Tree Position

R-M269 > L23 > Z2103 > Z2106 > Z2108 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
B164801
26144602-C-A 23998455-C-A P1_Y1 A*
19580940-G-T 17469060-G-T P5_Prx YA*
22225175-C-A 20063289-C-A BY213084 DYZ19 A*
19795672-G-T 17683792-G-T P5_Prx A*
18355098-A-AT 16243218-A-AT P6_Prx 10×TA*
26186807-T-C 24040660-T-C P1_Y1 A*
19602052-A-G 17490172-A-G P5_Prx YA*
13687088-G-A 11531412-G-A A*
6284354-G-C 6416313-G-C IR3_Dst A*
28816739-A-G 26670592-A-G A*
23723164-C-T 21561278-C-T A*
28817369-T-A 26671222-T-A A*
6213348-C-G 6345307-C-G IR3_Dst A*
13470632-C-G 11314956-C-G A*
7202826-G-T 7334785-G-T Y22198 YY+
8743100-G-A 8875059-G-A Y14415 YY+
19521267-T-C 17409387-T-C Y21875 YY+
7245267-C-T 7377226-C-T Y20971 YY+
14399622-T-C 12278919-T-C A5921 YY+
7151391-G-A 7283350-G-A Y14414 YY+
21973254-G-A 19811368-G-A Y34196 YY+
22462083-T-A 20300197-T-A BY31682 DYZ19 +
22478069-A-T 20316183-A-T BY31684 DYZ19 +
22788198-A-G 20626312-A-G Y22213 YY+
22864115-G-C 20702229-G-C Y22214 YY+
22890443-T-C 20728557-T-C Y34523 YY+
22464836-G-T 20302950-G-T BY31683 DYZ19 +
8830113-C-T 8962072-C-T Y21872 YY+
19511626-G-A 17399746-G-A Y14420 YY+
16922421-A-AT 14810541-A-AT +
14008078-G-A 11887372-G-A Y14513 YY+
13870993-G-A 11750287-G-A Y14421 Y+
15013403-G-A 12901491-G-A Y34521 YY+
15525884-T-C 13414004-T-C Y34522 YY+
15922164-T-G 13810284-T-G Y20973 Y+
16057757-C-G 13945877-C-G Y95411 YY+
16487453-G-C 14375573-G-C Y20974 YY+
16593472-ATTG-A 14481592-ATTG-A +
16642474-A-G 14530594-A-G Y22203 YY+
17118288-C-G 15006408-C-G Y20975 YY+
14245771-C-T 12125065-C-T Y34524 YY+
17170526-G-A 15058646-G-A Y20976 YY+
17425601-A-T 15313721-A-T Y20977 YY+
17524586-T-C 15412706-T-C Y20978 YY+
18109530-G-C 15997650-G-C Y101330 YY+
18726734-T-A 16614854-T-A Y102522 YY+
18783610-C-T 16671730-C-T Y14416 YY+
18841246-C-T 16729366-C-T Y34195 YY+
9769425-T-G 9931816-T-G Y20972 Y+
9403647-A-G 9566038-A-G ZS2159 YY+
9101522-G-A 9263913-G-A Y21873 Y+
21903383-A-G 19741497-A-G M64M64 PAGES00044 YY+
19244269-T-C 17132389-T-C Y21874 YY+
23554453-A-G 21392567-A-G Y21876 YY+
8459392-A-ATTAT 8591351-A-ATTAT 6×TTAT+
15278298-A-T 13166387-A-T CTS3937CTS3937 M9805 V2873 YY+
20804004-TTGTGTGTGTGTG-T 18642118-TTGTGTGTGTGTG-T P4_Gap 19×TG*
21477220-CTTCTTATTCTTA-C 19315334-CTTCTTATTCTTA-C 8×TTCTTA*
13469991-C-T 11314315-C-T *
3715089-T-C 3847048-T-C Y23022 *
2802802-TTTC-T,TT 2934761-TTTC-T,TT *
22237760-C-A 20075874-C-A DYZ19 *
22257676-A-T 20095790-A-T DYZ19 *
22257677-G-T 20095791-G-T DYZ19 *
22302840-T-C 20140954-T-C DYZ19 *
5740883-G-T 5872842-G-T **
10870247-C-T **
10870536-A-T **
10843697-A-C **
10846984-A-G **
10877083-C-T **
10843157-G-T **
10814342-C-A **
10809314-A-T **
10872820-C-G **
10881871-A-G **
10880901-TCCTTTCCCTTCCATTCCATTCCATG-T **
10924858-A-T **
10939689-A-C **
10934683-C-T **
