O'Malley
BigY2: 357319MDKA Birth:
IrelandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 357319 |
|---|---|---|---|---|---|---|---|
| hg19:Y:20736920-C-T hg38:Y:18575034-C-T | P4_Prx | A* | |||||
| hg19:Y:8070115-G-A hg38:Y:8202074-G-A | Y10955 FGC7943 ZS4957 | Y | Y | + | |||
| hg19:Y:20001377-T-C hg38:Y:17889497-T-C | P5_Prx | ** | |||||
| hg19:Y:18872248-CTCTTTCTTTCTT-C hg38:Y:16760368-CTCTTTCTTTCTT-C | 12×TCTT | ** | |||||
| hg19:Y:16860770-AAAAG-A hg38:Y:14748890-AAAAG-A | ** | ||||||
| hg19:Y:18172947-A-G hg38:Y:16061067-A-G | CTS8742 PF3776 | ** | |||||
| hg19:Y:13846803-C-A hg38:Y:11726097-C-A | FT328702 | DYZ17 | ** | ||||
| hg19:Y:15792694-C-T hg38:Y:13680814-C-T | FT336398 | ** | |||||
| hg19:Y:16437519-AAAAT-A hg38:Y:14325639-AAAAT-A | 6×AAAT | ** | |||||
| hg19:Y:20989152-CACAT-C hg38:Y:18827266-CACAT-C | P4_Dst | ** | |||||
| hg19:Y:13474456-C-G hg38:Y:11318780-C-G | ** | ||||||
| hg38:Y:11030124-C-G | ** | ||||||
| hg38:Y:10914671-G-T | ** | ||||||
| hg19:Y:13457766-C-G hg38:Y:11302090-C-G | ** | ||||||
| hg38:Y:10930977-C-A | ** | ||||||
| hg38:Y:10747028-C-T | ** | ||||||
| hg19:Y:14432408-C-A hg38:Y:12311681-C-A | ** | ||||||
| hg19:Y:16881566-C-A hg38:Y:14769686-C-A | ** | ||||||
| hg38:Y:10693312-A-G | ** | ||||||
| hg38:Y:10992273-C-T | ** | ||||||
| hg38:Y:10755334-C-A | ** | ||||||
| hg38:Y:10880369-C-A | ** | ||||||
| hg38:Y:10760760-C-A | ** | ||||||
| hg38:Y:10776214-C-G | ** | ||||||
| hg38:Y:11013090-A-C | ** | ||||||
| hg38:Y:10974765-T-G | ** | ||||||
| hg38:Y:10786142-CAACTT-C | ** | ||||||
| hg38:Y:10786153-A-C | ** | ||||||
| hg38:Y:10990130-A-G | ** | ||||||
| hg38:Y:10990135-CCAT-C | ** | ||||||
| hg38:Y:10990145-C-T | ** | ||||||
| hg38:Y:10990147-A-G | ** | ||||||
| hg38:Y:10964511-G-C | ** | ||||||
| hg38:Y:10909705-C-A | ** | ||||||
| hg38:Y:10943360-C-G | ** | ||||||
| hg38:Y:10770780-A-T | ** | ||||||
| hg38:Y:10770790-A-T | ** | ||||||
| hg19:Y:25931652-T-A hg38:Y:23785505-T-A | P1_Y1 | 8×A | ** | ||||
| hg38:Y:10859968-T-C | ** | ||||||
| hg19:Y:9980678-C-A hg38:Y:10143069-C-A | ** | ||||||
| hg19:Y:6402702-A-T hg38:Y:6534661-A-T | ** | ||||||
| hg38:Y:10747018-C-A | ** | ||||||
| hg38:Y:10669091-T-G | ** | ||||||
| hg38:Y:10669102-T-A | ** | ||||||
| hg38:Y:10944625-C-A | ** | ||||||
| hg38:Y:10797699-C-T | ** | ||||||
| hg38:Y:10797702-C-T | ** | ||||||
| hg38:Y:10744476-T-CCAAAC | ** | ||||||
| hg38:Y:10747118-T-G | ** | ||||||
| hg19:Y:17371009-A-C hg38:Y:15259129-A-C | ** | ||||||
| hg38:Y:10914678-A-G | ** | ||||||
| hg38:Y:10914713-G-T | ** | ||||||
| hg19:Y:7829020-C-A hg38:Y:7960979-C-A | ** | ||||||
| hg19:Y:8712145-C-A hg38:Y:8844104-C-A | ** | ||||||
| hg19:Y:13719588-A-T hg38:Y:11563912-A-T | DYZ17 | ** | |||||
| hg38:Y:10955415-C-G | ** | ||||||
| hg38:Y:10788499-G-T | ** | ||||||
| hg19:Y:17088878-A-C hg38:Y:14976998-A-C | ** | ||||||
| hg19:Y:5264296-G-T hg38:Y:5396255-G-T | ** | ||||||
| hg38:Y:10648104-T-C | ** | ||||||
