Smargiassi
BigY2: N163675MDKA Birth:
ItalyTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 N163675 |
|---|---|---|---|---|---|---|---|
| hg19:Y:19673135-C-G hg38:Y:17561255-C-G | P5_Prx | A* | |||||
| hg19:Y:19692952-C-T hg38:Y:17581072-C-T | P5_Prx | A* | |||||
| hg19:Y:19894837-A-T hg38:Y:17782957-A-T | P5_Prx | A* | |||||
| hg19:Y:24346231-T-C hg38:Y:22200084-T-C | P3_t1 | A* | |||||
| hg19:Y:25954739-C-T hg38:Y:23808592-C-T | P1_Y1 | A* | |||||
| hg19:Y:26118544-C-CTT hg38:Y:23972397-C-CTT | P1_Y1 | A* | |||||
| hg19:Y:28817304-T-C hg38:Y:26671157-T-C | A* | ||||||
| hg19:Y:9813700-A-G hg38:Y:9976091-A-G | Z17171 | Y | Y | + | |||
| hg19:Y:9813705-GGGGC-G hg38:Y:9976096-GGGGC-G | + | ||||||
| hg19:Y:8384955-T-C hg38:Y:8516914-T-C | BY72203 | Y | + | ||||
| hg19:Y:8697022-T-A hg38:Y:8828981-T-A | BY75262 | Y | Y | + | |||
| hg19:Y:9016719-G-A hg38:Y:9179110-G-A | BY77366 | Y | + | ||||
| hg19:Y:9466840-G-C hg38:Y:9629231-G-C | BY79614 | + | |||||
| hg19:Y:9813706-G-A hg38:Y:9976097-G-A | BY42843 | Y | Y | + | |||
| hg19:Y:9848663-C-T hg38:Y:10011054-C-T | BY42850 | Y | Y | + | |||
| hg19:Y:13452964-CATTCTATTGCATTCT-C hg38:Y:11297288-CATTCTATTGCATTCT-C | + | ||||||
| hg19:Y:14664560-C-T hg38:Y:12552626-C-T | BY97071 | Y | Y | + | |||
| hg19:Y:15338080-T-C hg38:Y:13226198-T-C | BY100929 | Y | Y | + | |||
| hg19:Y:15555169-C-T hg38:Y:13443289-C-T | BY102503 | Y | Y | + | |||
| hg19:Y:17414934-C-A hg38:Y:15303054-C-A | BY114595 | Y | Y | + | |||
| hg19:Y:17675954-G-T hg38:Y:15564074-G-T | BY116571 | Y | Y | + | |||
| hg19:Y:18644075-A-G hg38:Y:16532195-A-G | BY122808 | Y | Y | + | |||
| hg19:Y:18678245-G-C hg38:Y:16566365-G-C | BY123059 | Y | Y | + | |||
| hg19:Y:18699964-C-T hg38:Y:16588084-C-T | BY123237 | Y | Y | + | |||
| hg19:Y:18715004-G-C hg38:Y:16603124-G-C | BY123352 | Y | Y | + | |||
| hg19:Y:18760155-A-G hg38:Y:16648275-A-G | BY55104 | Y | Y | + | |||
| hg19:Y:18994259-G-T hg38:Y:16882379-G-T | BY125337 | Y | Y | + | |||
| hg19:Y:19012176-T-G hg38:Y:16900296-T-G | BY125548 | Y | Y | + | |||
| hg19:Y:21779986-C-T hg38:Y:19618100-C-T | BY135407 | Y | Y | + | |||
| hg19:Y:21818354-G-A hg38:Y:19656468-G-A | BY135708 | Y | Y | + | |||
| hg19:Y:22287894-C-A hg38:Y:20126008-C-A | BY216197 | DYZ19 | + | ||||
| hg19:Y:22287895-C-A hg38:Y:20126009-C-A | BY216198 | DYZ19 | + | ||||
| hg19:Y:22625905-T-C hg38:Y:20464019-T-C | BY139595 | Y | Y | + | |||
| hg19:Y:22834947-T-C hg38:Y:20673061-T-C | BY141155 | Y | Y | + | |||
| hg19:Y:23472565-C-G hg38:Y:21310679-C-G | BY145530 | Y | Y | + | |||
| hg19:Y:23534970-CA-C hg38:Y:21373084-CA-C | + | ||||||
| hg19:Y:27860967-CT-C hg38:Y:25714820-CT-C | P1_Y2 | 5×TTG | + | ||||
| hg19:Y:28698364-T-C hg38:Y:26552217-T-C | BY150895 | + | |||||
| hg38:Y2:13661-T-A | + | ||||||
| hg19:Y:22319530-C-A hg38:Y:20157644-C-A | DYZ19 | * | |||||
| hg19:Y:22277303-A-T hg38:Y:20115417-A-T | DYZ19 | * | |||||
| hg19:Y:13453294-C-A hg38:Y:11297618-C-A | ** | ||||||
