Gerrits

BigY2: 307351
MDKA Birth: Germany

Tree Position

R-M269 > L23 > L51 > Z2118 > ~18571755-G-A > S1161 > S1141 > A613 > PR727 > Exact position not yet finalized.

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
307351
13687014-A-G 11531338-A-G A*
24294597-C-G 22148450-C-G P3_t1 A*
13694968-A-C 11539292-A-C A*
28816675-A-G 26670528-A-G A*
13694956-C-G 11539280-C-G A*
7405180-C-T 7537139-C-T FGC61488 YY+
18047937-T-C 15936057-T-C FGC61505 YY+
17611292-T-A 15499412-T-A FGC61503 YY+
4201337-G-A 4333296-G-A FGC61487 +
22109124-A-G 19947238-A-G Z13945 YY+
15900066-A-T 13788186-A-T FGC61498 YY+
21137882-C-T 18975996-C-T FGC61508 YY+
23334378-C-T 21172492-C-T FGC61511 YY+
16970700-C-G 14858820-C-G FGC61502 YY+
21492142-A-C 19330256-A-C FGC61509 YY+
18049751-C-A 15937871-C-A FGC61506 YY+
16328428-A-T 14216548-A-T FGC61499 YY+
21548359-C-A 19386473-C-A FGC61510 YY+
7948219-G-A 8080178-G-A FGC61489 YY+
18892657-CTT-C 16780777-CTT-C +
9112100-T-C 9274491-T-C FGC61493 Y+
2658668-C-T 2790627-C-T FGC61486 YY+
8900056-G-A 9032015-G-A FGC61492 Y+
22477321-G-T 20315435-G-T BY30036 DYZ19 +
8356120-A-G 8488079-A-G FGC61490 YY+
16872654-A-T 14760774-A-T FGC61501 YY+
15341069-AGTG-A 13229188-AGTG-A +
16525146-C-G 14413266-C-G FGC61500 YY+
8533232-A-C 8665191-A-C FGC61491 YY+
14843311-C-T 12731377-C-T FGC61495 YY+
14991407-A-T 12879492-A-T FGC61497 YY+
19294525-A-G 17182645-A-G FGC61507 YY+
14869757-A-G 12757827-A-G FGC61496 YY+
6396725-C-G 6528684-C-G FGC78911 +
13823335-C-A 11702629-C-A FGC61494 +
2851992-GA-G 2983951-GA-G 11×A*
3716778-G-T 3848737-G-T FTA43393 *
22432330-G-A 20270444-G-A DYZ19 *
18832757-T-TA 16720877-T-TA 12×A*
3718862-A-T 3850821-A-T FT318241 *
22299535-G-T 20137649-G-T DYZ19 *
22277421-C-G 20115535-C-G DYZ19 *
4472639-C-T 4604598-C-T *
13448196-ATTCCA-A,ATTCCATTCCATTCCG 11292520-ATTCCA-A,ATTCCATTCCATTCCG *
10870656-C-G **
10957952-C-A **
10956794-C-A **
10960936-A-C **
10870658-T-A **
10964812-C-T **
10870648-A-T **
10960955-C-T **
10870642-CT-C **
10961099-T-G **
10949578-C-T **
10869335-C-A **
10868462-G-T **
10867607-C-A **
10964822-G-GATTCC **
10964860-T-A **
10867548-G-A **
10866053-A-G **
10950298-G-T **
10879832-T-A **
10949561-T-G **
10944608-C-T **
10879837-A-ATTC **
10885090-T-C **
10879829-C-CT **
10879811-T-C **
10885097-C-G **
10885101-C-A **
10885102-C-CACACA **
10888570-C-A **
10933806-C-A **
10938427-C-G **
10938457-T-A **
10949455-C-T **
10879798-T-A **
10949470-C-T **
10964863-A-C **
10949472-CTACTG-C **
10949480-A-T **
10949487-C-A **
10879804-G-T **
10949497-C-T **
10949538-C-G **
10949539-T-G **
10879833-T-C **
