Tree Position

R-M269 > L23 > Z2103 > Z2106 > Z2108 > KMS67

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19)	POS-REF-ALT (hg38)	Blocks	Names	Region	McDonald BED	combBED	STR	BigY2 527684
28794008-G-A	26647861-G-A							A*
6106166-A-G	6238125-A-G							A*
6275802-G-C	6407761-G-C			IR3_Dst				A*
13695095-T-C	11539419-T-C							A*
16109720-A-G	13997840-A-G			P8_Prx				A*
20727133-T-C	18565247-T-C			P4_Prx				A*
	10627895-A-G		BY29255					A*
26117629-G-T	23971482-G-T			P1_Y1				A*
58979396-T-C	56833249-T-C							**
13695101-G-A	11539425-G-A							A*
13695081-G-T	11539405-G-T							A*
19984542-C-T	17872662-C-T			P5_Prx				A*
26011966-G-A	23865819-G-A			P1_Y1				A*
19977073-A-G	17865193-A-G			P5_Prx				A*
22237466-A-T	20075580-A-T			DYZ19				A*
26002238-G-A	23856091-G-A			P1_Y1				A*
6331681-C-T	6463640-C-T			IR3_Dst				A*
22456371-G-A	20294485-G-A			DYZ19				A*
26033418-C-A	23887271-C-A			P1_Y1				A*
23627961-G-A	21466075-G-A		Y112074		Y	Y		+
23723508-G-C	21561622-G-C		BY147128					+
16860701-A-G	14748821-A-G		Y97514		Y	Y		+
23799355-C-A	21637469-C-A		Y112344			Y		+
6733744-G-A	6865703-G-A		Y82411		Y	Y		+
16835380-A-T	14723500-A-T		ZS6183		Y	Y		+
6868199-G-A	7000158-G-A		Y82752		Y	Y		+
23989977-C-A	21843830-C-A		BY46695			Y		+
21413305-C-G	19251419-C-G		Y106420		Y	Y		+
6677780-G-C	6809739-G-C		Y82301		Y	Y		+
23989994-C-T	21843847-C-T		Y112595			Y		+
21651472-G-A	19489586-G-A		Y107120		Y	Y		+
18709290-C-CA	16597410-C-CA						10×A	+
17356044-G-A	15244164-G-A		Y98904		Y	Y		+
22272106-A-C	20110220-A-C		BY215317	DYZ19				+
22457502-A-C	20295616-A-C		BY186015	DYZ19				+
22473693-G-T	20311807-G-T		BY186017	DYZ19				+
22486741-T-G	20324855-T-G		BY30043	DYZ19				+
8861152-C-T	8993111-C-T		Y88212		Y	Y		+
22764151-C-T	20602265-C-T		Y109685		Y	Y		+
8753085-A-C	8885044-A-C		Y87909		Y	Y		+
17665282-G-A	15553402-G-A		Y99867		Y	Y		+
17240167-T-C	15128287-T-C		Y98569		Y	Y		+
22466733-T-C	20304847-T-C	FGC15236	FGC15249	DYZ19				+
22044326-T-C	19882440-T-C		Y108240		Y	Y		+
17128370-C-A	15016490-C-A		Y98261		Y	Y		+
13717691-C-A	11562015-C-A		BY89743					+
23129410-C-T	20967524-C-T		Y110718		Y	Y		+
7139865-A-G	7271824-A-G		Y83435		Y	Y		+
17982482-T-C	15870602-T-C		Y100872		Y			+
21722131-T-C	19560245-T-C		Y107319		Y	Y		+
13842091-C-A	11721385-C-A		Y89777					+
23989984-T-C	21843837-T-C		BY15188			Y		+
9054114-T-C	9216505-T-C		BY77745			Y		+
18995795-T-G	16883915-T-G		Y103298		Y	Y		+
13940157-A-C	11819451-A-C	Z16258	Z17985		Y			+
19284024-C-G	17172144-C-G		CTS10137 Z43775		Y	Y		+
20612662-G-A	18450776-G-A		BY196803	P4_Prx				+
16505855-C-T	14393975-C-T		Y96524		Y	Y		+
7053220-C-CA	7185179-C-CA	Y37731					8×A	+
18911983-C-T	16800103-C-T		Y103021		Y	Y		+
5710361-A-C	5842320-A-C		BY58822					+
7453566-AGTGT-A	7585525-AGTGT-A	Y19922		IR1_L			16×GT	+
2723379-A-G	2855338-A-G		Y81298		Y	Y		+
17426011-CCTTTTCTTTTCTTTT-C	15314131-CCTTTTCTTTTCTTTT-C						11×CTTTT	+
2833962-A-G	2965921-A-G		Y81575		Y	Y		+
21240418-T-A	19078532-T-A		BY131372		Y	Y		+
15375147-G-A	13263267-G-A		Y93652		Y	Y		+
19239050-TTATCTATC-T	17127170-TTATCTATC-T						12×TATC	+
28785062-T-G	26638915-T-G							*
23869694-A-AATGTAT	21707808-A-AATGTAT						5×ATGTAT	*
13848945-C-CGGAAT	11728239-C-CGGAAT						8×GGAAT	*
17749754-G-GCA	15637874-G-GCA							*
22226012-C-A	20064126-C-A			DYZ19				*
13452332-G-GATTCCATTCC	11296656-G-GATTCCATTCC						12×ATTCC	*
22335075-C-G	20173189-C-G			DYZ19				*
18414381-AGAAGGAAG-A	16302501-AGAAGGAAG-A			P6_Gap			15×GAAG	*
15206182-TAA-T	13094268-TAA-T						14×A	*
13489616-CC-C,CCCCGTCCT	11333940-CC-C,CCCCGTCCT							*
13818192-TGAATGGAATG-T	11697486-TGAATGGAATG-T						10×GAATG	*
22432298-G-T	20270412-G-T		BY7444	DYZ19				*
28785058-A-G	26638911-A-G							*
16809086-C-CAGATAGAT	14697206-C-CAGATAGAT						11×AGAT	*
	10876924-A-C							**
	10888669-A-G							**
	10893972-A-C							**
13271640-A-C	11115964-A-C							**
	10894726-A-T							**
13271701-G-A	11116025-G-A							**
	10860920-G-T							**
	10878210-C-T							**
