Greer
BigY2: 345404MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 345404 |
---|---|---|---|---|---|---|---|
hg19:Y:16120953-G-A hg38:Y:14009073-G-A | P8_Prx | A* | |||||
hg19:Y:19855494-C-T hg38:Y:17743614-C-T | P5_Prx | A* | |||||
hg19:Y:22282636-C-CT hg38:Y:20120750-C-CT | DYZ19 | A* | |||||
hg19:Y:24244042-G-A hg38:Y:22097895-G-A | P3_b1 | A* | |||||
hg19:Y:24249626-A-G hg38:Y:22103479-A-G | P3_b1 | A* | |||||
hg19:Y:7689689-G-A hg38:Y:7821648-G-A | Z16056 | Y | Y | + | |||
hg19:Y:2855134-T-C hg38:Y:2987093-T-C | BY56857 | Y | Y | + | |||
hg19:Y:2878334-C-A hg38:Y:3010293-C-A | BY57017 | Y | Y | + | |||
hg19:Y:8259656-T-C hg38:Y:8391615-T-C | BY71230 | Y | Y | + | |||
hg19:Y:8655084-C-T hg38:Y:8787043-C-T | BY74973 | Y | Y | + | |||
hg19:Y:18100673-A-C hg38:Y:15988793-A-C | BY120025 | Y | Y | + | |||
hg19:Y:18984882-G-T hg38:Y:16873002-G-T | BY11666 | Y | Y | + | |||
hg19:Y:20752042-G-A hg38:Y:18590156-G-A | BY212338 | P4_Prx | + | ||||
hg19:Y:21659828-A-C hg38:Y:19497942-A-C | BY134557 | Y | Y | + | |||
hg19:Y:21970661-T-C hg38:Y:19808775-T-C | BY136725 | Y | Y | + | |||
hg19:Y:13833862-GAATGGAATGC-G hg38:Y:11713156-GAATGGAATGC-G | DYZ17 | * | |||||
hg19:Y:22225639-T-C hg38:Y:20063753-T-C | DYZ19 | * | |||||
hg19:Y:2790303-CTTTT-C hg38:Y:2922262-CTTTT-C | 15×T | ** | |||||
hg19:Y:22435596-C-A hg38:Y:20273710-C-A | DYZ19 | ** | |||||
hg19:Y:7277546-A-G hg38:Y:7409505-A-G | CTS1220 Z2706 | ** | |||||
hg19:Y:13952265-T-C hg38:Y:11831559-T-C | FT346077 | ** | |||||
hg19:Y:13952304-A-G hg38:Y:11831598-A-G | FTB17321 | ** | |||||
hg19:Y:5170248-G-A hg38:Y:5302207-G-A | FT341795 | 11×AGGA | ** | ||||
hg19:Y:13245008-A-T hg38:Y:11089332-A-T | FT56688 | ** | |||||
hg19:Y:13633038-C-A hg38:Y:11477362-C-A | Z16498 | ** | |||||
hg19:Y:14845447-ATAT-A hg38:Y:12733513-ATAT-A | 6×TAT | ** | |||||
hg19:Y:22962057-G-A hg38:Y:20800171-G-A | ** | ||||||
hg19:Y:24415780-A-G hg38:Y:22269633-A-G | PF1922 | ** | |||||
hg19:Y:13139607-A-T hg38:Y:10629093-A-T | ** | ||||||
hg19:Y:16345135-C-CTCT hg38:Y:14233255-C-CTCT | 18×TCT | ** | |||||
hg19:Y:28764328-C-A hg38:Y:26618181-C-A | ** | ||||||
hg19:Y:13468110-C-A hg38:Y:11312434-C-A | ** | ||||||
hg19:Y:17199983-A-G hg38:Y:15088103-A-G | ** | ||||||
hg19:Y:13485617-C-A hg38:Y:11329941-C-A | ** | ||||||
hg19:Y:13485636-C-A hg38:Y:11329960-C-A | ** | ||||||
hg19:Y:15302772-C-A hg38:Y:13190871-C-A | ** | ||||||
hg38:Y:10799560-C-CACTCT | ** | ||||||
hg38:Y:10971972-C-T | ** | ||||||
hg38:Y:10982244-C-CATTTT | ** | ||||||
hg19:Y:14934351-T-G hg38:Y:12822416-T-G | ** | ||||||
hg19:Y:19531313-C-A hg38:Y:17419433-C-A | ** | ||||||
hg19:Y:19600452-G-T hg38:Y:17488572-G-T | P5_Prx | ** | |||||
hg38:Y:10654046-C-A | ** | ||||||
hg19:Y:15410856-C-A hg38:Y:13298976-C-A | ** | ||||||
hg19:Y:22028786-C-A hg38:Y:19866900-C-A | ** | ||||||
hg38:Y:10809632-TCCAC-T | ** | ||||||
hg38:Y:10963308-T-A | ** | ||||||
hg38:Y:56825619-G-T | ** | ||||||
hg19:Y:4534123-C-A hg38:Y:4666082-C-A | ** | ||||||
hg38:Y:10846850-C-T | ** | ||||||