10949557-C-T **
10949559-A-G **
10949550-C-T **
6930629-C-A 7062588-C-A **
10964869-T-C **
14136288-G-A 12015582-G-A FT367918 **
13855106-G-A 11734400-G-A **
13855220-T-C 11734514-T-C **
13880834-C-A 11760128-C-A FT279285 **
13896846-C-A 11776140-C-A **
13901809-T-C 11781103-T-C **
13919148-G-A 11798442-G-A **
13952675-A-C 11831969-A-C **
13958507-T-A 11837801-T-A **
14023566-T-C 11902860-T-C **
14029138-C-A 11908432-C-A **
14073968-C-A 11953262-C-A **
14108604-C-A 11987898-C-A **
14124962-T-C 12004256-T-C **
14184316-C-A 12063610-C-A **
11669515-G-A **
14230232-A-T 12109526-A-T **
14239796-G-T 12119090-G-T **
14263198-C-A 12142492-C-A **
14299960-A-C 12179254-A-C **
14339508-C-A 12218803-C-A **
14352162-A-T 12231457-A-T **
14352217-C-A 12231512-C-A **
14359838-C-A 12239133-C-A **
14363561-C-A 12242856-C-A **
14376649-C-A 12255945-C-A **
14379041-C-A 12258337-C-A **
14440469-G-T 12319742-G-T **
14473767-T-A 12353036-T-A **
13829234-GGAATGGAATGTCCTC-G 11708528-GGAATGGAATGTCCTC-G **
11651446-G-C **
10975895-A-C **
11022068-TCTC-A **
10984535-T-C **
10986128-C-A **
10989274-C-A **
10995527-C-A **
10999751-T-C **
11003195-A-T **
11013288-C-A FT393665 **
11020432-C-G FT393908 **
11020450-C-G **
11020456-T-C **
11020560-A-G **
11022041-C-G **
11022064-T-TCCC **
11022088-C-A **
11646199-A-T **
11022835-C-A **
11026040-C-T **
11026061-T-A **
11028216-A-T **
13205276-T-C 11049600-T-C **
13222029-A-G 11066353-A-G **
13486521-C-A 11330845-C-A **
13486781-C-A 11331105-C-A **
13588415-T-G 11432739-T-G **
13588547-C-A 11432871-C-A **
13613535-A-G 11457859-A-G **
13634366-G-T 11478690-G-T **
13704669-G-C 11548993-G-C **
10866027-C-CTCTGCTGTTT **
10829108-C-A **
10866021-C-T **
7336934-C-A 7468893-C-A **
7160608-A-T 7292567-A-T **
7160614-T-C 7292573-T-C **
7196450-C-A 7328409-C-A **
7197541-C-T 7329500-C-T **
7243748-G-A 7375707-G-A **
7252308-T-A 7384267-T-A **
7252345-T-G 7384304-T-G **
7252409-A-G 7384368-A-G **
7259015-G-T 7390974-G-T **
7301690-C-A 7433649-C-A FTB32645 **
7306793-C-A 7438752-C-A **
7315339-C-A 7447298-C-A **
7329273-C-A 7461232-C-A **
7359325-C-A 7491284-C-A **
7160572-A-G 7292531-A-G **
7391911-G-A 7523870-G-A **
7396354-A-T 7528313-A-T **
7422256-C-T 7554215-C-T **
7423915-A-G 7555874-A-G **
7433479-G-T 7565438-G-T **
7579601-C-A 7711560-C-A **
7641088-C-A 7773047-C-A **
7649065-C-A 7781024-C-A **
7650626-C-A 7782585-C-A **
7656946-G-A 7788905-G-A **
7670944-A-G 7802903-A-G **
7699376-T-C 7831335-T-C **
7757275-T-C 7889234-T-C **
7160584-A-C 7292543-A-C **
7160565-T-G 7292524-T-G **
8079510-C-A 8211469-C-A **
6766015-A-G 6897974-A-G Y19958 **