| hg19:Y:26170457-A-C hg38:Y:24024310-A-C | BY23315 | P1_Y1 | ** | ||||
| hg19:Y:28813964-T-A hg38:Y:26667817-T-A | BY33572 | ** | |||||
| hg19:Y:59030791-G-GAA hg38:Y:56884644-G-GAA | 10×A | ** | |||||
| hg19:Y:9956228-G-A hg38:Y:10118619-G-A | FT262758 | ** | |||||
| hg19:Y:15971225-CTTTTT-C hg38:Y:13859345-CTTTTT-C | 18×T | ** | |||||
| hg19:Y:5170272-A-C hg38:Y:5302231-A-C | ** | ||||||
| hg19:Y:17503917-G-T hg38:Y:15392037-G-T | FGC38025 | ** | |||||
| hg19:Y:24458709-C-A hg38:Y:22312562-C-A | ** | ||||||
| hg19:Y:24283301-C-A hg38:Y:22137154-C-A | P3_t1 | ** | |||||
| hg19:Y:22360148-T-G hg38:Y:20198262-T-G | DYZ19 | ** | |||||
| hg19:Y:13203894-G-A hg38:Y:11048218-G-A | S13661 | ** | |||||
| hg19:Y:4256755-T-A hg38:Y:4388714-T-A | ** | ||||||
| hg19:Y:3846855-C-A hg38:Y:3978814-C-A | ** | ||||||
| hg19:Y:14100311-C-A hg38:Y:11979605-C-A | ** | ||||||
| hg38:Y:11004942-A-T | ** | ||||||
| hg38:Y:10815708-T-C | ** | ||||||
| hg38:Y:10760345-CACTGT-C | ** | ||||||
| hg19:Y:10013892-T-C hg38:Y:10176283-T-C | ** | ||||||
| hg38:Y:11676643-G-T | DYZ17 | ** | |||||
| hg38:Y:11676646-A-G | DYZ17 | ** | |||||
| hg38:Y:11676660-T-C | DYZ17 | ** | |||||
| hg38:Y:11676669-A-T | DYZ17 | ** | |||||
| hg19:Y:28771530-C-A hg38:Y:26625383-C-A | FT461436 | ** | |||||
| hg19:Y:24363631-CTCTT-C hg38:Y:22217484-CTCTT-C | ** | ||||||
| hg38:Y:10745162-C-A | ** | ||||||
| hg19:Y:3279760-C-A hg38:Y:3411719-C-A | ** | ||||||
| hg19:Y:15449920-C-A hg38:Y:13338040-C-A | ** | ||||||
| hg19:Y:7240897-C-A hg38:Y:7372856-C-A | ** | ||||||
| hg19:Y:8159002-C-A hg38:Y:8290961-C-A | ** | ||||||
| hg19:Y:17714824-C-A hg38:Y:15602944-C-A | ** | ||||||
| hg19:Y:17929013-C-A hg38:Y:15817133-C-A | ** | ||||||
| hg19:Y:13908585-A-C hg38:Y:11787879-A-C | ** | ||||||
| hg38:Y:10965514-C-T | ** | ||||||
| hg19:Y:5785679-G-T hg38:Y:5917638-G-T | ** | ||||||
| hg38:Y:10887992-C-T | ** | ||||||
| hg19:Y:3275360-G-T hg38:Y:3407319-G-T | ** | ||||||
| hg19:Y:15971508-A-C hg38:Y:13859628-A-C | ** | ||||||
| hg19:Y:7152746-C-A hg38:Y:7284705-C-A | ** | ||||||
| hg38:Y:10785172-T-C | ** | ||||||
| hg19:Y:13943141-C-A hg38:Y:11822435-C-A | ** | ||||||
| hg38:Y:56850357-A-G | ** | ||||||
| hg19:Y:27971766-C-A hg38:Y:25825619-C-A | P1_Y2 | 4×AAAGA | ** | ||||
| hg38:Y:11016379-T-C | ** | ||||||
| hg19:Y:14607969-C-G hg38:Y:12496171-C-G | ** | ||||||
| hg38:Y:10752914-C-G | ** | ||||||
| hg19:Y:17306653-A-C hg38:Y:15194773-A-C | ** | ||||||
| hg19:Y:27644021-G-A hg38:Y:25497874-G-A | BY3250 | P1_Y2 | ** | ||||
| hg19:Y:16003918-C-A hg38:Y:13892038-C-A | ** | ||||||
| hg38:Y:10938601-T-C | ** | ||||||
| hg38:Y:10934728-T-C | ** | ||||||
| hg38:Y:10808573-T-C | ** | ||||||
| hg38:Y:10759782-C-A | ** | ||||||
| hg19:Y:20603937-G-T hg38:Y:18442051-G-T | P5_Dst | ** | |||||
| hg38:Y:11004876-A-C | ** | ||||||
| hg38:Y:11004894-T-C | ** | ||||||
| hg38:Y:11004902-G-A | ** | ||||||
| hg38:Y:11004934-C-A | ** | ||||||
| hg38:Y:11004951-C-T | ** | ||||||
| hg19:Y:6435129-C-A hg38:Y:6567088-C-A | ** | ||||||