10934679-T-G **
10934663-C-T **
3990826-C-A 4122785-C-A BY25973 **
10934662-T-A **
10910149-G-T **
10881067-C-A **
10899808-G-T **
10899151-C-A **
4048845-G-T 4180804-G-T **
10887518-G-T **
10808042-G-A **
10881237-G-T **
4049639-T-C 4181598-T-C **
10801781-C-CA **
10805209-C-A **
4270695-T-C 4402654-T-C **
10746600-C-A **
10748016-C-CGTTG **
10748027-A-T **
10749646-G-T **
10752856-A-C **
10753021-T-G **
10753073-C-A **
4356943-C-A 4488902-C-A **
4270787-G-A 4402746-G-A FGC45816 **
10756583-A-G **
10756628-C-T **
10756637-T-C **
10756659-C-A **
10756663-C-G **
10805207-T-C **
10756668-C-A **
10756669-C-T FT429832 **
4222644-T-G 4354603-T-G **
10762351-C-T **
10769431-A-T **
10781425-C-A **
10790635-G-T **
10792247-C-A **
4198277-G-T 4330236-G-T **
10798563-T-C **
10798569-T-C **
10942488-A-C **
4087873-G-A 4219832-G-A **
4077440-C-A 4209399-C-A **
10940314-TC-T **
10978298-C-A **
10946588-G-T **
13855609-C-T 11734903-C-T FT20705 **
13545098-C-A 11389422-C-A **
13556788-T-C 11401112-T-C FT92648 **
13556820-C-A 11401144-C-A **
13557781-C-G 11402105-C-G **
11643212-T-G **
11659403-A-C **
11664639-TG-T **
11670613-G-T **
11671906-A-G **
11673724-T-C **
11674461-C-T FT393198 **
11674638-T-G **
13870745-C-A 11750039-C-A **
13493699-C-A 11338023-C-A **
3990658-C-A 4122617-C-A **
13885848-T-C 11765142-T-C BY49170 **
13893606-T-G 11772900-T-G **
13895760-C-A 11775054-C-A **
13895789-C-A 11775083-C-A **
13899020-C-T 11778314-C-T **
13940984-T-A 11820278-T-A **
13974761-C-T 11854055-C-T **
14002743-G-T 11882037-G-T Y14422 **
14006706-C-G 11886000-C-G Y14512 **
14007273-T-A 11886567-T-A **
14007326-G-C 11886620-G-C **
3941654-A-G 4073613-A-G **
13512291-G-T 11356615-G-T **
13434357-G-T 11278681-G-T **
10950847-A-C **
11022807-A-G **
10960403-A-C **
10976413-C-A **
10660117-T-C **
10983416-C-A **
10986876-C-T **
10996958-G-T **
10996983-T-C **
11000208-C-A **
11000209-T-C **
11001878-C-A **
11017462-T-C **
11022459-A-C **
11022785-A-G **
11022817-A-G **
13263353-C-A 11107677-C-A **
11022843-T-C **
11024577-C-A **
11030262-T-C **
11030267-A-T **
3990659-C-A 4122618-C-A **
11030283-C-A **
11030285-C-T **
11038169-C-A **
13206286-A-G 11050610-A-G **
13223042-A-G 11067366-A-G **
13224534-C-A 11068858-C-A **
13239677-A-G 11084001-A-G **
13263035-C-A 11107359-C-A **
10677233-C-A **
10039900-T-C 10202291-T-C **
10657084-G-A **
7063807-A-C 7195766-A-C **
5191264-G-T 5323223-G-T **
6663251-C-A 6795210-C-A **
6682155-A-C 6814114-A-C **
6693452-C-A 6825411-C-A **
6728996-C-CA 6860955-C-CA 9×A**
6772340-C-A 6904299-C-A **
6881333-C-A 7013292-C-A **
6882531-G-T 7014490-G-T **
6891947-T-A 7023906-T-A **
6925687-C-A 7057646-C-A **
6978277-G-T 7110236-G-T **
6992585-C-G 7124544-C-G **
7002904-G-T 7134863-G-T **
7093136-G-C 7225095-G-C Y14511 **
6519597-C-A 6651556-C-A **
7093695-A-G 7225654-A-G **