6291042-G-T 6423001-G-T IR3_Dst **
6293203-G-A 6425162-G-A IR3_Dst **
6361033-C-A 6492992-C-A **
6384255-T-C 6516214-T-C **
6414918-G-T 6546877-G-T **
6426869-G-C 6558828-G-C Y82148 **
6469008-A-T 6600967-A-T **
6505238-A-T 6637197-A-T **
6582799-T-A 6714758-T-A **
6593531-A-G 6725490-A-G **
6616583-G-T 6748542-G-T **
6642874-A-G 6774833-A-G **
6663105-C-A 6795064-C-A **
6766017-G-C 6897976-G-C **
7152617-A-C 7284576-A-C **
6791843-C-A 6923802-C-A **
6806784-C-A 6938743-C-A **
6833420-C-A 6965379-C-A **
6945960-C-A 7077919-C-A **
6953370-C-A 7085329-C-A **
7031151-A-G 7163110-A-G **
7063190-T-A 7195149-T-A **
7075887-C-A 7207846-C-A **
7081105-A-T 7213064-A-T **
7103388-C-A 7235347-C-A **
7123765-C-A 7255724-C-A **
7137074-AT-A 7269033-AT-A **
7140346-G-C 7272305-G-C **
7149461-G-T 7281420-G-T **
8074838-T-G 8206797-T-G **
8124936-G-AA 8256895-G-AA **
10866014-T-A **
10818627-AT-A **
10746653-C-T **
10752119-G-C FGC78841 **
10752728-A-T **
10752755-T-A **
10754534-C-T **
10755062-C-A **
10755066-G-C **
10757430-C-T **
10776281-C-A **
10785240-T-G **
10790956-C-A **
10803944-T-A **
10804276-A-G **
10818631-CATGT-C **
10690605-C-A **
10826887-T-C **
14486070-CAA-C 12365339-CAA-C **
10831059-T-C **
10831077-C-CA **
10831081-CT-C **
10831088-A-ACTCAATTCC **
10831136-T-C **
10831154-T-C **
10838832-T-A **
10845442-G-T **
10845448-T-G **
10863647-G-T **
10866006-C-T **
10690669-T-A **
10683320-T-C **
8135611-C-A 8267570-C-A **
9937621-T-C 10100012-T-C **
8154143-T-G 8286102-T-G **
8172765-G-C 8304724-G-C **
8181221-A-T 8313180-A-T **
8407377-C-A 8539336-C-A **
8568487-TGCA-T 8700446-TGCA-T **
8705841-C-A 8837800-C-A **
8776638-C-A 8908597-C-A **
8817061-T-A 8949020-T-A **
8840551-C-T 8972510-C-T **
9619899-A-G 9782290-A-G IR3_Prx **
9907430-C-T 10069821-C-T **
9915520-A-G 10077911-A-G **
9927280-C-A 10089671-C-A **
9952405-T-G 10114796-T-G **
10679256-C-A **
9952442-T-G 10114833-T-G **
9956456-C-A 10118847-C-A **
9991234-C-A 10153625-C-A **
10004343-C-A 10166734-C-A **
10024305-T-A 10186696-T-A **
10034237-C-A 10196628-C-A **
10037902-C-A 10200293-C-A **
10617723-T-G **
10625769-C-A **
10646002-C-A **
10660125-C-T **
10662833-T-G **
10669143-T-G **
10673332-C-T **
14479648-G-A 12358917-G-A **
14910889-C-A 12798956-C-A **
14519586-C-A 12407787-C-A **
22125750-C-T 19963864-C-T **
21435115-G-GAA 19273229-G-GAA 14×A**
21459930-C-T 19298044-C-T **
21531437-C-A 19369551-C-A **
21560463-A-C 19398577-A-C **
21602716-C-A 19440830-C-A **
21614799-C-A 19452913-C-A **
21856723-G-A 19694837-G-A **
21922045-C-G 19760159-C-G **
21957907-G-T 19796021-G-T **
22044038-G-T 19882152-G-T **