| hg19:Y:16989109-A-C hg38:Y:14877229-A-C | ** | ||||||
| hg38:Y:10965521-C-A | ** | ||||||
| hg38:Y:11004856-A-T | ** | ||||||
| hg38:Y:11004881-CCCCAC-A | ** | ||||||
| hg38:Y:11004929-C-T | ** | ||||||
| hg38:Y:11004938-C-T | ** | ||||||
| hg19:Y:3696582-G-T hg38:Y:3828541-G-T | ** | ||||||
| hg38:Y:56858350-AAGAAAGAAAG-A | ** | ||||||
| hg19:Y:28818019-A-C hg38:Y:26671872-A-C | ** | ||||||
| hg38:Y:11031458-T-C | ** | ||||||
| hg19:Y:22651050-C-A hg38:Y:20489164-C-A | ** | ||||||
| hg38:Y:11663431-TGAATG-T | DYZ17 | ** | |||||
| hg19:Y:28808637-A-T hg38:Y:26662490-A-T | ** | ||||||
| hg19:Y:14546704-C-A hg38:Y:12434905-C-A | ** | ||||||
| hg38:Y:10788883-C-A | ** | ||||||
| hg38:Y:10861008-C-A | ** | ||||||
| hg38:Y:11038241-C-A | ** | ||||||
| hg38:Y:10844906-T-A | ** | ||||||
| hg19:Y:19113723-TAAAA-T hg38:Y:17001843-TAAAA-T | 28×A | ** | |||||
| hg19:Y:20101765-G-T hg38:Y:17989885-G-T | P5_Dst | ** | |||||
| hg19:Y:15185232-C-A hg38:Y:13073318-C-A | ** | ||||||
| hg19:Y:8109894-T-G hg38:Y:8241853-T-G | ** | ||||||
| hg38:Y:10815703-A-C | ** | ||||||
| hg38:Y:10763471-G-C | ** | ||||||
| hg38:Y:10763480-A-C | ** | ||||||
| hg19:Y:19937284-G-GC hg38:Y:17825404-G-GC | P5_Prx | 13×C | ** | ||||
| hg38:Y:10986428-C-A | ** | ||||||
| hg38:Y:10834183-C-T | ** | ||||||
| hg19:Y:17950778-C-A hg38:Y:15838898-C-A | ** | ||||||
| hg19:Y:18539230-C-A hg38:Y:16427350-C-A | ** | ||||||
| hg38:Y:10889704-C-A | ** | ||||||
| hg19:Y:16053519-C-A hg38:Y:13941639-C-A | ** | ||||||
| hg19:Y:13937954-T-C hg38:Y:11817248-T-C | ** | ||||||
| hg19:Y:19223111-C-A hg38:Y:17111231-C-A | ** | ||||||
| hg38:Y:10870810-A-T | ** | ||||||
| hg19:Y:21297271-G-T hg38:Y:19135385-G-T | ** | ||||||
| hg19:Y:13475620-C-A hg38:Y:11319944-C-A | ** | ||||||
| hg38:Y:10861501-G-T | ** | ||||||
| hg19:Y:21095810-C-A hg38:Y:18933924-C-A | ** | ||||||
| hg19:Y:17115125-C-A hg38:Y:15003245-C-A | ** | ||||||
| hg19:Y:15866268-CAAAA-C hg38:Y:13754388-CAAAA-C | 43×A | ** | |||||
| hg38:Y:10780594-C-A | ** | ||||||
| hg38:Y:10887963-A-G | ** | ||||||
| hg38:Y:11004860-G-T | ** | ||||||
| hg19:Y:14050678-C-A hg38:Y:11929972-C-A | ** | ||||||
| hg38:Y:56829922-T-C | ** | ||||||
| hg19:Y:6012958-C-A hg38:Y:6144917-C-A | ** | ||||||
| hg38:Y:10887973-A-G | ** | ||||||
| hg19:Y:22281787-T-A hg38:Y:20119901-T-A | DYZ19 | ** | |||||
| hg19:Y:4561432-C-A hg38:Y:4693391-C-A | ** | ||||||
| hg19:Y:19410093-C-A hg38:Y:17298213-C-A | ** | ||||||
| hg19:Y:7097966-C-A hg38:Y:7229925-C-A | ** | ||||||
| hg38:Y:56830090-C-A | ** | ||||||
| hg38:Y:10663220-C-A | ** | ||||||
| hg19:Y:19701524-A-C hg38:Y:17589644-A-C | P5_Prx | ** | |||||
| hg19:Y:4223436-A-G hg38:Y:4355395-A-G | ** | ||||||
| hg19:Y:8761970-C-A hg38:Y:8893929-C-A | ** | ||||||
| hg19:Y:13258761-C-A hg38:Y:11103085-C-A | ** | ||||||
| hg19:Y:15786137-A-G hg38:Y:13674257-A-G | ** | ||||||
| hg19:Y:17511819-C-A hg38:Y:15399939-C-A | ** | ||||||
| hg19:Y:4925177-C-A hg38:Y:5057136-C-A | ** | ||||||
| hg38:Y:11019476-C-A | ** | ||||||
