Tree Position

R-M269 > L23 > L51 > P310 > L151 > S1194 > S1200

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
249898
26229943-C-CT 24083796-C-CT P1_Y1 11×TA*
24258360-T-TC 22112213-T-TC P3_b1 A*
28817097-C-A 26670950-C-A A*
28816603-G-T 26670456-G-T A*
18314058-C-T 16202178-C-T P6_Prx A*
22282489-G-T 20120603-G-T DYZ19 A*
25992051-G-A 23845904-G-A P1_Y1 A*
25599981-C-A 23453834-C-A P1_gr1 9×TA*
22455546-G-A 20293660-G-A DYZ19 A*
25857897-C-A 23711750-C-A P1_Y1 A*
26202558-A-C 24056411-A-C P1_Y1 A*
26311469-G-A 24165322-G-A P1_Y1 A*
26318788-C-T 24172641-C-T BY2475 P1_Y1 A*
8650088-G-T 8782047-G-T YYA*
19613073-A-G 17501193-A-G P5_Prx YA*
20031972-A-T 17920092-A-T P5_Prx A*
13848955-T-C 11728249-T-C FGC30863 +
22834232-C-G 20672346-C-G FGC30885 YY+
22476541-AC-A 20314655-AC-A DYZ19 +
21988077-C-A 19826191-C-A FGC30879 YY+
16365747-C-T 14253867-C-T FGC30865 YY+
23850291-G-T 21688405-G-T FGC30887 Y+
18033903-G-T 15922023-G-T FGC30870 YY+
22132056-A-G 19970170-A-G FGC30880 YY+
22461885-T-C 20299999-T-C FGC30883 DYZ19 +
22832230-T-C 20670344-T-C FGC30884 YY+
6951188-A-G 7083147-A-G FGC30855 YY+
6931100-C-G 7063059-C-G FGC30854 YY+
15466057-C-G 13354177-C-G FGC30864 YY+
18567606-A-G 16455726-A-G FGC30871 YY+
22473288-A-G 20311402-A-G FGC41240 DYZ19 +
22440801-G-T 20278915-G-T FGC41239 DYZ19 +
16580712-C-T 14468832-C-T FGC30867 YY+
7243024-G-C 7374983-G-C FGC41225 Y+
22302688-G-A 20140802-G-A A6029 DYZ19 +
19004343-C-T 16892463-C-T FGC30873 YY+
22263203-G-C 20101317-G-C FGC30882 DYZ19 +
23632403-A-T 21470517-A-T FGC30886 YY+
19214546-T-C 17102666-T-C FGC30874 YY+
16366050-T-C 14254170-T-C FGC41233 YY+
21826443-G-T 19664557-G-T FGC30878 YY+
10006398-C-T 10168789-C-T FGC30861 Y+
16494049-T-G 14382169-T-G FGC30866 YY+
8904690-C-G 9036649-C-G FGC30859 Y+
21300692-C-T 19138806-C-T FGC30877 YY+
8771799-A-C 8903758-A-C FGC30858 YY+
20827436-T-C 18665550-T-C FGC30875 P4_Gap +
20723192-T-A 18561306-T-A P4_Prx +
8440542-T-G 8572501-T-G FGC30857 YY+
9764347-G-T 9926738-G-T FGC30860 Y+
17288191-C-T 15176311-C-T FGC30869 YY+
16595277-C-T 14483397-C-T FGC30868 YY+
8203531-C-G 8335490-C-G FGC30856 YY+
28810392-AAAATG-A 26664245-AAAATG-A *
5471896-AAAAGAAAGAAAGAAAG-A 5603855-AAAAGAAAGAAAGAAAG-A 17×AAAG*
8650084-G-T 8782043-G-T YY*
13513153-A-C 11357477-A-C FGC41230 *
13464446-C-T 11308770-C-T *
22508574-T-C 20346688-T-C DYZ19 *
22346318-T-C 20184432-T-C DYZ19 *
19966688-AAAGAAG-A,AAAG 17854808-AAAGAAG-A,AAAG P5_Prx 26×AAG*
22264166-T-C 20102280-T-C DYZ19 *
8650084-G-GAAAT 8782043-G-GAAAT *
22580935-C-CT 20419049-C-CT 10×T*
24620350-T-TG 22474203-T-TG P3_t2 *
15102453-T-A 12990541-T-A **
15068858-A-C 12956949-A-C **
14556279-A-C 12444480-A-C **
14502388-TA-T 12390593-TA-T **
