Johnson
BigY2: B61878MDKA Birth:
EnglandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 B61878 |
|---|---|---|---|---|---|---|---|
| hg19:Y:13687806-C-A hg38:Y:11532130-C-A | DYZ17 | A* | |||||
| hg19:Y:28817583-G-T hg38:Y:26671436-G-T | A* | ||||||
| hg19:Y:23801528-C-A hg38:Y:21639642-C-A | Y112350 | Y | + | ||||
| hg19:Y:18584330-A-AT hg38:Y:16472450-A-AT | 9×T | * | |||||
| hg19:Y:6381801-ATGTG-A hg38:Y:6513760-ATGTG-A | 16×TG | * | |||||
| hg19:Y:16242620-GTCTA-G,GTCTATTTT hg38:Y:14130740-GTCTA-G,GTCTATTTT | * | ||||||
| hg19:Y:22278642-A-C hg38:Y:20116756-A-C | FT454788 | DYZ19 | * | ||||
| hg19:Y:22295041-T-A hg38:Y:20133155-T-A | DYZ19 | ** | |||||
| hg19:Y:18872156-TTTTCTTTCTTTC-T hg38:Y:16760276-TTTTCTTTCTTTC-T | 16×TTTC | ** | |||||
| hg19:Y:23825064-A-T hg38:Y:21663178-A-T | 25×T | ** | |||||
| hg19:Y:5143006-C-T hg38:Y:5274965-C-T | FGC7826 | ** | |||||
| hg19:Y:22011582-C-A hg38:Y:19849696-C-A | ** | ||||||
| hg19:Y:13722716-A-T hg38:Y:11567040-A-T | DYZ17 | ** | |||||
| hg19:Y:27967355-TAGAG-T hg38:Y:25821208-TAGAG-T | P1_Y2 | 14×AG | ** | ||||
| hg19:Y:15252823-C-A hg38:Y:13140909-C-A | ** | ||||||
| hg19:Y:22341976-C-T hg38:Y:20180090-C-T | DYZ19 | ** | |||||
| hg19:Y:22341994-A-T hg38:Y:20180108-A-T | DYZ19 | ** | |||||
| hg19:Y:22341993-T-G hg38:Y:20180107-T-G | DYZ19 | ** | |||||
| hg19:Y:3330251-GT-G hg38:Y:3462210-GT-G | 12×T | ** | |||||
| hg19:Y:9930097-G-A hg38:Y:10092488-G-A | ** | ||||||
| hg19:Y:9930110-G-T hg38:Y:10092501-G-T | ** | ||||||
| hg19:Y:28742512-A-ATT hg38:Y:26596365-A-ATT | 14×T | ** | |||||
| hg19:Y:16021324-G-T hg38:Y:13909444-G-T | ** | ||||||
| hg19:Y:14933671-C-. hg38:Y:12821736-A-C | ** | ||||||
| hg19:Y:24416893-C-A hg38:Y:22270746-C-A | ** | ||||||
| hg19:Y:18728870-C-A hg38:Y:16616990-C-A | ** | ||||||
| hg19:Y:17370816-C-A hg38:Y:15258936-C-A | ** | ||||||
| hg38:Y:10667040-A-T | ** | ||||||
| hg38:Y:10842544-C-A | ** | ||||||
| hg38:Y:10667019-C-CGGATTA | ** | ||||||
| hg38:Y:10954313-T-A | FT438035 | ** | |||||
| hg38:Y:10954321-C-G | ** | ||||||
| hg38:Y:10954335-C-A | ** | ||||||
| hg38:Y:10685586-G-C | ** | ||||||
| hg38:Y:10792780-T-C | ** | ||||||
| hg38:Y:10792785-T-C | ** | ||||||
| hg19:Y:13460607-G-A hg38:Y:11304931-G-A | ** | ||||||
| hg19:Y:13460624-A-G hg38:Y:11304948-A-G | ** | ||||||
| hg19:Y:15218600-C-A hg38:Y:13106686-C-A | ** | ||||||
| hg19:Y:14350117-C-A hg38:Y:12229412-C-A | ** | ||||||
| hg38:Y:10879859-A-T | ** | ||||||
| hg19:Y:17043026-C-A hg38:Y:14931146-C-A | ** | ||||||
| hg19:Y:16602658-C-A hg38:Y:14490778-C-A | ** | ||||||
| hg19:Y:19377130-TGGAG-T hg38:Y:17265250-TGGAG-T | 4×GGAG | ** | |||||
| hg38:Y:10846814-G-C | ** | ||||||
| hg38:Y:10846828-A-G | ** | ||||||
| hg38:Y:10846850-C-T | ** | ||||||
| hg38:Y:10846852-C-A | ** | ||||||
| hg38:Y:10846861-T-C | ** | ||||||
| hg19:Y:15212395-C-A hg38:Y:13100481-C-A | ** | ||||||
| hg38:Y:10859396-G-T | ** | ||||||
| hg38:Y:10761198-A-G | ** | ||||||
| hg38:Y:10889314-A-T | ** | ||||||
| hg19:Y:13329522-G-T hg38:Y:11173846-G-T | ** | ||||||
| hg19:Y:16942115-C-A hg38:Y:14830235-C-A | ** | ||||||
| hg38:Y:10882027-G-T | ** | ||||||