| hg19:Y:28500005-C-A hg38:Y:26353858-C-A | ** | ||||||
| hg19:Y:9956231-T-C hg38:Y:10118622-T-C | ** | ||||||
| hg19:Y:5829301-C-A hg38:Y:5961260-C-A | ** | ||||||
| hg38:Y:10999889-C-G | ** | ||||||
| hg19:Y:2790314-T-TA hg38:Y:2922273-T-TA | ** | ||||||
| hg19:Y:2845221-CAAAAAAAAAAAAAAAAAAAAAA-C hg38:Y:2977180-CAAAAAAAAAAAAAAAAAAAAAA-C | 38×A | ** | |||||
| hg19:Y:3272680-C-A hg38:Y:3404639-C-A | ** | ||||||
| hg19:Y:3287795-C-A hg38:Y:3419754-C-A | ** | ||||||
| hg19:Y:3407813-C-A hg38:Y:3539772-C-A | ** | ||||||
| hg19:Y:3850285-C-A hg38:Y:3982244-C-A | ** | ||||||
| hg19:Y:4051425-C-A hg38:Y:4183384-C-A | ** | ||||||
| hg19:Y:4123856-A-G hg38:Y:4255815-A-G | ** | ||||||
| hg19:Y:4195224-C-A hg38:Y:4327183-C-A | ** | ||||||
| hg19:Y:4241368-G-T hg38:Y:4373327-G-T | ** | ||||||
| hg19:Y:4310638-C-A hg38:Y:4442597-C-A | ** | ||||||
| hg19:Y:4365942-G-T hg38:Y:4497901-G-T | ** | ||||||
| hg19:Y:4368378-G-T hg38:Y:4500337-G-T | ** | ||||||
| hg19:Y:4377822-C-A hg38:Y:4509781-C-A | ** | ||||||
| hg19:Y:4448728-A-C hg38:Y:4580687-A-C | ** | ||||||
| hg19:Y:4448740-G-T hg38:Y:4580699-G-T | ** | ||||||
| hg19:Y:4513082-G-T hg38:Y:4645041-G-T | ** | ||||||
| hg19:Y:4540743-C-A hg38:Y:4672702-C-A | ** | ||||||
| hg19:Y:4919494-C-A hg38:Y:5051453-C-A | ** | ||||||
| hg19:Y:5135238-CTT-C hg38:Y:5267197-CTT-C | 26×T | ** | |||||
| hg19:Y:5190734-G-A hg38:Y:5322693-G-A | ** | ||||||
| hg19:Y:5220255-C-A hg38:Y:5352214-C-A | ** | ||||||
| hg19:Y:5358992-C-A hg38:Y:5490951-C-A | ** | ||||||
| hg19:Y:5412475-C-A hg38:Y:5544434-C-A | ** | ||||||
| hg19:Y:5601824-C-A hg38:Y:5733783-C-A | ** | ||||||
| hg19:Y:5728142-A-G hg38:Y:5860101-A-G | ** | ||||||
| hg19:Y:5824835-C-A hg38:Y:5956794-C-A | ** | ||||||
| hg19:Y:5860851-A-C hg38:Y:5992810-A-C | ** | ||||||
| hg19:Y:6206101-G-T hg38:Y:6338060-G-T | IR3_Dst | ** | |||||
| hg19:Y:6436229-G-T hg38:Y:6568188-G-T | ** | ||||||
| hg19:Y:6580353-C-A hg38:Y:6712312-C-A | ** | ||||||
| hg19:Y:6648147-C-A hg38:Y:6780106-C-A | ** | ||||||
| hg19:Y:7015489-C-A hg38:Y:7147448-C-A | ** | ||||||
| hg19:Y:7159227-T-G hg38:Y:7291186-T-G | ** | ||||||
| hg19:Y:7235316-T-A hg38:Y:7367275-T-A | ** | ||||||
| hg19:Y:7423764-C-A hg38:Y:7555723-C-A | ** | ||||||
| hg19:Y:8379486-AC-A hg38:Y:8511445-AC-A | ** | ||||||
| hg19:Y:8816906-T-C hg38:Y:8948865-T-C | ** | ||||||
| hg19:Y:9046998-G-T hg38:Y:9209389-G-T | ** | ||||||
| hg19:Y:9564529-C-T hg38:Y:9726920-C-T | IR3_Prx | ** | |||||
| hg19:Y:9597016-AAAAGGTGAA-C hg38:Y:9759407-AAAAGGTGAA-C | IR3_Prx | ** | |||||
| hg19:Y:9891153-G-A hg38:Y:10053544-G-A | ** | ||||||
| hg19:Y:9940000-C-A hg38:Y:10102391-C-A | ** | ||||||
| hg19:Y:9942971-C-A hg38:Y:10105362-C-A | ** | ||||||
| hg19:Y:9943881-G-T hg38:Y:10106272-G-T | ** | ||||||
| hg19:Y:9956185-C-CT hg38:Y:10118576-C-CT | ** | ||||||
| hg19:Y:9956199-A-G hg38:Y:10118590-A-G | ** | ||||||
| hg19:Y:9956202-G-C hg38:Y:10118593-G-C | ** | ||||||
| hg19:Y:9956202-GAA-G hg38:Y:10118593-GAA-G | ** | ||||||