14526977-G-T 12415178-G-T **
15116282-A-G 13004369-A-G FGC41231 **
15038275-A-C 12926365-A-C **
14994426-TG-T 12882511-TG-T **
14963978-G-T 12852053-G-T **
14493038-G-T 12381235-G-T **
14635795-TC-T 12523864-TC-T **
14490203-C-A 12369472-C-A **
15179249-A-C 13067335-A-C **
14459911-C-A 12339184-C-A **
15212641-A-C 13100727-A-C **
15208223-C-A 13096309-C-A **
15202589-T-C 13090675-T-C **
14557661-C-A 12445862-C-A **
14479719-G-T 12358988-G-T **
15190099-G-T 13078185-G-T **
15179890-G-T 13067976-G-T **
15168979-A-C 13057065-A-C **
14589453-G-T 12477653-G-T **
15127992-T-C 13016079-T-C **
15127984-G-A 13016071-G-A **
15127983-T-C 13016070-T-C **
14489838-G-T 12369107-G-T **
15127977-C-T 13016064-C-T **
15127969-C-T 13016056-C-T **
15124073-A-G 13012160-A-G **
14948903-A-G 12836977-A-G **
14950566-C-A 12838640-C-A **
14911706-A-C 12799773-A-C **
14948872-T-G 12836946-T-G **
14540546-C-A 12428747-C-A **
14740645-C-A 12628713-C-A **
14738505-T-G 12626573-T-G **
15231950-T-C 13120036-T-C **
14722512-A-C 12610580-A-C **
14529473-A-G 12417674-A-G **
14538733-C-T 12426934-C-T **
14717776-C-A 12605844-C-A **
14600907-G-C 12489109-G-C **
14758844-C-A 12646913-C-A **
14701373-T-G 12589439-T-G **
14601914-C-A 12490116-C-A Y91803 **
14606280-TC-T 12494482-TC-T **
14700676-C-A 12588742-C-A **
14546820-G-T 12435021-G-T **
14552444-C-A 12440645-C-A **
14682605-C-A 12570671-C-A **
14748043-A-T 12636112-A-T **
14771274-C-A 12659343-C-A **
14933735-TC-T 12821800-TC-T **
14867270-T-G 12755340-T-G **
14682587-T-C 12570653-T-C **
14911129-A-G 12799196-A-G **
14911038-C-A 12799105-C-A **
14910911-G-T 12798978-G-T **
14556479-A-G 12444680-A-G **
14527155-C-A 12415356-C-A **
14527370-G-T 12415571-G-T **
14528974-G-C 12417175-G-C **
14600421-A-C 12488621-A-C **
14593114-A-C 12481314-A-C **
14867265-T-G 12755335-T-G **
14867209-C-A 12755279-C-A **
14859031-T-A 12747097-T-A **
14854276-G-A 12742342-G-A **
14845399-G-C 12733465-G-C **
14845365-A-C 12733431-A-C **
9980460-C-T 10142851-C-T **
15536501-G-T 13424621-G-T **
15271384-T-C 13159473-T-C **
16150740-C-A 14038860-C-A P8_Dst **
16320488-C-A 14208608-C-A **
16298373-A-T 14186493-A-T **
16245858-C-G 14133978-C-G **
16215249-G-T 14103369-G-T **
16214479-G-C 14102599-G-C **
16210919-C-A 14099039-C-A **
16180428-G-T 14068548-G-T **
16171949-T-G 14060069-T-G **
16171946-T-C 14060066-T-C **
16085465-G-A 13973585-G-A **
16394375-G-T 14282495-G-T **
16085454-T-A 13973574-T-A **
16085449-C-T 13973569-C-T **
16067137-CCA-C 13955257-CCA-C **
16065293-C-A 13953413-C-A **
16065273-C-A 13953393-C-A **
16051655-C-A 13939775-C-A **
16050425-T-G 13938545-T-G **
16050410-C-G 13938530-C-G **
16046191-T-C 13934311-T-C **
16339501-C-A 14227621-C-A **
16413486-A-C 14301606-A-C **