	10996178-T-C							**
13249279-C-T	11093603-C-T							**
	10952884-A-T							**
	10958422-G-A							**
13454418-G-A	11298742-G-A							**
	11005165-C-T							**
	11013063-C-A		FT393658					**
	11013556-G-A							**
	10952931-A-C							**
	10952927-C-G							**
	11013585-G-C							**
	10952849-C-A							**
13195786-C-A	11040110-C-A							**
	11013593-T-C							**
	11037111-T-C							**
	10952840-C-G							**
	10949880-A-C							**
	10926696-T-TGCACTCCGAA							**
	10898306-T-A							**
	11037130-CTTCTCTCCAT-C							**
	10895647-T-A							**
	11037182-C-A							**
14656153-AC-A	12544218-AC-A							**
	11666126-T-G							**
13454427-A-G	11298751-A-G							**
14432101-G-T	12311374-G-T							**
14076700-C-A	11955994-C-A							**
14229943-A-C	12109237-A-C							**
14252437-A-T	12131731-A-T							**
14253169-G-A	12132463-G-A							**
14285717-C-A	12165011-C-A							**
14314178-A-G	12193472-A-G							**
14339367-T-C	12218662-T-C							**
14431103-G-C	12310376-G-C							**
14431104-A-T	12310377-A-T							**
14493457-G-A	12381654-G-A							**
13996078-C-T	11875372-C-T		FT133799					**
14502411-T-C	12390616-T-C							**
14550628-C-A	12438829-C-A							**
14567009-T-C	12455209-T-C							**
14571250-G-T	12459450-G-T							**
14585660-C-G	12473860-C-G							**
14585669-A-C	12473869-A-C							**
14605770-T-A	12493972-T-A							**
14718555-A-T	12606623-A-T							**
14785546-T-G	12673616-T-G							**
13999234-C-A	11878528-C-A							**
13976641-G-T	11855935-G-T							**
13454437-T-A	11298761-T-A							**
	11658670-C-G							**
13468281-T-C	11312605-T-C							**
13482089-TA-T	11326413-TA-T							**
13484555-A-C	11328879-A-C							**
13521140-C-A	11365464-C-A							**
13523563-C-T	11367887-C-T							**
13566610-C-A	11410934-C-A							**
13631550-G-T	11475874-G-T							**
13705463-T-C	11549787-T-C							**
13726105-G-T	11570429-G-T							**
	10829008-C-A							**
13976610-T-C	11855904-T-C							**
	11672780-T-A							**
13854408-G-T	11733702-G-T		FT133751					**
13856292-G-T	11735586-G-T							**
13857808-C-A	11737102-C-A							**
13883046-G-C	11762340-G-C							**
13883118-A-G	11762412-A-G							**
13919229-T-A	11798523-T-A							**
13921651-A-C	11800945-A-C							**
13946287-A-G	11825581-A-G							**
13976576-A-T	11855870-A-T							**
	10840023-A-C							**
10011188-A-C	10173579-A-C							**
	10802222-A-AATTCAGAGCT							**
6918316-C-G	7050275-C-G							**
5993790-T-C	6125749-T-C							**
6124396-A-G	6256355-A-G							**
6238666-T-TGC	6370625-T-TGC			IR3_Dst				**
6252933-C-T	6384892-C-T			IR3_Dst				**
6354005-C-A	6485964-C-A							**
6367484-A-T	6499443-A-T							**
6666369-A-G	6798328-A-G							**
6856703-A-C	6988662-A-C							**
6918312-G-C	7050271-G-C							**
6930780-T-G	7062739-T-G							**
5854857-T-C	5986816-T-C							**
6967863-G-T	7099822-G-T							**
6978108-A-T	7110067-A-T							**
7019126-C-A	7151085-C-A		Y83158					**
7043643-T-C	7175602-T-C							**
7081320-G-T	7213279-G-T							**
7094261-T-G	7226220-T-G							**
7102316-A-G	7234275-A-G							**
7201526-G-C	7333485-G-C							**
7299124-ACACATACACC-A	7431083-ACACATACACC-A							**
7377579-A-G	7509538-A-G		FT178998					**
5867227-C-A	5999186-C-A							**
5770958-T-C	5902917-T-C							**
7385841-T-A	7517800-T-A							**
5119292-A-G	5251251-A-G							**
4701376-G-T	4833335-G-T							**
4788860-G-C	4920819-G-C							**
4788879-A-C	4920838-A-C							**
4788888-G-C	4920847-G-C							**
4788920-T-C	4920879-T-C							**
4788967-T-A	4920926-T-A							**
4898528-T-A	5030487-T-A							**
4926174-T-A	5058133-T-A							**
4930471-A-T	5062430-A-T							**
5178438-C-A	5310397-C-A							**
5770946-A-T	5902905-A-T							**
5178441-T-A	5310400-T-A							**
5212028-C-T	5343987-C-T							**
5212045-T-G	5344004-T-G							**
5216454-A-T	5348413-A-T							**
5220354-G-A	5352313-G-A							**
5277901-G-A	5409860-G-A							**
5508696-C-A	5640655-C-A							**
5669800-A-C	5801759-A-C							**
5760690-C-A	5892649-C-A							**
5770925-C-A	5902884-C-A							**