| hg19:Y:9956220-A-G hg38:Y:10118611-A-G | ** | ||||||
| hg19:Y:9956233-C-A hg38:Y:10118624-C-A | ** | ||||||
| hg38:Y:10652918-G-GCCATTCCATT | ** | ||||||
| hg38:Y:10669616-G-T | ** | ||||||
| hg38:Y:10677430-C-A | ** | ||||||
| hg38:Y:10677781-CTGAAT-C | ** | ||||||
| hg38:Y:10687217-C-A | ** | ||||||
| hg38:Y:10693176-C-T | ** | ||||||
| hg38:Y:10745164-G-C | ** | ||||||
| hg38:Y:10745169-A-G | ** | ||||||
| hg38:Y:10759816-A-G | ** | ||||||
| hg38:Y:10759823-T-A | ** | ||||||
| hg38:Y:10774237-T-C | ** | ||||||
| hg38:Y:10776159-GCACTC-G | ** | ||||||
| hg38:Y:10785157-C-G | ** | ||||||
| hg38:Y:10785166-A-T | ** | ||||||
| hg38:Y:10785183-CATTCT-C | ** | ||||||
| hg38:Y:10790283-C-G | ** | ||||||
| hg38:Y:10796676-C-CCCCTG | ** | ||||||
| hg38:Y:10796678-A-AGTCGGGTTGT | ** | ||||||
| hg38:Y:10813987-C-A | ** | ||||||
| hg38:Y:10815725-G-C | ** | ||||||
| hg38:Y:10815743-G-C | ** | ||||||
| hg38:Y:10822906-C-T | ** | ||||||
| hg38:Y:10842264-C-A | ** | ||||||
| hg38:Y:10851733-TATTCC-T | ** | ||||||
| hg38:Y:10870786-A-C | ** | ||||||
| hg38:Y:10870792-G-C | ** | ||||||
| hg38:Y:10870794-A-C | ** | ||||||
| hg38:Y:10870809-C-T | ** | ||||||
| hg38:Y:10870814-C-T | ** | ||||||
| hg38:Y:10877875-C-A | ** | ||||||
| hg38:Y:10879643-C-T | ** | ||||||
| hg38:Y:10883591-C-A | ** | ||||||
| hg38:Y:10885278-C-A | ** | ||||||
| hg38:Y:10935005-T-A | ** | ||||||
| hg38:Y:10938583-C-G | ** | ||||||
| hg38:Y:10938586-T-G | ** | ||||||
| hg38:Y:10938591-T-C | ** | ||||||
| hg38:Y:10938603-C-G | ** | ||||||
| hg38:Y:10940909-T-A | ** | ||||||
| hg38:Y:10951400-C-A | ** | ||||||
| hg38:Y:10965453-C-A | ** | ||||||
| hg38:Y:10965483-C-T | ** | ||||||
| hg38:Y:10965489-CATCCCATTGT-C | ** | ||||||
| hg38:Y:10968822-G-T | ** | ||||||
| hg38:Y:10969389-A-T | ** | ||||||
| hg38:Y:10982165-A-T | ** | ||||||
| hg38:Y:11005337-C-A | ** | ||||||
| hg38:Y:11009444-G-C | ** | ||||||
| hg38:Y:11016354-G-A | ** | ||||||
| hg38:Y:11021615-T-G | ** | ||||||
| hg38:Y:11022303-T-G | ** | ||||||
| hg38:Y:11029978-C-A | ** | ||||||
| hg38:Y:11031772-A-T | ** | ||||||
| hg19:Y:13218730-C-A hg38:Y:11063054-C-A | ** | ||||||
| hg19:Y:13224668-C-A hg38:Y:11068992-C-A | ** | ||||||
| hg19:Y:13228003-G-A hg38:Y:11072327-G-A | ** | ||||||
| hg19:Y:13301482-C-T hg38:Y:11145806-C-T | ** | ||||||
| hg19:Y:13522879-C-A hg38:Y:11367203-C-A | ** | ||||||
| hg19:Y:13528459-C-A hg38:Y:11372783-C-A | ** | ||||||
| hg19:Y:13592391-A-C hg38:Y:11436715-A-C | ** | ||||||
| hg19:Y:13592580-C-A hg38:Y:11436904-C-A | ** | ||||||
| hg19:Y:13626770-C-A hg38:Y:11471094-C-A | ** | ||||||
| hg19:Y:13712212-C-G hg38:Y:11556536-C-G | DYZ17 | ** | |||||
| hg38:Y:11657080-A-G | DYZ17 | ** | |||||
| hg38:Y:11663726-T-A | DYZ17 | ** | |||||
| hg38:Y:11676691-G-A | DYZ17 | ** | |||||
| hg38:Y:11676692-A-C | DYZ17 | ** | |||||
| hg19:Y:13894269-T-G hg38:Y:11773563-T-G | ** | ||||||
| hg19:Y:13943103-C-A hg38:Y:11822397-C-A | ** | ||||||
| hg19:Y:13974693-CTTTTTTTT-C hg38:Y:11853987-CTTTTTTTT-C | 17×T | ** | |||||