| hg19:Y:24637405-T-TC hg38:Y:22491258-T-TC | P3_t2 | ** | |||||
| hg19:Y:28530808-C-A hg38:Y:26384661-C-A | ** | ||||||
| hg19:Y:20230555-T-A hg38:Y:18068669-T-A | P5_Dst | ** | |||||
| hg38:Y:10812377-G-T | ** | ||||||
| hg19:Y:28763827-C-A hg38:Y:26617680-C-A | ** | ||||||
| hg38:Y:10825300-C-G | ** | ||||||
| hg38:Y:11032242-C-T | ** | ||||||
| hg19:Y:21134913-C-A hg38:Y:18973027-C-A | ** | ||||||
| hg38:Y:10761139-A-T | ** | ||||||
| hg38:Y:10761162-C-G | ** | ||||||
| hg38:Y:10761170-T-C | ** | ||||||
| hg38:Y:10761200-C-G | ** | ||||||
| hg19:Y:24421031-C-T hg38:Y:22274884-C-T | ** | ||||||
| hg38:Y:10792443-A-T | ** | ||||||
| hg19:Y:20669281-GTT-G hg38:Y:18507395-GTT-G | P4_Prx | ** | |||||
| hg19:Y:15558077-C-A hg38:Y:13446197-C-A | ** | ||||||
| hg38:Y:10987763-C-A | ** | ||||||
| hg38:Y:10983990-C-CTCTGA | ** | ||||||
| hg19:Y:9502545-G-T hg38:Y:9664936-G-T | ** | ||||||
| hg38:Y:11013968-T-C | ** | ||||||
| hg38:Y:11013972-C-G | ** | ||||||
| hg38:Y:11013976-A-G | ** | ||||||
| hg19:Y:7257871-C-A hg38:Y:7389830-C-A | Y83738 | ** | |||||
| hg19:Y:19246986-C-A hg38:Y:17135106-C-A | ** | ||||||
| hg19:Y:16848422-C-A hg38:Y:14736542-C-A | ** | ||||||
| hg19:Y:7134033-C-A hg38:Y:7265992-C-A | ** | ||||||
| hg38:Y:10943309-C-T | ** | ||||||
| hg19:Y:21540971-G-T hg38:Y:19379085-G-T | FT339221 | ** | |||||
| hg19:Y:13713433-G-T hg38:Y:11557757-G-T | DYZ17 | ** | |||||
| hg38:Y:10801646-C-T | ** | ||||||
| hg38:Y:10821850-T-C | ** | ||||||
| hg38:Y:10987765-A-C | ** | ||||||
| hg19:Y:3405586-C-A hg38:Y:3537545-C-A | ** | ||||||
| hg19:Y:18703215-C-A hg38:Y:16591335-C-A | ** | ||||||
| hg38:Y:10651621-G-A | ** | ||||||
| hg38:Y:10651622-G-C | ** | ||||||
| hg38:Y:11032203-A-T | ** | ||||||
| hg38:Y:10967522-C-A | ** | ||||||
| hg19:Y:7131278-C-A hg38:Y:7263237-C-A | ** | ||||||
| hg19:Y:13484736-C-A hg38:Y:11329060-C-A | ** | ||||||
| hg19:Y:3728630-G-T hg38:Y:3860589-G-T | ** | ||||||
| hg19:Y:14343924-C-A hg38:Y:12223219-C-A | ** | ||||||
| hg19:Y:14608006-T-C hg38:Y:12496208-T-C | ** | ||||||
| hg19:Y:14858664-GA-G hg38:Y:12746730-GA-G | ** | ||||||
| hg19:Y:24602322-T-TG hg38:Y:22456175-T-TG | P3_t2 | ** | |||||
| hg19:Y:4750017-G-T hg38:Y:4881976-G-T | ** | ||||||
| hg19:Y:23315969-C-A hg38:Y:21154083-C-A | ** | ||||||
| hg19:Y:6757224-C-A hg38:Y:6889183-C-A | ** | ||||||
| hg38:Y:10796636-C-G | ** | ||||||
| hg38:Y:10967507-C-G | ** | ||||||
| hg38:Y:10894312-T-A | ** | ||||||
| hg38:Y:11021617-G-C | ** | ||||||
| hg19:Y:22188996-C-A hg38:Y:20027110-C-A | ** | ||||||
| hg19:Y:20242444-G-T hg38:Y:18080558-G-T | P5_Dst | ** | |||||
| hg19:Y:28687385-C-A hg38:Y:26541238-C-A | ** | ||||||
| hg38:Y:11003137-C-G | ** | ||||||
| hg19:Y:5691050-C-A hg38:Y:5823009-C-A | ** | ||||||
| hg38:Y:10687143-C-A | ** | ||||||
| hg38:Y:10810668-T-C | ** | ||||||
| hg38:Y:10810680-C-G | ** | ||||||
| hg38:Y:10810716-C-G | ** | ||||||
| hg19:Y:19135340-C-A hg38:Y:17023460-C-A | ** | ||||||
| hg19:Y:14153033-C-A hg38:Y:12032327-C-A | ** | ||||||
| hg19:Y:20579118-T-TCA hg38:Y:18417232-T-TCA | P5_Dst | ** | |||||
| hg19:Y:13410526-C-A hg38:Y:11254850-C-A | ** | ||||||