7377607-C-A	7509566-C-A							**
7704891-T-C	7836850-T-C							**
	10802219-T-A							**
	10753586-T-TGACAC							**
10011251-G-T	10173642-G-T							**
10040211-AT-A	10202602-AT-A							**
	10651907-TCC-T							**
	10658225-TCCATTACATTA-T							**
	10671495-C-A							**
	10677481-C-T							**
	10687324-A-C							**
	10746869-A-G							**
	10751177-T-G							**
	10754718-T-C							**
15047945-T-C	12936036-T-C							**
	10754996-C-CGGATT							**
	10755008-A-T							**
	10755017-C-T							**
	10782877-C-G							**
	10789736-G-T							**
	10794935-A-C							**
	10802169-T-C							**
	10802188-C-T							**
	10802197-AT-A							**
	10802216-C-A							**
10011211-A-C	10173602-A-C							**
10011114-A-C	10173505-A-C							**
7709656-T-C	7841615-T-C							**
9381916-T-C	9544307-T-C							**
7723941-C-G	7855900-C-G							**
7861617-T-C	7993576-T-C							**
7897860-T-A	8029819-T-A							**
7898778-G-A	8030737-G-A		Y85294					**
7984462-A-C	8116421-A-C							**
8095272-A-G	8227231-A-G							**
8855524-A-C	8987483-A-C							**
	9056798-T-G							**
9331581-C-A	9493972-C-A							**
9499161-A-G	9661552-A-G							**
9990128-G-C	10152519-G-C							**
9508020-C-T	9670411-C-T							**
9508023-A-AAG	9670414-A-AAG							**
9678342-T-A	9840733-T-A			IR3_Prx				**
9773486-G-T	9935877-G-T							**
9773487-G-C	9935878-G-C							**
9873777-C-A	10036168-C-A							**
9887072-C-G	10049463-C-G							**
9887076-C-G	10049467-C-G							**
9887081-T-G	10049472-T-G							**
9980464-C-G	10142855-C-G							**
14806025-G-A	12694096-G-A							**
16590720-A-G	14478840-A-G							**
15128141-C-CT	13016228-C-CT							**
22995360-G-T	20833474-G-T							**
22333843-T-A	20171957-T-A			DYZ19				**
22650875-C-A	20488989-C-A							**
22659604-T-C	20497718-T-C							**
22916798-AC-A	20754912-AC-A							**
22954819-T-C	20792933-T-C							**
22995046-G-A	20833160-G-A							**
22995131-C-A	20833245-C-A							**
22995355-A-T	20833469-A-T							**
22995356-T-G	20833470-T-G							**
22995374-T-A	20833488-T-A							**
22205393-C-A	20043507-C-A							**
23004810-G-A	20842924-G-A							**
23009503-T-C	20847617-T-C							**
23059634-C-A	20897748-C-A							**
23061254-A-T	20899368-A-T							**
23065043-C-A	20903157-C-A							**
23101292-C-A	20939406-C-A							**
23181427-G-T	21019541-G-T							**
23181444-C-A	21019558-C-A							**
23181445-T-C	21019559-T-C							**
22212023-C-A	20050137-C-A							**
22166647-A-T	20004761-A-T							**
23200780-A-G	21038894-A-G							**
21482790-A-T	19320904-A-T							**
21148563-T-A	18986677-T-A							**
21148585-ATCTC-A	18986699-ATCTC-A							**
21248067-C-A	19086181-C-A							**
21263464-C-A	19101578-C-A							**
21306584-T-C	19144698-T-C							**
21371682-C-A	19209796-C-A							**
21435073-G-C	19273187-G-C							**
21457955-A-G	19296069-A-G							**
21476924-T-A	19315038-T-A							**
21534879-A-G	19372993-A-G							**
22149811-C-A	19987925-C-A							**
21588732-G-T	19426846-G-T							**
21824810-C-A	19662924-C-A							**
21850722-G-T	19688836-G-T							**
21862947-C-G	19701061-C-G							**
21932652-C-A	19770766-C-A							**
22027914-T-A	19866028-T-A							**
22122169-G-A	19960283-G-A							**
22124205-T-C	19962319-T-C							**
22124460-T-G	19962574-T-G							**
22124501-C-A	19962615-C-A							**
23199620-A-G	21037734-A-G		Y110973					**
23253254-T-C	21091368-T-C		Y111099					**
20695284-G-A	18533398-G-A			P4_Prx				**
28482990-T-G	26336843-T-G							**
27596081-G-T	25449934-G-T			P1_Y2				**
27791783-T-C	25645636-T-C			P1_Y2				**
27883199-C-T	25737052-C-T			P1_Y2				**
27936787-C-A	25790640-C-A			P1_Y2				**
27981797-C-A	25835650-C-A			P1_Y2				**
27996128-A-AAC	25849981-A-AAC			P1_Y2				**
27996142-G-T	25849995-G-T			P1_Y2				**
28027469-T-C	25881322-T-C			P1_Y2				**
28453897-A-AG	26307750-A-AG			P1_gr2				**
28482991-G-A	26336844-G-A							**
26699219-T-C	24553072-T-C			P1_g2				**
28506054-G-T	26359907-G-T							**
28534540-A-G	26388393-A-G							**
28623196-A-T	26477049-A-T							**
