Tree Position

R-M269 > L23 > L51 > P310 > L151 > S1194 > S1200 > S14328 > A8469 > ZS5789

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
164249
8400894-C-T 8532853-C-T YYA*
6758025-C-CA 6889984-C-CA 12×AA*
26147354-C-CA 24001207-C-CA P1_Y1 10×AA*
22313166-A-G 20151280-A-G DYZ19 A*
6344408-A-G 6476367-A-G A*
6221950-C-T 6353909-C-T IR3_Dst A*
22309814-T-A 20147928-T-A DYZ19 A*
22285563-G-C 20123677-G-C DYZ19 A*
19892203-A-G 17780323-A-G P5_Prx A*
22277763-C-T 20115877-C-T DYZ19 A*
25880572-T-A 23734425-T-A P1_Y1 A*
25567335-G-GA 23421188-G-GA P1_gr1 12×AA*
19951069-G-A 17839189-G-A P5_Prx A*
22340178-G-C 20178292-G-C DYZ19 A*
14079191-A-G 11958485-A-G A8497 YY+
15305966-GTTTC-G 13194068-GTTTC-G +
15145849-C-T 13033936-C-T BY99924 YY+
14624252-T-C 12512452-T-C BY39949L128 PF3499 BY27144 YY21×AC+
18060305-CAT-C 15948425-CAT-C +
16794013-T-C 14682133-T-C A8511 YY+
28802962-T-A 26656815-T-A BY48973 +
13454954-G-C 11299278-G-C A8492 +
16667799-G-A 14555919-G-A A8508 YY+
17039878-C-T 14927998-C-T A8514 YY+
12437-A-T FGC80265 +
18601601-G-T 16489721-G-T PH3858 YY+
7703506-T-C 7835465-T-C A8475 YY+
16507761-G-T 14395881-G-T A8507 YY+
21494639-AC-A 19332753-AC-A +
15610245-CT-C 13498365-CT-C +
21617113-C-G 19455227-C-G BY134234 YY+
18128762-C-T 16016882-C-T Y14076 BY1405 YY+
14857374-G-A 12745440-G-A A8504 YY+
16968701-G-A 14856821-G-A A8513 YY+
14772763-C-A 12660832-C-A A8503 YY+
7383494-T-A 7515453-T-A A8471 YY+
2839519-C-G 2971478-C-G A8463 YY+
14317371-G-T 12196665-G-T A8501 YY+
19180924-A-G 17069044-A-G A8528 Y+
14482099-G-A 12361368-G-A PR1422 YY+
17678741-A-C 15566861-A-C A8520 YY+
23261821-T-C 21099935-T-C A8540 YY+
17565914-C-A 15454034-C-A A8518 YY+
17572380-G-C 15460500-G-C A8519 YY+
16431821-GA-G 14319941-GA-G 10×A+
18904691-A-T 16792811-A-T A8527 YY+
18146543-G-A 16034663-G-A A8522 YY+
23269023-CAT-C 21107137-CAT-C +
7183-T-A +
22255301-T-A 20093415-T-A DYZ19 *
13868404-CGGAAC-C,CGGAAT 11747698-CGGAAC-C,CGGAAT *
13842730-GTGGAATGGAA-G 11722024-GTGGAATGGAA-G 12×TGGAA*
18667929-T-TC 16556049-T-TC 9×C*
23267695-GA-G 21105809-GA-G 11×A*
22298819-G-T 20136933-G-T DYZ19 *
13450569-C-G 11294893-C-G *
22233214-G-A 20071328-G-A ZS10345 DYZ19 *
22430921-T-A 20269035-T-A DYZ19 *
10935919-C-A **
10954817-G-A **
10911701-C-G **
10927257-G-T **
10894055-C-A **
10838878-C-A **
10850864-C-A **
10857760-T-C **
10857764-A-G **
10857765-G-T **
10857775-C-T **
10894085-C-A **
10927245-A-T **
10894301-C-A **
10911699-T-A **
10961380-C-CATTT **
10911727-G-A **
10911751-T-G **
10921136-C-T **
10961378-C-CT **
10982405-CCTT-C **