| hg19:Y:14191812-A-C hg38:Y:12071106-A-C | ** | ||||||
| hg19:Y:14352307-C-A hg38:Y:12231602-C-A | ** | ||||||
| hg19:Y:14355629-G-A hg38:Y:12234924-G-A | ** | ||||||
| hg38:Y:12377531-C-A | ** | ||||||
| hg19:Y:14527635-A-C hg38:Y:12415836-A-C | ** | ||||||
| hg19:Y:14571350-A-C hg38:Y:12459550-A-C | ** | ||||||
| hg19:Y:14611524-T-C hg38:Y:12499730-T-C | ** | ||||||
| hg19:Y:14627148-A-G hg38:Y:12515216-A-G | ** | ||||||
| hg19:Y:14675142-A-C hg38:Y:12563208-A-C | ** | ||||||
| hg19:Y:14962542-G-T hg38:Y:12850617-G-T | ** | ||||||
| hg19:Y:14994096-C-A hg38:Y:12882181-C-A | ** | ||||||
| hg19:Y:15011663-C-A hg38:Y:12899751-C-A | ** | ||||||
| hg19:Y:15070444-CT-C hg38:Y:12958535-CT-C | ** | ||||||
| hg19:Y:15103381-G-T hg38:Y:12991469-G-T | ** | ||||||
| hg19:Y:15106660-C-T hg38:Y:12994748-C-T | ** | ||||||
| hg19:Y:15116504-C-T hg38:Y:13004591-C-T | ** | ||||||
| hg19:Y:15201659-A-G hg38:Y:13089745-A-G | FT180275 | ** | |||||
| hg19:Y:15412287-A-C hg38:Y:13300407-A-C | ** | ||||||
| hg19:Y:15490545-C-A hg38:Y:13378665-C-A | ** | ||||||
| hg19:Y:15600063-C-A hg38:Y:13488183-C-A | ** | ||||||
| hg19:Y:15947975-G-T hg38:Y:13836095-G-T | ** | ||||||
| hg19:Y:16008032-C-A hg38:Y:13896152-C-A | ** | ||||||
| hg19:Y:16020926-T-A hg38:Y:13909046-T-A | ** | ||||||
| hg19:Y:16171625-C-A hg38:Y:14059745-C-A | ** | ||||||
| hg19:Y:16180404-G-A hg38:Y:14068524-G-A | ** | ||||||
| hg19:Y:16270962-G-A hg38:Y:14159082-G-A | ** | ||||||
| hg19:Y:16467002-T-G hg38:Y:14355122-T-G | ** | ||||||
| hg19:Y:16467137-C-A hg38:Y:14355257-C-A | ** | ||||||
| hg19:Y:16503594-G-C hg38:Y:14391714-G-C | ** | ||||||
| hg19:Y:16623469-A-C hg38:Y:14511589-A-C | ** | ||||||
| hg19:Y:16689822-G-A hg38:Y:14577942-G-A | ** | ||||||
| hg19:Y:16926184-C-A hg38:Y:14814304-C-A | ** | ||||||
| hg19:Y:17095371-A-C hg38:Y:14983491-A-C | ** | ||||||
| hg19:Y:17125409-G-T hg38:Y:15013529-G-T | ** | ||||||
| hg19:Y:17147443-TTTTC-T hg38:Y:15035563-TTTTC-T | ** | ||||||
| hg19:Y:17244514-G-T hg38:Y:15132634-G-T | ** | ||||||
| hg19:Y:17264940-T-G hg38:Y:15153060-T-G | ** | ||||||
| hg19:Y:17717097-C-A hg38:Y:15605217-C-A | FGC75647 | ** | |||||
| hg19:Y:17730508-C-A hg38:Y:15618628-C-A | ** | ||||||
| hg19:Y:17850108-A-C hg38:Y:15738228-A-C | ** | ||||||
| hg19:Y:17860069-A-G hg38:Y:15748189-A-G | ** | ||||||
| hg19:Y:18035934-C-A hg38:Y:15924054-C-A | ** | ||||||
| hg19:Y:18151941-T-C hg38:Y:16040061-T-C | ** | ||||||
| hg19:Y:18190236-C-T hg38:Y:16078356-C-T | ** | ||||||
| hg19:Y:18370815-T-C hg38:Y:16258935-T-C | P6_Prx | ** | |||||
| hg19:Y:18390072-A-C hg38:Y:16278192-A-C | P6_Gap | ** | |||||
| hg19:Y:18423903-G-T hg38:Y:16312023-G-T | P6_Gap | ** | |||||
| hg19:Y:18518291-TTG-T hg38:Y:16406411-TTG-T | P6_Dst | ** | |||||
| hg19:Y:18625426-G-T hg38:Y:16513546-G-T | ** | ||||||
| hg19:Y:18749665-T-C hg38:Y:16637785-T-C | ** | ||||||
| hg19:Y:18779398-C-A hg38:Y:16667518-C-A | ** | ||||||
| hg19:Y:19102787-C-A hg38:Y:16990907-C-A | ** | ||||||