hg38:Y:10893865-T-C | ** | ||||||
hg38:Y:10942674-C-T | ** | ||||||
hg38:Y:10972607-A-T | ** | ||||||
hg38:Y:10825300-C-G | ** | ||||||
hg38:Y:10955308-T-C | ** | ||||||
hg38:Y:10672015-C-A | ** | ||||||
hg19:Y:9944737-C-A hg38:Y:10107128-C-A | ** | ||||||
hg38:Y:11026108-C-A | ** | ||||||
hg38:Y:11026110-T-C | ** | ||||||
hg38:Y:10942649-CTACAT-C | ** | ||||||
hg38:Y:11003221-C-T | ** | ||||||
hg38:Y:10750791-T-TG | ** | ||||||
hg38:Y:10750792-T-TCACA | ** | ||||||
hg38:Y:10750799-C-A | ** | ||||||
hg38:Y:11005500-T-C | ** | ||||||
hg38:Y:11003962-T-C | ** | ||||||
hg19:Y:28792405-G-T hg38:Y:26646258-G-T | ** | ||||||
hg38:Y:10793976-C-A | ** | ||||||
hg38:Y:10947848-T-C | ** | ||||||
hg19:Y:20669275-GT-G hg38:Y:18507389-GT-G | P4_Prx | ** | |||||
hg38:Y:10972668-G-C | ** | ||||||
hg19:Y:14228707-C-A hg38:Y:12108001-C-A | FT67681 | ** | |||||
hg19:Y:19248225-C-A hg38:Y:17136345-C-A | ** | ||||||
hg38:Y:10793891-A-C | ** | ||||||
hg38:Y:10926708-C-A | ** | ||||||
hg38:Y:10846894-T-A | ** | ||||||
hg19:Y:9799132-G-T hg38:Y:9961523-G-T | ** | ||||||
hg38:Y:11005462-C-A | ** | ||||||
hg19:Y:15556724-C-A hg38:Y:13444844-C-A | ** | ||||||
hg38:Y:10912606-G-A | ** | ||||||
hg38:Y:10912632-A-T | ** | ||||||
hg38:Y:10912644-T-G | ** | ||||||
hg19:Y:21163145-C-A hg38:Y:19001259-C-A | ** | ||||||
hg19:Y:9965510-G-T hg38:Y:10127901-G-T | ** | ||||||
hg19:Y:6310916-T-A hg38:Y:6442875-T-A | IR3_Dst | ** | |||||
hg19:Y:13485715-A-G hg38:Y:11330039-A-G | ** | ||||||
hg19:Y:15742087-G-T hg38:Y:13630207-G-T | ** | ||||||
hg19:Y:22353453-G-T hg38:Y:20191567-G-T | DYZ19 | ** | |||||
hg38:Y:10942669-T-C | ** | ||||||
hg19:Y:15916289-C-A hg38:Y:13804409-C-A | FT222133 | ** | |||||
hg38:Y:11006079-C-T | ** | ||||||
hg19:Y:15927850-C-A hg38:Y:13815970-C-A | ** | ||||||
hg38:Y:10801242-C-A | ** | ||||||
hg19:Y:14413113-C-A hg38:Y:12292410-C-A | ** | ||||||
hg38:Y:10982230-A-G | ** | ||||||
hg38:Y:10982236-T-TTCTAA | ** | ||||||
hg19:Y:18756163-C-A hg38:Y:16644283-C-A | ** | ||||||
hg19:Y:27939540-C-A hg38:Y:25793393-C-A | P1_Y2 | ** | |||||
hg38:Y:10942647-C-A | ** | ||||||
hg19:Y:23875653-C-A hg38:Y:21713767-C-A | ** | ||||||
hg38:Y:10785803-C-A | ** | ||||||
hg38:Y:10785809-C-A | ** | ||||||
hg19:Y:17199546-A-AT hg38:Y:15087666-A-AT | 9×T | ** | |||||
hg38:Y2:31153-T-G | ** | ||||||
hg19:Y:16757214-C-A hg38:Y:14645334-C-A | ** | ||||||
hg38:Y:10974787-C-A | ** | ||||||
hg19:Y:8865961-G-T hg38:Y:8997920-G-T | ** | ||||||
hg19:Y:16309389-G-A hg38:Y:14197509-G-A | ** | ||||||
hg19:Y:17152858-C-A hg38:Y:15040978-C-A | ** | ||||||
hg19:Y:5170244-A-G hg38:Y:5302203-A-G | ** | ||||||
hg19:Y:23807437-G-T hg38:Y:21645551-G-T | ** | ||||||
hg38:Y:56874610-G-T | ** | ||||||
hg38:Y:11027298-C-T | ** | ||||||
hg19:Y:15557124-AATATATATATATAT-A hg38:Y:13445244-AATATATATATATAT-A | 19×AT | ** | |||||
hg38:Y:10817719-C-A | ** | ||||||
hg38:Y:10692166-C-A | ** | ||||||
hg38:Y:10744253-A-T | ** | ||||||
hg19:Y:17129937-C-A hg38:Y:15018057-C-A | ** | ||||||