10961383-C-A **
13488775-C-T 11333099-C-T **
13433227-C-T 11277551-C-T **
13461921-C-G 11306245-C-G **
13463359-C-A 11307683-C-A BY85656 **
13469607-C-A 11313931-C-A **
13478264-AG-A 11322588-AG-A **
13488663-G-A 11332987-G-A **
13488737-C-G 11333061-C-G **
13496793-TAGTTG-T 11341117-TAGTTG-T **
13243490-G-T 11087814-G-T **
13504902-T-G 11349226-T-G **
13641345-G-T 11485669-G-T **
11643697-T-C **
11655490-C-A **
11655596-A-G **
13800694-G-T 11679988-G-T **
13809330-A-T 11688624-A-T FT91158 **
13833503-A-G 11712797-A-G **
13311786-C-A 11156110-C-A **
13240725-A-T 11085049-A-T **
10961442-A-C **
10987196-C-T **
10976191-C-T **
10977485-C-A **
10982347-A-G **
10982366-A-T **
10982378-C-T **
10982404-T-TGTACTCTA **
10982416-C-T **
10987207-C-CATTTT **
13202589-C-A 11046913-C-A **
10988585-T-TACTTC **
10988589-C-CCATAA **
10988602-C-G **
11000141-T-C **
11003731-T-C **
11003738-C-CATTCA **
11021704-C-T **
11035802-C-T **
10781679-T-A **
9934773-T-C 10097164-T-C **
10777308-G-T **
5871941-T-A 6003900-T-A **
5318382-C-T 5450341-C-T **
5435905-G-A 5567864-G-A **
5565731-T-C 5697690-T-C **
5761632-C-A 5893591-C-A **
5799604-C-A 5931563-C-A **
5799923-A-G 5931882-A-G **
5861542-A-C 5993501-A-C **
6191304-C-CAA 6323263-C-CAA IR3_Dst 15×A**
5221043-C-CTTT 5353002-C-CTTT 14×T**
6368964-A-G 6500923-A-G **
6424777-T-C 6556736-T-C **
6465439-C-A 6597398-C-A **
6514114-C-G 6646073-C-G **
6648494-T-G 6780453-T-G **
6699100-C-G 6831059-C-G **
6731097-C-G 6863056-C-G **
5313403-C-A 5445362-C-A **
5214567-C-A 5346526-C-A **
6829594-C-A 6961553-C-A **
4448763-A-T 4580722-A-T **
4242947-A-G 4374906-A-G **
4271337-C-A 4403296-C-A **
4292717-A-G 4424676-A-G **
4292723-T-G 4424682-T-G **
4292728-G-A 4424687-G-A **
4292740-A-G 4424699-A-G **
4292746-A-G 4424705-A-G **
4672359-C-A 4804318-C-A **
5212732-C-T 5344691-C-T FT166456 **
4700878-A-G 4832837-A-G **
4744312-C-A 4876271-C-A **
4918233-CA-C 5050192-CA-C **
4954225-T-G 5086184-T-G **
4970350-A-G 5102309-A-G **
5084370-C-A 5216329-C-A **
5119674-T-C 5251633-T-C **
5125649-C-A 5257608-C-A **
6814503-G-T 6946462-G-T **
6930552-T-G 7062511-T-G **
10776065-C-A **
9996137-T-C 10158528-T-C **
8822601-C-A 8954560-C-A **
8970841-TG-T 9133232-TG-T **
9234403-A-G 9396794-A-G **
9474101-A-G 9636492-A-G **
9996123-G-GA 10158514-G-GA **
9996131-G-A 10158522-G-A **
9996133-T-C 10158524-T-C **
9996138-G-A 10158529-G-A **
8295787-G-A 8427746-G-A **
9996144-G-CCT 10158535-G-CCT **
10025814-G-T 10188205-G-T A8489 **
10029970-C-A 10192361-C-A **
10033852-C-T 10196243-C-T **
10056313-C-T 10218704-C-T **