7101038-A-G 7232997-A-G **
7111509-C-A 7243468-C-A **
7111776-G-A 7243735-G-A **
7135144-A-T 7267103-A-T **
5191262-G-A 5323221-G-A **
7166631-TA-T 7298590-TA-T **
7166634-A-AAATTT 7298593-A-AAATTT **
7166640-A-AATTT 7298599-A-AATTT 12×T**
7170761-A-C 7302720-A-C **
7200711-C-A 7332670-C-A **
7217306-C-A 7349265-C-A **
7225467-C-A 7357426-C-A **
6582956-C-A 6714915-C-A **
6461557-G-C 6593516-G-C **
7236452-A-G 7368411-A-G **
6124205-C-A 6256164-C-A **
5802531-T-C 5934490-T-C **
5842043-C-G 5974002-C-G **
5873731-A-C 6005690-A-C **
5904731-A-C 6036690-A-C **
5904740-T-A 6036699-T-A **
5669818-C-A 5801777-C-A **
5926768-G-T 6058727-G-T **
5665333-TTTGAA-T 5797292-TTTGAA-T **
5933916-C-A 6065875-C-A **
5969902-G-A 6101861-G-A **
5645098-T-A 5777057-T-A **
6087742-T-C 6219701-T-C **
5620396-C-A 5752355-C-A **
5576763-C-A 5708722-C-A **
6441673-A-C 6573632-A-C **
5448631-G-T 5580590-G-T **
5313516-T-C 5445475-T-C **
6368726-T-C 6500685-T-C **
6369022-G-T 6500981-G-T **
5284239-C-G 5416198-C-G **
6439589-T-G 6571548-T-G **
5243529-A-T 5375488-A-T **
5216333-C-A 5348292-C-A **
5214954-G-T 5346913-G-T **
6439620-C-T 6571579-C-T **
6439623-A-G 6571582-A-G **
5214748-G-T 5346707-G-T **
6439660-G-A 6571619-G-A **
7232948-A-C 7364907-A-C **
5190075-T-G 5322034-T-G **
4370670-G-T 4502629-G-T **
9885123-G-T 10047514-G-T **
4688454-T-C 4820413-T-C **
9401333-AT-A 9563724-AT-A **
4688428-T-C 4820387-T-C **
9418889-C-A 9581280-C-A **
9511708-T-A 9674099-T-A **
9511788-G-A 9674179-G-A **
9535181-G-T 9697572-G-T IR3_Prx **
9535183-G-GT 9697574-G-GT IR3_Prx **
9535193-A-G 9697584-A-G IR3_Prx **
9535196-G-C 9697587-G-C IR3_Prx **
9702961-C-A 9865352-C-A IR3_Prx **
4439652-C-A 4571611-C-A **
9826004-G-T 9988395-G-T **
4423679-T-A 4555638-T-A FT74857 **
9094412-G-C 9256803-G-C **
9890261-T-G 10052652-T-G **
4423635-C-A 4555594-C-A **
9892499-T-C 10054890-T-C FT186052 **
9899498-T-C 10061889-T-C **
9931565-A-G 10093956-A-G **
9932812-C-A 10095203-C-A **
9941316-A-G 10103707-A-G FT361949 **
9967341-T-G 10129732-T-G **
9967345-C-A 10129736-C-A **
10004504-A-C 10166895-A-C **
5742839-C-A 5874798-C-A **
10646149-C-A **
10652466-T-A **
14019465-A-T 11898759-A-T **
8968277-C-T 9130668-C-T **
7257252-C-A 7389211-C-A **
8293213-T-G 8425172-T-G **
7296557-T-C 7428516-T-C **
7334097-A-G 7466056-A-G **
7341104-A-G 7473063-A-G **
7360756-A-G 7492715-A-G **
7580034-C-A 7711993-C-A FT179042 **
7590804-A-G 7722763-A-G **
7656791-C-A 7788750-C-A **
7752981-C-A 7884940-C-A **
7757266-T-C 7889225-T-C **
5011549-C-A 5143508-C-A **
8076102-C-A 8208061-C-A **
8100677-C-A 8232636-C-A **
8138013-T-C 8269972-T-C **
8293234-C-T 8425193-C-T **
8854375-C-A 8986334-C-A **
4951576-A-T 5083535-A-T **
8293240-A-C 8425199-A-C **
4858881-G-T 4990840-G-T **
8671644-G-T 8803603-G-T **
8720494-G-T 8852453-G-T **