| hg19:Y:13476175-T-A hg38:Y:11320499-T-A | ** | ||||||
| hg38:Y:10785298-C-A | ** | ||||||
| hg38:Y:10954309-T-TCCCAA | ** | ||||||
| hg38:Y:10685613-C-A | ** | ||||||
| hg38:Y:10982445-T-C | ** | ||||||
| hg19:Y:22816363-TCTCA-T hg38:Y:20654477-TCTCA-T | ** | ||||||
| hg38:Y:11021867-C-A | ** | ||||||
| hg19:Y:21912181-C-A hg38:Y:19750295-C-A | ** | ||||||
| hg38:Y:10808836-C-A | ** | ||||||
| hg19:Y:22167295-C-A hg38:Y:20005409-C-A | ** | ||||||
| hg19:Y:16625850-C-A hg38:Y:14513970-C-A | ** | ||||||
| hg19:Y:14606518-C-A hg38:Y:12494720-C-A | ** | ||||||
| hg38:Y:11000449-A-C | ** | ||||||
| hg19:Y:15608171-A-C hg38:Y:13496291-A-C | ** | ||||||
| hg19:Y:2684324-G-T hg38:Y:2816283-G-T | ** | ||||||
| hg19:Y:2708087-T-C hg38:Y:2840046-T-C | Y81253 | ** | |||||
| hg19:Y:2948880-C-A hg38:Y:3080839-C-A | ** | ||||||
| hg19:Y:3030352-C-A hg38:Y:3162311-C-A | ** | ||||||
| hg19:Y:3099278-G-C hg38:Y:3231237-G-C | ** | ||||||
| hg19:Y:3109392-G-T hg38:Y:3241351-G-T | ** | ||||||
| hg19:Y:3109409-G-T hg38:Y:3241368-G-T | ** | ||||||
| hg19:Y:3110326-G-T hg38:Y:3242285-G-T | ** | ||||||
| hg19:Y:3273868-G-T hg38:Y:3405827-G-T | ** | ||||||
| hg19:Y:3285913-C-A hg38:Y:3417872-C-A | ** | ||||||
| hg19:Y:3332707-C-A hg38:Y:3464666-C-A | ** | ||||||
| hg19:Y:3343826-C-A hg38:Y:3475785-C-A | ** | ||||||
| hg19:Y:3403821-G-T hg38:Y:3535780-G-T | ** | ||||||
| hg19:Y:3429698-G-T hg38:Y:3561657-G-T | ** | ||||||
| hg19:Y:3477331-A-G hg38:Y:3609290-A-G | ** | ||||||
| hg19:Y:3500055-G-T hg38:Y:3632014-G-T | ** | ||||||
| hg19:Y:3510707-G-T hg38:Y:3642666-G-T | ** | ||||||
| hg19:Y:3576606-G-T hg38:Y:3708565-G-T | ** | ||||||
| hg19:Y:3726433-C-A hg38:Y:3858392-C-A | ** | ||||||
| hg19:Y:3815448-C-A hg38:Y:3947407-C-A | ** | ||||||
| hg19:Y:3965855-C-A hg38:Y:4097814-C-A | ** | ||||||
| hg19:Y:4342600-C-A hg38:Y:4474559-C-A | ** | ||||||
| hg19:Y:4445086-C-A hg38:Y:4577045-C-A | ** | ||||||
| hg19:Y:4452630-G-T hg38:Y:4584589-G-T | ** | ||||||
| hg19:Y:4457020-G-T hg38:Y:4588979-G-T | ** | ||||||
| hg19:Y:4457078-G-T hg38:Y:4589037-G-T | ** | ||||||
| hg19:Y:4557425-C-A hg38:Y:4689384-C-A | ** | ||||||
| hg19:Y:4603020-G-T hg38:Y:4734979-G-T | ** | ||||||
| hg19:Y:4749510-C-A hg38:Y:4881469-C-A | ** | ||||||
| hg19:Y:4888668-G-C hg38:Y:5020627-G-C | ** | ||||||
| hg19:Y:5078327-C-A hg38:Y:5210286-C-A | ** | ||||||
| hg19:Y:5161404-CAA-C hg38:Y:5293363-CAA-C | ** | ||||||
| hg19:Y:5166167-A-G hg38:Y:5298126-A-G | ** | ||||||
| hg19:Y:5236295-C-A hg38:Y:5368254-C-A | ** | ||||||
| hg19:Y:5332227-T-C hg38:Y:5464186-T-C | ** | ||||||
| hg19:Y:5468681-T-TA hg38:Y:5600640-T-TA | 8×A | ** | |||||
| hg19:Y:5510186-C-A hg38:Y:5642145-C-A | ** | ||||||
| hg19:Y:5619057-G-T hg38:Y:5751016-G-T | ** | ||||||
| hg19:Y:5645110-C-A hg38:Y:5777069-C-A | ** | ||||||
| hg19:Y:5722806-G-T hg38:Y:5854765-G-T | ** | ||||||
| hg19:Y:5722989-C-A hg38:Y:5854948-C-A | ** | ||||||
| hg19:Y:5756081-T-G hg38:Y:5888040-T-G | ** | ||||||
| hg19:Y:5901035-G-T hg38:Y:6032994-G-T | ** | ||||||
| hg19:Y:5915369-G-T hg38:Y:6047328-G-T | ** | ||||||
| hg19:Y:5943351-G-T hg38:Y:6075310-G-T | ** | ||||||