10746462-C-A **
10764553-T-A **
8631408-TTGC-T 8763367-TTGC-T **
8171888-C-A 8303847-C-A **
7080721-A-C 7212680-A-C **
7341416-T-G 7473375-T-G **
7186324-C-A 7318283-C-A **
7201487-C-G 7333446-C-G **
7277636-C-A 7409595-C-A **
7287909-C-A 7419868-C-A **
7287920-C-A 7419879-C-A **
7304456-T-C 7436415-T-C **
7313525-G-A 7445484-G-A **
7341457-A-C 7473416-A-C **
8112522-C-T 8244481-C-T **
7380163-G-T 7512122-G-T **
7573010-G-T 7704969-G-T **
7643562-GGA-G 7775521-GGA-G **
7695750-A-G 7827709-A-G A8474 **
7717410-CT-C 7849369-CT-C **
7821109-G-A 7953068-G-A **
7829206-A-G 7961165-A-G **
7853289-T-A 7985248-T-A A8477 **
13859880-G-C 11739174-G-C **
14802913-C-T 12690984-C-T **
13920771-CT-C 11800065-CT-C **
22337695-T-C 20175809-T-C DYZ19 **
22214793-C-T 20052907-C-T FT122732 **
22214794-A-G 20052908-A-G **
22214812-A-G 20052926-A-G **
22214816-T-C 20052930-T-C **
22214818-C-G 20052932-C-G **
22214831-A-G 20052945-A-G **
22341135-A-C 20179249-A-C DYZ19 **
21963789-A-C 19801903-A-C **
22341137-G-T 20179251-G-T DYZ19 **
22341160-G-C 20179274-G-C DYZ19 **
22429414-C-T 20267528-C-T DYZ19 **
22448782-C-A 20286896-C-A DYZ19 **
22591400-A-G 20429514-A-G **
22614949-C-A 20453063-C-A **
22639328-A-T 20477442-A-T **
21974979-G-A 19813093-G-A **
21770479-C-T 19608593-C-T **
22950232-T-C 20788346-T-C **
20727680-T-C 18565794-T-C P4_Prx **
19947764-TG-T 17835884-TG-T P5_Prx **
20333182-A-T 18171296-A-T P5_Dst **
20333185-T-A 18171299-T-A P5_Dst **
20333190-A-AG 18171304-A-AG P5_Dst **
20727653-G-T 18565767-G-T P4_Prx **
20727679-T-C 18565793-T-C P4_Prx **
20741859-T-TC 18579973-T-TC P4_Prx **
21677926-C-A 19516040-C-A **
21049249-C-A 18887363-C-A **
21201692-C-A 19039806-C-A **
21211719-T-A 19049833-T-A **
21334692-C-A 19172806-C-A **
21410148-G-A 19248262-G-A **
21623812-GTTTTT-G 19461926-GTTTTT-G 25×T**
21672196-C-T 19510310-C-T **
22950224-T-G 20788338-T-G **
22991255-A-G 20829369-A-G **
19600437-GCGTA-G 17488557-GCGTA-G P5_Prx **
26379412-A-AG 24233265-A-AG P1_Y1 **
23997383-A-C 21851236-A-C **
24258258-T-C 22112111-T-C P3_b1 **
24270935-T-A 22124788-T-A P3_b1 **
24878308-G-T 22732161-G-T g1 **
26238035-A-AT 24091888-A-AT P1_Y1 **
26355423-C-A 24209276-C-A P1_Y1 **
28469683-T-C 26323536-T-C **
21754042-C-A **
28566952-C-A 26420805-C-A **
28597430-A-G 26451283-A-G FT11384 **
28611593-C-A 26465446-C-A **
28613206-T-C 26467059-T-C **
28659731-G-A 26513584-G-A **
56825987-T-C **
56854996-T-A **
23983732-C-G 21837585-C-G **
23802190-C-A 21640304-C-A **
23005526-G-A 20843640-G-A **
23049659-A-G 20887773-A-G **
23037982-CCC-G 20876096-CCC-G **