22085563-C-T 19923677-C-T **
22125727-C-A 19963841-C-A **
22155571-C-A 19993685-C-A **
21357557-T-C 19195671-T-C **
22215842-T-C 20053956-T-C **
22356807-C-G 20194921-C-G DYZ19 **
22425527-A-C 20263641-A-C DYZ19 **
22485802-T-G 20323916-T-G DYZ19 **
22485809-T-G 20323923-T-G DYZ19 **
22485810-GT-G 20323924-GT-G DYZ19 **
22521113-C-A 20359227-C-A **
22580231-G-A 20418345-G-A **
22602293-T-C 20440407-T-C **
22787309-A-T 20625423-A-T **
22829543-G-T 20667657-G-T **
22876438-C-A 20714552-C-A **
22949886-T-C 20788000-T-C **
21389836-C-A 19227950-C-A **
21353282-C-A 19191396-C-A **
23004799-A-G 20842913-A-G **
20352177-G-T 18190291-G-T P5_Dst **
19310934-G-C 17199054-G-C **
19310938-A-G 17199058-A-G **
19310944-T-A 17199064-T-A **
19310949-G-C 17199069-G-C **
19429522-C-A 17317642-C-A **
19465590-G-T 17353710-G-T **
19489321-G-C 17377441-G-C **
19517960-C-T 17406080-C-T **
19530458-C-A 17418578-C-A **
19535736-T-A 17423856-T-A **
19770820-C-A 17658940-C-A P5_Prx **
20131042-T-TG 18019162-T-TG P5_Dst **
20131099-T-C 18019219-T-C P5_Dst **
20641606-A-AGT 18479720-A-AGT P4_Prx **
21281785-G-T 19119899-G-T **
20650575-T-C 18488689-T-C P4_Prx **
20659307-C-A 18497421-C-A P4_Prx **
20840920-C-A 18679034-C-A P4_Gap **
21031281-C-A 18869395-C-A P4_Dst **
21069963-AT-A 18908077-AT-A **
21072189-C-T 18910303-C-T **
21084477-C-A 18922591-C-A **
21092244-T-C 18930358-T-C **
21112055-CTTTAAAAG-C 18950169-CTTTAAAAG-C **
21133383-C-A 18971497-C-A **
21146274-C-T 18984388-C-T **
21153252-C-A 18991366-C-A **
21196565-G-T 19034679-G-T **
22949964-A-T 20788078-A-T **
23004888-C-A 20843002-C-A **
19280752-C-A 17168872-C-A **
28635607-G-A 26489460-G-A **
26153955-T-C 24007808-T-C P1_Y1 **
26418780-A-T 24272633-A-T P1_Y1 **
27054116-T-C 24907969-T-C P1_r4 **
28030608-G-T 25884461-G-T P1_Y2 **
28081883-AACAC-A 25935736-AACAC-A P1_Y2 8×AC**
28500846-C-A 26354699-C-A **
28500893-C-A 26354746-C-A **
28500896-C-G 26354749-C-G **
28545928-A-T 26399781-A-T **
28555682-C-A 26409535-C-A BY152477FT6572 **
28580415-TTCTC-T 26434268-TTCTC-T **
28596795-C-A 26450648-C-A **
28596830-AGTAGCTG-A 26450683-AGTAGCTG-A **
28640377-T-G 26494230-T-G **
24870062-A-T 22723915-A-T IR1_R **
28657517-A-T 26511370-A-T **
28660887-C-A 26514740-C-A **
28724770-A-C 26578623-A-C **
28728393-C-A 26582246-C-A **
28782253-A-G 26636106-A-G **
28784688-T-G 26638541-T-G **
28800878-G-C 26654731-G-C **
56827479-T-C **
56841904-T-A **
56861757-T-A **
30815-T-A **
35447-T-A **
35452-C-T **
24877221-G-T 22731074-G-T g1 **
24614203-C-A 22468056-C-A P3_t2 **
23006751-G-C 20844865-G-C **
23438820-G-C 21276934-G-C **