16041216-A-G 13929336-A-G **
16588132-C-T 14476252-C-T **
16914218-G-C 14802338-G-C **
16871272-C-T 14759392-C-T FGC41234 **
16841978-T-C 14730098-T-C **
16779050-A-C 14667170-A-C **
16765007-G-T 14653127-G-T **
16754986-C-A 14643106-C-A **
16668044-A-T 14556164-A-T **
16653464-C-A 14541584-C-A **
16617975-G-T 14506095-G-T **
16565984-C-A 14454104-C-A **
16413705-G-T 14301825-G-T **
16559644-C-A 14447764-C-A **
16553966-G-T 14442086-G-T **
16547577-C-A 14435697-C-A **
16538945-C-A 14427065-C-A **
16516467-G-T 14404587-G-T **
16493185-A-G 14381305-A-G **
16487943-C-A 14376063-C-A **
16484277-G-T 14372397-G-T **
16440991-C-A 14329111-C-A **
16428856-C-A 14316976-C-A **
16042799-C-A 13930919-C-A **
16036388-C-A 13924508-C-A **
15271392-A-AC 13159481-A-AC **
15374637-T-G 13262757-T-G **
15574975-C-A 13463095-C-A **
15558274-A-T 13446394-A-T **
14447925-G-C 12327198-G-C **
15536127-T-C 13424247-T-C **
15491863-TAG-T 13379983-TAG-T **
15468139-C-A 13356259-C-A FT149279 **
15442236-C-A 13330356-C-A **
15420354-C-A 13308474-C-A **
15410477-A-C 13298597-A-C **
15368800-C-A 13256920-C-A **
15623474-T-C 13511594-T-C **
15365313-T-C 13253433-T-C **
15361999-C-G 13250119-C-G **
15352750-C-A 13240869-C-A **
15346862-C-T 13234981-C-T **
15334514-T-C 13222632-T-C **
15305736-T-C 13193835-T-C **
15275656-G-T 13163745-G-T **
15271404-T-C 13159493-T-C **
15271397-T-A 13159486-T-A **
15616781-T-C 13504901-T-C **
15631179-A-C 13519299-A-C **
16035597-C-A 13923717-C-A **
15864313-G-T 13752433-G-T **
16034222-C-A 13922342-C-A **
16016475-C-G 13904595-C-G **
16004066-G-A 13892186-G-A **
15995575-C-G 13883695-C-G **
15975752-C-A 13863872-C-A **
15921303-T-C 13809423-T-C **
15916239-C-A 13804359-C-A **
15912111-G-T 13800231-G-T **
15901544-T-G 13789664-T-G **
15811348-C-A 13699468-C-A **
15655096-G-T 13543216-G-T **
15791097-C-A 13679217-C-A **
15776718-C-A 13664838-C-A **
15760828-G-T 13648948-G-T FT282073 **
15747459-C-T 13635579-C-T **
15745635-G-C 13633755-G-C **
15739414-T-G 13627534-T-G **
15725862-A-C 13613982-A-C **
15714268-A-C 13602388-A-C **
15684635-A-G 13572755-A-G **
15684630-G-T 13572750-G-T **
14451913-C-T 12331186-C-T **
14227794-G-T 12107088-G-T **
14430510-G-T 12309783-G-T **
10832305-G-A FT287121 **
10873682-C-A **
10856437-C-A **
10851795-C-T **
10845707-C-CA **
10838172-T-G **
10837428-T-G **
10832318-T-C **
10832313-T-C **
10832182-A-G **
10885082-C-A **
10828535-C-A **
10824239-C-A **
10821788-C-A **
10818682-A-T **
10818678-C-T **
10818657-A-T **
10813262-T-G **
10800990-C-G **
10797432-G-T **
10880328-A-C **
10887267-T-A **
10788648-C-A **
10984836-C-A **
13228395-G-A 11072719-G-A **
13228381-C-G 11072705-C-G **
13226563-C-A 11070887-C-A **
13218407-C-A 11062731-C-A **
