Y:3165165-G-T hg38:Y:3297124-G-T | ** | ||||||
hg19:Y:3252938-T-G hg38:Y:3384897-T-G | ** | ||||||
hg19:Y:3367112-A-T hg38:Y:3499071-A-T | ** | ||||||
hg19:Y:3408314-G-T hg38:Y:3540273-G-T | ** | ||||||
hg19:Y:3443125-G-A hg38:Y:3575084-G-A | ** | ||||||
hg19:Y:3536203-T-A hg38:Y:3668162-T-A | ** | ||||||
hg19:Y:3625975-C-T hg38:Y:3757934-C-T | ** | ||||||
hg19:Y:3746203-G-C hg38:Y:3878162-G-C | ** | ||||||
hg19:Y:3753420-C-A hg38:Y:3885379-C-A | ** | ||||||
hg19:Y:4024834-G-A hg38:Y:4156793-G-A | ** | ||||||
hg19:Y:4059649-A-T hg38:Y:4191608-A-T | ** | ||||||
hg19:Y:4081019-G-A hg38:Y:4212978-G-A | ** | ||||||
hg19:Y:4155651-AT-A hg38:Y:4287610-AT-A | 9×T | ** | |||||
hg19:Y:4178875-A-G hg38:Y:4310834-A-G | ** | ||||||
hg19:Y:4201057-C-A hg38:Y:4333016-C-A | ** | ||||||
hg19:Y:4260615-G-T hg38:Y:4392574-G-T | ** | ||||||
hg19:Y:4261942-C-A hg38:Y:4393901-C-A | ** | ||||||
hg19:Y:4357427-A-G hg38:Y:4489386-A-G | ** | ||||||
hg19:Y:4498215-C-T hg38:Y:4630174-C-T | ** | ||||||
hg19:Y:4567157-T-A hg38:Y:4699116-T-A | ** | ||||||
hg19:Y:4592039-C-T hg38:Y:4723998-C-T | ** | ||||||
hg19:Y:4766342-G-T hg38:Y:4898301-G-T | ** | ||||||
hg19:Y:4906676-C-A hg38:Y:5038635-C-A | ** | ||||||
hg19:Y:4969124-T-A hg38:Y:5101083-T-A | ** | ||||||
hg19:Y:5081156-C-T hg38:Y:5213115-C-T | ** | ||||||
hg19:Y:5109854-A-T hg38:Y:5241813-A-T | ** | ||||||
hg19:Y:5190018-A-AAT hg38:Y:5321977-A-AAT | ** | ||||||
hg19:Y:5242576-A-T hg38:Y:5374535-A-T | ** | ||||||
hg19:Y:5426536-C-A hg38:Y:5558495-C-A | ** | ||||||
hg19:Y:5443134-C-A hg38:Y:5575093-C-A | ** | ||||||
hg19:Y:5537680-A-T hg38:Y:5669639-A-T | ** | ||||||
hg19:Y:5587133-G-T hg38:Y:5719092-G-T | FTA48085 | ** | |||||
hg19:Y:5597246-T-A hg38:Y:5729205-T-A | ** | ||||||
hg19:Y:5786890-C-G hg38:Y:5918849-C-G | ** | ||||||
hg19:Y:5858421-C-A hg38:Y:5990380-C-A | ** | ||||||
hg19:Y:5934506-A-T hg38:Y:6066465-A-T | ** | ||||||
hg19:Y:5968421-G-T hg38:Y:6100380-G-T | ** | ||||||
hg19:Y:6201946-C-A hg38:Y:6333905-C-A | IR3_Dst | ** | |||||
hg19:Y:6452985-T-A hg38:Y:6584944-T-A | ** | ||||||
hg19:Y:6508108-C-A hg38:Y:6640067-C-A | ** | ||||||
hg19:Y:6582361-C-A hg38:Y:6714320-C-A | ** | ||||||
hg19:Y:6642963-C-A hg38:Y:6774922-C-A | ** | ||||||
hg19:Y:6720470-T-A hg38:Y:6852429-T-A | ** | ||||||
hg19:Y:6724206-G-C hg38:Y:6856165-G-C | ** | ||||||