28649363-G-T	26503216-G-T							**
	56833303-T-A							**
	56833304-T-G							**
	56833328-C-CACCAT							**
	56833352-A-C							**
	56833363-C-A							**
	56834953-T-A							**
27585952-A-T	25439805-A-T			P1_Y2				**
26262460-T-A	24116313-T-A			P1_Y1			8×TA	**
23569050-C-T	21407164-C-T							**
25934376-A-AAG	23788229-A-AAG			P1_Y1				**
23570280-T-A	21408394-T-A							**
23779843-C-A	21617957-C-A							**
23824961-AAT-A	21663075-AAT-A							**
23849698-T-C	21687812-T-C		Y30760					**
23849699-T-C	21687813-T-C							**
24353289-T-TCC	22207142-T-TCC			P3_t1				**
24405878-C-G	22259731-C-G							**
24614270-G-C	22468123-G-C			P3_t2				**
24614289-T-A	22468142-T-A			P3_t2				**
25934408-T-A	23788261-T-A			P1_Y1				**
26142739-C-A	23996592-C-A			P1_Y1				**
25934411-G-A	23788264-G-A			P1_Y1				**
25934421-T-G	23788274-T-G			P1_Y1				**
25945017-T-A	23798870-T-A			P1_Y1				**
25945059-A-C	23798912-A-C			P1_Y1				**
26096337-GC-G	23950190-GC-G			P1_Y1				**
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20755550-A-T	18593664-A-T			P4_Prx				**
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15323492-T-A	13211610-T-A							**
16930260-G-T	14818380-G-T							**
16531069-G-C	14419189-G-C							**
16531073-G-C	14419193-G-C							**
4672191-C-A	4804150-C-A							**
16620577-G-T	14508697-G-T							**
16656770-A-G	14544890-A-G							**
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16981180-GCATTTAGAGA-G	14869300-GCATTTAGAGA-G							**
17048051-T-G	14936171-T-G							**
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17157715-C-A	15045835-C-A							**
17158994-TGAG-T	15047114-TGAG-T							**
17367732-G-C	15255852-G-C							**
16458258-A-T	14346378-A-T							**
16405469-C-A	14293589-C-A							**
17375714-G-T	15263834-G-T							**
15732140-T-G	13620260-T-G							**
15358696-T-A	13246815-T-A							**
15364566-C-A	13252686-C-A							**
15396313-A-G	13284433-A-G							**
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15400197-T-A	13288317-T-A							**
15402843-C-T	13290963-C-T							**
15495194-T-C	13383314-T-C							**
15556728-C-A	13444848-C-A							**
15731348-A-C	13619468-A-C							**
15770651-G-T	13658771-G-T							**
16320398-A-G	14208518-A-G							**
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15940305-TCAAAA-T	13828425-TCAAAA-T							**
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15969796-GA-G	13857916-GA-G							**
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16232489-G-T	14120609-G-T							**
16278423-C-A	14166543-C-A							**
16296827-T-C	14184947-T-C							**
17367775-A-T	15255895-A-T							**
17455885-A-C	15344005-A-C							**
20695248-T-G	18533362-T-G			P4_Prx				**
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19125654-C-A	17013774-C-A							**
19127678-A-C	17015798-A-C							**
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19293768-CTCAA-C	17181888-CTCAA-C							**
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19377089-A-G	17265209-A-G							**
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19815544-A-AT	17703664-A-AT			P5_Prx				**
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20614779-C-G	18452893-C-G			P4_Prx				**
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18956246-G-A	16844366-G-A							**
17544775-C-A	15432895-C-A							**
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17568291-C-A	15456411-C-A							**
17581909-C-G	15470029-C-G							**
17600477-A-C	15488597-A-C							**
17622696-C-G	15510816-C-G							**
17802190-A-G	15690310-A-G							**
17864008-C-A	15752128-C-A							**
17876293-C-A	15764413-C-A							**
17929588-A-C	15817708-A-C							**
18108571-C-A	15996691-C-A							**
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18956245-A-G	16844365-A-G							**
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4688036-A-T	4819995-A-T							**
4509434-C-T	4641393-C-T							**
4530152-G-T	4662111-G-T							**
8734222-C-CAA	8866181-C-CAA						14×A	**