| hg19:Y:9607712-TG-T hg38:Y:9770103-TG-T | IR3_Prx | ** | |||||
| hg38:Y:10989440-C-T | ** | ||||||
| hg38:Y:10989445-C-G | ** | ||||||
| hg19:Y:19900072-T-A hg38:Y:17788192-T-A | P5_Prx | ** | |||||
| hg38:Y:10950492-C-T | ** | ||||||
| hg38:Y:10914744-C-G | ** | ||||||
| hg19:Y:5923732-C-A hg38:Y:6055691-C-A | ** | ||||||
| hg38:Y:10808217-A-T | ** | ||||||
| hg19:Y:25998908-T-TA hg38:Y:23852761-T-TA | P1_Y1 | ** | |||||
| hg19:Y:3341270-C-A hg38:Y:3473229-C-A | ** | ||||||
| hg19:Y:22164547-CAAAAAAA-C hg38:Y:20002661-CAAAAAAA-C | 19×A | ** | |||||
| hg38:Y:10909697-T-A | ** | ||||||
| hg19:Y:9537707-TG-T hg38:Y:9700098-TG-T | IR3_Prx | ** | |||||
| hg38:Y:10955420-A-C | ** | ||||||
| hg38:Y:56845357-T-A | ** | ||||||
| hg19:Y:28768603-C-A hg38:Y:26622456-C-A | ** | ||||||
| hg19:Y:21922102-AAG-A hg38:Y:19760216-AAG-A | ** | ||||||
| hg19:Y:24241204-AC-A hg38:Y:22095057-AC-A | P3_b1 | ** | |||||
| hg38:Y:10658139-C-T | ** | ||||||
| hg38:Y:10658142-T-C | ** | ||||||
| hg19:Y:22056371-C-A hg38:Y:19894485-C-A | ** | ||||||
| hg19:Y:14606513-C-A hg38:Y:12494715-C-A | ** | ||||||
| hg19:Y:2970114-C-A hg38:Y:3102073-C-A | ** | ||||||
| hg38:Y:10785833-T-C | ** | ||||||
| hg19:Y:3836880-C-A hg38:Y:3968839-C-A | ** | ||||||
| hg19:Y:22488994-C-A hg38:Y:20327108-C-A | DYZ19 | ** | |||||
| hg38:Y:10881765-C-A | ** | ||||||
| hg19:Y:17492077-T-C hg38:Y:15380197-T-C | ** | ||||||
| hg38:Y:10983896-ATTCCG-A | ** | ||||||
| hg19:Y:13475499-T-A hg38:Y:11319823-T-A | ** | ||||||
| hg38:Y:10658117-C-CTTTCA | ** | ||||||
| hg38:Y:11005443-C-T | ** | ||||||
| hg38:Y:11005452-C-G | ** | ||||||
| hg38:Y:10990112-A-G | ** | ||||||
| hg38:Y:10955417-A-T | ** | ||||||
| hg38:Y:10980756-T-C | ** | ||||||
| hg19:Y:28818915-A-T hg38:Y:26672768-A-T | ** | ||||||
| hg19:Y:19079026-C-A hg38:Y:16967146-C-A | ** | ||||||
| hg38:Y:10930193-T-C | ** | ||||||
| hg19:Y:17466768-G-GAA hg38:Y:15354888-G-GAA | 18×A | ** | |||||
| hg19:Y:15764034-C-A hg38:Y:13652154-C-A | ** | ||||||
| hg19:Y:7335713-CAAAA-C hg38:Y:7467672-CAAAA-C | 15×A | ** | |||||
| hg38:Y:11005445-T-A | ** | ||||||
| hg38:Y:11005547-C-T | ** | ||||||
| hg38:Y:10778967-A-G | ** | ||||||
| hg19:Y:7139182-C-A hg38:Y:7271141-C-A | ** | ||||||
| hg38:Y:10870810-A-T | ** | ||||||
| hg19:Y:28566327-C-A hg38:Y:26420180-C-A | ** | ||||||
| hg38:Y:10669099-A-C | ** | ||||||
| hg38:Y:10669112-T-A | ** | ||||||
| hg38:Y:10983944-C-G | ** | ||||||
| hg38:Y:10944566-C-G | ** | ||||||
| hg38:Y:10943365-A-C | ** | ||||||
| hg38:Y:10943370-C-T | ** | ||||||
| hg38:Y:10943371-C-T | ** | ||||||
| hg38:Y2:31144-C-A | ** | ||||||
| hg38:Y:10836549-C-T | ** | ||||||
| hg19:Y:14074015-C-A hg38:Y:11953309-C-A | ** | ||||||
| hg19:Y:19586696-T-TA hg38:Y:17474816-T-TA | P5_Prx | ** | |||||
| hg38:Y:10785836-C-A | ** | ||||||
| hg19:Y:9333967-C-A hg38:Y:9496358-C-A | ** | ||||||
| hg19:Y:16437503-G-T hg38:Y:14325623-G-T | ** | ||||||
| hg19:Y:5412021-C-A hg38:Y:5543980-C-A | ** | ||||||