| hg19:Y:19376196-G-C hg38:Y:17264316-G-C | ** | ||||||
| hg19:Y:19415581-C-G hg38:Y:17303701-C-G | ** | ||||||
| hg19:Y:19547283-C-A hg38:Y:17435403-C-A | ** | ||||||
| hg19:Y:19609371-A-C hg38:Y:17497491-A-C | P5_Prx | ** | |||||
| hg19:Y:20022465-T-C hg38:Y:17910585-T-C | P5_Prx | ** | |||||
| hg19:Y:20440080-T-CCCCCCCCCCCC hg38:Y:18278194-T-CCCCCCCCCCCC | P5_Dst | ** | |||||
| hg19:Y:20440079-CTTTTTGAGATA-C hg38:Y:18278193-CTTTTTGAGATA-C | P5_Dst | ** | |||||
| hg19:Y:20500840-A-AG hg38:Y:18338954-A-AG | P5_Dst | ** | |||||
| hg19:Y:20664841-ATG-A hg38:Y:18502955-ATG-A | P4_Prx | ** | |||||
| hg19:Y:21427675-C-A hg38:Y:19265789-C-A | ** | ||||||
| hg19:Y:21459738-C-A hg38:Y:19297852-C-A | ** | ||||||
| hg19:Y:21709200-T-G hg38:Y:19547314-T-G | ** | ||||||
| hg19:Y:21891059-C-A hg38:Y:19729173-C-A | ** | ||||||
| hg19:Y:21967770-T-G hg38:Y:19805884-T-G | ** | ||||||
| hg19:Y:22065255-G-A hg38:Y:19903369-G-A | ** | ||||||
| hg19:Y:22085393-C-A hg38:Y:19923507-C-A | ** | ||||||
| hg19:Y:22343622-G-T hg38:Y:20181736-G-T | DYZ19 | ** | |||||
| hg19:Y:22507124-C-G hg38:Y:20345238-C-G | DYZ19 | ** | |||||
| hg19:Y:22511101-G-A hg38:Y:20349215-G-A | DYZ19 | ** | |||||
| hg19:Y:22624808-C-A hg38:Y:20462922-C-A | ** | ||||||
| hg19:Y:22624860-C-T hg38:Y:20462974-C-T | FTB83915 | ** | |||||
| hg19:Y:22662047-T-G hg38:Y:20500161-T-G | ** | ||||||
| hg19:Y:22730519-C-A hg38:Y:20568633-C-A | ** | ||||||
| hg19:Y:22965138-G-T hg38:Y:20803252-G-T | ** | ||||||
| hg19:Y:22991171-C-A hg38:Y:20829285-C-A | ** | ||||||
| hg19:Y:23029877-A-C hg38:Y:20867991-A-C | ** | ||||||
| hg19:Y:23047639-C-A hg38:Y:20885753-C-A | ** | ||||||
| hg19:Y:23143985-C-A hg38:Y:20982099-C-A | ** | ||||||
| hg19:Y:23206733-A-C hg38:Y:21044847-A-C | ** | ||||||
| hg19:Y:23475453-T-A hg38:Y:21313567-T-A | ** | ||||||
| hg19:Y:23569145-C-A hg38:Y:21407259-C-A | ** | ||||||
| hg38:Y:21755589-G-A | ** | ||||||
| hg19:Y:24278266-G-A hg38:Y:22132119-G-A | P3_b1 | ** | |||||
| hg19:Y:24283306-A-T hg38:Y:22137159-A-T | P3_t1 | ** | |||||
| hg19:Y:24405025-A-C hg38:Y:22258878-A-C | ** | ||||||
| hg19:Y:24904739-G-T hg38:Y:22758592-G-T | g1 | ** | |||||
| hg19:Y:25993985-C-A hg38:Y:23847838-C-A | P1_Y1 | ** | |||||
| hg19:Y:26090415-G-T hg38:Y:23944268-G-T | P1_Y1 | ** | |||||
| hg19:Y:27527209-C-A hg38:Y:25381062-C-A | P1_Y2 | ** | |||||
| hg19:Y:27971755-ACAC-A hg38:Y:25825608-ACAC-A | P1_Y2 | ** | |||||
| hg19:Y:27971772-AAAG-A hg38:Y:25825625-AAAG-A | P1_Y2 | ** | |||||
| hg19:Y:27990618-G-T hg38:Y:25844471-G-T | P1_Y2 | ** | |||||
| hg19:Y:28610715-G-T hg38:Y:26464568-G-T | ** | ||||||
| hg19:Y:28633655-C-A hg38:Y:26487508-C-A | ** | ||||||
| hg19:Y:28654062-G-T hg38:Y:26507915-G-T | ** | ||||||
| hg19:Y:28674769-C-A hg38:Y:26528622-C-A | ** | ||||||
| hg19:Y:28757926-C-A hg38:Y:26611779-C-A | ** | ||||||
| hg19:Y:28764229-G-A hg38:Y:26618082-G-A | ** | ||||||
| hg19:Y:28806081-C-G hg38:Y:26659934-C-G | ** | ||||||
| hg19:Y:28808639-G-A hg38:Y:26662492-G-A | ** | ||||||