hg19:Y:14397635-C-A hg38:Y:12276931-C-A | ** | ||||||
hg19:Y:14570756-ATTTTTTTT-A hg38:Y:12458956-ATTTTTTTT-A | 22×T | ** | |||||
hg19:Y:17142100-C-A hg38:Y:15030220-C-A | A19273 | ** | |||||
hg19:Y:14391762-C-A hg38:Y:12271058-C-A | ** | ||||||
hg38:Y:10945442-A-G | ** | ||||||
hg19:Y:16620366-C-A hg38:Y:14508486-C-A | ** | ||||||
hg38:Y:10807784-A-C | ** | ||||||
hg38:Y:10950722-C-A | ** | ||||||
hg19:Y:9559494-GT-G hg38:Y:9721885-GT-G | IR3_Prx | ** | |||||
hg38:Y:10862773-A-C | ** | ||||||
hg38:Y:10840706-A-C | ** | ||||||
hg19:Y:18747073-G-C hg38:Y:16635193-G-C | ** | ||||||
hg38:Y:10997218-G-C | ** | ||||||
hg38:Y:10997220-T-G | ** | ||||||
hg38:Y:10997225-T-C | ** | ||||||
hg19:Y:7996909-C-A hg38:Y:8128868-C-A | ** | ||||||
hg19:Y:18747062-T-C hg38:Y:16635182-T-C | Y102573 | ** | |||||
hg19:Y:18628016-C-A hg38:Y:16516136-C-A | ** | ||||||
hg19:Y:6697153-C-A hg38:Y:6829112-C-A | ** | ||||||
hg38:Y:11654218-C-A | DYZ17 | ** | |||||
hg38:Y:10887556-G-T | ** | ||||||
hg38:Y:10828612-T-A | ** | ||||||
hg19:Y:19531289-C-A hg38:Y:17419409-C-A | ** | ||||||
hg38:Y:11005502-C-T | ** | ||||||
hg19:Y:2684633-C-A hg38:Y:2816592-C-A | ** | ||||||
hg19:Y:2790501-C-G hg38:Y:2922460-C-G | ** | ||||||
hg19:Y:2941299-C-A hg38:Y:3073258-C-A | ** | ||||||
hg19:Y:2970781-C-A hg38:Y:3102740-C-A | ** | ||||||
hg19:Y:3202676-C-A hg38:Y:3334635-C-A | ** | ||||||
hg19:Y:3275742-G-T hg38:Y:3407701-G-T | ** | ||||||
hg19:Y:3280378-G-A hg38:Y:3412337-G-A | ** | ||||||
hg19:Y:3491285-C-A hg38:Y:3623244-C-A | ** | ||||||
hg19:Y:3825708-G-T hg38:Y:3957667-G-T | ** | ||||||
hg19:Y:3881620-C-A hg38:Y:4013579-C-A | ** | ||||||
hg19:Y:3918336-G-T hg38:Y:4050295-G-T | ** | ||||||
hg19:Y:3918406-G-T hg38:Y:4050365-G-T | ** | ||||||
hg19:Y:4002515-C-A hg38:Y:4134474-C-A | ** | ||||||
hg19:Y:4111175-G-T hg38:Y:4243134-G-T | ** | ||||||
hg19:Y:4223989-T-G hg38:Y:4355948-T-G | ** | ||||||
hg19:Y:4395455-G-A hg38:Y:4527414-G-A | ** | ||||||
hg19:Y:4446209-T-G hg38:Y:4578168-T-G | ** | ||||||
hg19:Y:4537735-T-C hg38:Y:4669694-T-C | ** | ||||||
hg19:Y:4537744-G-A hg38:Y:4669703-G-A | ** | ||||||
hg19:Y:4537761-A-AT hg38:Y:4669720-A-AT | ** | ||||||
hg19:Y:4537771-T-A hg38:Y:4669730-T-A | ** | ||||||
hg19:Y:4537776-T-G hg38:Y:4669735-T-G | ** | ||||||
hg19:Y:4537783-C-T hg38:Y:4669742-C-T | ** | ||||||
hg19:Y:4554697-C-A hg38:Y:4686656-C-A | ** | ||||||
hg19:Y:4569968-C-T hg38:Y:4701927-C-T | ** | ||||||
hg19:Y:4586030-A-C hg38:Y:4717989-A-C | ** | ||||||
hg19:Y:4788780-C-A hg38:Y:4920739-C-A | ** | ||||||
hg19:Y:4907916-C-T hg38:Y:5039875-C-T | ** | ||||||
hg19:Y:5062711-C-A hg38:Y:5194670-C-A | ** | ||||||
hg19:Y:5359959-G-A hg38:Y:5491918-G-A | ** | ||||||
hg19:Y:5675580-A-G hg38:Y:5807539-A-G | ** | ||||||
hg19:Y:5806094-GT-G hg38:Y:5938053-GT-G | 8×T | ** | |||||
hg19:Y:5824253-C-A hg38:Y:5956212-C-A | ** | ||||||
hg19:Y:5923813-T-C hg38:Y:6055772-T-C | ** | ||||||
hg19:Y:6096381-C-A hg38:Y:6228340-C-A | ** | ||||||
hg19:Y:6213766-C-A hg38:Y:6345725-C-A | IR3_Dst | ** | |||||