| hg19:Y:6056779-C-A hg38:Y:6188738-C-A | ** | ||||||
| hg19:Y:6062736-C-A hg38:Y:6194695-C-A | ** | ||||||
| hg19:Y:6502002-C-A hg38:Y:6633961-C-A | ** | ||||||
| hg19:Y:6541269-C-T hg38:Y:6673228-C-T | ** | ||||||
| hg19:Y:6770031-C-A hg38:Y:6901990-C-A | ** | ||||||
| hg19:Y:7043381-A-G hg38:Y:7175340-A-G | ** | ||||||
| hg19:Y:7044032-T-G hg38:Y:7175991-T-G | ** | ||||||
| hg19:Y:7098756-C-A hg38:Y:7230715-C-A | ** | ||||||
| hg19:Y:7138943-C-A hg38:Y:7270902-C-A | ** | ||||||
| hg19:Y:7166074-C-A hg38:Y:7298033-C-A | ** | ||||||
| hg19:Y:7166898-C-A hg38:Y:7298857-C-A | ** | ||||||
| hg19:Y:7206853-C-A hg38:Y:7338812-C-A | 8×T | ** | |||||
| hg19:Y:7237262-G-A hg38:Y:7369221-G-A | ** | ||||||
| hg19:Y:7238314-C-T hg38:Y:7370273-C-T | ** | ||||||
| hg19:Y:7320473-A-C hg38:Y:7452432-A-C | ** | ||||||
| hg19:Y:7861667-C-A hg38:Y:7993626-C-A | ** | ||||||
| hg19:Y:8072429-C-A hg38:Y:8204388-C-A | ** | ||||||
| hg19:Y:8166958-T-C hg38:Y:8298917-T-C | ** | ||||||
| hg19:Y:8724071-TACATTTTAAAAATATGATATG-T hg38:Y:8856030-TACATTTTAAAAATATGATATG-T | ** | ||||||
| hg19:Y:8848220-CTCTGT-C hg38:Y:8980179-CTCTGT-C | ** | ||||||
| hg38:Y:9108104-C-A | ** | ||||||
| hg38:Y:9120500-G-T | ** | ||||||
| hg19:Y:9493511-CTT-C hg38:Y:9655902-CTT-C | ** | ||||||
| hg19:Y:9595084-TTTTTTTCTGGTA-T hg38:Y:9757475-TTTTTTTCTGGTA-T | IR3_Prx | ** | |||||
| hg19:Y:10083812-G-C hg38:Y:10246203-G-C | ** | ||||||
| hg38:Y:10653381-C-A | ** | ||||||
| hg38:Y:10664737-C-A | ** | ||||||
| hg38:Y:10669435-A-AC | ** | ||||||
| hg38:Y:10677730-C-T | ** | ||||||
| hg38:Y:10687834-C-A | ** | ||||||
| hg38:Y:10693163-A-C | ** | ||||||
| hg38:Y:10752449-C-A | ** | ||||||
| hg38:Y:10755598-ACTTTATTC-A | ** | ||||||
| hg38:Y:10756147-C-T | ** | ||||||
| hg38:Y:10757840-C-A | ** | ||||||
| hg38:Y:10769500-A-C | ** | ||||||
| hg38:Y:10770658-C-T | ** | ||||||
| hg38:Y:10770675-C-T | ** | ||||||
| hg38:Y:10782933-T-C | ** | ||||||
| hg38:Y:10786930-C-A | ** | ||||||
| hg38:Y:10787399-C-T | ** | ||||||
| hg38:Y:10788382-G-T | ** | ||||||
| hg38:Y:10792444-T-C | ** | ||||||
| hg38:Y:10814110-C-A | ** | ||||||
| hg38:Y:10818092-C-A | ** | ||||||
| hg38:Y:10821734-T-C | ** | ||||||
| hg38:Y:10821854-T-A | ** | ||||||
| hg38:Y:10826749-C-T | FT432943 | ** | |||||
| hg38:Y:10827009-C-A | ** | ||||||
| hg38:Y:10828927-C-A | ** | ||||||
| hg38:Y:10837375-C-A | ** | ||||||
| hg38:Y:10838146-C-A | ** | ||||||
| hg38:Y:10846024-T-G | ** | ||||||
| hg38:Y:10849107-C-A | ** | ||||||
| hg38:Y:10852449-C-A | FT434171 | ** | |||||
| hg38:Y:10866234-CT-C | ** | ||||||
| hg38:Y:10874066-C-A | ** | ||||||
| hg38:Y:10879670-C-A | ** | ||||||
| hg38:Y:10879845-G-A | ** | ||||||
| hg38:Y:10879853-C-T | ** | ||||||
| hg38:Y:10879873-C-T | ** | ||||||
| hg38:Y:10879882-A-C | ** | ||||||
| hg38:Y:10879892-C-G | ** | ||||||
| hg38:Y:10881174-G-T | ** | ||||||
| hg38:Y:10881179-G-T | FT91951 | ** | |||||
| hg38:Y:10881184-G-T | FT435334 | ** | |||||
| hg38:Y:10882032-C-G | ** | ||||||
| hg38:Y:10892984-C-A | ** | ||||||
| hg38:Y:10893866-C-A | ** | ||||||
| hg38:Y:10902456-C-A | ** | ||||||
| hg38:Y:10909554-C-A | ** | ||||||
| hg38:Y:10910415-G-T | ** | ||||||