23006754-G-A 20844868-G-A **
23006771-A-G 20844885-A-G **
23008993-T-C 20847107-T-C **
23013794-C-G 20851908-C-G **
23044137-C-A 20882251-C-A **
23047620-C-A 20885734-C-A **
23056166-T-A 20894280-T-A **
23204373-G-T 21042487-G-T **
23252730-T-C 21090844-T-C **
23255311-C-A 21093425-C-A **
23364364-C-A 21202478-C-A **
23398281-T-A 21236395-T-A **
23434494-T-C 21272608-T-C **
23466353-C-A 21304467-C-A **
24607775-A-AG 22461628-A-AG P3_t2 **
23625524-A-G 21463638-A-G **
23801570-C-A 21639684-C-A **
23808793-A-C 21646907-A-C **
23831304-A-T 21669418-A-T **
23954070-G-T 21807923-G-T **
24109197-A-G 21963050-A-G P3_b1 **
24242257-C-A 22096110-C-A P3_b1 **
24342478-T-G 22196331-T-G P3_t1 **
24417079-A-G 22270932-A-G ZS2472 **
24421921-G-T 22275774-G-T **
24475106-C-A 22328959-C-A **
24523501-G-T 22377354-G-T **
24600687-T-AAAA 22454540-T-AAAA P3_t2 **
19310925-G-T 17199045-G-T **
19271573-T-G 17159693-T-G **
14529254-A-C 12417455-A-C FT413430 **
16058835-GA-G 13946955-GA-G **
15770070-A-T 13658190-A-T **
15778604-G-A 13666724-G-A **
15781846-C-A 13669966-C-A **
15789175-A-C 13677295-A-C **
15793538-C-A 13681658-C-A **
15841885-T-C 13730005-T-C **
15843159-G-A 13731279-G-A FTA28260 **
15866869-C-T 13754989-C-T FGC47769 **
15894579-C-A 13782699-C-A **
15940281-T-A 13828401-T-A **
15967496-T-A 13855616-T-A **
16004195-G-T 13892315-G-T **
16016448-G-A 13904568-G-A **
16063253-T-A 13951373-T-A **
15728766-C-A 13616886-C-A **
16119966-T-TCTTC 14008086-T-TCTTC P8_Prx **
16192775-C-G 14080895-C-G FT89392 **
16266048-C-A 14154168-C-A **
16298540-A-C 14186660-A-C **
16309570-TCAA-T 14197690-TCAA-T **
16319866-G-T 14207986-G-T **
16344705-T-C 14232825-T-C **
16405538-C-A 14293658-C-A **
16412239-A-T 14300359-A-T **
16421103-G-T 14309223-G-T **
16539515-A-G 14427635-A-G **
16617289-C-A 14505409-C-A FTB73701 **
16681431-C-A 14569551-C-A **
15731428-T-C 13619548-T-C **
15635901-A-G 13524021-A-G **
16702921-C-T 14591041-C-T **
14933559-AC-A 12821624-AC-A **
14529257-T-C 12417458-T-C **
14546845-C-A 12435046-C-A **
14561265-G-A 12449466-G-A **
14564014-G-C 12452214-G-C **
14609798-TC-T 12498000-TC-T **
14610592-A-C 12498794-A-C **
14661574-C-A 12549639-C-A **
14720332-T-C 12608400-T-C **
14785693-T-G 12673763-T-G **
14786474-G-A 12674544-G-A **
14826528-C-A 12714595-C-A **
14831897-T-A 12719964-T-A **
6291018-T-TC 6422977-T-TC IR3_Dst **
14948912-A-T 12836986-A-T **
15608179-C-A 13496299-C-A **
15193369-G-T 13081455-G-T **
15208841-G-T 13096927-G-T **
15219141-C-A 13107227-C-A **
15227012-C-A 13115098-C-A **
15264738-G-C 13152827-G-C **
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10934858-C-G ***