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2752707-C-A	2884666-C-A							**
	10673941-T-C							**
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15252779-C-A	13140865-C-A							**
23807577-TCAA-T	21645691-TCAA-T							**
8793031-ATT-A	8924990-ATT-A						13×T	**
18263843-C-G	16151963-C-G							**
9703007-C-A	9865398-C-A			IR3_Prx				**
14549302-T-C	12437503-T-C							**
6541301-C-A	6673260-C-A							**
8314146-CTTTTTT-C	8446105-CTTTTTT-C						24×T	**
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27665358-ATAT-A	25519211-ATAT-A			P1_Y2				**
7270315-G-C	7402274-G-C							**
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18102066-C-A	15990186-C-A							**
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13485681-A-G	11330005-A-G							**
22235195-A-G	20073309-A-G			DYZ19				**
22649561-C-A	20487675-C-A							**
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21482783-A-T	19320897-A-T							**
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21132677-C-T	18970791-C-T							**
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19271586-T-G	17159706-T-G							**
18256230-CAA-C	16144350-CAA-C						12×A	**
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13457671-C-CATTTTACTCGACTTG	11301995-C-CATTTTACTCGACTTG							**
13457685-C-G	11302009-C-G							**
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13485612-A-G	11329936-A-G							**
15904131-C-A	13792251-C-A		A3397					**
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3804772-A-G	3936731-A-G							**
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16938651-G-A	14826771-G-A							**
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19271508-C-A	17159628-C-A							**
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13212567-C-A	11056891-C-A							**
26262456-C-A	24116309-C-A			P1_Y1				**
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25990668-C-T	23844521-C-T			P1_Y1				**
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13485696-C-T	11330020-C-T							**
13523464-TA-T	11367788-TA-T						9×A	**
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2948387-C-A	3080346-C-A							**
14124135-A-C	12003429-A-C							**
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13461039-A-C	11305363-A-C							**
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24636431-A-T	22490284-A-T			P3_t2				**
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7269647-A-T	7401606-A-T							**
21237230-CAAAA-C	19075344-CAAAA-C						16×A	**
7939261-C-A	8071220-C-A							**
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13485701-C-A	11330025-C-A							**
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16564350-TGATA-T	14452470-TGATA-T						11×GATA	**
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25929248-T-C	23783101-T-C			P1_Y1				**
7174334-C-A	7306293-C-A							**
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21132671-A-T	18970785-A-T							**
26730200-G-A	24584053-G-A			P1_g2				**
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25990661-A-G	23844514-A-G			P1_Y1				**
21306573-C-A	19144687-C-A							**
22489658-A-G	20327772-A-G		BY35087	DYZ19				**
2783640-C-A	2915599-C-A							**
58988374-G-A	56842227-G-A							**
58988384-C-T	56842237-C-T							**
58977263-C-A	56831116-C-A							**
23181437-G-C	21019551-G-C							**
16598963-C-A	14487083-C-A							**
9700821-G-A	9863212-G-A			IR3_Prx				**
13482068-A-T	11326392-A-T							**
21132669-C-T	18970783-C-T							**
58976826-C-A	56830679-C-A							**
26730181-T-A	24584034-T-A			P1_g2				**
15252782-C-A	13140868-C-A							**
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8379144-C-CTTCT	8511103-C-CTTCT						15×TTCT	**
17940788-CAAAT-C	15828908-CAAAT-C						7×AAAT	**
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13457679-T-C	11302003-T-C							**
13223678-T-G	11068002-T-G							**
15128141-C-T	13016228-C-T							**
19407605-TC-T	17295725-TC-T							**
27467191-A-ATATT	25321044-A-ATATT			P1_Y2			6×TATT	**