13213311-C-A 11057635-C-A **
13206252-T-C 11050576-T-C **
11030138-C-G **
11000377-C-A **
10995426-T-C **
10983005-C-A **
10887395-C-A **
10982981-C-A **
10971289-CCATTT-C **
10947687-C-A **
10941664-C-A **
10941650-T-C **
10940381-C-CACTCA **
10940373-C-A **
10940355-C-A **
10918399-A-T **
10788649-A-T **
10776522-C-CGTGTTA **
13229910-C-A 11074234-C-A **
9509820-G-T 9672211-G-T **
9924495-G-A 10086886-G-A **
9832431-T-C 9994822-T-C **
9740221-G-C 9902612-G-C IR3_Prx **
9725215-C-A 9887606-C-A BY46469 IR3_Prx **
9716934-G-T 9879325-G-T IR3_Prx **
9544239-C-A 9706630-C-A IR3_Prx **
9544236-A-C 9706627-A-C IR3_Prx **
9544155-GT-G 9706546-GT-G IR3_Prx **
9461135-G-C 9623526-G-C **
9940638-T-C 10103029-T-C **
9436647-A-G 9599038-A-G **
9419010-C-A 9581401-C-A **
9410992-C-A 9573383-C-A **
9354423-C-A 9516814-C-A **
9162905-G-A 9325296-G-A **
9111540-T-C 9273931-T-C **
9091619-A-C 9254010-A-C **
9075418-G-T 9237809-G-T **
9063471-C-A 9225862-C-A **
9936364-C-A 10098755-C-A **
9966203-G-T 10128594-G-T **
10775055-C-A **
10665856-C-T **
10759930-C-A **
10751921-G-T **
10747415-G-T **
10747040-T-A **
10669564-T-A **
10669563-C-A **
10669543-C-A **
10666945-A-C **
10666933-C-A **
10660292-C-A **
9993570-T-G 10155961-T-G **
10657867-C-A **
10048357-T-C 10210748-T-C **
10048312-C-A 10210703-C-A **
10038469-C-A 10200860-C-A **
10035289-C-A 10197680-C-A **
10016668-C-A 10179059-C-A **
10012839-T-A 10175230-T-A **
10009526-C-A 10171917-C-A **
10002206-AT-A 10164597-AT-A **
13228727-C-A 11073051-C-A **
13236487-G-A 11080811-G-A **
14428242-C-A 12307517-C-A **
14071608-G-T 11950902-G-T **
14213230-G-A 12092524-G-A FT121745 **
14175513-A-C 12054807-A-C **
14161516-A-G 12040810-A-G **
14144087-G-T 12023381-G-T **
14105304-A-C 11984598-A-C **
14105272-T-A 11984566-T-A **
14100823-C-T 11980117-C-T **
14076609-C-T 11955903-C-T **
14065741-T-G 11945035-T-G **
14224425-C-A 12103719-C-A **
14051221-G-T 11930515-G-T **
14039358-C-A 11918652-C-A **
14002575-T-C 11881869-T-C **
14002567-A-C 11881861-A-C **
14000858-G-C 11880152-G-C **
13975945-G-T 11855239-G-T **
13973822-A-C 11853116-A-C **
13958412-A-T 11837706-A-T **
13898593-G-T 11777887-G-T **
14224355-C-G 12103649-C-G **
16932228-C-A 14820348-C-A **
13880215-A-G 11759509-A-G **
14313756-T-G 12193050-T-G **
14421355-C-A 12300630-C-A **
14408667-G-T 12287965-G-T **
14408643-T-C 12287941-T-C **
14408642-A-T 12287940-A-T **
14406738-C-G 12286036-C-G **
14384952-T-G 12264248-T-G **
14376316-T-G 12255612-T-G **
14376130-T-C 12255426-T-C **
14351162-T-C 12230457-T-C **
14300111-T-G 12179405-T-G **
14228562-C-A 12107856-C-A **
14293712-G-T 12173006-G-T **
14273450-C-A 12152744-C-A **
14269172-G-T 12148466-G-T **
14263323-G-A 12142617-G-A **