hg19:Y:6948409-G-T hg38:Y:7080368-G-T | ** | ||||||
hg19:Y:7000775-A-G hg38:Y:7132734-A-G | ** | ||||||
hg19:Y:7100128-A-G hg38:Y:7232087-A-G | ** | ||||||
hg19:Y:7107297-G-T hg38:Y:7239256-G-T | ** | ||||||
hg19:Y:7115639-T-C hg38:Y:7247598-T-C | ** | ||||||
hg19:Y:7197386-T-C hg38:Y:7329345-T-C | ** | ||||||
hg19:Y:7261207-C-A hg38:Y:7393166-C-A | ** | ||||||
hg19:Y:7269704-C-T hg38:Y:7401663-C-T | ** | ||||||
hg19:Y:7645317-C-T hg38:Y:7777276-C-T | ** | ||||||
hg19:Y:7995993-C-T hg38:Y:8127952-C-T | ** | ||||||
hg19:Y:8061732-T-G hg38:Y:8193691-T-G | ** | ||||||
hg38:Y:9110950-G-A | ** | ||||||
hg38:Y:9119218-G-C | ** | ||||||
hg19:Y:9040710-A-G hg38:Y:9203101-A-G | ** | ||||||
hg19:Y:9444924-C-A hg38:Y:9607315-C-A | ** | ||||||
hg19:Y:9471649-T-C hg38:Y:9634040-T-C | ** | ||||||
hg19:Y:9639184-T-TA hg38:Y:9801575-T-TA | IR3_Prx | ** | |||||
hg19:Y:9761163-A-T hg38:Y:9923554-A-T | ** | ||||||
hg19:Y:9890399-C-T hg38:Y:10052790-C-T | ** | ||||||
hg19:Y:9925287-T-A hg38:Y:10087678-T-A | ** | ||||||
hg38:Y:10662443-T-C | ** | ||||||
hg38:Y:10667011-T-TTCGGGTTAAC | ** | ||||||
hg38:Y:10670883-A-C | ** | ||||||
hg38:Y:10682570-T-C | ** | ||||||
hg38:Y:10688264-C-A | ** | ||||||
hg38:Y:10692096-A-C | ** | ||||||
hg38:Y:10755622-C-A | ** | ||||||
hg38:Y:10767226-A-C | ** | ||||||
hg38:Y:10781254-C-A | ** | ||||||
hg38:Y:10789332-T-TC | ** | ||||||
hg38:Y:10789333-TC-T | ** | ||||||
hg38:Y:10791323-T-C | ** | ||||||
hg38:Y:10844234-A-T | ** | ||||||
hg38:Y:10844242-C-G | ** | ||||||
hg38:Y:10864041-C-A | ** | ||||||
hg38:Y:10867397-C-A | ** | ||||||
hg38:Y:10876792-T-G | ** | ||||||
hg38:Y:10877713-C-T | ** | ||||||
hg38:Y:10935547-CACT-C | ** | ||||||
hg38:Y:10935552-CAT-C | ** | ||||||
hg38:Y:10935587-C-CACACT | ** | ||||||
hg38:Y:10935607-C-A | ** | ||||||
hg38:Y:10943503-C-A | ** | ||||||
hg38:Y:10953711-C-A | FT438006 | ** | |||||
hg38:Y:10965351-T-G | ** | ||||||
hg38:Y:10976974-A-T | ** | ||||||
hg38:Y:10977575-C-A | ** | ||||||
hg38:Y:10989484-C-T | ** | ||||||
hg38:Y:10989513-C-T | ** | ||||||
hg38:Y:11020523-G-C | ** | ||||||
hg19:Y:13216640-C-T hg38:Y:11060964-C-T | ** | ||||||
hg19:Y:13269538-C-T hg38:Y:11113862-C-T | ** | ||||||
hg19:Y:13269593-A-G hg38:Y:11113917-A-G | ** | ||||||
hg19:Y:13329203-G-A hg38:Y:11173527-G-A | ** | ||||||