hg19:Y:6359252-T-G hg38:Y:6491211-T-G | ** | ||||||
hg19:Y:6402952-C-A hg38:Y:6534911-C-A | ** | ||||||
hg19:Y:6439011-G-T hg38:Y:6570970-G-T | ** | ||||||
hg19:Y:6491167-A-G hg38:Y:6623126-A-G | FTB39471 | ** | |||||
hg19:Y:6751482-T-G hg38:Y:6883441-T-G | ** | ||||||
hg19:Y:6765760-C-A hg38:Y:6897719-C-A | ** | ||||||
hg19:Y:6780687-C-T hg38:Y:6912646-C-T | ** | ||||||
hg19:Y:7082696-C-A hg38:Y:7214655-C-A | ** | ||||||
hg19:Y:7142859-C-A hg38:Y:7274818-C-A | ** | ||||||
hg19:Y:7159119-C-A hg38:Y:7291078-C-A | ** | ||||||
hg19:Y:7303824-C-A hg38:Y:7435783-C-A | ** | ||||||
hg19:Y:7311643-C-A hg38:Y:7443602-C-A | ** | ||||||
hg19:Y:7314497-T-G hg38:Y:7446456-T-G | ** | ||||||
hg19:Y:7428226-C-A hg38:Y:7560185-C-A | ** | ||||||
hg19:Y:7626201-G-T hg38:Y:7758160-G-T | ** | ||||||
hg19:Y:7724261-G-T hg38:Y:7856220-G-T | ** | ||||||
hg19:Y:8661701-C-A hg38:Y:8793660-C-A | ** | ||||||
hg19:Y:8673176-C-A hg38:Y:8805135-C-A | ** | ||||||
hg19:Y:9361051-G-T hg38:Y:9523442-G-T | ** | ||||||
hg19:Y:9465377-A-C hg38:Y:9627768-A-C | ** | ||||||
hg19:Y:9733727-G-T hg38:Y:9896118-G-T | BY28605 | IR3_Prx | ** | ||||
hg19:Y:9959195-G-T hg38:Y:10121586-G-T | ** | ||||||
hg38:Y:10629046-C-A | ** | ||||||
hg38:Y:10629063-A-T | ** | ||||||
hg38:Y:10629082-C-A | ** | ||||||
hg38:Y:10654050-T-A | ** | ||||||
hg38:Y:10654094-T-G | ** | ||||||
hg38:Y:10654096-C-T | ** | ||||||
hg38:Y:10661000-T-C | ** | ||||||
hg38:Y:10671896-C-A | ** | ||||||
hg38:Y:10676871-C-A | ** | ||||||
hg38:Y:10677930-C-A | ** | ||||||
hg38:Y:10692179-G-A | ** | ||||||
hg38:Y:10744236-C-T | ** | ||||||
hg38:Y:10744247-C-CTGTTG | ** | ||||||
hg38:Y:10749686-A-C | ** | ||||||
hg38:Y:10753518-T-TCACTC | ** | ||||||
hg38:Y:10753529-C-G | ** | ||||||
hg38:Y:10753554-C-A | ** | ||||||
hg38:Y:10757386-A-C | ** | ||||||
hg38:Y:10769960-G-C | ** | ||||||
hg38:Y:10770638-C-G | ** | ||||||
hg38:Y:10772415-T-C | ** | ||||||
hg38:Y:10773141-C-A | ** | ||||||
hg38:Y:10773219-C-A | ** | ||||||
hg38:Y:10775211-C-T | ** | ||||||
hg38:Y:10785340-C-A | ** | ||||||
hg38:Y:10786998-C-T | FGC79143 | ** | |||||
hg38:Y:10787005-C-A | FT73097 | ** | |||||
hg38:Y:10793888-T-C | ** | ||||||
hg38:Y:10801026-A-G | ** | ||||||
hg38:Y:10803984-TGCA-T | ** | ||||||
hg38:Y:10807802-C-T | ** | ||||||
hg38:Y:10811857-A-T | ** | ||||||
hg38:Y:10814272-G-C | FT432369 | ** | |||||
hg38:Y:10828583-T-A | ** | ||||||
hg38:Y:10828598-C-T | ** | ||||||
hg38:Y:10828615-G-C | ** | ||||||
hg38:Y:10829556-T-C | ** | ||||||
hg38:Y:10831240-C-A | ** | ||||||
hg38:Y:10831605-G-GCTC | ** | ||||||
hg38:Y:10840716-G-C | ** | ||||||
hg38:Y:10846863-C-T | ** | ||||||
hg38:Y:10846873-C-T | ** | ||||||
hg38:Y:10846875-C-A | ** | ||||||
hg38:Y:10846895-T-C | ** | ||||||
hg38:Y:10846900-T-C | ** | ||||||
hg38:Y:10846904-A-T | ** | ||||||
hg38:Y:10847403-G-A | ** | ||||||
hg38:Y:10847420-G-T | ** | ||||||
hg38:Y:10847681-C-A | ** | ||||||
hg38:Y:10862624-G-A | FTB39472 | ** | |||||
hg38:Y:10865212-C-A | ** | ||||||
hg38:Y:10870091-C-G | ** | ||||||
hg38:Y:10870093-C-A | ** | ||||||