14263174-C-A 12142468-C-A **
14247424-G-T 12126718-G-T **
14242051-T-G 12121345-T-G **
14240496-G-T 12119790-G-T **
14229768-A-C 12109062-A-C **
13880654-C-A 11759948-C-A **
13858934-G-T 11738228-G-T **
13253333-C-A 11097657-C-A **
13467220-CA-C 11311544-CA-C **
13523546-C-A 11367870-C-A **
13523519-A-C 11367843-A-C **
13514597-C-A 11358921-C-A **
13491006-C-A 11335330-C-A **
13488006-G-A 11332330-G-A **
13477436-A-G 11321760-A-G **
13472315-C-A 11316639-C-A **
13468558-G-T 11312882-G-T **
13467206-G-A 11311530-G-A **
13550810-G-T 11395134-G-T **
13462495-C-A 11306819-C-A **
13453683-TATTCC-T 11298007-TATTCC-T 5×ATTCC**
13328976-G-C 11173300-G-C FGC30862 **
13316246-G-T 11160570-G-T **
13311143-C-A 11155467-C-A **
13305767-C-G 11150091-C-G **
13269695-C-T 11114019-C-T **
13255570-G-A 11099894-G-A **
13255097-C-A 11099421-C-A **
13527600-C-A 11371924-C-A **
13551313-C-T 11395637-C-T **
13821428-G-T 11700722-G-T **
11654623-G-C **
13821425-T-A 11700719-T-A **
13809940-A-T 11689234-A-T **
13803918-A-C 11683212-A-C **
13803140-C-A 11682434-C-A **
11672639-A-T **
11669602-T-G **
11666628-T-C **
11662978-G-T **
11658009-A-C **
11651580-G-T **
13610929-C-G 11455253-C-G **
11649316-G-T **
13726114-A-G 11570438-A-G **
13726099-T-G 11570423-T-G **
13654462-C-A 11498786-C-A **
13643545-C-T 11487869-C-T **
13642264-G-T 11486588-G-T **
13642237-T-G 11486561-T-G **
13637474-C-A 11481798-C-A **
13631246-T-C 11475570-T-C **
16931226-G-T 14819346-G-T **
17313466-A-C 15201586-A-C **
16941591-C-A 14829711-C-A **
22587142-A-G 20425256-A-G **
22811697-C-A 20649811-C-A **
22800264-G-T 20638378-G-T **
22793107-C-A 20631221-C-A **
22760716-C-A 20598830-C-A **
22734288-G-T 20572402-G-T **
22720444-A-C 20558558-A-C **
22662441-G-T 20500555-G-T **
22650992-C-T 20489106-C-T **
22584281-G-T 20422395-G-T **
22843805-G-T 20681919-G-T **
22564529-A-C 20402643-A-C **
22529578-T-G 20367692-T-G **
22518565-G-T 20356679-G-T **
22517127-G-C 20355241-G-C **
22447003-A-C 20285117-A-C DYZ19 **
22316391-C-A 20154505-C-A DYZ19 **
22301562-C-A 20139676-C-A DYZ19 **
22275000-C-T 20113114-C-T DYZ19 **
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3093642-C-G 3225601-C-G **
3286328-G-GC 3418287-G-GC **
3260109-T-G 3392068-T-G **
3111781-T-A 3243740-T-A **
3413249-G-T 3545208-G-T **
2985848-A-C 3117807-A-C **
3889869-G-C 4021828-G-C **
5274195-A-G 5406154-A-G **
3875965-C-A 4007924-C-A **
3866073-A-C 3998032-A-C **
3844340-G-T 3976299-G-T **
3814824-G-T 3946783-G-T **
2899540-T-G 3031499-T-G **
3779879-A-C 3911838-A-C **
3716205-C-A 3848164-C-A **
3599634-A-C 3731593-A-C **
3663869-A-C 3795828-A-C **
2902282-A-T 3034241-A-T **
2920887-A-G 3052846-A-G **
3640301-A-G 3772260-A-G **
3627217-C-A 3759176-C-A **