23037999-C-CT 20876113-C-CT **
23038005-A-G 20876119-A-G **
23038013-C-T 20876127-C-T **
23038016-C-T 20876130-C-T **
23038022-C-T 20876136-C-T **
23038044-C-G 20876158-C-G **
23062690-A-T 20900804-A-T **
23778040-G-C 21616154-G-C **
23111529-A-T 20949643-A-T **
23111592-C-A 20949706-C-A **
23111747-A-G 20949861-A-G **
23176832-G-A 21014946-G-A **
23285543-G-T 21123657-G-T **
23395830-C-A 21233944-C-A **
23442427-C-A 21280541-C-A **
19746031-C-T 17634151-C-T P5_Prx **
19479356-A-G 17367476-A-G **
13922743-G-T 11802037-G-T FT245826 **
15302510-C-A 13190609-C-A **
4063812-C-A 4195771-C-A **
14832058-C-T 12720125-C-T **
15044327-C-A 12932417-C-A **
15111607-A-G 12999694-A-G **
15288148-A-T 13176247-A-T **
15288167-C-A 13176266-C-A **
15321369-C-A 13209487-C-A **
14714704-C-A 12602771-C-A **
15346946-G-A 13235065-G-A **
15392438-C-A 13280558-C-A **
15443827-TG-T 13331947-TG-T **
15444000-A-T 13332120-A-T **
15542135-T-C 13430255-T-C **
15731241-A-G 13619361-A-G **
15743659-T-C 13631779-T-C **
14760485-G-T 12648554-G-T **
14701257-C-A 12589323-C-A **
15936765-A-G 13824885-A-G **
14079720-C-A 11959014-C-A **
13987233-T-C 11866527-T-C **
13993574-C-A 11872868-C-A **
13996381-G-A 11875675-G-A **
13996448-A-G 11875742-A-G **
14070231-C-A 11949525-C-A **
14074080-C-A 11953374-C-A **
14271231-C-A 12150525-C-A **
14557116-G-A 12445317-G-A **
14381021-C-A 12260317-C-A **
14490341-A-C 12369610-A-C **
14499524-G-A 12387729-G-A **
14522263-C-A 12410464-C-A **
14537634-G-A 12425835-G-A **
14553136-A-G 12441337-A-G **
14557063-A-T 12445264-A-T **
15773697-G-C 13661817-G-C **
15987834-C-A 13875954-C-A **
19416643-C-A 17304763-C-A **
18138275-C-A 16026395-C-A **
17886065-G-T 15774185-G-T **
17926650-C-A 15814770-C-A **
17929563-G-T 15817683-G-T **
17933973-T-A 15822093-T-A **
18040736-C-A 15928856-C-A **
18086121-C-T 15974241-C-T **
18290905-G-T 16179025-G-T P6_Prx **
17540484-C-A 15428604-C-A **
18703104-C-A 16591224-C-A **
18929961-T-C 16818081-T-C **
19024839-G-A 16912959-G-A Y103408 **
19041433-G-T 16929553-G-T **
19043689-C-A 16931809-C-A **
19183909-A-T 17072029-A-T **
19410064-C-A 17298184-C-A **
17795755-C-A 15683875-C-A **
17480237-C-A 15368357-C-A **
16052289-C-A 13940409-C-A **
16342348-A-C 14230468-A-C **
16084088-C-A 13972208-C-A **
16271827-G-T 14159947-G-T **
16275738-C-A 14163858-C-A **
16309101-C-A 14197221-C-A **
16309109-G-A 14197229-G-A **
16309115-G-T 14197235-G-T **
16309119-C-G 14197239-C-G **
16357167-C-A 14245287-C-A **
17098913-G-A 14987033-G-A **
16422069-A-T 14310189-A-T **
16605083-C-A 14493203-C-A **