| hg38:Y:10915128-G-T | ** | ||||||
| hg38:Y:10918457-T-G | ** | ||||||
| hg38:Y:10919915-G-A | ** | ||||||
| hg38:Y:10925783-C-T | ** | ||||||
| hg38:Y:10925792-T-C | ** | ||||||
| hg38:Y:10928930-C-A | ** | ||||||
| hg38:Y:10939612-C-A | ** | ||||||
| hg38:Y:10939991-C-A | ** | ||||||
| hg38:Y:10941185-C-CCTTTG | ** | ||||||
| hg38:Y:10941194-T-A | ** | ||||||
| hg38:Y:10941196-C-CAATAA | ** | ||||||
| hg38:Y:10941206-T-C | ** | ||||||
| hg38:Y:10941213-T-C | ** | ||||||
| hg38:Y:10941218-T-C | ** | ||||||
| hg38:Y:10941233-T-C | ** | ||||||
| hg38:Y:10943308-T-C | ** | ||||||
| hg38:Y:10943315-C-T | ** | ||||||
| hg38:Y:10949770-T-A | ** | ||||||
| hg38:Y:10950976-C-A | ** | ||||||
| hg38:Y:10952067-C-T | FT437924 | ** | |||||
| hg38:Y:10952311-CT-C | ** | ||||||
| hg38:Y:10953089-G-T | ** | ||||||
| hg38:Y:10954329-T-C | ** | ||||||
| hg38:Y:10955618-C-A | ** | ||||||
| hg38:Y:10962588-C-A | ** | ||||||
| hg38:Y:10971599-T-G | ** | ||||||
| hg38:Y:10972576-A-T | ** | ||||||
| hg38:Y:10974631-C-A | ** | ||||||
| hg38:Y:10976959-G-C | ** | ||||||
| hg38:Y:10979049-C-A | ** | ||||||
| hg38:Y:10981373-C-A | ** | ||||||
| hg38:Y:10994244-CCATTG-C | ** | ||||||
| hg38:Y:11000428-C-A | ** | ||||||
| hg38:Y:11001755-G-C | ** | ||||||
| hg38:Y:11001763-C-G | ** | ||||||
| hg38:Y:11001765-G-C | ** | ||||||
| hg38:Y:11034703-C-T | ** | ||||||
| hg19:Y:13231747-C-A hg38:Y:11076071-C-A | ** | ||||||
| hg19:Y:13234642-C-A hg38:Y:11078966-C-A | ** | ||||||
| hg19:Y:13273099-C-A hg38:Y:11117423-C-A | ** | ||||||
| hg19:Y:13311861-A-C hg38:Y:11156185-A-C | ** | ||||||
| hg19:Y:13324792-G-A hg38:Y:11169116-G-A | FT442914 | ** | |||||
| hg19:Y:13373402-G-T hg38:Y:11217726-G-T | ** | ||||||
| hg19:Y:13482066-A-C hg38:Y:11326390-A-C | ** | ||||||
| hg19:Y:13484708-G-T hg38:Y:11329032-G-T | ** | ||||||
| hg19:Y:13484746-C-G hg38:Y:11329070-C-G | ** | ||||||
| hg19:Y:13484751-C-A hg38:Y:11329075-C-A | ** | ||||||
| hg19:Y:13558131-C-A hg38:Y:11402455-C-A | ** | ||||||
| hg19:Y:13689705-A-T hg38:Y:11534029-A-T | FT268721 | DYZ17 | ** | ||||
| hg19:Y:13722702-C-G hg38:Y:11567026-C-G | DYZ17 | ** | |||||
| hg38:Y:11668228-G-T | DYZ17 | ** | |||||
| hg38:Y:11668238-G-T | DYZ17 | ** | |||||
| hg38:Y:11672173-G-A | DYZ17 | ** | |||||
| hg38:Y:11676449-C-A | DYZ17 | ** | |||||
| hg19:Y:13934849-A-G hg38:Y:11814143-A-G | Y89893 | ** | |||||
| hg19:Y:13972848-G-T hg38:Y:11852142-G-T | ** | ||||||
| hg19:Y:13974688-T-A hg38:Y:11853982-T-A | ** | ||||||
| hg19:Y:14021251-C-A hg38:Y:11900545-C-A | ** | ||||||
| hg19:Y:14089249-C-A hg38:Y:11968543-C-A | ** | ||||||
| hg19:Y:14149236-G-A hg38:Y:12028530-G-A | ** | ||||||
| hg19:Y:14152266-G-A hg38:Y:12031560-G-A | ** | ||||||
| hg19:Y:14257065-A-G hg38:Y:12136359-A-G | ** | ||||||
| hg19:Y:14355545-TGGG-T hg38:Y:12234840-TGGG-T | ** | ||||||
| hg19:Y:14381066-G-T hg38:Y:12260362-G-T | ** | ||||||
| hg19:Y:14428090-T-G hg38:Y:12307365-T-G | ** | ||||||
| hg19:Y:14428120-T-G hg38:Y:12307395-T-G | ** | ||||||
| hg19:Y:14445268-T-A hg38:Y:12324541-T-A | ** | ||||||
| hg19:Y:14451162-C-A hg38:Y:12330435-C-A | ** | ||||||