21132680-TG-T	18970794-TG-T							**
21146444-A-T	18984558-A-T							**
26699230-A-C	24553083-A-C			P1_g2			20×AC	**
18035714-G-T	15923834-G-T							**
6403572-T-G	6535531-T-G							**
7094456-G-C	7226415-G-C		Z17015					**
14373557-CAAT-C	12252853-CAAT-C						6×AAT	**
14585751-C-G	12473951-C-G		CTS2952					**
19318261-C-A	17206381-C-A	S2555	Y11317					**
7269656-C-T	7401615-C-T							**
18707782-G-GTA	16595902-G-GTA							**
26344215-G-T	24198068-G-T			P1_Y1				**
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	10683117-G-C							**
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15882064-G-A	13770184-G-A							**
16545411-C-A	14433531-C-A							**
18959201-C-G	16847321-C-G							**
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28814903-G-A	26668756-G-A							**
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17802166-TAAAA-T	15690286-TAAAA-T						30×A	**
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	10858490-C-T							**
	10683113-C-A							**
	11004412-T-TA							**
13898754-GTTTTTTTTT-G	11778048-GTTTTTTTTT-G						26×T	**
14580841-CA-C	12469041-CA-C						9×A	**
16598645-C-A	14486765-C-A							**
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17152735-C-A	15040855-C-A							**
17118395-CTTTT-C	15006515-CTTTT-C						16×T	**
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19143125-ATT-A	17031245-ATT-A						17×T	**
23831289-C-T	21669403-C-T							**
3696433-C-A	3828392-C-A							**
21306589-C-A	19144703-C-A							**
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21241758-ATT-A	19079872-ATT-A						14×T	**
20434792-A-T	18272906-A-T			P5_Dst				**
26415669-T-C	24269522-T-C			P1_Y1				**
	11004401-A-C							**
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4930563-C-A	5062522-C-A							**
	10755013-G-T							**
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	10691078-A-G							**
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	10691095-C-CTGAAATTCAT							**
15732756-C-A	13620876-C-A							**
22963812-C-A	20801926-C-A							**
7253904-C-A	7385863-C-A							**
17466497-C-A	15354617-C-A							**
13223351-T-G	11067675-T-G							**
7167004-C-A	7298963-C-A							**
27952165-A-T	25806018-A-T			P1_Y2				**
6265035-CACACA-C	6396994-CACACA-C			IR3_Dst				**
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7224339-C-A	7356298-C-A							**
20884102-A-AG	18722216-A-AG			P4_Dst				**
16981269-C-A	14869389-C-A							**
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28537148-C-A	26391001-C-A							**
10011207-G-T	10173598-G-T							**
26080940-A-G	23934793-A-G			P1_Y1				**
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5449872-G-T	5581831-G-T							**
16054785-C-A	13942905-C-A							**
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14227603-C-A	12106897-C-A							**
15671137-CTT-C	13559257-CTT-C						11×T	**
13468275-A-C	11312599-A-C							**
9852715-C-CAA	10015106-C-CAA						12×A	**
9990119-T-C	10152510-T-C							**
9830667-C-A	9993058-C-A							**
7423897-C-A	7555856-C-A							**
13223358-A-G	11067682-A-G							**
17633686-CAAAA-C	15521806-CAAAA-C						17×A	**
13317857-C-A	11162181-C-A							**
9700809-T-A	9863200-T-A			IR3_Prx				**
8720562-C-A	8852521-C-A		FGC48761					**
14255105-C-A	12134399-C-A		FT133858					**
27971709-T-G	25825562-T-G			P1_Y2				**
24841397-C-T	22695250-C-T			IR1_R				**
28687424-C-A	26541277-C-A							**
27936764-CAAAA-C	25790617-CAAAA-C			P1_Y2			15×A	**
3599010-G-A	3730969-G-A							**
2973187-G-T	3105146-G-T							**
3051378-T-C	3183337-T-C							**
3086217-C-A	3218176-C-A							**
3086295-C-A	3218254-C-A							**
3130917-A-G	3262876-A-G							**
3341620-G-A	3473579-G-A							**
3547194-C-A	3679153-C-A							**
3598892-G-T	3730851-G-T							**
3641092-CTCTTTCTTTCTTTCTTTCTT-C	3773051-CTCTTTCTTTCTTTCTTTCTT-C						13×TCTT	**
2708316-G-T	2840275-G-T							**
3742033-T-G	3873992-T-G							**
4133847-G-T	4265806-G-T							**
4200969-C-A	4332928-C-A							**
4213086-C-T	4345045-C-T							**