16640303-C-G 14528423-C-G **
16658929-C-A 14547049-C-A **
16729286-C-A 14617406-C-A **
16814026-C-A 14702146-C-A **
16941576-T-C 14829696-T-C **
4133010-C-A 4264969-C-A **
26228717-G-T 24082570-G-T BY226727 P1_Y1 **
3994541-C-A 4126500-C-A **
10992263-T-C **
17343602-C-A 15231722-C-A **
13859437-A-G 11738731-A-G **
22023226-C-G 19861340-C-G **
14070193-C-A 11949487-C-A **
10673862-C-T BY83664 **
27952130-C-T 25805983-C-T P1_Y2 **
6585105-C-A 6717064-C-A **
10744492-T-TA **
18792740-C-A 16680860-C-A **
6277760-G-C 6409719-G-C IR3_Dst **
21149582-G-GT 18987696-G-GT 27×T**
10768550-C-T **
10763007-A-G **
10763016-C-T **
10763029-T-TCTATC **
10744497-TC-T **
10744490-A-T **
10763056-C-A **
10664645-CATCCA-C **
13487672-ATC-A 11331996-ATC-A **
8970826-T-G 9133217-T-G **
10987154-C-T **
10987189-T-TGACAC **
10961390-C-A **
21556942-TG-T 19395056-TG-T **
10664622-C-T **
10664654-C-G **
10744476-T-C **
10664658-G-T **
10664667-C-T **
10664669-C-G **
7420617-C-A 7552576-C-A **
7939353-C-A 8071312-C-A **
10992283-C-T **
10744471-T-CCACAC **
10763049-T-C **
10763062-A-G **
10790218-C-A FT91710 **
10983965-C-G **
10983930-T-A **
10776523-A-T **
10982365-T-C **
13859377-A-AT 11738671-A-AT **
13859381-C-CAGTA 11738675-C-CAGTA **
10983956-A-C **
10983966-A-G **
14357735-C-A 12237030-C-A **
10983980-CA-C **
10983997-T-C **
14698488-C-A 12586554-C-A **
23440250-C-A 21278364-C-A **
10973943-C-A **
10927200-A-T **
13958400-TAA-T 11837694-TAA-T 14×A**
15402379-C-A 13290499-C-A **
3640252-C-A 3772211-C-A **
11643692-T-C **
25934942-A-AT 23788795-A-AT P1_Y1 **
10992306-A-C **
4781271-G-T 4913230-G-T **
23440676-AT-A 21278790-AT-A 9×T**
10673830-T-C BY83661 **
10673835-C-G **
10762954-C-T **
9996128-C-T 10158519-C-T **
14835327-ATT-A 12723394-ATT-A 14×T**
10673903-C-T **
10673900-T-C **
28720745-C-A 26574598-C-A **
14384434-G-T 12263730-G-T **
10982438-A-C **
10762973-C-A **
10996938-G-T **
13487652-T-G 11331976-T-G **
10790230-A-G FT48545 **
13487726-C-A 11332050-C-A **
10992293-T-G **
26228723-A-T 24082576-A-T P1_Y1 **
14867088-C-T 12755158-C-T **
58976687-TGCTGAATTCC-T 56830540-TGCTGAATTCC-T **
13478291-C-A 11322615-C-A **
13478273-T-C 11322597-T-C **
13478300-C-A 11322624-C-A **
14774281-TG-T 12662350-TG-T **
16073050-C-A 13961170-C-A **
13198969-C-A 11043293-C-A **
9996148-A-G 10158539-A-G **
9996153-C-G 10158544-C-G **
13488790-C-A 11333114-C-A **
58981315-C-T 56835168-C-T **
18480342-G-A 16368462-G-A P6_Dst **
58982049-T-A 56835902-T-A **
58982062-AC-A 56835915-AC-A **
6698832-G-T 6830791-G-T BY31549 12×T**