hg19:Y:13394950-T-C hg38:Y:11239274-T-C | ** | ||||||
hg19:Y:13405078-A-T hg38:Y:11249402-A-T | ** | ||||||
hg19:Y:13466001-C-A hg38:Y:11310325-C-A | ** | ||||||
hg19:Y:13637106-C-A hg38:Y:11481430-C-A | ** | ||||||
hg19:Y:13706327-T-C hg38:Y:11550651-T-C | DYZ17 | ** | |||||
hg19:Y:13715214-T-C hg38:Y:11559538-T-C | FT449490 | DYZ17 | ** | ||||
hg38:Y:11643744-G-GTACGGAATAGAATGT | DYZ17 | ** | |||||
hg38:Y:11651046-A-G | DYZ17 | ** | |||||
hg38:Y:11654067-G-T | FT69750 | DYZ17 | ** | ||||
hg38:Y:11666441-T-G | DYZ17 | ** | |||||
hg19:Y:13811012-T-A hg38:Y:11690306-T-A | DYZ17 | ** | |||||
hg19:Y:13836768-G-A hg38:Y:11716062-G-A | DYZ17 | ** | |||||
hg19:Y:13856055-G-T hg38:Y:11735349-G-T | Y89823 | DYZ17 | ** | ||||
hg19:Y:13856336-T-C hg38:Y:11735630-T-C | DYZ17 | ** | |||||
hg19:Y:13942456-A-G hg38:Y:11821750-A-G | ** | ||||||
hg19:Y:13974673-A-C hg38:Y:11853967-A-C | ** | ||||||
hg19:Y:14157027-G-T hg38:Y:12036321-G-T | ** | ||||||
hg19:Y:14161811-C-A hg38:Y:12041105-C-A | ** | ||||||
hg19:Y:14184356-T-A hg38:Y:12063650-T-A | ** | ||||||
hg19:Y:14184357-G-A hg38:Y:12063651-G-A | ** | ||||||
hg19:Y:14195804-T-G hg38:Y:12075098-T-G | ** | ||||||
hg19:Y:14278494-A-T hg38:Y:12157788-A-T | ** | ||||||
hg19:Y:14284733-C-G hg38:Y:12164027-C-G | ** | ||||||
hg19:Y:14284743-A-T hg38:Y:12164037-A-T | ** | ||||||
hg19:Y:14286027-T-C hg38:Y:12165321-T-C | ** | ||||||
hg19:Y:14316332-T-C hg38:Y:12195626-T-C | ** | ||||||
hg19:Y:14470327-C-T hg38:Y:12349596-C-T | ** | ||||||
hg19:Y:14483633-C-A hg38:Y:12362902-C-A | ** | ||||||
hg19:Y:14483741-G-C hg38:Y:12363010-G-C | ** | ||||||
hg19:Y:14528505-C-T hg38:Y:12416706-C-T | ** | ||||||
hg19:Y:14563500-C-A hg38:Y:12451700-C-A | ** | ||||||
hg19:Y:14608268-C-A hg38:Y:12496470-C-A | ** | ||||||
hg19:Y:14611767-T-C hg38:Y:12499973-T-C | ** | ||||||
hg19:Y:14675652-C-A hg38:Y:12563718-C-A | ** | ||||||
hg19:Y:14711825-C-A hg38:Y:12599892-C-A | FT350757 | ** | |||||
hg19:Y:14743875-A-C hg38:Y:12631944-A-C | ** | ||||||
hg19:Y:14994254-C-T hg38:Y:12882339-C-T | ** | ||||||
hg19:Y:15131637-G-T hg38:Y:13019724-G-T | ** | ||||||
hg19:Y:15173673-T-A hg38:Y:13061759-T-A | ** | ||||||
hg19:Y:15324053-C-A hg38:Y:13212171-C-A | ** | ||||||
hg19:Y:15366040-A-G hg38:Y:13254160-A-G | FT367090 | ** | |||||