8723831-C-A 8855790-C-A **
4766480-A-T 4898439-A-T **
4764633-G-C 4896592-G-C **
4751713-C-G 4883672-C-G **
8776631-C-A 8908590-C-A **
8790283-C-A 8922242-C-A **
8799694-C-A 8931653-C-A **
4702969-G-T 4834928-G-T **
14011463-C-A 11890757-C-A **
14446592-C-A 12325865-C-A **
14019528-A-C 11898822-A-C **
21238652-G-C 19076766-G-C **
20809810-A-G 18647924-A-G P4_Gap **
20815707-G-T 18653821-G-T P4_Gap **
20825379-C-A 18663493-C-A P4_Gap **
20839536-C-A 18677650-C-A P4_Gap **
20959438-ATT-A 18797552-ATT-A P4_Dst 11×T**
21012331-C-A 18850445-C-A P4_Dst **
21042329-C-A 18880443-C-A **
21127366-G-C 18965480-G-C **
21154049-C-A 18992163-C-A **
21224963-G-A 19063077-G-A **
21224985-T-C 19063099-T-C **
21224990-C-T 19063104-C-T **
21225029-C-T 19063143-C-T **
21238659-A-G 19076773-A-G **
20634071-T-TTGC 18472185-T-TTGC P4_Prx **
21243278-C-A 19081392-C-A **
21297537-A-T 19135651-A-T **
21306554-C-A 19144668-C-A **
21325836-C-A 19163950-C-A **
21457274-T-C 19295388-T-C **
21457447-A-G 19295561-A-G **
21482825-C-A 19320939-C-A **
21491037-A-G 19329151-A-G **
21540929-C-T 19379043-C-T **
21697977-C-A 19536091-C-A **
21742613-G-T 19580727-G-T **
21742704-C-A 19580818-C-A **
21742705-C-A 19580819-C-A **
21790556-T-C 19628670-T-C **
20723371-G-T 18561485-G-T P4_Prx **
20570261-T-A 18408375-T-A P5_Dst **
22015578-G-T 19853692-G-T **
19546231-A-G 17434351-A-G **
19014016-G-T 16902136-G-T **
19014159-C-T 16902279-C-T **
19123755-C-A 17011875-C-A **
19125064-G-A 17013184-G-A Y14423 **
19187428-T-TC 17075548-T-TC **
19226100-C-A 17114220-C-A BY31677 **
19272061-T-C 17160181-T-C **
19302597-T-G 17190717-T-G **
19340367-C-G 17228487-C-G **
19449213-G-A 17337333-G-A **
19464112-A-G 17352232-A-G **
19499128-T-G 17387248-T-G **
19506955-G-T 17395075-G-T **
19523575-C-T 17411695-C-T **
19555188-G-T 17443308-G-T **
20570235-T-A 18408349-T-A P5_Dst **
19558946-G-T 17447066-G-T **
19600396-GTGTGT-G 17488516-GTGTGT-G P5_Prx **
19622074-T-A 17510194-T-A P5_Prx **
19751617-A-ACC 17639737-A-ACC P5_Prx **
19751620-A-AC 17639740-A-AC P5_Prx **
19753422-T-G 17641542-T-G P5_Prx **
19753540-C-A 17641660-C-A P5_Prx **
20101619-G-T 17989739-G-T P5_Dst **
20125689-T-C 18013809-T-C P5_Dst **
20125701-G-C 18013821-G-C P5_Dst **
20212990-G-T 18051104-G-T P5_Dst **
20229595-T-A 18067709-T-A P5_Dst **
20229597-T-C 18067711-T-C P5_Dst **
20570201-T-G 18408315-T-G P5_Dst **
21953616-C-A 19791730-C-A **
22065255-G-T 19903369-G-T **
19013833-G-A 16901953-G-A **
27944196-A-AG 25798049-A-AG P1_Y2 **
23952961-G-T 21806814-G-T **
24119418-C-A 21973271-C-A P3_b1 **
24220819-C-G 22074672-C-G P3_b1 **
24407407-T-A 22261260-T-A **
24518353-T-C 22372206-T-C **
24573123-T-G 22426976-T-G P3_t2 **
24577879-A-AG 22431732-A-AG P3_t2 **
24910929-C-A 22764782-C-A g1 **
25971169-T-G 23825022-T-G P1_Y1 **