4215929-G-T	4347888-G-T							**
4240069-G-GT	4372028-G-GT						9×T	**
4262332-GA-G	4394291-GA-G						8×A	**
4469932-A-G	4601891-A-G							**
2972665-G-T	3104624-G-T							**
2649579-G-C	2781538-G-C							**
7188382-C-A	7320341-C-A							**
3330368-C-T	3462327-C-T							**
	10880285-T-G							**
2649608-T-C	2781567-T-C							**
	11014601-G-T							**
6244196-T-G	6376155-T-G			IR3_Dst				**
24432836-TC-T	22286689-TC-T							**
13861101-C-A	11740395-C-A							**
14743482-C-A	12631551-C-A							**
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7111851-C-A	7243810-C-A							**
	10893769-C-CTCCATTCCAT							**
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17362708-C-A	15250828-C-A							**
2649578-G-A	2781537-G-A							**
17946946-GAC-G	15835066-GAC-G							**
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22855285-G-T	20693399-G-T							**
14696905-A-G	12584971-A-G							**
8043177-C-A	8175136-C-A							**
13441479-G-GC	11285803-G-GC							**
15252788-C-A	13140874-C-A							**
18707176-C-A	16595296-C-A							**
	56835855-A-C							**
16539697-C-A	14427817-C-A							**
14727343-A-T	12615411-A-T							**
26730194-G-A	24584047-G-A			P1_g2				**
21148581-G-A	18986695-G-A							**
15491878-T-A	13379998-T-A							**
26228718-A-C	24082571-A-C			P1_Y1				**
6177479-G-T	6309438-G-T			IR3_Dst				**
9700803-ATG-A	9863194-ATG-A			IR3_Prx				**
	56728167-G-A							**
6179628-A-C	6311587-A-C			IR3_Dst				**
14286051-C-A	12165345-C-A							**
14776986-A-G	12665055-A-G							**
21979994-T-C	19818108-T-C							**
	10943763-G-T							**
13881387-C-A	11760681-C-A							**
23098815-TCAAAA-T	20936929-TCAAAA-T							**
	10970842-C-A							**
7287974-CTT-C	7419933-CTT-C						12×T	**
14776977-T-A	12665046-T-A							**
9700812-C-A	9863203-C-A			IR3_Prx				**
15495193-C-A	13383313-C-A							**
14143994-C-A	12023288-C-A							**
	11643648-T-G							**
20440398-G-GTTA	18278512-G-GTTA			P5_Dst				**
13457652-A-T	11301976-A-T							**
20326039-A-C	18164153-A-C			P5_Dst				**
26010319-G-T	23864172-G-T			P1_Y1				**
	11022100-C-T							**
9499188-G-A	9661579-G-A							**
	10668357-T-G							**
17802165-G-A	15690285-G-A							**
27971712-C-A	25825565-C-A			P1_Y2				**
17821863-C-A	15709983-C-A							**
16430858-A-C	14318978-A-C							**
5824050-G-GGA	5956009-G-GGA						10×GA	**
15128140-A-T	13016227-A-T							**
14568318-C-A	12456518-C-A							**
13484736-C-A	11329060-C-A							**
14776980-C-T	12665049-C-T							**
	56728152-G-A							**
28463775-C-A	26317628-C-A							**
7994240-C-A	8126199-C-A							**
	11022127-A-C							**
24353301-C-CG	22207154-C-CG			P3_t1				**
	11022133-T-G							**
	11022147-A-C							**
13485729-A-G	11330053-A-G							**
	11022168-C-T							**
14949003-C-A	12837077-C-A							**
21911210-C-A	19749324-C-A							**
15928722-G-T	13816842-G-T							**
28027425-T-TA	25881278-T-TA			P1_Y2				**
16703359-C-T	14591479-C-T		Y31840					**
26010374-G-T	23864227-G-T			P1_Y1				**
2960062-C-A	3092021-C-A						17×A	***
8288889-C-A	8420848-C-A							***
13489529-C-T	11333853-C-T							***
6402034-C-T	6533993-C-T							***
13472168-C-A,T	11316492-C-A,T							***
6490884-A-G	6622843-A-G		FT307612					***
7126567-G-T	7258526-G-T		Y83403					***
21146266-A-T	18984380-A-T							***
2783726-C-A	2915685-C-A							***
15477291-CAAAAA-C	13365411-CAAAAA-C						18×A	***
22537004-C-A	20375118-C-A							***
13467785-C-A	11312109-C-A							***
15048482-A-G	12936573-A-G							***
6792628-CAA-C	6924587-CAA-C						18×A	***
21838971-G-A	19677085-G-A						20×A	***
	10943075-T-C							***
	10943116-T-C							***
19187445-A-C	17075565-A-C							***
	10943119-T-C							***
58975578-G-A	56829431-G-A							***
18615963-A-T	16504083-A-T							***
58997101-G-A	56850954-G-A							***
18615960-G-T	16504080-G-T		M12053					***
6698874-A-T	6830833-A-T							***
18565060-TCAA-T	16453180-TCAA-T							***
21362542-G-A	19200656-G-A						13×A	***
	10926617-C-A,G							***
4229306-ATATATGACCAGTTTT-A	4361265-ATATATGACCAGTTTT-A							***