| hg19:Y:16305896-G-C hg38:Y:14194016-G-C | ** | ||||||
| hg38:Y:10658085-C-G | ** | ||||||
| hg38:Y:10789799-T-C | ** | ||||||
| hg19:Y:16931518-G-T hg38:Y:14819638-G-T | ** | ||||||
| hg19:Y:13197876-C-A hg38:Y:11042200-C-A | ** | ||||||
| hg19:Y:3347730-C-A hg38:Y:3479689-C-A | ** | ||||||
| hg19:Y:3933158-C-A hg38:Y:4065117-C-A | ** | ||||||
| hg38:Y:56845539-G-T | ** | ||||||
| hg38:Y:10858869-C-A | ** | ||||||
| hg19:Y:15542123-A-G hg38:Y:13430243-A-G | ** | ||||||
| hg38:Y:10669114-A-T | ** | ||||||
| hg19:Y:16430096-C-A hg38:Y:14318216-C-A | ** | ||||||
| hg19:Y:14067032-C-A hg38:Y:11946326-C-A | ** | ||||||
| hg19:Y:28818276-T-A hg38:Y:26672129-T-A | ** | ||||||
| hg38:Y:10982560-C-G | ** | ||||||
| hg38:Y:10950888-C-T | ** | ||||||
| hg19:Y:3078328-C-A hg38:Y:3210287-C-A | ** | ||||||
| hg19:Y:18948128-C-A hg38:Y:16836248-C-A | ** | ||||||
| hg19:Y:2693450-C-A hg38:Y:2825409-C-A | ** | ||||||
| hg19:Y:2708481-A-C hg38:Y:2840440-A-C | ** | ||||||
| hg19:Y:2814958-C-A hg38:Y:2946917-C-A | ** | ||||||
| hg19:Y:2898149-C-T hg38:Y:3030108-C-T | ** | ||||||
| hg19:Y:3005174-G-T hg38:Y:3137133-G-T | ** | ||||||
| hg19:Y:3011505-T-G hg38:Y:3143464-T-G | ** | ||||||
| hg19:Y:3074910-C-A hg38:Y:3206869-C-A | ** | ||||||
| hg19:Y:3154165-C-G hg38:Y:3286124-C-G | ** | ||||||
| hg19:Y:3342052-G-T hg38:Y:3474011-G-T | ** | ||||||
| hg19:Y:3347709-C-A hg38:Y:3479668-C-A | ** | ||||||
| hg19:Y:3359587-A-G hg38:Y:3491546-A-G | ** | ||||||
| hg19:Y:3389625-A-G hg38:Y:3521584-A-G | ** | ||||||
| hg19:Y:3468929-C-A hg38:Y:3600888-C-A | FT271623 | ** | |||||
| hg19:Y:3565557-G-T hg38:Y:3697516-G-T | ** | ||||||
| hg19:Y:3619221-AT-A hg38:Y:3751180-AT-A | 8×T | ** | |||||
| hg19:Y:3695959-C-A hg38:Y:3827918-C-A | ** | ||||||
| hg19:Y:3925577-C-A hg38:Y:4057536-C-A | ** | ||||||
| hg19:Y:4077633-G-T hg38:Y:4209592-G-T | ** | ||||||
| hg19:Y:4079063-A-C hg38:Y:4211022-A-C | ** | ||||||
| hg19:Y:4120358-C-A hg38:Y:4252317-C-A | ** | ||||||
| hg19:Y:4123584-A-G hg38:Y:4255543-A-G | ** | ||||||
| hg19:Y:4145456-C-A hg38:Y:4277415-C-A | ** | ||||||
| hg19:Y:4213144-A-T hg38:Y:4345103-A-T | ** | ||||||
| hg19:Y:4462049-G-T hg38:Y:4594008-G-T | ** | ||||||
| hg19:Y:4491032-C-A hg38:Y:4622991-C-A | ** | ||||||
| hg19:Y:4552719-T-A hg38:Y:4684678-T-A | ** | ||||||
| hg19:Y:4555357-G-T hg38:Y:4687316-G-T | ** | ||||||
| hg19:Y:4671564-C-A hg38:Y:4803523-C-A | ** | ||||||
| hg19:Y:4855840-G-T hg38:Y:4987799-G-T | ** | ||||||
| hg19:Y:4870780-C-A hg38:Y:5002739-C-A | ** | ||||||
| hg19:Y:4920178-T-G hg38:Y:5052137-T-G | ** | ||||||
| hg19:Y:4929305-C-A hg38:Y:5061264-C-A | ** | ||||||
| hg19:Y:5091375-G-T hg38:Y:5223334-G-T | ** | ||||||
| hg19:Y:5303231-G-T hg38:Y:5435190-G-T | ** | ||||||
| hg19:Y:5308086-G-T hg38:Y:5440045-G-T | ** | ||||||
| hg19:Y:5367770-C-A hg38:Y:5499729-C-A | ** | ||||||
| hg19:Y:5493073-C-A hg38:Y:5625032-C-A | ** | ||||||
| hg19:Y:5606185-A-T hg38:Y:5738144-A-T | ** | ||||||
| hg19:Y:5684727-C-A hg38:Y:5816686-C-A | ** | ||||||