2940244-T-C 3072203-T-C **
3609761-G-T 3741720-G-T **
4471491-C-A 4603450-C-A **
4288244-G-T 4420203-G-T **
4480506-CA-C 4612465-CA-C **
4918448-C-A 5050407-C-A **
4788824-C-A 4920783-C-A **
4835656-C-A 4967615-C-A **
4862719-G-T 4994678-G-T **
24052429-G-T 21906282-G-T P3_b1 **
4873643-A-T 5005602-A-T **
4884753-A-C 5016712-A-C **
4888129-G-A 5020088-G-A FGC30853 **
4889894-C-A 5021853-C-A **
4504568-C-CT 4636527-C-CT **
4893487-C-A 5025446-C-A **
4900820-T-A 5032779-T-A **
4900845-A-T 5032804-A-T **
4900851-A-G 5032810-A-G **
13462195-A-T 11306519-A-T **
4920421-G-T 5052380-G-T **
4604505-C-T 4736464-C-T **
4920973-G-T 5052932-G-T **
4932604-A-C 5064563-A-C **
4968741-C-A 5100700-C-A **
10983043-C-T **
5008177-T-G 5140136-T-G **
5008179-G-T 5140138-G-T **
5154429-T-G 5286388-T-G **
5180900-A-C 5312859-A-C **
5211944-G-C 5343903-G-C **
5211986-C-T 5343945-C-T **
5215898-C-A 5347857-C-A **
5219204-C-A 5351163-C-A **
5243491-C-A 5375450-C-A **
5266528-G-T 5398487-G-T **
4748671-A-G 4880630-A-G **
3151582-G-T 3283541-G-T **
3102558-C-T 3234517-C-T **
7174370-C-A 7306329-C-A **
4547585-T-G 4679544-T-G **
14605195-C-A 12493397-C-A **
4586388-C-CTT 4718347-C-CTT 11×T**
4557757-A-C 4689716-A-C **
4534507-T-G 4666466-T-G **
4604467-C-G 4736426-C-G **
4586528-T-A 4718487-T-A **
58977398-G-C,T 56831251-G-C,T ***
10789368-T-TAAACC ***
10807249-A-T ***
13476708-C-T 11321032-C-T BY47077 FGC82352 ***
16328493-AT-A 14216613-AT-A 10×T***
10764541-TGCCATTTTCAC-T,TGCCATTTTAC ***
58977390-G-C 56831243-G-C ***
7666214-T-C 7798173-T-C ***
13457972-A-G 11302296-A-G ***
11030203-C-A ***
15222070-G-T 13110156-G-T ***
10754930-TCCTC-T ***
13866033-C-A 11745327-C-A ***
9906695-C-A 10069086-C-A ***
16572583-C-A 14460703-C-A ***
58977391-A-C 56831244-A-C ***
7703738-C-A 7835697-C-A FGC21216 ***
18471858-TAC-T 16359978-TAC-T P6_Dst 12×AC***
8877182-G-T 9009141-G-T ***
28799745-C-G 26653598-C-G ***
8342814-C-A 8474773-C-A ***
56847444-G-A ***
5059739-G-C 5191698-G-C ***
18076052-C-A 15964172-C-A ***
10808615-C-A ***
10754945-TC-T ***
10789413-T-C ***
8385891-C-A 8517850-C-A ***
23232677-C-A 21070791-C-A ***
23252386-G-T 21090500-G-T ***
10789390-C-A ***
58972891-T-G 56826744-T-G ***
28370013-TATAG-T,TAGAG 26223866-TATAG-T,TAGAG P1_gr2 ***
28479613-G-T 26333466-G-T ***
8417314-CGG-C 8549273-CGG-C 10×G***
10789384-C-T ***
58978576-T-C 56832429-T-C ***
16293539-AT-A,ATT 14181659-AT-A,ATT 16×T***
23280315-C-A 21118429-C-A ***
23293506-G-A 21131620-G-A FGC24379 ***
56832401-C-A,T ***
7717737-CTTCTTTCT-C 7849696-CTTCTTTCT-C 13×TTCT***
9772125-A-G 9934516-A-G ***
18194067-AGT-A 16082187-AGT-A ***
8636196-C-A 8768155-C-A ***
19053011-CTT-C 16941131-CTT-C 12×T***
7137200-C-CAT 7269159-C-CAT ***