| hg19:Y:28812645-G-A hg38:Y:26666498-G-A | ** | ||||||
| hg19:Y:28818193-A-T hg38:Y:26672046-A-T | ** | ||||||
| hg38:Y:56830080-T-G | ** | ||||||
| hg38:Y:56835456-C-A | ** | ||||||
| hg38:Y:56838259-G-T | ** | ||||||
| hg38:Y:56850348-T-C | ** | ||||||
| hg38:Y:56872942-G-T | ** | ||||||
| hg19:Y:13480383-C-G hg38:Y:11324707-C-G | *** | ||||||
| hg19:Y:18659020-ATG-A hg38:Y:16547140-ATG-A | 8×TG | *** | |||||
| hg19:Y:58985560-G-A hg38:Y:56839413-G-A | *** | ||||||
| hg19:Y:28791350-A-T hg38:Y:26645203-A-T | *** | ||||||
| hg19:Y:7925833-GTT-G hg38:Y:8057792-GTT-G | 11×T | *** | |||||
| hg19:Y:22069742-C-A hg38:Y:19907856-C-A | *** | ||||||
| hg38:Y:56834492-C-A | *** | ||||||
| hg19:Y:23792029-CTTT-C hg38:Y:21630143-CTTT-C | 15×T | *** | |||||
| hg19:Y:22598745-CA-C,CAA hg38:Y:20436859-CA-C,CAA | 15×A | *** | |||||
| hg19:Y:13453371-T-A hg38:Y:11297695-T-A | *** | ||||||
| hg19:Y:17631029-C-A hg38:Y:15519149-C-A | *** | ||||||
| hg19:Y:20104254-GGGGAGA-G hg38:Y:17992374-GGGGAGA-G | P5_Dst | *** | |||||
| hg19:Y:9959859-ATAAT-A hg38:Y:10122250-ATAAT-A | *** | ||||||
| hg38:Y:10693233-C-T | *** | ||||||
| hg19:Y:15158611-GAAA-G hg38:Y:13046697-GAAA-G | 15×A | *** | |||||
| hg38:Y:10801671-C-CGGTTT | *** | ||||||
| hg19:Y:2738763-CTTTTT-C,CT hg38:Y:2870722-CTTTTT-C,CT | 17×T | *** | |||||
| hg19:Y:2752415-TAAAAA-T,TAAAAAA hg38:Y:2884374-TAAAAA-T,TAAAAAA | 23×A | *** | |||||
| hg19:Y:3640953-C-A hg38:Y:3772912-C-A | *** | ||||||
| hg19:Y:6475154-G-A hg38:Y:6607113-G-A | *** | ||||||
| hg19:Y:7028486-C-A hg38:Y:7160445-C-A | *** | ||||||
| hg38:Y:10671020-C-A | *** | ||||||
| hg38:Y:10686769-G-T | *** | ||||||
| hg38:Y:10792734-A-C,T | *** | ||||||
| hg38:Y:10878303-C-A | *** | ||||||
| hg38:Y:10958316-T-TAACG | *** | ||||||
| hg38:Y:10965527-T-A | *** | ||||||
| hg38:Y:10965543-C-G | *** | ||||||
| hg19:Y:13453245-A-T hg38:Y:11297569-A-T | *** | ||||||
| hg19:Y:14208941-C-A hg38:Y:12088235-C-A | *** | ||||||
| hg19:Y:14527019-C-A hg38:Y:12415220-C-A | *** | ||||||
| hg19:Y:14694640-C-A hg38:Y:12582706-C-A | *** | ||||||
| hg19:Y:15776065-G-T hg38:Y:13664185-G-T | *** | ||||||
| hg19:Y:16505918-T-TAAA hg38:Y:14394038-T-TAAA | 12×A | *** | |||||
| hg19:Y:19292325-C-CT hg38:Y:17180445-C-CT | 9×T | *** | |||||
| hg19:Y:19415730-C-T hg38:Y:17303850-C-T | *** | ||||||
| hg19:Y:19476542-G-A hg38:Y:17364662-G-A | *** | ||||||
| hg19:Y:22325293-G-C hg38:Y:20163407-G-C | DYZ19 | *** | |||||
| hg19:Y:23825018-G-A hg38:Y:21663132-G-A | *** | ||||||
| hg19:Y:24112750-G-A hg38:Y:21966603-G-A | P3_b1 | *** | |||||
| hg19:Y:28800674-G-T hg38:Y:26654527-G-T | *** | ||||||
| hg38:Y:56833238-C-G | *** | ||||||
| hg38:Y2:23120-T-G | *** | ||||||
| hg38:Y2:23209-T-G | *** | ||||||
| hg38:Y2:23218-C-T | FGC77792 | *** | |||||
| hg38:Y2:23225-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: N163675 | 9834096 | 8036270 | 7914889 |
| Used in age calculations | 9834096 | 8036270 | 7914889 |
| Counts of SNPs | 22 | 22 |
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