| hg19:Y:5691070-T-A hg38:Y:5823029-T-A | ** | ||||||
| hg19:Y:5695725-C-A hg38:Y:5827684-C-A | ** | ||||||
| hg19:Y:5814313-C-T hg38:Y:5946272-C-T | ** | ||||||
| hg19:Y:5828949-T-C hg38:Y:5960908-T-C | ** | ||||||
| hg19:Y:5863694-G-T hg38:Y:5995653-G-T | ** | ||||||
| hg19:Y:5871856-C-A hg38:Y:6003815-C-A | ** | ||||||
| hg19:Y:6037338-C-G hg38:Y:6169297-C-G | ** | ||||||
| hg19:Y:6221600-A-T hg38:Y:6353559-A-T | IR3_Dst | ** | |||||
| hg19:Y:6222682-A-C hg38:Y:6354641-A-C | IR3_Dst | ** | |||||
| hg19:Y:6245967-A-C hg38:Y:6377926-A-C | IR3_Dst | ** | |||||
| hg19:Y:6245987-T-G hg38:Y:6377946-T-G | IR3_Dst | ** | |||||
| hg19:Y:6245996-T-G hg38:Y:6377955-T-G | IR3_Dst | ** | |||||
| hg19:Y:6246986-T-A hg38:Y:6378945-T-A | IR3_Dst | ** | |||||
| hg19:Y:6252863-A-AT hg38:Y:6384822-A-AT | IR3_Dst | ** | |||||
| hg19:Y:6271450-C-A hg38:Y:6403409-C-A | IR3_Dst | ** | |||||
| hg19:Y:6271511-C-A hg38:Y:6403470-C-A | IR3_Dst | ** | |||||
| hg19:Y:6279382-A-T hg38:Y:6411341-A-T | IR3_Dst | ** | |||||
| hg19:Y:6492544-T-TAG hg38:Y:6624503-T-TAG | ** | ||||||
| hg19:Y:6510334-T-A hg38:Y:6642293-T-A | ** | ||||||
| hg19:Y:7044100-G-T hg38:Y:7176059-G-T | ** | ||||||
| hg19:Y:7084420-C-A hg38:Y:7216379-C-A | ** | ||||||
| hg19:Y:7140643-C-A hg38:Y:7272602-C-A | ** | ||||||
| hg19:Y:7201988-C-A hg38:Y:7333947-C-A | ** | ||||||
| hg19:Y:7253661-C-A hg38:Y:7385620-C-A | ** | ||||||
| hg19:Y:7256088-G-T hg38:Y:7388047-G-T | ** | ||||||
| hg19:Y:7303387-G-A hg38:Y:7435346-G-A | ** | ||||||
| hg19:Y:7332868-C-G hg38:Y:7464827-C-G | ** | ||||||
| hg19:Y:7342225-G-T hg38:Y:7474184-G-T | ** | ||||||
| hg19:Y:7348723-G-A hg38:Y:7480682-G-A | ** | ||||||
| hg19:Y:7420656-C-A hg38:Y:7552615-C-A | ** | ||||||
| hg19:Y:7430544-G-T hg38:Y:7562503-G-T | ** | ||||||
| hg19:Y:7755168-C-A hg38:Y:7887127-C-A | ** | ||||||
| hg19:Y:8020221-C-CAA hg38:Y:8152180-C-CAA | 22×A | ** | |||||
| hg19:Y:8167026-A-C hg38:Y:8298985-A-C | ** | ||||||
| hg19:Y:9307460-T-A hg38:Y:9469851-T-A | ** | ||||||
| hg19:Y:9307478-T-A hg38:Y:9469869-T-A | ** | ||||||
| hg19:Y:9427971-C-T hg38:Y:9590362-C-T | ** | ||||||
| hg19:Y:9940098-A-C hg38:Y:10102489-A-C | ** | ||||||
| hg19:Y:10032855-C-G hg38:Y:10195246-C-G | ** | ||||||
| hg19:Y:10060725-C-A hg38:Y:10223116-C-A | ** | ||||||
| hg38:Y:10652469-T-A | ** | ||||||
| hg38:Y:10656657-C-A | ** | ||||||
| hg38:Y:10667472-C-A | ** | ||||||
| hg38:Y:10669086-T-C | ** | ||||||
| hg38:Y:10669323-CATCCCGTTTCATTCCAGTTCCATTCG-C | ** | ||||||
| hg38:Y:10672836-C-A | ** | ||||||
| hg38:Y:10672944-C-A | ** | ||||||
| hg38:Y:10686293-T-A | ** | ||||||
| hg38:Y:10687100-T-G | ** | ||||||
| hg38:Y:10746983-C-G | ** | ||||||
| hg38:Y:10756064-T-A | ** | ||||||
| hg38:Y:10756077-C-A | ** | ||||||
| hg38:Y:10756079-C-T | ** | ||||||
| hg38:Y:10756087-C-A | ** | ||||||
| hg38:Y:10760728-C-G | ** | ||||||
| hg38:Y:10760752-C-G | ** | ||||||
| hg38:Y:10760975-CTCCAGTCCAG-C | ** | ||||||
| hg38:Y:10772680-CCAATG-C | ** | ||||||