26730405-CA-C 24584258-CA-C P1_g2 **
27546538-C-A 25400391-C-A P1_Y2 **
27677575-G-T 25531428-G-T P1_Y2 **
27677594-C-T 25531447-C-T P1_Y2 **
27692992-A-T 25546845-A-T P1_Y2 **
28062432-G-C 25916285-G-C P1_Y2 **
21751075-C-A **
28459572-G-T 26313425-G-T **
28466682-G-T 26320535-G-T **
28511478-C-A 26365331-C-A **
28560854-T-G 26414707-T-G **
28582068-G-C 26435921-G-C **
28648383-C-A 26502236-C-A **
28650937-G-T 26504790-G-T **
28650972-T-G 26504825-T-G **
28694620-C-A 26548473-C-A **
28745105-G-T 26598958-G-T **
28800779-T-G 26654632-T-G **
56763533-A-G **
56837777-C-A **
56838158-C-A **
21754145-G-T **
23875365-A-G 21713479-A-G **
22130239-C-A 19968353-C-A **
23056299-T-G 20894413-T-G **
22173390-T-C 20011504-T-C **
22237656-C-A 20075770-C-A DYZ19 **
22317826-A-T 20155940-A-T DYZ19 **
22317827-G-T 20155941-G-T DYZ19 **
22658218-C-A 20496332-C-A **
22798285-AT-A 20636399-AT-A **
22816192-C-T 20654306-C-T **
22855035-T-G 20693149-T-G **
22881326-C-G 20719440-C-G **
22884989-G-T 20723103-G-T **
22901895-C-A 20740009-C-A **
22914649-C-A 20752763-C-A **
22970120-TA-T 20808234-TA-T **
22993399-T-A 20831513-T-A **
23127687-C-A 20965801-C-A **
23837747-G-T 21675861-G-T **
23127695-C-A 20965809-C-A **
23137456-A-C 20975570-A-C **
23137482-T-G 20975596-T-G **
23167891-C-A 21006005-C-A **
23285341-G-T 21123455-G-T **
23294277-C-A 21132391-C-A **
23368741-G-A 21206855-G-A Y34525 **
23397148-C-A 21235262-C-A **
23419062-C-A 21257176-C-A **
23465622-A-T 21303736-A-T **
23475460-C-T 21313574-C-T **
23565717-C-A 21403831-C-A **
23625426-G-A 21463540-G-A **
23779697-G-T 21617811-G-T **
19013975-G-T 16902095-G-T **
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3965311-C-A 4097270-C-A **
7866995-C-A 7998954-C-A **
3158798-C-A 3290757-C-A **
11022783-T-C **
28633731-C-A 26487584-C-A **
10669537-T-C **
13566059-C-A 11410383-C-A **
4374853-A-C 4506812-A-C **
28660576-C-A 26514429-C-A **
28545378-C-A 26399231-C-A **
5904773-C-A 6036732-C-A **
14021519-C-A 11900813-C-A **
10981131-C-A **
5858470-C-A 5990429-C-A **
16053574-C-A 13941694-C-A **
17511702-C-A 15399822-C-A **
10946629-C-T **
9013257-C-A 9175648-C-A 18×A**
11000585-C-A **
17821824-T-G 15709944-T-G **
10804779-C-A **
14933566-CTTTT-C 12821631-CTTTT-C 16×T**
10935424-C-T **
10935434-A-T **
10935459-T-C **
27952138-C-T 25805991-C-T P1_Y2 **
14007584-C-A 11886878-C-A **
11030110-T-A **
10776027-T-G **
6267697-A-AC 6399656-A-AC IR3_Dst **
25733058-A-T 23586911-A-T P1_b3 **
5449442-G-T 5581401-G-T FT419968 **
5968271-C-A 6100230-C-A **
10934685-T-A **
15410631-C-A 13298751-C-A **
27693000-G-T 25546853-G-T P1_Y2 **
27966828-G-T 25820681-G-T P1_Y2 **
10935474-ATCCCT-A **
26204652-A-T 24058505-A-T P1_Y1 **
4144084-C-A 4276043-C-A **
9700762-C-A 9863153-C-A IR3_Prx **
4873681-C-A 5005640-C-A **
10661968-C-A **
17946956-C-T 15835076-C-T **