10949974-A-C ***
4862533-C-A 4994492-C-A ***
23006816-A-G 20844930-A-G ***
6434921-TAAA-T 6566880-TAAA-T 20×A***
14590575-C-A 12478775-C-A 4×AAAT***
16478359-CAAAA-C 14366479-CAAAA-C 18×A***
22055578-C-A 19893692-C-A ***
8462063-GC-G 8594022-GC-G ***
22529461-C-A 20367575-C-A ***
14610513-T-C 12498715-T-C ***
58982793-C-T 56836646-C-T ***
19418523-T-A 17306643-T-A ***
22917687-C-CT,CTT 20755801-C-CT,CTT 12×T***
10859368-G-T ***
15928399-C-A 13816519-C-A ***
21044090-TAA-T 18882204-TAA-T 14×A***
15491777-G-GGT 13379897-G-GGT 15×GT***
7636001-G-A 7767960-G-A ***
2649801-TC-T 2781760-TC-T ***
10652914-G-T ***
6948104-T-G 7080063-T-G ***
2802800-A-T 2934759-A-T ***
16146478-GA-G 14034598-GA-G P8_Dst ***
16424316-G-T 14312436-G-T ***
20063939-T-A 17952059-T-A P5_Gap ***
22185855-C-CT 20023969-C-CT 25×T***
10687602-T-A ***
18843873-A-AT 16731993-A-AT 11×T***
28657132-C-A 26510985-C-A BY58804BY150849 ***
8599989-A-T 8731948-A-T FTA36063 ***
13938882-CAA-C 11818176-CAA-C 13×A***
13642303-C-A 11486627-C-A ***
21318477-C-A 19156591-C-A 19×A***
14394499-G-A 12273795-G-A ***
17081200-TCA-T 14969320-TCA-T 9×CA***
13821177-AGGAATGGAAT-A 11700471-AGGAATGGAAT-A 10×GGAAT***
16889914-T-TATAAATAA 14778034-T-TATAAATAA 11×ATAA***
7401140-ATT-A,AT 7533099-ATT-A,AT 14×T***
13811072-T-TA 11690366-T-TA ***
6989106-T-A 7121065-T-A ***
11676603-A-T ***
6120304-TACATGTATATAAGTATATATGC-T 6252263-TACATGTATATAAGTATATATGC-T ***
27791980-GCTT-G 25645833-GCTT-G P1_Y2 9×CTT***
13489328-G-A 11333652-G-A BY26221 ***
17791245-C-CA 15679365-C-CA 13×A***
14994372-C-A 12882457-C-A ***
13487492-C-A 11331816-C-A ***
13489671-T-A 11333995-T-A ***
13454553-A-G 11298877-A-G ***
13476047-C-A 11320371-C-A ***
24278183-C-CAAGAAAGAAGGA 22132036-C-CAAGAAAGAAGGA P3_b1 22×AAGA***
24511358-C-G 22365211-C-G ***
58975928-C-G 56829781-C-G ***
11643749-G-T ***
18806082-A-T 16694202-A-T ***
10687586-A-G ***
28234440-G-A 26088293-G-A P1_b4 ***
17028811-C-A 14916931-C-A ***
13594198-C-A 11438522-C-A ***
8452220-C-A 8584179-C-A ***
2948624-GTA-G 3080583-GTA-G ***
56835530-A-C,G ***
23827569-T-G 21665683-T-G ***
14071380-G-T 11950674-G-T ***
13463964-G-T 11308288-G-T ***
13463938-G-A 11308262-G-A ***
10841161-G-C ***
22319026-AGAAT-A 20157140-AGAAT-A DYZ19 ***
13488671-A-T 11332995-A-T ***
23196197-G-T 21034311-G-T ***
16729986-C-T 14618106-C-T ***
4244800-AT-A 4376759-AT-A 10×T***
16342089-CTACCA-C 14230209-CTACCA-C ***
9847332-C-T 10009723-C-T ***
13483310-A-T 11327634-A-T A15658 ***
18072917-C-A 15961037-C-A ***
18996884-CTTT-C 16885004-CTTT-C 13×T***
8854094-C-A 8986053-C-A ***