| hg38:Y:10778968-T-A | ** | ||||||
| hg38:Y:10778982-A-G | ** | ||||||
| hg38:Y:10778998-C-T | ** | ||||||
| hg38:Y:10779005-C-CG | ** | ||||||
| hg38:Y:10779009-TC-T | ** | ||||||
| hg38:Y:10785837-A-T | ** | ||||||
| hg38:Y:10785849-T-C | ** | ||||||
| hg38:Y:10793332-C-T | ** | ||||||
| hg38:Y:10797697-C-T | ** | ||||||
| hg38:Y:10798535-C-A | ** | ||||||
| hg38:Y:10799445-T-TTCCAA | ** | ||||||
| hg38:Y:10806247-A-C | ** | ||||||
| hg38:Y:10814547-C-A | ** | ||||||
| hg38:Y:10814969-C-A | ** | ||||||
| hg38:Y:10836546-T-G | ** | ||||||
| hg38:Y:10858867-T-A | ** | ||||||
| hg38:Y:10859970-C-G | ** | ||||||
| hg38:Y:10865552-G-T | ** | ||||||
| hg38:Y:10869839-G-T | ** | ||||||
| hg38:Y:10880357-C-CACTCT | ** | ||||||
| hg38:Y:10882738-C-A | ** | ||||||
| hg38:Y:10899982-ATT-A | ** | ||||||
| hg38:Y:10914719-A-T | ** | ||||||
| hg38:Y:10914738-T-C | ** | ||||||
| hg38:Y:10919726-A-T | ** | ||||||
| hg38:Y:10925664-C-A | ** | ||||||
| hg38:Y:10930201-C-CACAAA | ** | ||||||
| hg38:Y:10930211-T-C | ** | ||||||
| hg38:Y:10930229-C-G | ** | ||||||
| hg38:Y:10941567-C-A | ** | ||||||
| hg38:Y:10944611-T-C | ** | ||||||
| hg38:Y:10952682-C-T | ** | ||||||
| hg38:Y:10952684-C-G | ** | ||||||
| hg38:Y:10963951-G-T | ** | ||||||
| hg38:Y:10964623-A-T | ** | ||||||
| hg38:Y:10968957-G-T | ** | ||||||
| hg38:Y:10974761-T-A | ** | ||||||
| hg38:Y:10974785-CTCCAT-C | ** | ||||||
| hg38:Y:10974796-T-C | ** | ||||||
| hg38:Y:10974797-C-T | ** | ||||||
| hg38:Y:10974815-T-A | ** | ||||||
| hg38:Y:10975860-C-A | ** | ||||||
| hg38:Y:10982563-A-G | ** | ||||||
| hg38:Y:10982571-C-A | ** | ||||||
| hg38:Y:10982616-C-T | ** | ||||||
| hg38:Y:10984408-C-A | ** | ||||||
| hg38:Y:10990093-C-G | ** | ||||||
| hg38:Y:10994673-C-A | ** | ||||||
| hg38:Y:10995647-G-T | ** | ||||||
| hg38:Y:10995687-G-C | ** | ||||||
| hg38:Y:10996346-T-G | ** | ||||||
| hg38:Y:10997421-A-C | ** | ||||||
| hg19:Y:13457569-TTCCAC-T hg38:Y:11301893-TTCCAC-T | ** | ||||||
| hg19:Y:13475507-T-C hg38:Y:11319831-T-C | ** | ||||||
| hg19:Y:13629393-C-A hg38:Y:11473717-C-A | FGC19184 | ** | |||||
| hg19:Y:13633282-A-G hg38:Y:11477606-A-G | ** | ||||||
| hg19:Y:13698825-A-T hg38:Y:11543149-A-T | DYZ17 | ** | |||||
| hg19:Y:13708650-G-T hg38:Y:11552974-G-T | DYZ17 | ** | |||||
| hg19:Y:13716633-A-T hg38:Y:11560957-A-T | DYZ17 | ** | |||||
| hg19:Y:13716684-A-T hg38:Y:11561008-A-T | DYZ17 | ** | |||||
| hg19:Y:13728866-A-G hg38:Y:11573190-A-G | DYZ17 | ** | |||||
| hg19:Y:13748319-A-T hg38:Y:11592643-A-T | DYZ17 | ** | |||||
| hg38:Y:11672996-T-A | DYZ17 | ** | |||||
| hg19:Y:13857116-GCACTT-G hg38:Y:11736410-GCACTT-G | DYZ17 | ** | |||||
| hg19:Y:13929217-A-G hg38:Y:11808511-A-G | ** | ||||||
| hg19:Y:13932530-G-A hg38:Y:11811824-G-A | ** | ||||||
| hg19:Y:13957766-G-T hg38:Y:11837060-G-T | ** | ||||||
| hg19:Y:14022936-A-T hg38:Y:11902230-A-T | ** | ||||||
| hg19:Y:14160395-G-T hg38:Y:12039689-G-T | ** | ||||||
| hg19:Y:14284168-C-A hg38:Y:12163462-C-A | ** | ||||||