	10776513-A-ACTCCTCTCCC							***
8479399-CT-C,CTT	8611358-CT-C,CTT						18×T	***
13452070-C-A	11296394-C-A							***
	10821852-CGTTCA-C,CATTCC							***
22974116-CAAA-C,CAA	20812230-CAAA-C,CAA						24×A	***
58973851-A-C	56827704-A-C							***
13869303-T-A	11748597-T-A							***
	10935583-A-ACTGCG							***
13448881-T-C	11293205-T-C							***
7126548-G-T	7258507-G-T							***
24483822-G-GT	22337675-G-GT						10×T	***
17895175-ATTT-A	15783295-ATTT-A						21×T	***
	10821934-T-C							***
14080035-GATATAT-G,GATAT	11959329-GATATAT-G,GATAT						29×AT	***
7717737-CTTCT-C	7849696-CTTCT-C						13×TTCT	***
	10760417-C-G							***
17675541-G-A	15563661-G-A						20×A	***
	10673862-C-CG							***
2840099-CAAAAA-C	2972058-CAAAAA-C						20×A	***
8806570-C-A	8938529-C-A							***
19330260-G-T	17218380-G-T							***
	56831889-A-G							***
16292012-C-A	14180132-C-A							***
	10776509-T-A		BY83809					***
	10669521-T-A							***
15604351-T-A	13492471-T-A							***
13460976-T-C	11305300-T-C							***
10029507-C-A	10191898-C-A							***
6226044-C-CTTCT,CTTCTTTCT	6358003-C-CTTCT,CTTCTTTCT			IR3_Dst			13×TTCT	***
9127506-CTTTT-C	9289897-CTTTT-C						22×T	***
	10764636-A-G							***
21996222-G-T	19834336-G-T							***
2834869-CTTT-C,CTT	2966828-CTTT-C,CTT						15×T	***
8422869-CAAAA-C,CAAA	8554828-CAAAA-C,CAAA						17×A	***
	56836638-A-T							***
14310459-C-A	12189753-C-A							***
21227397-TG-T	19065511-TG-T							***
9730224-T-A	9892615-T-A			IR3_Prx				***
16327271-ATT-A	14215391-ATT-A						14×T	***
22173954-GAA-G	20012068-GAA-G						16×A	***
19172834-G-T	17060954-G-T							***
28796981-G-A	26650834-G-A							***
18038647-C-A	15926767-C-A							***
	10800493-T-C							***
	10821867-C-A,T							***
	10794759-T-C							***
14391874-TAAA-T,TAA	12271170-TAAA-T,TAA						15×A	***
14096618-TAAA-T	11975912-TAAA-T						17×A	***
17584157-GA-G,TA	15472277-GA-G,TA							***
13489828-C-G	11334152-C-G							***
9945886-T-A	10108277-T-A							***
	56826005-G-T							***
14774280-TTG-T	12662349-TTG-T							***
23274739-C-T	21112853-C-T						18×T	***
19007712-G-A	16895832-G-A							***
17760347-CTT-C,CT	15648467-CTT-C,CT						14×T	***
14916890-CAAA-C,CAA	12804957-CAAA-C,CAA						15×A	***
	10760381-A-AGTTGA,C							***
22919356-C-T	20757470-C-T							***
7043578-G-T	7175537-G-T							***
7126564-A-T	7258523-A-T							***
8893036-ATT-A	9024995-ATT-A						13×T	***
16519295-T-G	14407415-T-G							***
22829644-C-A	20667758-C-A						18×A	***
15479982-G-T	13368102-G-T							***
22430276-T-A	20268390-T-A			DYZ19				***
16406883-C-T	14295003-C-T							***
17707375-TC-T	15595495-TC-T							***
22189251-AGG-A	20027365-AGG-A							***
	10775978-T-G							***
22536020-G-C	20374134-G-C							***
13421185-T-C	11265509-T-C							***
	10999859-G-C,T							***
22737231-CAAAAA-C,CAAA	20575345-CAAAAA-C,CAAA						18×A	***
19565634-TAA-T	17453754-TAA-T						14×A	***
2658789-TAA-T	2790748-TAA-T						13×A	***
23981934-CTTT-C	21835787-CTTT-C						14×T	***
19479688-A-AGT	17367808-A-AGT						20×GT	***
9398111-C-A	9560502-C-A							***
21608305-G-T	19446419-G-T							***
14784735-G-T	12672805-G-T							***
	10949893-C-A							***
17678645-TTTG-T	15566765-TTTG-T							***
9013249-C-A	9175640-C-A							***
23633400-A-G	21471514-A-G							***
15882073-TC-A	13770193-TC-A							***
28790628-A-T	26644481-A-T							***
13489117-C-T	11333441-C-T							***
21691070-A-T	19529184-A-T							***
17189351-C-A	15077471-C-A							***
	10807280-T-C							***
	10657388-T-C							***
21662148-TAA-T,TA	19500262-TAA-T,TA						14×A	***
7760218-A-G	7892177-A-G							***
15479963-TG-G,T	13368083-TG-G,T							***
8746989-C-A	8878948-C-A						14×A	***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

	All	McDonald	YFull
Kit: 527684	9697423	7890053	7775220
Used in age calculations	9697423	7890053	7775220
Counts of SNPs		29	32

Variant counts last updated 2022-07-30 03:29:55.

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