10767770-C-A **
4999629-T-C 5131588-T-C **
26186640-T-G 24040493-T-G P1_Y1 **
18703163-C-A 16591283-C-A **
10826874-CA-C **
19622095-G-A 17510215-G-A P5_Prx **
19622090-G-A 17510210-G-A P5_Prx **
19622102-T-A 17510222-T-A P5_Prx **
19622083-T-A 17510203-T-A P5_Prx **
27966825-A-C 25820678-A-C P1_Y2 **
28496967-C-A 26350820-C-A **
11030222-C-T **
10876372-C-CTTCCA **
21207728-C-A 19045842-C-A **
14990171-C-A 12878256-C-A **
3990661-T-A 4122620-T-A Y81922 **
13236308-C-A 11080632-C-A **
7572789-C-A 7704748-C-A **
11030096-G-C **
9618173-G-T 9780564-G-T IR3_Prx **
11022465-G-C **
17118395-C-T 15006515-C-T 16×T**
14253241-C-A 12132535-C-A **
10839553-TTTCCA-T **
4969245-C-A 5101204-C-A **
2813700-C-A 2945659-C-A **
10770594-A-C **
11030278-C-T **
10770665-A-T **
18186144-C-A 16074264-C-A **
11003799-G-A **
19622094-T-A 17510214-T-A P5_Prx **
6265033-C-CAA 6396992-C-CAA IR3_Dst **
5969825-C-A 6101784-C-A **
15848742-C-A 13736862-C-A **
10668345-T-TACTCCACTCAACTCC **
8379119-C-A 8511078-C-A **
19622109-T-A 17510229-T-A P5_Prx **
16739507-C-A 14627627-C-A **
10825213-T-A **
9700775-C-A 9863166-C-A IR3_Prx **
4241879-C-A 4373838-C-A **
28510416-C-A 26364269-C-A **
2892561-G-T 3024520-G-T **
26047521-A-T 23901374-A-T P1_Y1 **
10912793-G-T **
10912811-G-T **
10912821-A-G **
10912827-C-T **
10756630-A-T **
10801692-C-A **
14174924-C-A 12054218-C-A **
10770607-C-A FT73089 **
6765634-TGG-T 6897593-TGG-T **
14527564-C-A 12415765-C-A **
7670716-C-A 7802675-C-A **
16035765-C-A 13923885-C-A **
56734829-G-T **
9057183-C-A ***
9645673-TG-T 9808064-TG-T IR3_Prx ***
10755408-G-A,T ***
14424114-G-T 12303389-G-T ***
3131151-CAGAT-C 3263110-CAGAT-C 12×AGAT***
2762692-C-T 2894651-C-T F8481 ***
2726116-C-CT 2858075-C-CT 11×T***
28776132-A-G 26629985-A-G ***
17419465-G-T 15307585-G-T ***
13578034-CAAA-C,CAA 11422358-CAAA-C,CAA 14×A***
8452191-AC-A 8584150-AC-A ***
21750981-G-T ***
15392826-T-C 13280946-T-C ***
23759113-T-A 21597227-T-A 24×A***
2831929-AAT-A 2963888-AAT-A ***
13698945-T-A 11543269-T-A ***
14407185-T-C 12286483-T-C A7241 ***
3987284-G-T 4119243-G-T ***
56827613-A-G ***
13714108-T-C 11558432-T-C ***
6807715-C-T 6939674-C-T Y82587 ***
7269640-G-T 7401599-G-T ***
28062586-G-T 25916439-G-T P1_Y2 ***
15930948-TCC-T 13819068-TCC-T ***
8452178-G-T 8584137-G-T ***
14845216-GA-G 12733282-GA-G 11×A***
56833321-C-T ***
17527438-GTATA-G 15415558-GTATA-G 18×TA***
13856446-T-C 11735740-T-C ***
23013636-TTTA-T 20851750-TTTA-T S3997 6×TTA***
18687704-CAA-C 16575824-CAA-C 14×A***
16909160-G-T 14797280-G-T ***
16236233-AAAAC-A 14124353-AAAAC-A 8×AAAC***
19469877-ACC-A 17357997-ACC-A 12×C***
5818143-C-T 5950102-C-T FT93802 11×AGAT***
5818139-T-C 5950098-T-C ***
2810393-A-T 2942352-A-T ***
10661203-ACTGCC-A,ACTGCA ***
9070124-C-CAAT 9232515-C-CAAT 10×AAT***
13273109-C-A 11117433-C-A ***