13566909-ATG-A 11411233-ATG-A 12×TG**
22429398-G-A 20267512-G-A BY191935 DYZ19 **
16309113-C-T 14197233-C-T **
58982051-T-C 56835904-T-C **
58982068-T-C 56835921-T-C **
58975095-CCATGT-C 56828948-CCATGT-C **
13859432-A-G 11738726-A-G **
13859407-A-G 11738701-A-G **
22341150-T-C 20179264-T-C DYZ19 **
22341153-T-A 20179267-T-A DYZ19 **
20645843-C-CTTT 18483957-C-CTTT P4_Prx 29×T**
23833034-A-C 21671148-A-C **
13859403-T-C 11738697-T-C **
2750856-G-A 2882815-G-A **
7195306-G-A 7327265-G-A S9942 **
13919238-C-T 11798532-C-T S15216 **
18953059-A-G 16841179-A-G 8×G**
19042197-G-A 16930317-G-A **
58980811-C-A 56834664-C-A **
58982072-A-T 56835925-A-T **
13478242-C-A 11322566-C-A **
13488715-C-A 11333039-C-A **
10894508-C-T **
10992307-T-C **
24673074-G-T 22526927-G-T P3_b2 **
21994006-CAGAG-C 19832120-CAGAG-C 9×AG**
21438773-C-A 19276887-C-A **
16704473-C-A 14592593-C-A **
8181221-A-G 8313180-A-G **
28556325-T-G 26410178-T-G YFS026709 **
15932370-C-A 13820490-C-A **
10988507-C-T **
19130773-C-A 17018893-C-A **
15928722-G-A 13816842-G-A **
10988539-T-A **
10988541-A-G **
17071190-CGAAA-C 14959310-CGAAA-C 6×GAAA**
10937402-T-A **
10937425-C-T **
10988532-C-T **
10988607-C-A **
14985055-A-C 12873123-A-C **
10895835-C-CTATTG **
3436435-T-G 3568394-T-G FGC15044 **
28492689-C-CA 26346542-C-CA 18×A**
58981327-A-T 56835180-A-T **
16462870-C-A 14350990-C-A **
13478244-C-A 11322568-C-A **
23391488-C-T 21229602-C-T F26020 **
7166619-T-C 7298578-T-C **
10895857-A-G **
10992256-C-A **
10895875-C-G **
10685532-A-C **
10685536-C-T **
10685541-C-T **
10927238-C-T **
14358410-GAA-G 12237705-GAA-G 14×A**
10926657-CCGTTG-C **
10961564-T-A **
4087784-C-A 4219743-C-A **
10992300-C-T **
19819587-T-TC 17707707-T-TC P5_Prx **
2745002-G-T 2876961-G-T **
7579616-C-A 7711575-C-A **
6580499-C-A 6712458-C-A **
9745898-G-GC 9908289-G-GC **
3272958-C-A 3404917-C-A **
16719973-A-T 14608093-A-T **
23036800-C-A 20874914-C-A **
22238358-G-T 20076472-G-T DYZ19 **
21297769-C-A 19135883-C-A **
3116526-C-A 3248485-C-A **
10673866-T-TTCACA **
10673884-A-ACGTCT **
4540210-C-A 4672169-C-A **
14062008-TACAA-T 11941302-TACAA-T **
28529477-T-A 26383330-T-A **
10961393-C-G **
11649059-C-A **
19733306-C-T 17621426-C-T P5_Prx **
9075188-CTTT-C 9237579-CTTT-C 20×T**
10850445-C-A FT434063 **
13937125-C-A 11816419-C-A **
6359666-C-A 6491625-C-A **
10857759-C-A **
10969170-C-A **
5755162-C-A 5887121-C-A **
10992360-C-T **
18190817-G-T 16078937-G-T **
10804780-TATTCCATTCCATTCC-T **
26377817-C-A 24231670-C-A P1_Y1 **
56829918-C-T **
10954813-C-T **
15680000-C-A 13568120-C-A **