| hg19:Y:14300660-A-T hg38:Y:12179954-A-T | ** | ||||||
| hg19:Y:14355178-C-A hg38:Y:12234473-C-A | ** | ||||||
| hg19:Y:14379179-T-A hg38:Y:12258475-T-A | ** | ||||||
| hg19:Y:14384055-C-A hg38:Y:12263351-C-A | ** | ||||||
| hg19:Y:14389955-C-A hg38:Y:12269251-C-A | ** | ||||||
| hg19:Y:14499720-A-G hg38:Y:12387925-A-G | ** | ||||||
| hg19:Y:14502618-A-ATT hg38:Y:12390823-A-ATT | 10×T | ** | |||||
| hg19:Y:14605197-C-A hg38:Y:12493399-C-A | ** | ||||||
| hg19:Y:14630528-C-A hg38:Y:12518597-C-A | ** | ||||||
| hg19:Y:14682523-TAA-T hg38:Y:12570589-TAA-T | ** | ||||||
| hg19:Y:14685798-A-G hg38:Y:12573864-A-G | ** | ||||||
| hg19:Y:14696010-A-T hg38:Y:12584076-A-T | ** | ||||||
| hg19:Y:14696951-G-T hg38:Y:12585017-G-T | ** | ||||||
| hg19:Y:14720126-C-A hg38:Y:12608194-C-A | ** | ||||||
| hg19:Y:14757930-T-A hg38:Y:12645999-T-A | ** | ||||||
| hg19:Y:15177569-A-T hg38:Y:13065655-A-T | ** | ||||||
| hg19:Y:15338776-T-G hg38:Y:13226894-T-G | ** | ||||||
| hg19:Y:15338780-A-C hg38:Y:13226898-A-C | ** | ||||||
| hg19:Y:15376154-C-A hg38:Y:13264274-C-A | ** | ||||||
| hg19:Y:15475267-T-C hg38:Y:13363387-T-C | ** | ||||||
| hg19:Y:15701036-A-T hg38:Y:13589156-A-T | ** | ||||||
| hg19:Y:15729074-C-A hg38:Y:13617194-C-A | ** | ||||||
| hg19:Y:15770443-C-A hg38:Y:13658563-C-A | ** | ||||||
| hg19:Y:15823646-G-T hg38:Y:13711766-G-T | ** | ||||||
| hg19:Y:15928586-C-A hg38:Y:13816706-C-A | ** | ||||||
| hg19:Y:16027669-C-A hg38:Y:13915789-C-A | ** | ||||||
| hg19:Y:16045188-T-A hg38:Y:13933308-T-A | ** | ||||||
| hg19:Y:16045189-TCTTC-T hg38:Y:13933309-TCTTC-T | ** | ||||||
| hg19:Y:16437477-C-A hg38:Y:14325597-C-A | ** | ||||||
| hg19:Y:16505077-A-G hg38:Y:14393197-A-G | ** | ||||||
| hg19:Y:16701916-C-T hg38:Y:14590036-C-T | FT37140 | ** | |||||
| hg19:Y:16896554-AAAG-A hg38:Y:14784674-AAAG-A | ** | ||||||
| hg19:Y:16896555-AAGAC-A hg38:Y:14784675-AAGAC-A | ** | ||||||
| hg19:Y:17097776-G-A hg38:Y:14985896-G-A | ** | ||||||
| hg19:Y:17346373-C-A hg38:Y:15234493-C-A | ** | ||||||
| hg19:Y:17372706-G-T hg38:Y:15260826-G-T | ** | ||||||
| hg19:Y:17486257-G-A hg38:Y:15374377-G-A | ** | ||||||
| hg19:Y:17568361-A-G hg38:Y:15456481-A-G | ** | ||||||
| hg19:Y:17605527-T-A hg38:Y:15493647-T-A | ** | ||||||
| hg19:Y:17628139-C-A hg38:Y:15516259-C-A | ** | ||||||
| hg19:Y:17634718-GT-G hg38:Y:15522838-GT-G | ** | ||||||
| hg19:Y:17697168-G-C hg38:Y:15585288-G-C | ** | ||||||
| hg19:Y:17781565-T-G hg38:Y:15669685-T-G | ** | ||||||
| hg19:Y:18006729-A-T hg38:Y:15894849-A-T | P7_Gap | ** | |||||
| hg19:Y:18121865-T-A hg38:Y:16009985-T-A | ** | ||||||
| hg19:Y:18155744-A-C hg38:Y:16043864-A-C | ** | ||||||
| hg19:Y:18183354-C-G hg38:Y:16071474-C-G | ** | ||||||
| hg19:Y:18186988-A-C hg38:Y:16075108-A-C | ** | ||||||
| hg19:Y:18188627-G-T hg38:Y:16076747-G-T | ** | ||||||
| hg19:Y:18194186-C-A hg38:Y:16082306-C-A | ** | ||||||
| hg19:Y:18337014-A-T hg38:Y:16225134-A-T | P6_Prx | ** | |||||