hg19:Y:15504083-C-A hg38:Y:13392203-C-A | ** | ||||||
hg19:Y:15658003-C-A hg38:Y:13546123-C-A | ** | ||||||
hg19:Y:15686952-C-A hg38:Y:13575072-C-A | ** | ||||||
hg19:Y:15701108-T-G hg38:Y:13589228-T-G | ** | ||||||
hg19:Y:15709297-G-C hg38:Y:13597417-G-C | ** | ||||||
hg19:Y:15760988-GC-G hg38:Y:13649108-GC-G | ** | ||||||
hg19:Y:15927064-C-A hg38:Y:13815184-C-A | ** | ||||||
hg19:Y:15969753-A-T hg38:Y:13857873-A-T | ** | ||||||
hg19:Y:16005994-G-A hg38:Y:13894114-G-A | ** | ||||||
hg19:Y:16018283-TAA-T hg38:Y:13906403-TAA-T | 10×A | ** | |||||
hg19:Y:16044209-T-A hg38:Y:13932329-T-A | ** | ||||||
hg19:Y:16089777-C-G hg38:Y:13977897-C-G | ** | ||||||
hg19:Y:16351506-C-A hg38:Y:14239626-C-A | ** | ||||||
hg19:Y:16380643-C-A hg38:Y:14268763-C-A | ** | ||||||
hg19:Y:16462525-T-A hg38:Y:14350645-T-A | ** | ||||||
hg19:Y:16703726-C-T hg38:Y:14591846-C-T | ** | ||||||
hg19:Y:16830969-C-A hg38:Y:14719089-C-A | ** | ||||||
hg19:Y:16928861-C-T hg38:Y:14816981-C-T | ** | ||||||
hg19:Y:16968361-C-A hg38:Y:14856481-C-A | ** | ||||||
hg19:Y:16980171-C-T hg38:Y:14868291-C-T | ** | ||||||
hg19:Y:16989327-C-A hg38:Y:14877447-C-A | ** | ||||||
hg19:Y:17013174-C-A hg38:Y:14901294-C-A | ** | ||||||
hg19:Y:17013185-TA-T hg38:Y:14901305-TA-T | ** | ||||||
hg19:Y:17097983-T-A hg38:Y:14986103-T-A | ** | ||||||
hg19:Y:17098711-A-C hg38:Y:14986831-A-C | ** | ||||||
hg19:Y:17146546-GC-G hg38:Y:15034666-GC-G | ** | ||||||
hg19:Y:17255045-G-A hg38:Y:15143165-G-A | ** | ||||||
hg19:Y:17277317-G-A hg38:Y:15165437-G-A | ** | ||||||
hg19:Y:17285179-G-T hg38:Y:15173299-G-T | ** | ||||||
hg19:Y:17297438-C-A hg38:Y:15185558-C-A | ** | ||||||
hg19:Y:17301169-G-C hg38:Y:15189289-G-C | ** | ||||||
hg19:Y:17380003-C-A hg38:Y:15268123-C-A | ** | ||||||
hg19:Y:17500772-G-A hg38:Y:15388892-G-A | ** | ||||||
hg19:Y:17549438-T-C hg38:Y:15437558-T-C | ** | ||||||
hg19:Y:17560613-T-C hg38:Y:15448733-T-C | ** | ||||||
hg19:Y:17692037-T-C hg38:Y:15580157-T-C | ** | ||||||
hg19:Y:17714749-A-T hg38:Y:15602869-A-T | ** | ||||||
hg19:Y:17804336-A-G hg38:Y:15692456-A-G | ** | ||||||
hg19:Y:17824190-G-T hg38:Y:15712310-G-T | ** | ||||||
hg19:Y:17859982-T-C hg38:Y:15748102-T-C | ** | ||||||
hg19:Y:18106644-C-T hg38:Y:15994764-C-T | Y101320 | ** | |||||
hg19:Y:18184600-T-C hg38:Y:16072720-T-C | ** | ||||||