| hg19:Y:14483393-C-A hg38:Y:12362662-C-A | ** | ||||||
| hg38:Y:12375401-T-C | ** | ||||||
| hg19:Y:14517799-C-A hg38:Y:12406000-C-A | ** | ||||||
| hg19:Y:14532051-A-C hg38:Y:12420252-A-C | ** | ||||||
| hg19:Y:14553071-C-A hg38:Y:12441272-C-A | ** | ||||||
| hg19:Y:14563471-TC-T hg38:Y:12451671-TC-T | ** | ||||||
| hg19:Y:14570767-T-A hg38:Y:12458967-T-A | ** | ||||||
| hg19:Y:14570959-C-A hg38:Y:12459159-C-A | ** | ||||||
| hg19:Y:14607989-C-T hg38:Y:12496191-C-T | ** | ||||||
| hg19:Y:14607994-G-A hg38:Y:12496196-G-A | ** | ||||||
| hg19:Y:14635626-C-T hg38:Y:12523695-C-T | ** | ||||||
| hg19:Y:15041102-C-A hg38:Y:12929192-C-A | ** | ||||||
| hg19:Y:15045631-A-G hg38:Y:12933721-A-G | ** | ||||||
| hg19:Y:15157656-C-G hg38:Y:13045743-C-G | ** | ||||||
| hg19:Y:15183949-C-A hg38:Y:13072035-C-A | ** | ||||||
| hg19:Y:15233971-C-A hg38:Y:13122057-C-A | ** | ||||||
| hg19:Y:15252824-T-TA hg38:Y:13140910-T-TA | ** | ||||||
| hg19:Y:15280113-C-A hg38:Y:13168212-C-A | ** | ||||||
| hg19:Y:15333754-G-T hg38:Y:13221872-G-T | ** | ||||||
| hg19:Y:15364755-C-A hg38:Y:13252875-C-A | ** | ||||||
| hg19:Y:15411323-A-C hg38:Y:13299443-A-C | ** | ||||||
| hg19:Y:15532398-C-A hg38:Y:13420518-C-A | ** | ||||||
| hg19:Y:15606746-C-A hg38:Y:13494866-C-A | ** | ||||||
| hg19:Y:15762462-C-A hg38:Y:13650582-C-A | ** | ||||||
| hg19:Y:15769091-C-A hg38:Y:13657211-C-A | ** | ||||||
| hg19:Y:16114659-T-A hg38:Y:14002779-T-A | P8_Prx | ** | |||||
| hg19:Y:16258998-C-A hg38:Y:14147118-C-A | ** | ||||||
| hg19:Y:16271871-A-G hg38:Y:14159991-A-G | ** | ||||||
| hg19:Y:16417452-G-A hg38:Y:14305572-G-A | ** | ||||||
| hg19:Y:16432828-C-A hg38:Y:14320948-C-A | ** | ||||||
| hg19:Y:16539690-C-A hg38:Y:14427810-C-A | ** | ||||||
| hg19:Y:16602794-T-C hg38:Y:14490914-T-C | ** | ||||||
| hg19:Y:16605502-G-T hg38:Y:14493622-G-T | ** | ||||||
| hg19:Y:16654618-C-A hg38:Y:14542738-C-A | ** | ||||||
| hg19:Y:16884040-T-C hg38:Y:14772160-T-C | ** | ||||||
| hg19:Y:16932174-C-A hg38:Y:14820294-C-A | ** | ||||||
| hg19:Y:16972105-G-T hg38:Y:14860225-G-T | ** | ||||||
| hg19:Y:17098916-T-G hg38:Y:14987036-T-G | ** | ||||||
| hg19:Y:17588703-T-G hg38:Y:15476823-T-G | ** | ||||||
| hg19:Y:17588916-T-C hg38:Y:15477036-T-C | ** | ||||||
| hg19:Y:17601341-T-C hg38:Y:15489461-T-C | ** | ||||||
| hg19:Y:17737505-C-A hg38:Y:15625625-C-A | ** | ||||||
| hg19:Y:17838724-G-T hg38:Y:15726844-G-T | ** | ||||||
| hg19:Y:17859316-C-A hg38:Y:15747436-C-A | ** | ||||||
| hg19:Y:18008668-TTTTTTTTG-T hg38:Y:15896788-TTTTTTTTG-T | P7_Dst | ** | |||||
| hg19:Y:18165850-C-T hg38:Y:16053970-C-T | ** | ||||||
| hg19:Y:18253380-A-C hg38:Y:16141500-A-C | ** | ||||||
| hg19:Y:18343564-C-A hg38:Y:16231684-C-A | P6_Prx | ** | |||||
| hg19:Y:18825690-GAAAT-G hg38:Y:16713810-GAAAT-G | ** | ||||||
| hg19:Y:18892467-T-G hg38:Y:16780587-T-G | ** | ||||||
| hg19:Y:18905392-A-C hg38:Y:16793512-A-C | ** | ||||||
| hg19:Y:19043786-CTACCAGA-C hg38:Y:16931906-CTACCAGA-C | ** | ||||||
| hg19:Y:19213568-C-A hg38:Y:17101688-C-A | ** | ||||||
| hg19:Y:19327157-T-A hg38:Y:17215277-T-A | ** | ||||||
| hg19:Y:19505251-T-C hg38:Y:17393371-T-C | ** | ||||||