hg38:Y:10870135-G-T | ** | ||||||
hg38:Y:10870481-C-A | ** | ||||||
hg38:Y:10879385-T-C | ** | ||||||
hg38:Y:10883142-C-G | ** | ||||||
hg38:Y:10885841-A-T | ** | ||||||
hg38:Y:10894478-T-G | ** | ||||||
hg38:Y:10894518-T-G | ** | ||||||
hg38:Y:10895423-C-A | ** | ||||||
hg38:Y:10901281-A-T | ** | ||||||
hg38:Y:10912624-T-G | ** | ||||||
hg38:Y:10922394-C-CACTGA | ** | ||||||
hg38:Y:10925705-A-C | ** | ||||||
hg38:Y:10942676-C-CCACCT | ** | ||||||
hg38:Y:10945179-T-C | ** | ||||||
hg38:Y:10946898-A-T | ** | ||||||
hg38:Y:10949527-C-T | ** | ||||||
hg38:Y:10950725-C-A | ** | ||||||
hg38:Y:10953781-C-A | ** | ||||||
hg38:Y:10953788-A-T | ** | ||||||
hg38:Y:10959615-T-A | ** | ||||||
hg38:Y:10961366-C-A | ** | ||||||
hg38:Y:10967443-C-A | ** | ||||||
hg38:Y:10969248-C-CACAAT | ** | ||||||
hg38:Y:10969270-C-A | ** | ||||||
hg38:Y:10972655-C-G | ** | ||||||
hg38:Y:10972676-C-T | ** | ||||||
hg38:Y:10974724-A-T | ** | ||||||
hg38:Y:10975771-C-A | ** | ||||||
hg38:Y:10983286-C-G | ** | ||||||
hg38:Y:10986232-C-A | ** | ||||||
hg38:Y:10987156-A-G | ** | ||||||
hg38:Y:10987164-C-A | ** | ||||||
hg38:Y:10996437-G-T | ** | ||||||
hg38:Y:11005476-T-C | ** | ||||||
hg38:Y:11005487-C-T | ** | ||||||
hg38:Y:11006075-T-C | ** | ||||||
hg38:Y:11006089-T-C | ** | ||||||
hg38:Y:11006099-T-C | ** | ||||||
hg38:Y:11006105-T-C | ** | ||||||
hg38:Y:11016369-C-T | ** | ||||||
hg38:Y:11017486-T-G | ** | ||||||
hg38:Y:11025077-G-A | ** | ||||||
hg38:Y:11025126-A-C | ** | ||||||
hg38:Y:11025128-C-A | ** | ||||||
hg38:Y:11025133-C-T | ** | ||||||
hg38:Y:11025134-T-G | ** | ||||||
hg38:Y:11025155-C-T | ** | ||||||
hg38:Y:11025293-C-CA | ** | ||||||
hg38:Y:11027304-T-A | ** | ||||||
hg38:Y:11027335-C-T | ** | ||||||
hg38:Y:11033391-G-C | ** | ||||||
hg38:Y:11034758-C-A | ** | ||||||
hg19:Y:13217141-C-T hg38:Y:11061465-C-T | ** | ||||||
hg19:Y:13221977-A-C hg38:Y:11066301-A-C | ** | ||||||
hg19:Y:13255562-C-T hg38:Y:11099886-C-T | ** | ||||||
hg19:Y:13445529-C-A hg38:Y:11289853-C-A | ** | ||||||
hg19:Y:13468092-A-G hg38:Y:11312416-A-G | ** | ||||||
hg19:Y:13475563-A-T hg38:Y:11319887-A-T | ** | ||||||
hg19:Y:13485679-A-T hg38:Y:11330003-A-T | ** | ||||||
hg19:Y:13485720-A-C hg38:Y:11330044-A-C | ** | ||||||
hg19:Y:13605747-A-G hg38:Y:11450071-A-G | ** | ||||||
hg38:Y:11643619-G-T | DYZ17 | ** | |||||
hg38:Y:11646126-T-A | DYZ17 | ** | |||||
hg19:Y:14025816-GGAAA-G hg38:Y:11905110-GGAAA-G | ** | ||||||
hg19:Y:14052105-A-G hg38:Y:11931399-A-G | ** | ||||||
hg19:Y:14073986-C-A hg38:Y:11953280-C-A | ** | ||||||
hg19:Y:14101275-T-C hg38:Y:11980569-T-C | ** | ||||||
hg19:Y:14427118-A-C hg38:Y:12306393-A-C | ** | ||||||
hg19:Y:14461217-C-A hg38:Y:12340490-C-A | ** | ||||||
hg19:Y:14501391-G-T hg38:Y:12389596-G-T | ** | ||||||
hg19:Y:14622807-C-T hg38:Y:12511005-C-T | ** | ||||||
hg19:Y:14705252-T-C hg38:Y:12593318-T-C | FTB33198 | ** | |||||
hg19:Y:14757498-G-A hg38:Y:12645567-G-A | ** | ||||||
hg19:Y:14835354-C-A hg38:Y:12723421-C-A | ** | ||||||