13457740-C-A 11302064-C-A ***
16212696-G-A 14100816-G-A ***
58978541-G-T 56832394-G-T ***
23274482-A-AAG 21112596-A-AAG 13×AG***
8052184-C-A 8184143-C-A ***
13489604-C-G 11333928-C-G ***
10025779-C-A 10188170-C-A ***
10828781-C-A ***
58975097-A-ATTG 56828950-A-ATTG ***
13478767-G-A 11323091-G-A ***
16431229-CAAAA-C 14319349-CAAAA-C 15×A***
24504476-TC-T 22358329-TC-T ***
8618781-G-GT 8750740-G-GT 10×T***
11022900-T-A ***
15520169-GA-G 13408289-GA-G 10×A***
28787981-T-A 26641834-T-A ***
23098815-TCA-T 20936929-TCA-T ***
7166601-CATAT-C 7298560-CATAT-C 20×AT***
15740572-C-A 13628692-C-A ***
2717054-C-A 2849013-C-A ***
13476830-A-T 11321154-A-T ***
8024499-C-A 8156458-C-A F10016 Z33035 ***
27838310-T-G 25692163-T-G P1_Y2 ***
15865401-C-A 13753521-C-A ***
8874970-CTT-C,CTTT 9006929-CTT-C,CTTT 17×T***
23568589-CACACA-C 21406703-CACACA-C ***
19216526-G-A 17104646-G-A ***
16543512-G-A 14431632-G-A ***
28722235-C-A 26576088-C-A ***
8218270-C-A 8350229-C-A ***
7741972-G-A 7873931-G-A ***
15761906-G-T 13650026-G-T ***
13476806-C-G 11321130-C-G ***
58978535-T-TGCATC 56832388-T-TGCATC ***
7991445-C-A 8123404-C-A ***
7851851-C-A 7983810-C-A ***
8209368-C-A 8341327-C-A ***
8470395-GT-G 8602354-GT-G 10×T***
58972559-C-T 56826412-C-T ***
8624488-A-G 8756447-A-G ***
13602380-A-AGAAG 11446704-A-AGAAG 9×GAAG***
22147821-TTTCTCTTCTC-T 19985935-TTTCTCTTCTC-T ***
16301285-AT-A 14189405-AT-A 10×T***
26334878-C-A 24188731-C-A P1_Y1 ***
7933640-A-G 8065599-A-G ***
15814844-G-T 13702964-G-T ***
13457776-C-T 11302100-C-T ***
11022905-T-A ***
14965478-C-A 12853553-C-A ***
56829958-CACTCT-C ***
18199580-C-A 16087700-C-A ***
6402459-C-A 6534418-C-A ***
14069248-C-A 11948542-C-A ***
14869533-C-G 12757603-C-G ***
15320524-AAAG-A 13208630-AAAG-A 9×AAG***
14376520-C-A 12255816-C-A ***
20810696-CTTTT-C,CTTT 18648810-CTTTT-C,CTTT P4_Gap 16×T***
13833001-C-A 11712295-C-A ***
13811223-G-A 11690517-G-A ***
13811209-G-C 11690503-G-C ***
13811206-A-ATCTATTCAACTCGAT 11690500-A-ATCTATTCAACTCGAT ***
6631803-AT-A 6763762-AT-A ***
14841893-AT-A,ATT 12729960-AT-A,ATT 11×T***
21267445-C-A 19105559-C-A ***
18003854-A-T 15891974-A-T P7_Gap ***
13811083-G-C 11690377-G-C ***
6734852-C-CT 6866811-C-CT 10×T***
21329550-C-G 19167664-C-G ***
15029584-C-A 12917672-C-A ***
8505584-ATT-A 8637543-ATT-A 14×T***
6755702-C-A 6887661-C-A ***
6765498-C-A 6897457-C-A ***
14028982-C-A 11908276-C-A ***
15081336-G-A 12969426-G-A ***
22793132-C-A 20631246-C-A ***
18395210-C-A 16283330-C-A P6_Gap ***
14176642-G-A 12055936-G-A ***
56833502-CCACTA-CCACTT,T ***
10683272-C-A ***
18904732-C-A 16792852-C-A ***
7382464-C-A 7514423-C-A ***
18947875-C-A 16835995-C-A ***
13643765-C-A 11488089-C-A ***
14447660-C-A 12326933-C-A ***
5180665-T-C 5312624-T-C ***