| hg19:Y:19530387-C-G hg38:Y:17418507-C-G | ** | ||||||
| hg19:Y:19554394-T-G hg38:Y:17442514-T-G | ** | ||||||
| hg19:Y:19554421-C-A hg38:Y:17442541-C-A | ** | ||||||
| hg19:Y:19622119-C-T hg38:Y:17510239-C-T | P5_Prx | ** | |||||
| hg19:Y:19678903-C-A hg38:Y:17567023-C-A | P5_Prx | ** | |||||
| hg19:Y:20022440-AAGC-A hg38:Y:17910560-AAGC-A | P5_Prx | ** | |||||
| hg19:Y:20392730-AC-A hg38:Y:18230844-AC-A | P5_Dst | ** | |||||
| hg19:Y:20569523-G-T hg38:Y:18407637-G-T | P5_Dst | ** | |||||
| hg19:Y:20625316-TTTTTTTC-T hg38:Y:18463430-TTTTTTTC-T | P4_Prx | ** | |||||
| hg19:Y:20750705-T-G hg38:Y:18588819-T-G | P4_Prx | ** | |||||
| hg19:Y:20755479-G-T hg38:Y:18593593-G-T | P4_Prx | ** | |||||
| hg19:Y:20815816-C-T hg38:Y:18653930-C-T | FT272582 | P4_Gap | ** | ||||
| hg19:Y:20845338-C-A hg38:Y:18683452-C-A | P4_Dst | ** | |||||
| hg19:Y:21029209-C-A hg38:Y:18867323-C-A | P4_Dst | ** | |||||
| hg19:Y:21037336-T-C hg38:Y:18875450-T-C | ** | ||||||
| hg19:Y:21118692-G-A hg38:Y:18956806-G-A | ** | ||||||
| hg19:Y:21162850-C-A hg38:Y:19000964-C-A | ** | ||||||
| hg19:Y:21216836-C-A hg38:Y:19054950-C-A | ** | ||||||
| hg19:Y:21247780-C-A hg38:Y:19085894-C-A | ** | ||||||
| hg19:Y:21458593-C-A hg38:Y:19296707-C-A | ** | ||||||
| hg19:Y:21910651-C-A hg38:Y:19748765-C-A | ** | ||||||
| hg19:Y:21929600-GTATATATA-G hg38:Y:19767714-GTATATATA-G | 12×TA | ** | |||||
| hg19:Y:21934591-C-A hg38:Y:19772705-C-A | ** | ||||||
| hg19:Y:22008245-A-C hg38:Y:19846359-A-C | ** | ||||||
| hg19:Y:22164280-C-A hg38:Y:20002394-C-A | ** | ||||||
| hg19:Y:22341975-C-G hg38:Y:20180089-C-G | DYZ19 | ** | |||||
| hg19:Y:22341991-G-C hg38:Y:20180105-G-C | DYZ19 | ** | |||||
| hg19:Y:22542454-C-A hg38:Y:20380568-C-A | ** | ||||||
| hg19:Y:22690849-G-A hg38:Y:20528963-G-A | ** | ||||||
| hg19:Y:22730436-C-A hg38:Y:20568550-C-A | ** | ||||||
| hg19:Y:23013956-C-A hg38:Y:20852070-C-A | ** | ||||||
| hg19:Y:23046072-A-T hg38:Y:20884186-A-T | FTA51261 | ** | |||||
| hg19:Y:23184359-C-T hg38:Y:21022473-C-T | ** | ||||||
| hg19:Y:23475612-C-A hg38:Y:21313726-C-A | ** | ||||||
| hg19:Y:23609242-G-T hg38:Y:21447356-G-T | ** | ||||||
| hg38:Y:21751720-T-C | ** | ||||||
| hg19:Y:24421021-C-T hg38:Y:22274874-C-T | ** | ||||||
| hg19:Y:24432716-T-G hg38:Y:22286569-T-G | ** | ||||||
| hg19:Y:24490567-G-T hg38:Y:22344420-G-T | ** | ||||||
| hg19:Y:24868427-C-T hg38:Y:22722280-C-T | IR1_R | ** | |||||
| hg19:Y:24886230-C-A hg38:Y:22740083-C-A | g1 | ** | |||||
| hg19:Y:26249747-G-T hg38:Y:24103600-G-T | P1_Y1 | ** | |||||
| hg19:Y:26335009-C-A hg38:Y:24188862-C-A | P1_Y1 | ** | |||||
| hg19:Y:28080509-C-A hg38:Y:25934362-C-A | P1_Y2 | ** | |||||
| hg19:Y:28111648-C-A hg38:Y:25965501-C-A | P1_Y2 | ** | |||||
| hg19:Y:28468205-A-C hg38:Y:26322058-A-C | ** | ||||||
| hg19:Y:28500943-T-G hg38:Y:26354796-T-G | ** | ||||||
| hg19:Y:28543923-G-T hg38:Y:26397776-G-T | ** | ||||||
| hg19:Y:28574482-C-A hg38:Y:26428335-C-A | ** | ||||||
| hg19:Y:28605374-T-C hg38:Y:26459227-T-C | ** | ||||||
| hg19:Y:28616408-G-A hg38:Y:26470261-G-A | ** | ||||||
| hg19:Y:28666102-C-A hg38:Y:26519955-C-A | ** | ||||||