hg19:Y:18194109-T-C hg38:Y:16082229-T-C | ** | ||||||
hg19:Y:18625375-G-T hg38:Y:16513495-G-T | ** | ||||||
hg19:Y:18844011-T-C hg38:Y:16732131-T-C | ** | ||||||
hg19:Y:18985086-T-C hg38:Y:16873206-T-C | ** | ||||||
hg19:Y:18990652-A-G hg38:Y:16878772-A-G | ** | ||||||
hg19:Y:19023256-G-T hg38:Y:16911376-G-T | FT96972 | ** | |||||
hg19:Y:19031468-A-G hg38:Y:16919588-A-G | ** | ||||||
hg19:Y:19300672-G-A hg38:Y:17188792-G-A | ** | ||||||
hg19:Y:19508192-T-C hg38:Y:17396312-T-C | ** | ||||||
hg19:Y:19539779-A-T hg38:Y:17427899-A-T | ** | ||||||
hg19:Y:19539781-G-T hg38:Y:17427901-G-T | ** | ||||||
hg19:Y:19539788-C-T hg38:Y:17427908-C-T | ** | ||||||
hg19:Y:19744943-A-G hg38:Y:17633063-A-G | FT452359 | P5_Prx | ** | ||||
hg19:Y:19885257-A-G hg38:Y:17773377-A-G | P5_Prx | ** | |||||
hg19:Y:19935461-T-A hg38:Y:17823581-T-A | P5_Prx | ** | |||||
hg19:Y:20128409-G-T hg38:Y:18016529-G-T | P5_Dst | ** | |||||
hg19:Y:20212996-G-T hg38:Y:18051110-G-T | P5_Dst | ** | |||||
hg19:Y:20637575-A-T hg38:Y:18475689-A-T | P4_Prx | ** | |||||
hg19:Y:20637638-G-T hg38:Y:18475752-G-T | P4_Prx | ** | |||||
hg19:Y:20661844-C-CT hg38:Y:18499958-C-CT | P4_Prx | ** | |||||
hg19:Y:20778599-G-T hg38:Y:18616713-G-T | P4_Prx | ** | |||||
hg19:Y:20871049-T-A hg38:Y:18709163-T-A | P4_Dst | ** | |||||
hg19:Y:21032996-A-G hg38:Y:18871110-A-G | ** | ||||||
hg19:Y:21087309-C-A hg38:Y:18925423-C-A | ** | ||||||
hg19:Y:21095699-A-G hg38:Y:18933813-A-G | ** | ||||||
hg19:Y:21244068-C-A hg38:Y:19082182-C-A | ** | ||||||
hg19:Y:21299379-A-C hg38:Y:19137493-A-C | ** | ||||||
hg19:Y:21299384-A-G hg38:Y:19137498-A-G | FT240451 | ** | |||||
hg19:Y:21381983-G-A hg38:Y:19220097-G-A | ** | ||||||
hg19:Y:21381989-G-A hg38:Y:19220103-G-A | ** | ||||||
hg19:Y:21382062-A-G hg38:Y:19220176-A-G | ** | ||||||
hg19:Y:21388689-G-A hg38:Y:19226803-G-A | ** | ||||||
hg19:Y:21410155-A-G hg38:Y:19248269-A-G | ** | ||||||
hg19:Y:21495330-CAAAA-C hg38:Y:19333444-CAAAA-C | 13×A | ** | |||||
hg19:Y:21600215-A-G hg38:Y:19438329-A-G | ** | ||||||
hg19:Y:21802878-A-T hg38:Y:19640992-A-T | ** | ||||||
hg19:Y:21802888-G-C hg38:Y:19641002-G-C | ** | ||||||
hg19:Y:21922070-G-A hg38:Y:19760184-G-A | ** | ||||||
hg19:Y:21922080-C-A hg38:Y:19760194-C-A | 23×A | ** | |||||
hg19:Y:21946446-T-C hg38:Y:19784560-T-C | ** | ||||||