13446747-T-A 11291071-T-A ***
18793475-G-A 16681595-G-A ***
13447101-ACT-A 11291425-ACT-A ***
5796530-C-A 5928489-C-A ***
19135039-G-T 17023159-G-T ***
10683303-C-T ***
19216520-G-A 17104640-G-A ***
19477412-G-T 17365532-G-T ***
19216521-A-T 17104641-A-T ***
3435984-C-A 3567943-C-A ***
14348835-C-A 12228130-C-A ***
14322957-C-A 12202251-C-A ***
18675834-C-A 16563954-C-A ***
19290742-C-A 17178862-C-A ***
14713070-A-G 12601137-A-G ***
5957111-C-T 6089070-C-T ***
11030250-C-A ***
19407710-C-A 17295830-C-A ***
13447095-TCTA-T 11291419-TCTA-T ***
28655980-C-A 26509833-C-A ***
10845727-A-G ***
21583891-C-A 19422005-C-A ***
16309571-CAAA-C 14197691-CAAA-C 17×A***
10682516-C-G ***
7193761-C-A 7325720-C-A ***
9029755-GATGGAGTTTCACT-G 9192146-GATGGAGTTTCACT-G ***
7206700-C-A 7338659-C-A ***
17678621-CTT-C,CT 15566741-CTT-C,CT 26×T***
8073523-C-A 8205482-C-A ***
2810366-AT-A,ATT 2942325-AT-A,ATT 23×T***
13850186-C-A 11729480-C-A FT451874 ***
13485631-G-T 11329955-G-T ***
5957133-A-G 6089092-A-G ***
15382749-C-A 13270869-C-A ***
10895902-G-T ***
10682537-C-CACTCA ***
6144430-CA-C 6276389-CA-C IR3_Dst 13×A***
22204182-C-A 20042296-C-A ***
10980761-C-T ***
10754935-TC-T ***
22890019-A-G 20728133-A-G ***
22890052-C-A 20728166-C-A ***
56831929-ACTCCA-A,ACTCCT ***
23080033-C-A 20918147-C-A ***
16929894-C-A 14818014-C-A ***
16921841-C-A 14809961-C-A ***
15662513-C-A 13550633-C-A ***
15239494-C-A 13127580-C-A ***
16791088-C-A 14679208-C-A ***
23138461-C-T 20976575-C-T ***
7246174-CA-C,CAA 7378133-CA-C,CAA 15×A***
7125105-C-A 7257064-C-A ***
17703228-C-A 15591348-C-A ***
10980762-T-C ***
11030246-C-G ***
6880988-C-A 7012947-C-A ***
17579793-C-A 15467913-C-A ***
21717748-C-A 19555862-C-A ***
6957147-A-T 7089106-A-T ***
13489778-T-A,G 11334102-T-A,G ***
13481404-A-G 11325728-A-G ***
13480230-G-A 11324554-G-A ***
13477391-C-A 11321715-C-A ***
21894633-CAAA-C 19732747-CAAA-C 15×A***
17361058-CAAA-C 15249178-CAAA-C 25×A***
15229554-C-A 13117640-C-A ***
26463097-CT-C 24316950-CT-C P1_Y1 36×T***
10683300-A-G ***
13446531-ATTCCATTCCATTC-A,ACTC 11290855-ATTCCATTCCATTC-A,ACTC ***
13467154-TC-T 11311478-TC-T ***
22036969-T-C 19875083-T-C ***
13459563-TC-T 11303887-TC-T ***
13458656-C-A 11302980-C-A ***
17463214-C-A 15351334-C-A ***
22093131-A-G 19931245-A-G ***
15279206-GT-G,GTT 13167305-GT-G,GTT 13×T***
13457735-C-A 11302059-C-A ***
22147509-T-C 19985623-T-C ***
13485913-A-T 11330237-A-T ***
17318735-C-A 15206855-C-A ***
9903389-GA-G 10065780-GA-G 11×A***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 249898915228374730237405697
Used in age calculations915228374730237405697
Counts of SNPs2927
Variant counts last updated 2022-07-30 03:29:53.



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