hg19:Y:14871353-C-A hg38:Y:12759423-C-A | ** | ||||||
hg19:Y:15044236-T-A hg38:Y:12932326-T-A | ** | ||||||
hg19:Y:15386518-C-A hg38:Y:13274638-C-A | ** | ||||||
hg19:Y:15495197-C-A hg38:Y:13383317-C-A | ** | ||||||
hg19:Y:15542126-C-A hg38:Y:13430246-C-A | ** | ||||||
hg19:Y:15584541-G-A hg38:Y:13472661-G-A | ** | ||||||
hg19:Y:15729182-C-A hg38:Y:13617302-C-A | ** | ||||||
hg19:Y:15770395-G-T hg38:Y:13658515-G-T | ** | ||||||
hg19:Y:15770612-T-G hg38:Y:13658732-T-G | ** | ||||||
hg19:Y:15852667-T-C hg38:Y:13740787-T-C | ** | ||||||
hg19:Y:15922320-T-G hg38:Y:13810440-T-G | ** | ||||||
hg19:Y:15922329-T-G hg38:Y:13810449-T-G | ** | ||||||
hg19:Y:16057000-C-A hg38:Y:13945120-C-A | ** | ||||||
hg19:Y:16063005-G-T hg38:Y:13951125-G-T | ** | ||||||
hg19:Y:16070598-T-G hg38:Y:13958718-T-G | ** | ||||||
hg19:Y:16070636-A-C hg38:Y:13958756-A-C | ** | ||||||
hg19:Y:16085595-C-A hg38:Y:13973715-C-A | ** | ||||||
hg19:Y:16562940-G-C hg38:Y:14451060-G-C | ** | ||||||
hg19:Y:16598885-A-G hg38:Y:14487005-A-G | ** | ||||||
hg19:Y:16623060-C-A hg38:Y:14511180-C-A | ** | ||||||
hg19:Y:16692786-A-C hg38:Y:14580906-A-C | ** | ||||||
hg19:Y:17127180-C-A hg38:Y:15015300-C-A | ** | ||||||
hg19:Y:17199902-T-C hg38:Y:15088022-T-C | ** | ||||||
hg19:Y:17199903-G-A hg38:Y:15088023-G-A | ** | ||||||
hg19:Y:17199910-T-G hg38:Y:15088030-T-G | ** | ||||||
hg19:Y:17199924-A-T hg38:Y:15088044-A-T | ** | ||||||
hg19:Y:17199935-T-A hg38:Y:15088055-T-A | ** | ||||||
hg19:Y:17199941-T-A hg38:Y:15088061-T-A | ** | ||||||
hg19:Y:17199943-G-A hg38:Y:15088063-G-A | ** | ||||||
hg19:Y:17199945-A-G hg38:Y:15088065-A-G | ** | ||||||
hg19:Y:17199951-G-A hg38:Y:15088071-G-A | ** | ||||||
hg19:Y:17199953-G-T hg38:Y:15088073-G-T | ** | ||||||
hg19:Y:17199960-C-T hg38:Y:15088080-C-T | ** | ||||||
hg19:Y:17199987-C-T hg38:Y:15088107-C-T | ** | ||||||
hg19:Y:17199991-A-C hg38:Y:15088111-A-C | ** | ||||||
hg19:Y:17200000-C-T hg38:Y:15088120-C-T | ** | ||||||
hg19:Y:17211611-C-A hg38:Y:15099731-C-A | ** | ||||||
hg19:Y:17215280-G-T hg38:Y:15103400-G-T | ** | ||||||
hg19:Y:17285153-G-A hg38:Y:15173273-G-A | ** | ||||||
hg19:Y:17430684-A-C hg38:Y:15318804-A-C | ** | ||||||
hg19:Y:17479187-C-T hg38:Y:15367307-C-T | ** | ||||||
hg19:Y:17567973-C-A hg38:Y:15456093-C-A | ** | ||||||
hg19:Y:17847468-C-A hg38:Y:15735588-C-A | ** | ||||||
hg19:Y:18154505-C-A hg38:Y:16042625-C-A | ** | ||||||
hg19:Y:18263853-TCTCA-T hg38:Y:16151973-TCTCA-T | ** | ||||||
hg19:Y:18747064-G-A hg38:Y:16635184-G-A | FTB60758 | ** | |||||
hg19:Y:18747077-A-G hg38:Y:16635197-A-G | ** | ||||||
hg19:Y:18747138-C-T hg38:Y:16635258-C-T | ** | ||||||
hg19:Y:18747145-T-A hg38:Y:16635265-T-A | ** | ||||||
hg19:Y:18817072-C-A hg38:Y:16705192-C-A | ** | ||||||
hg19:Y:19000055-CT-C hg38:Y:16888175-CT-C | ** | ||||||
hg19:Y:19418363-A-C hg38:Y:17306483-A-C | ** | ||||||
hg19:Y:19437819-G-T hg38:Y:17325939-G-T | ** | ||||||
hg19:Y:19609379-A-C hg38:Y:17497499-A-C | P5_Prx | ** | |||||
hg19:Y:19686221-CTTTT-C hg38:Y:17574341-CTTTT-C | P5_Prx | 16×T | ** | ||||