15995196-C-A 13883316-C-A **
28469328-C-A 26323181-C-A **
14757195-C-A 12645264-C-A **
9398030-G-T 9560421-G-T **
10024230-C-A 10186621-C-A **
23838928-C-A 21677042-C-A **
9996176-G-C 10158567-G-C **
9416869-C-A 9579260-C-A **
14357804-C-A 12237099-C-A **
19314709-ATTTTTT-A 17202829-ATTTTTT-A 17×T**
2775411-C-A 2907370-C-A **
10927258-C-G **
15731220-C-T 13619340-C-T **
7097461-G-T 7229420-G-T **
2845182-A-C 2977141-A-C **
2949457-C-A 3081416-C-A **
2960225-C-G 3092184-C-G **
3045806-C-A 3177765-C-A **
3375416-C-A 3507375-C-A **
3620810-A-T 3752769-A-T **
5200651-GT-G 5332610-GT-G **
7142016-C-A 7273975-C-A A17536 **
13488674-C-G 11332998-C-G **
3804786-C-A 3936745-C-A **
7338442-GTA-G 7470401-GTA-G **
19979865-T-TC 17867985-T-TC P5_Prx **
14067209-C-A 11946503-C-A **
13596409-C-A 11440733-C-A **
28720132-C-CTT 26573985-C-CTT 24×T**
7699244-C-A 7831203-C-A **
3328723-C-A 3460682-C-A **
10762985-C-T **
13502005-C-A 11346329-C-A **
5587046-G-T 5719005-G-T **
7432314-C-A 7564273-C-A **
10762942-A-C **
10762946-C-T **
10762959-T-G **
10762960-C-T **
28591319-C-A 26445172-C-A **
28659549-C-A 26513402-C-A **
16705691-C-A 14593811-C-A **
56835652-C-CCACTA **
14226557-C-A 12105851-C-A **
20727693-T-TA 18565807-T-TA P4_Prx **
17402501-CTT-C 15290621-CTT-C 14×T**
5534704-A-G 5666663-A-G **
28611685-C-A 26465538-C-A **
28724195-G-T 26578048-G-T **
20360959-T-TG 18199073-T-TG P5_Dst **
16309106-G-A 14197226-G-A **
16020789-C-A 13908909-C-A **
18976520-C-A 16864640-C-A **
18256264-C-A 16144384-C-A **
13487666-G-GCCCCCGAAAAGCT 11331990-G-GCCCCCGAAAAGCT **
28533700-GTT-G 26387553-GTT-G 15×T**
13859364-G-GGGAGT 11738658-G-GGGAGT **
10983917-C-T **
7897497-CT-C 8029456-CT-C 9×T**
18926897-G-GA 16815017-G-GA **
13859411-A-AGTAG 11738705-A-AGTAG **
10969248-C-A **
13859412-A-AG 11738706-A-AG **
10839044-C-A **
10992370-C-T **
22436808-G-A 20274922-G-A DYZ19 **
13474645-A-G 11318969-A-G **
21438279-C-A 19276393-C-A **
10927249-G-A FT436827 **
26089834-T-C 23943687-T-C P1_Y1 **
10961368-C-A **
8865931-C-A 8997890-C-A **
13478227-C-A 11322551-C-A **
22214788-A-T 20052902-A-T **
22214787-A-G 20052901-A-G **
19206740-GTAA-G 17094860-GTAA-G **
11643678-G-A **
5367042-C-A 5499001-C-A **
15605385-C-A 13493505-C-A **
17090839-ATTTT-A 14978959-ATTTT-A 29×T**
10983935-C-T **
10983932-T-A **
13631256-T-C 11475580-T-C **
16636888-C-A 14525008-C-A FTA55820 **
16056071-C-A 13944191-C-A **
10983915-C-T **
19183859-C-A 17071979-C-A **
14589387-C-A 12477587-C-A **
17781483-T-TTTTTATTTTA 15669603-T-TTTTTATTTTA 16×TTTTA***
14159880-G-T 12039174-G-T ***