| hg19:Y:18337075-C-G hg38:Y:16225195-C-G | P6_Prx | ** | |||||
| hg19:Y:18407065-G-T hg38:Y:16295185-G-T | P6_Gap | ** | |||||
| hg19:Y:18466862-C-A hg38:Y:16354982-C-A | P6_Dst | ** | |||||
| hg19:Y:18541288-A-C hg38:Y:16429408-A-C | ** | ||||||
| hg19:Y:18779350-A-G hg38:Y:16667470-A-G | ** | ||||||
| hg19:Y:18780495-C-A hg38:Y:16668615-C-A | ** | ||||||
| hg19:Y:18864655-G-T hg38:Y:16752775-G-T | ** | ||||||
| hg19:Y:18905440-G-A hg38:Y:16793560-G-A | ** | ||||||
| hg19:Y:18926872-C-CAAA hg38:Y:16814992-C-CAAA | 17×A | ** | |||||
| hg19:Y:18928608-G-T hg38:Y:16816728-G-T | ** | ||||||
| hg19:Y:18997153-C-A hg38:Y:16885273-C-A | ** | ||||||
| hg19:Y:19129377-G-T hg38:Y:17017497-G-T | ** | ||||||
| hg19:Y:19312474-C-A hg38:Y:17200594-C-A | ** | ||||||
| hg19:Y:19423823-C-A hg38:Y:17311943-C-A | ** | ||||||
| hg19:Y:19476416-A-T hg38:Y:17364536-A-T | ** | ||||||
| hg19:Y:19628461-A-T hg38:Y:17516581-A-T | P5_Prx | ** | |||||
| hg19:Y:19628520-A-T hg38:Y:17516640-A-T | P5_Prx | ** | |||||
| hg19:Y:20104623-A-T hg38:Y:17992743-A-T | P5_Dst | ** | |||||
| hg19:Y:20104656-A-T hg38:Y:17992776-A-T | P5_Dst | ** | |||||
| hg19:Y:20678208-G-T hg38:Y:18516322-G-T | P4_Prx | ** | |||||
| hg19:Y:20678228-C-A hg38:Y:18516342-C-A | P4_Prx | ** | |||||
| hg19:Y:20678229-C-A hg38:Y:18516343-C-A | P4_Prx | ** | |||||
| hg19:Y:20678267-T-A hg38:Y:18516381-T-A | P4_Prx | ** | |||||
| hg19:Y:20691371-T-A hg38:Y:18529485-T-A | P4_Prx | ** | |||||
| hg19:Y:20691387-T-A hg38:Y:18529501-T-A | P4_Prx | ** | |||||
| hg19:Y:20691402-T-A hg38:Y:18529516-T-A | P4_Prx | ** | |||||
| hg19:Y:20845025-T-G hg38:Y:18683139-T-G | P4_Dst | ** | |||||
| hg19:Y:20845081-G-T hg38:Y:18683195-G-T | P4_Dst | ** | |||||
| hg19:Y:20888601-AAAG-T hg38:Y:18726715-AAAG-T | P4_Dst | ** | |||||
| hg19:Y:21207527-A-C hg38:Y:19045641-A-C | ** | ||||||
| hg19:Y:21583818-A-T hg38:Y:19421932-A-T | ** | ||||||
| hg19:Y:22068762-C-A hg38:Y:19906876-C-A | ** | ||||||
| hg19:Y:22132813-C-A hg38:Y:19970927-C-A | ** | ||||||
| hg19:Y:22205402-C-A hg38:Y:20043516-C-A | ** | ||||||
| hg19:Y:22205406-G-C hg38:Y:20043520-G-C | ** | ||||||
| hg19:Y:22504897-C-G hg38:Y:20343011-C-G | DYZ19 | ** | |||||
| hg19:Y:22504920-C-A hg38:Y:20343034-C-A | DYZ19 | ** | |||||
| hg19:Y:22591520-C-A hg38:Y:20429634-C-A | ** | ||||||
| hg19:Y:22602378-C-A hg38:Y:20440492-C-A | ** | ||||||
| hg19:Y:22655161-C-A hg38:Y:20493275-C-A | ** | ||||||
| hg19:Y:23078977-T-C hg38:Y:20917091-T-C | ** | ||||||
| hg19:Y:23186063-C-A hg38:Y:21024177-C-A | ** | ||||||
| hg19:Y:23441332-T-A hg38:Y:21279446-T-A | ** | ||||||
| hg19:Y:23465253-C-G hg38:Y:21303367-C-G | ** | ||||||
| hg19:Y:24241298-A-C hg38:Y:22095151-A-C | P3_b1 | ** | |||||
| hg19:Y:24307932-T-A hg38:Y:22161785-T-A | P3_t1 | ** | |||||
| hg19:Y:25602464-C-A hg38:Y:23456317-C-A | P1_gr1 | ** | |||||
| hg19:Y:25602483-C-A hg38:Y:23456336-C-A | P1_gr1 | ** | |||||
| hg19:Y:25859366-G-T hg38:Y:23713219-G-T | P1_Y1 | ** | |||||