hg19:Y:19739287-G-T hg38:Y:17627407-G-T | P5_Prx | ** | |||||
hg19:Y:20420689-G-T hg38:Y:18258803-G-T | P5_Dst | ** | |||||
hg19:Y:20809809-CA-C hg38:Y:18647923-CA-C | P4_Gap | ** | |||||
hg19:Y:21164629-A-C hg38:Y:19002743-A-C | ** | ||||||
hg19:Y:21206988-C-A hg38:Y:19045102-C-A | ** | ||||||
hg19:Y:21244922-C-A hg38:Y:19083036-C-A | ** | ||||||
hg19:Y:21371621-A-C hg38:Y:19209735-A-C | ** | ||||||
hg19:Y:21435035-T-C hg38:Y:19273149-T-C | ** | ||||||
hg19:Y:21455366-C-A hg38:Y:19293480-C-A | ** | ||||||
hg19:Y:21552131-C-A hg38:Y:19390245-C-A | FT227384 | ** | |||||
hg19:Y:21738743-G-T hg38:Y:19576857-G-T | Y57143 | ** | |||||
hg19:Y:21834002-G-T hg38:Y:19672116-G-T | ** | ||||||
hg19:Y:22085617-T-G hg38:Y:19923731-T-G | ** | ||||||
hg19:Y:22209022-G-T hg38:Y:20047136-G-T | ** | ||||||
hg19:Y:22223283-C-A hg38:Y:20061397-C-A | DYZ19 | ** | |||||
hg19:Y:22471395-A-C hg38:Y:20309509-A-C | DYZ19 | ** | |||||
hg19:Y:22722441-T-G hg38:Y:20560555-T-G | ** | ||||||
hg19:Y:22722450-C-T hg38:Y:20560564-C-T | ** | ||||||
hg19:Y:22722451-A-G hg38:Y:20560565-A-G | ** | ||||||
hg19:Y:22722456-T-C hg38:Y:20560570-T-C | ** | ||||||
hg19:Y:22722468-T-A hg38:Y:20560582-T-A | ** | ||||||
hg19:Y:22722473-G-A hg38:Y:20560587-G-A | ** | ||||||
hg19:Y:22723401-AAAG-A hg38:Y:20561515-AAAG-A | ** | ||||||
hg19:Y:22811875-T-A hg38:Y:20649989-T-A | ** | ||||||
hg19:Y:22814933-C-A hg38:Y:20653047-C-A | ** | ||||||
hg19:Y:22841285-G-T hg38:Y:20679399-G-T | ** | ||||||
hg19:Y:22846069-C-A hg38:Y:20684183-C-A | ** | ||||||
hg19:Y:23086877-T-C hg38:Y:20924991-T-C | ** | ||||||
hg19:Y:23181493-C-A hg38:Y:21019607-C-A | ** | ||||||
hg19:Y:23305616-C-A hg38:Y:21143730-C-A | ** | ||||||
hg19:Y:23419183-G-T hg38:Y:21257297-G-T | ** | ||||||
hg19:Y:23439145-T-TC hg38:Y:21277259-T-TC | ** | ||||||
hg19:Y:23466416-G-T hg38:Y:21304530-G-T | ** | ||||||
hg19:Y:23505008-A-C hg38:Y:21343122-A-C | ** | ||||||
hg19:Y:24280879-CAAA-C hg38:Y:22134732-CAAA-C | P3_t1 | 22×A | ** | ||||
hg19:Y:24841475-T-A hg38:Y:22695328-T-A | IR1_R | ** | |||||
hg19:Y:26098879-T-C hg38:Y:23952732-T-C | P1_Y1 | ** | |||||
hg19:Y:28081881-C-CG hg38:Y:25935734-C-CG | P1_Y2 | ** | |||||
hg19:Y:28081884-ACACAC-A hg38:Y:25935737-ACACAC-A | P1_Y2 | ** | |||||
hg19:Y:28538024-G-T hg38:Y:26391877-G-T | ** | ||||||
hg19:Y:28550409-C-A hg38:Y:26404262-C-A | ** | ||||||
hg19:Y:28567331-CA-C hg38:Y:26421184-CA-C | ** | ||||||
hg19:Y:28657624-C-T hg38:Y:26511477-C-T | ** | ||||||
hg19:Y:28688458-C-A hg38:Y:26542311-C-A | ** | ||||||
hg19:Y:28727915-C-A hg38:Y:26581768-C-A | ** | ||||||
hg38:Y:56839008-G-A | ** | ||||||
hg38:Y:56839093-C-G | ** | ||||||
hg38:Y:56839186-G-T | ** | ||||||
hg38:Y:56850863-C-A | ** | ||||||
hg38:Y:56873768-G-T | ** | ||||||
hg38:Y2:31144-C-A | ** | ||||||
hg19:Y:26834532-A-AGAAG hg38:Y:24688385-A-AGAAG | P1_g2 | 12×GAAG | *** | ||||
hg19:Y:7925833-G-T hg38:Y:8057792-G-T | Y19622 | 11×T | *** | ||||
hg19:Y:22902107-GC-G hg38:Y:20740221-GC-G | *** | ||||||
hg19:Y:10022163-G-A hg38:Y:10184554-G-A | *** | ||||||