13463952-C-CACTG 11308276-C-CACTG ***
7053358-A-AAAAGAAAGAAAGAAAG 7185317-A-AAAAGAAAGAAAGAAAG 17×AAAG***
3271590-C-T 3403549-C-T ***
9038319-AT-A 9200710-AT-A 10×T***
17387296-A-G 15275416-A-G PF846 ***
18266813-C-A 16154933-C-A Z43517 ***
6878053-C-A 7010012-C-A ***
17005659-CG-C 14893779-CG-C 10×G***
22069020-G-A 19907134-G-A ***
56833308-TGCCAT-C,CTCCAT ***
14831720-G-T 12719787-G-T S16460 17×T***
13465573-AC-A 11309897-AC-A ***
16545644-A-T 14433764-A-T ***
19529488-GA-G,GAA 17417608-GA-G,GAA 10×A***
18923961-C-A 16812081-C-A ***
14774285-A-C 12662354-A-C ***
10971081-A-G ***
18185604-C-A 16073724-C-A FT408550 ***
10971080-C-T ***
10971072-C-T ***
21318470-T-C 19156584-T-C ***
2809540-ATT-A,AT 2941499-ATT-A,AT 18×T***
10747030-T-C ***
11655527-G-T BY27138 ***
10971126-A-T ***
8230611-TA-T 8362570-TA-T 8×A***
8525357-C-A 8657316-C-A ***
8479428-G-T 8611387-G-T ***
18951862-C-A 16839982-C-A ***
18997387-C-T 16885507-C-T FTB53050 ***
2795031-C-A 2926990-C-A ***
9996581-C-A 10158972-C-A ***
11003740-C-G ***
27216706-C-A 25070559-C-A P1_g3 ***
10934765-AG-A,AA ***
10797934-G-A,C ***
7984062-G-A 8116021-G-A ***
16760330-C-A 14648450-C-A ***
10653133-C-G ***
10653130-T-A ***
10653128-C-A ***
10744283-A-C ***
17420846-C-A 15308966-C-A ***
8124894-C-A 8256853-C-A ***
13601976-C-A 11446300-C-A ***
10669245-C-A ***
10691093-C-G,T ***
7762187-CAA-C 7894146-CAA-C 13×A***
15580149-CA-C 13468269-CA-C 10×A***
10958358-C-A ***
10965558-C-T ***
10965569-C-T ***
19204179-T-A 17092299-T-A ***
10895828-T-C ***
58848194-C-G 56742677-G-C ***
17669675-C-A 15557795-C-A ***
6672308-C-A 6804267-C-A ***
10929621-C-A ***
23803219-C-A 21641333-C-A ***
21238782-T-C 19076896-T-C ***
10797942-CTCTTT-C,CTCCTT ***
2836377-A-G 2968336-A-G ***
11001435-T-TCCATG ***
28755181-C-A 26609034-C-A ***
11003775-T-G ***
13642455-C-A 11486779-C-A ***
6792624-G-T 6924583-G-T ***
21989010-A-T 19827124-A-T ***
13472132-C-A 11316456-C-A ***
2752725-C-A 2884684-C-A 18×A***
27862620-A-G 25716473-A-G BY226932 P1_Y2 ***
23556204-TAA-T 21394318-TAA-T 12×A***
10754956-C-G ***
11003759-A-G ***
10677523-TTCCAG-T,TTCCAC ***
15480098-A-C 13368218-A-C ***
11015214-G-T ***
11001492-C-T ***
18615976-G-T 16504096-G-T FGC37075 ***
10801728-A-G ***
15557900-C-A 13446020-C-A ***
17141708-TC-T 15029828-TC-T ***
10808597-A-C ***
10801732-C-G ***
11015209-T-C ***
10988585-TA-T ***
20380002-G-T 18218116-G-T P5_Dst ***
9702932-G-A 9865323-G-A IR3_Prx ***
13642622-C-A 11486946-C-A ***
10887989-CTCCAC-C,CTCCAT ***
10764557-T-TTTGTG ***
11003712-C-G ***
21227398-G-T 19065512-G-T ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: B164801973717779329567818335
Used in age calculations973717779329567818335
Counts of SNPs3733
Variant counts last updated 2022-07-30 03:29:53.



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