| hg19:Y:25859394-A-T hg38:Y:23713247-A-T | P1_Y1 | ** | |||||
| hg19:Y:25876611-G-T hg38:Y:23730464-G-T | P1_Y1 | ** | |||||
| hg19:Y:25959088-G-T hg38:Y:23812941-G-T | P1_Y1 | ** | |||||
| hg19:Y:25959106-G-T hg38:Y:23812959-G-T | P1_Y1 | ** | |||||
| hg19:Y:26082181-T-A hg38:Y:23936034-T-A | P1_Y1 | ** | |||||
| hg19:Y:26440455-C-A hg38:Y:24294308-C-A | P1_Y1 | ** | |||||
| hg19:Y:27527338-T-A hg38:Y:25381191-T-A | P1_Y2 | ** | |||||
| hg19:Y:27736674-A-AT hg38:Y:25590527-A-AT | P1_Y2 | ** | |||||
| hg19:Y:27847758-A-ATGTG hg38:Y:25701611-A-ATGTG | P1_Y2 | 9×TG | ** | ||||
| hg19:Y:27863688-G-T hg38:Y:25717541-G-T | P1_Y2 | ** | |||||
| hg19:Y:27971757-ACACAC-A hg38:Y:25825610-ACACAC-A | P1_Y2 | ** | |||||
| hg19:Y:28469507-C-A hg38:Y:26323360-C-A | ** | ||||||
| hg19:Y:28570109-C-A hg38:Y:26423962-C-A | ** | ||||||
| hg19:Y:28577892-C-T hg38:Y:26431745-C-T | ** | ||||||
| hg19:Y:28594344-C-A hg38:Y:26448197-C-A | ** | ||||||
| hg19:Y:28597259-G-T hg38:Y:26451112-G-T | ** | ||||||
| hg19:Y:28598583-T-A hg38:Y:26452436-T-A | ** | ||||||
| hg19:Y:28608696-C-A hg38:Y:26462549-C-A | ** | ||||||
| hg19:Y:28706266-A-T hg38:Y:26560119-A-T | ** | ||||||
| hg19:Y:28762612-T-A hg38:Y:26616465-T-A | ** | ||||||
| hg19:Y:28790718-T-A hg38:Y:26644571-T-A | ** | ||||||
| hg19:Y:28818251-T-A hg38:Y:26672104-T-A | ** | ||||||
| hg19:Y:28818260-T-A hg38:Y:26672113-T-A | ** | ||||||
| hg38:Y:56840588-A-T | ** | ||||||
| hg38:Y:56845515-G-C | ** | ||||||
| hg38:Y:56845528-G-A | ** | ||||||
| hg19:Y:13472195-C-G hg38:Y:11316519-C-G | *** | ||||||
| hg19:Y:20473133-G-A hg38:Y:18311247-G-A | BY154935 | P5_Dst | *** | ||||
| hg19:Y:18857575-CT-C,CTT hg38:Y:16745695-CT-C,CTT | 15×T | *** | |||||
| hg19:Y:22052587-C-A hg38:Y:19890701-C-A | *** | ||||||
| hg19:Y:13461046-T-A,C hg38:Y:11305370-T-A,C | *** | ||||||
| hg19:Y:24600411-CCTCT-C hg38:Y:22454264-CCTCT-C | P3_t2 | 8×CT | *** | ||||
| hg19:Y:2790303-CTTT-C,CTTTT hg38:Y:2922262-CTTT-C,CTTTT | 15×T | *** | |||||
| hg19:Y:7861306-C-A hg38:Y:7993265-C-A | *** | ||||||
| hg38:Y:10828716-C-A | *** | ||||||
| hg38:Y:10884634-C-A | *** | ||||||
| hg19:Y:13472192-C-A,T hg38:Y:11316516-C-A,T | *** | ||||||
| hg19:Y:13489011-CAT-C,CGT hg38:Y:11333335-CAT-C,CGT | *** | ||||||
| hg19:Y:13566548-C-A hg38:Y:11410872-C-A | *** | ||||||
| hg19:Y:16045208-T-TTA hg38:Y:13933328-T-TTA | *** | ||||||
| hg19:Y:17103866-G-T hg38:Y:14991986-G-T | *** | ||||||
| hg19:Y:17923875-AGT-A hg38:Y:15811995-AGT-A | *** | ||||||
| hg19:Y:19261147-TTTC-T,TTTTC hg38:Y:17149267-TTTC-T,TTTTC | *** | ||||||
| hg19:Y:21813843-G-T hg38:Y:19651957-G-T | *** | ||||||
| hg19:Y:24492365-T-C hg38:Y:22346218-T-C | *** | ||||||
| hg19:Y:28598620-C-A hg38:Y:26452473-C-A | *** | ||||||
| hg38:Y:56838489-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 357319 | 9871669 | 8048180 | 7926783 |
| Used in age calculations | 9871669 | 8048180 | 7926783 |
| Counts of SNPs | 1 | 1 |
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