hg19:Y:21959265-C-A hg38:Y:19797379-C-A | ** | ||||||
hg19:Y:21979891-T-A hg38:Y:19818005-T-A | ** | ||||||
hg19:Y:22076286-C-A hg38:Y:19914400-C-A | ** | ||||||
hg19:Y:22091364-A-T hg38:Y:19929478-A-T | ** | ||||||
hg19:Y:22092900-G-T hg38:Y:19931014-G-T | ** | ||||||
hg19:Y:22164562-AAAAAGAC-A hg38:Y:20002676-AAAAAGAC-A | ** | ||||||
hg19:Y:22166663-T-A hg38:Y:20004777-T-A | ** | ||||||
hg19:Y:22287875-C-G hg38:Y:20125989-C-G | DYZ19 | ** | |||||
hg19:Y:22287881-G-T hg38:Y:20125995-G-T | BY216194 | DYZ19 | ** | ||||
hg19:Y:22757620-T-A hg38:Y:20595734-T-A | ** | ||||||
hg19:Y:22876425-C-A hg38:Y:20714539-C-A | ** | ||||||
hg19:Y:23185978-G-T hg38:Y:21024092-G-T | ** | ||||||
hg19:Y:23276576-T-G hg38:Y:21114690-T-G | ** | ||||||
hg19:Y:23439936-A-G hg38:Y:21278050-A-G | ** | ||||||
hg19:Y:23786380-T-C hg38:Y:21624494-T-C | ** | ||||||
hg19:Y:23810556-C-A hg38:Y:21648670-C-A | ** | ||||||
hg38:Y:21780401-T-A | ** | ||||||
hg19:Y:24127468-C-A hg38:Y:21981321-C-A | P3_b1 | ** | |||||
hg19:Y:24264449-A-G hg38:Y:22118302-A-G | P3_b1 | ** | |||||
hg19:Y:24363623-C-T hg38:Y:22217476-C-T | ** | ||||||
hg19:Y:24371911-G-T hg38:Y:22225764-G-T | ** | ||||||
hg19:Y:24422573-G-A hg38:Y:22276426-G-A | ** | ||||||
hg19:Y:24422574-G-A hg38:Y:22276427-G-A | ** | ||||||
hg19:Y:24877164-G-A hg38:Y:22731017-G-A | g1 | ** | |||||
hg19:Y:24884195-G-T hg38:Y:22738048-G-T | g1 | ** | |||||
hg19:Y:25030388-G-T hg38:Y:22884241-G-T | g1 | ** | |||||
hg19:Y:25556073-T-C hg38:Y:23409926-T-C | P1_gr1 | ** | |||||
hg19:Y:26834652-A-G hg38:Y:24688505-A-G | P1_g2 | ** | |||||
hg19:Y:27007713-A-G hg38:Y:24861566-A-G | P1_r4 | ** | |||||
hg19:Y:27497035-A-T hg38:Y:25350888-A-T | P1_Y2 | ** | |||||
hg19:Y:27497041-C-T hg38:Y:25350894-C-T | P1_Y2 | ** | |||||
hg19:Y:28049646-G-T hg38:Y:25903499-G-T | P1_Y2 | ** | |||||
hg19:Y:28478328-A-G hg38:Y:26332181-A-G | ** | ||||||
hg19:Y:28479657-G-T hg38:Y:26333510-G-T | ** | ||||||
hg19:Y:28485900-C-A hg38:Y:26339753-C-A | ** | ||||||
hg19:Y:28510298-T-C hg38:Y:26364151-T-C | ** | ||||||
hg19:Y:28517994-T-A hg38:Y:26371847-T-A | ** | ||||||
hg19:Y:28546584-T-C hg38:Y:26400437-T-C | ** | ||||||
hg19:Y:28546934-C-CA hg38:Y:26400787-C-CA | ** | ||||||
hg19:Y:28546945-T-C hg38:Y:26400798-T-C | ** | ||||||
hg19:Y:28617646-T-C hg38:Y:26471499-T-C | ** | ||||||