7518493-CAAA-C 7650452-CAAA-C 19×A***
15982155-C-A 13870275-C-A M12382 ***
18060887-T-C 15949007-T-C ***
15423453-C-T 13311573-C-T FTB52223 ***
2762681-C-T 2894640-C-T M12001 ***
15422085-G-A 13310205-G-A FTB43654 ***
15176279-CAAA-C 13064365-CAAA-C 16×A***
10763338-TCCAC-T,TTCCAC ***
11014333-A-G ***
13448706-C-G 11293030-C-G ***
56829003-T-TCCTTC ***
19254665-C-A 17142785-C-A ***
9798100-G-T 9960491-G-T ***
10687596-A-T ***
17537851-C-A 15425971-C-A ***
18723214-A-G 16611334-A-G ***
10992978-C-G ***
10677289-ACAATCTCAG-A ***
22919325-GTTT-G 20757439-GTTT-G 20×T***
10664800-C-T ***
18828030-C-T 16716150-C-T ***
21754302-G-T ***
10687599-C-T ***
2762685-C-T 2894644-C-T ***
9013257-C-CA 9175648-C-CA 18×A***
10992964-C-T ***
11666608-C-A ***
13448238-C-CAAT 11292562-C-CAAT ***
10664793-T-C ***
10946110-A-G ***
10916112-G-T ***
19720740-A-G 17608860-A-G P5_Prx ***
20807038-T-C 18645152-T-C P4_Gap ***
10785285-T-C ***
58979255-C-A 56833108-C-A ***
22804535-C-CA 20642649-C-CA 12×A***
2752415-TAAAA-T 2884374-TAAAA-T 23×A***
28773611-C-A 26627464-C-A ***
21935027-C-A 19773141-C-A ***
11020194-A-C ***
3550569-CAACT-C,CACT 3682528-CAACT-C,CACT ***
22055554-A-G 19893668-A-G ***
10899925-GCATTC-G ***
22114929-TA-T 19953043-TA-T 8×A***
58979458-C-T 56833311-C-T ***
19345128-TAA-T 17233248-TAA-T 18×A***
13643329-C-A 11487653-C-A ***
18589697-ATTTT-A 16477817-ATTTT-A 18×T***
22229305-T-A 20067419-T-A DYZ19 ***
22256841-C-A 20094955-C-A BY46600 DYZ19 ***
9798063-GTTT-G 9960454-GTTT-G 17×T***
22319020-CAAGT-C,CAAGA 20157134-CAAGT-C,CAAGA DYZ19 ***
15750502-CTTT-C 13638622-CTTT-C 18×T***
8119045-C-T 8251004-C-T ***
17082977-CCTTTCTTTCTTT-C,CCTTT 14971097-CCTTTCTTTCTTT-C,CCTTT 15×CTTT***
10868553-T-A ***
15289049-C-A 13177148-C-A ***
15208835-G-A 13096921-G-A ***
11020179-G-T ***
11020184-T-C ***
17952600-C-A 15840720-C-A ***
8073571-C-A 8205530-C-A ***
15221651-C-A 13109737-C-A ***
2750762-A-G 2882721-A-G ***
17951291-C-A 15839411-C-A ***
17950876-AT-A 15838996-AT-A ***
56836642-C-G ***
9847317-TG-T 10009708-TG-T ***
21300066-A-T 19138180-A-T ***
11643794-G-A ***
13489306-G-A 11333630-G-A BY26217 ***
10763360-C-CGTTAT,T ***
15156511-A-T 13044598-A-T ***
3164067-C-A 3296026-C-A ***
21464771-GTTCTTCTTC-G,GTTC 19302885-GTTCTTCTTC-G,GTTC 16×TTC***
10657357-C-T ***
7461747-C-T 7593706-C-T IR1_L ***
6933361-T-C 7065320-T-C PR805 KMS35 ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 307351939088376623687580087
Used in age calculations939088376623687580087
Counts of SNPs2224
Variant counts last updated 2022-07-30 03:29:53.


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