hg19:Y:6863818-CTTTTTTT-C hg38:Y:6995777-CTTTTTTT-C | 21×T | *** | |||||
hg19:Y:13461096-G-C hg38:Y:11305420-G-C | *** | ||||||
hg38:Y:10831551-C-A | *** | ||||||
hg19:Y:16441969-CTC-C,CTA hg38:Y:14330089-CTC-C,CTA | *** | ||||||
hg19:Y:23544846-CTTT-C hg38:Y:21382960-CTTT-C | 15×T | *** | |||||
hg38:Y:12631481-CTTT-C,CTT | 13×T | *** | |||||
hg38:Y:10995786-A-C,T | *** | ||||||
hg38:Y:10884716-TCACTC-T | *** | ||||||
hg19:Y:14698482-C-CA hg38:Y:12586548-C-CA | *** | ||||||
hg19:Y:9541021-CT-C hg38:Y:9703412-CT-C | IR3_Prx | 9×T | *** | ||||
hg38:Y:10744332-AC-A | *** | ||||||
hg19:Y:13461067-C-T hg38:Y:11305391-C-T | *** | ||||||
hg38:Y:10926688-C-GGGTTA | *** | ||||||
hg19:Y:21961660-C-A hg38:Y:19799774-C-A | *** | ||||||
hg19:Y:23367204-C-CT hg38:Y:21205318-C-CT | 8×T | *** | |||||
hg38:Y:11659614-C-A | DYZ17 | *** | |||||
hg19:Y:8080368-G-T hg38:Y:8212327-G-T | *** | ||||||
hg19:Y:13833872-C-G hg38:Y:11713166-C-G | BY25269 | DYZ17 | *** | ||||
hg19:Y:10024214-C-A hg38:Y:10186605-C-A | *** | ||||||
hg38:Y:10921734-C-A | *** | ||||||
hg19:Y:15257262-CA-C,CAA hg38:Y:13145346-CA-C,CAA | 14×A | *** | |||||
hg19:Y:4178176-CA-C hg38:Y:4310135-CA-C | 8×A | *** | |||||
hg19:Y:4243055-C-A hg38:Y:4375014-C-A | *** | ||||||
hg19:Y:8105080-TAA-T hg38:Y:8237039-TAA-T | 11×A | *** | |||||
hg19:Y:10022129-A-G hg38:Y:10184520-A-G | *** | ||||||
hg19:Y:10022132-A-G hg38:Y:10184523-A-G | *** | ||||||
hg38:Y:10667111-C-T | *** | ||||||
hg38:Y:10769395-C-A | *** | ||||||
hg38:Y:10797984-C-T | *** | ||||||
hg38:Y:10872526-C-A | *** | ||||||
hg38:Y:10948092-G-T | *** | ||||||
hg38:Y:10949929-C-A,G | *** | ||||||
hg38:Y:11023102-CA-C | *** | ||||||
hg19:Y:13468953-T-A hg38:Y:11313277-T-A | *** | ||||||
hg19:Y:13704964-A-G hg38:Y:11549288-A-G | DYZ17 | *** | |||||
hg19:Y:13721001-G-A hg38:Y:11565325-G-A | DYZ17 | *** | |||||
hg38:Y:11672614-A-G | DYZ17 | *** | |||||
hg19:Y:14443863-C-A hg38:Y:12323136-C-A | *** | ||||||
hg19:Y:14488773-CAA-C,CA hg38:Y:12368042-CAA-C,CA | 16×A | *** | |||||
hg19:Y:14831776-G-A hg38:Y:12719843-G-A | *** | ||||||
hg19:Y:15779856-C-A hg38:Y:13667976-C-A | *** | ||||||
hg19:Y:15951365-G-T hg38:Y:13839485-G-T | *** | ||||||
hg19:Y:16427383-C-A hg38:Y:14315503-C-A | *** | ||||||
hg19:Y:16527532-C-A hg38:Y:14415652-C-A | *** | ||||||
hg19:Y:17533824-G-GAA hg38:Y:15421944-G-GAA | 21×A | *** | |||||
hg19:Y:18707988-C-A hg38:Y:16596108-C-A | *** | ||||||
hg19:Y:21061869-CT-C hg38:Y:18899983-CT-C | *** | ||||||
hg19:Y:22526151-C-A hg38:Y:20364265-C-A | *** | ||||||
hg19:Y:22689770-T-C hg38:Y:20527884-T-C | *** | ||||||
hg19:Y:24503078-C-G hg38:Y:22356931-C-G | *** | ||||||
hg19:Y:27647561-C-A hg38:Y:25501414-C-A | P1_Y2 | *** | |||||
hg19:Y:28611756-C-A hg38:Y:26465609-C-A | *** | ||||||
hg38:Y:56880075-C-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 345404 | 9591328 | 7816577 | 7707859 |
Used in age calculations | 9591328 | 7816577 | 7707859 |
Counts of SNPs | 9 | 9 |
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