13461935-C-A 11306259-C-A ***
13489383-C-G 11333707-C-G ***
58979116-C-A 56832969-C-A ***
11643738-G-A,C ***
10682505-T-C ***
56832116-T-A ***
56834454-ATTCCATTCCCTTCCA-A,ATTCCATTCCCTTCCT ***
13489631-A-G 11333955-A-G ***
58975925-G-C 56829778-G-C ***
56831681-G-C,CTTTCC ***
24359441-G-GA 22213294-G-GA 10×A***
18900954-C-A 16789074-C-A ***
10682496-C-A ***
4136680-A-T 4268639-A-T BY49037 FT209229Z7081 ***
2836350-CTTT-C,CTTTT 2968309-CTTT-C,CTTTT 19×T***
21362531-TA-T 19200645-TA-T 10×A***
2778387-T-C 2910346-T-C ***
7582106-CAA-C 7714065-CAA-C 14×A***
13489701-C-A 11334025-C-A ***
23981833-ATGTGTG-A,ATGTG 21835686-ATGTGTG-A,ATGTG 17×TG***
21663289-C-A 19501403-C-A A12009 ***
17141942-CTG-C 15030062-CTG-C 8×TG***
22580068-C-T 20418182-C-T 19×T***
23045494-C-A 20883608-C-A ***
15477310-G-A 13365430-G-A ***
13482633-C-A 11326957-C-A ***
13489625-AC-A 11333949-AC-A ***
17952623-C-T 15840743-C-T 16×T***
10796668-A-G ***
8126299-TTTTTATTTTA-T 8258258-TTTTTATTTTA-T 9×TTTTA***
10682591-C-T ***
11022899-C-CTCAAT ***
15967495-C-T 13855615-C-T ***
10958348-C-T ***
10958346-T-C,G ***
7733771-C-A 7865730-C-A ***
56836993-T-G ***
10987883-C-A ***
10682522-C-T ***
11643701-A-G ***
13557795-C-A 11402119-C-A ***
13446699-T-TCATTC 11291023-T-TCATTC ***
8350540-C-A 8482499-C-A ***
10682569-T-C ***
9048193-G-T 9210584-G-T ***
18093004-C-G 15981124-C-G ***
10682561-C-G ***
15761465-T-C 13649585-T-C ***
10958329-C-T ***
13937380-C-A 11816674-C-A ***
10093855-A-G 10256246-A-G ***
10657333-TG-T ***
10682500-T-A ***
10682504-T-TTCAC ***
10682577-C-A ***
19187385-ATTTT-A 17075505-ATTTT-A 28×T***
58980693-A-C,T 56834546-A-C,T ***
11643707-T-A ***
13489616-CCCAC-C,CCCCCT 11333940-CCCAC-C,CCCCCT ***
10682512-C-A ***
13485916-A-T 11330240-A-T ***
10682537-C-A ***
15157882-G-A 13045968-G-A ***
16478359-CAAA-C 14366479-CAAA-C 18×A***
25804867-T-G 23658720-T-G P1_b3 ***
10986826-C-A ***
14768087-C-CA 12656156-C-CA 12×A***
10682544-T-TTTGATTCTAA ***
14159529-C-CT 12038823-C-CT 10×T***
10682529-T-A ***
10682566-C-A ***
13456319-C-A,G 11300643-C-A,G ***
9859192-CAAA-C 10021583-CAAA-C 17×A***
16665713-C-A 14553833-C-A ***
2774663-CTTTTTT-C 2906622-CTTTTTT-C 18×T***
21554473-ATT-A,AT 19392587-ATT-A,AT 17×T***
56831693-C-A,T 4×TCCAT***
10987859-C-T ***
10682525-T-C ***
11643743-G-GCATTC ***
13469960-A-T 11314284-A-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 164249990160980849947989306
Used in age calculations990160980849947989306
Counts of SNPs2625
Variant counts last updated 2022-07-30 03:29:54.



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