hg19:Y:28631641-C-T hg38:Y:26485494-C-T | ** | ||||||
hg19:Y:28686151-A-T hg38:Y:26540004-A-T | ** | ||||||
hg19:Y:28687376-G-T hg38:Y:26541229-G-T | ** | ||||||
hg19:Y:28700535-T-C hg38:Y:26554388-T-C | ** | ||||||
hg38:Y:56756845-A-AATGGC | ** | ||||||
hg38:Y:56858213-G-T | ** | ||||||
hg38:Y:56858897-C-T | ** | ||||||
hg19:Y:2783726-C-A hg38:Y:2915685-C-A | *** | ||||||
hg19:Y:7136245-CAAAA-C hg38:Y:7268204-CAAAA-C | 14×A | *** | |||||
hg19:Y:7939736-C-A hg38:Y:8071695-C-A | *** | ||||||
hg19:Y:18996884-CTT-C,CT hg38:Y:16885004-CTT-C,CT | 13×T | *** | |||||
hg38:Y:10764575-C-CG,T | *** | ||||||
hg19:Y:21224817-G-T hg38:Y:19062931-G-T | *** | ||||||
hg19:Y:15982158-C-A hg38:Y:13870278-C-A | *** | ||||||
hg19:Y:2836377-A-G hg38:Y:2968336-A-G | *** | ||||||
hg19:Y:8379415-A-AT hg38:Y:8511374-A-AT | 9×T | *** | |||||
hg19:Y:18195154-A-T hg38:Y:16083274-A-T | Y54383 | 29×T | *** | ||||
hg19:Y:16312067-G-A hg38:Y:14200187-G-A | *** | ||||||
hg38:Y:10958321-T-C | *** | ||||||
hg19:Y:13996128-C-A hg38:Y:11875422-C-A | *** | ||||||
hg19:Y:17277448-C-A hg38:Y:15165568-C-A | *** | ||||||
hg38:Y:10943480-C-A | *** | ||||||
hg19:Y:3131151-C-A hg38:Y:3263110-C-A | 12×AGAT | *** | |||||
hg19:Y:6580510-G-T hg38:Y:6712469-G-T | *** | ||||||
hg19:Y:7078470-C-A hg38:Y:7210429-C-A | *** | ||||||
hg19:Y:7723828-G-A hg38:Y:7855787-G-A | *** | ||||||
hg38:Y:10657344-C-G | *** | ||||||
hg38:Y:10753299-C-A | *** | ||||||
hg38:Y:10801682-C-CGGAAG | *** | ||||||
hg38:Y:10980749-C-A,CGTTCC | *** | ||||||
hg38:Y:11014466-C-A | *** | ||||||
hg19:Y:13197128-A-G hg38:Y:11041452-A-G | *** | ||||||
hg19:Y:13488191-G-T hg38:Y:11332515-G-T | *** | ||||||
hg19:Y:13488198-G-T hg38:Y:11332522-G-T | *** | ||||||
hg38:Y:11660091-G-A | DYZ17 | *** | |||||
hg19:Y:14385111-T-A hg38:Y:12264407-T-A | *** | ||||||
hg19:Y:14401931-G-T hg38:Y:12281228-G-T | *** | ||||||
hg19:Y:18253185-C-T hg38:Y:16141305-C-T | *** | ||||||
hg19:Y:18635319-C-CT hg38:Y:16523439-C-CT | *** | ||||||
hg19:Y:18883227-A-T hg38:Y:16771347-A-T | *** | ||||||
hg19:Y:23848001-G-A hg38:Y:21686115-G-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 560039 | 9609187 | 7834058 | 7730634 |
Used in age calculations | 9609187 | 7834058 | 7730634 |
Counts of SNPs | 12 | 13 |
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