| hg19:Y:28751945-C-T hg38:Y:26605798-C-T | ** | ||||||
| hg19:Y:28757949-A-T hg38:Y:26611802-A-T | ** | ||||||
| hg19:Y:28763834-A-C hg38:Y:26617687-A-C | ** | ||||||
| hg38:Y:56745055-T-A | ** | ||||||
| hg38:Y:56840233-G-T | ** | ||||||
| hg38:Y:56857999-G-A | ** | ||||||
| hg38:Y:56870751-C-A | ** | ||||||
| hg38:Y:56882645-A-C | ** | ||||||
| hg19:Y:23843638-G-C hg38:Y:21681752-G-C | S25893 | *** | |||||
| hg19:Y:23495773-TAA-T hg38:Y:21333887-TAA-T | *** | ||||||
| hg19:Y:58994945-T-C hg38:Y:56848798-T-C | *** | ||||||
| hg38:Y:10887984-TTCCAC-T | *** | ||||||
| hg38:Y:10755392-AT-A,CA | *** | ||||||
| hg19:Y:13447129-T-C hg38:Y:11291453-T-C | *** | ||||||
| hg19:Y:18605225-C-A hg38:Y:16493345-C-A | *** | ||||||
| hg19:Y:23142074-C-A hg38:Y:20980188-C-A | *** | ||||||
| hg19:Y:22974116-CAAA-C,CAA hg38:Y:20812230-CAAA-C,CAA | 24×A | *** | |||||
| hg38:Y:56842365-A-G | *** | ||||||
| hg38:Y:56842382-T-C | *** | ||||||
| hg38:Y:56842398-G-C | *** | ||||||
| hg38:Y:56842413-G-A | *** | ||||||
| hg19:Y:15770581-G-T hg38:Y:13658701-G-T | *** | ||||||
| hg38:Y:10948283-C-A | *** | ||||||
| hg19:Y:13962154-C-A hg38:Y:11841448-C-A | *** | ||||||
| hg19:Y:13488794-C-A,T hg38:Y:11333118-C-A,T | *** | ||||||
| hg38:Y:10896369-C-T | *** | ||||||
| hg38:Y:11022898-T-A,G | *** | ||||||
| hg38:Y:10976943-C-T | *** | ||||||
| hg38:Y:10669485-A-T | *** | ||||||
| hg19:Y:14517557-C-A hg38:Y:12405758-C-A | *** | ||||||
| hg19:Y:7098983-G-T hg38:Y:7230942-G-T | *** | ||||||
| hg19:Y:7253233-ATGAGT-A hg38:Y:7385192-ATGAGT-A | *** | ||||||
| hg19:Y:7271277-C-A hg38:Y:7403236-C-A | *** | ||||||
| hg19:Y:8217811-C-A hg38:Y:8349770-C-A | *** | ||||||
| hg19:Y:8333528-C-G hg38:Y:8465487-C-G | BY209297 | *** | |||||
| hg38:Y:10781579-A-T | *** | ||||||
| hg38:Y:10781585-T-C | *** | ||||||
| hg38:Y:10781586-T-C | *** | ||||||
| hg38:Y:10863772-C-A | *** | ||||||
| hg38:Y:10895803-TTCCGTTCCTC-T,TTCCATTCTAT | *** | ||||||
| hg38:Y:10921066-C-A | *** | ||||||
| hg19:Y:13332295-G-T hg38:Y:11176619-G-T | *** | ||||||
| hg19:Y:13513012-G-T hg38:Y:11357336-G-T | *** | ||||||
| hg19:Y:13620382-C-A hg38:Y:11464706-C-A | *** | ||||||
| hg38:Y:11645947-G-T | DYZ17 | *** | |||||
| hg19:Y:14825824-CTTTTTT-C,CTTTTT hg38:Y:12713891-CTTTTTT-C,CTTTTT | 18×T | *** | |||||
| hg19:Y:15268987-AAT-A hg38:Y:13157076-AAT-A | *** | ||||||
| hg19:Y:16703717-T-A hg38:Y:14591837-T-A | *** | ||||||
| hg19:Y:17004731-C-A hg38:Y:14892851-C-A | *** | ||||||
| hg19:Y:17158731-C-A hg38:Y:15046851-C-A | *** | ||||||
| hg19:Y:17475311-C-A hg38:Y:15363431-C-A | *** | ||||||
| hg19:Y:19415733-C-T hg38:Y:17303853-C-T | *** | ||||||
| hg19:Y:19531289-C-A hg38:Y:17419409-C-A | *** | ||||||
| hg19:Y:23824929-C-A hg38:Y:21663043-C-A | *** | ||||||
| hg19:Y:27995163-C-T hg38:Y:25849016-C-T | BY39857 | P1_Y2 | *** | ||||
| hg38:Y:56848807-T-A | *** | ||||||
| hg38:Y:56848808-A-G | *** | ||||||
| hg38:Y:56848817-T-C | *** | ||||||
| hg38:Y:56848823-T-G | *** | ||||||
| hg38:Y:56848832-AG-A | *** | ||||||
| hg38:Y:56850767-C-A | *** | ||||||
| hg38:Y:56858066-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: B61878 | 9731003 | 7960350 | 7835968 |
| Used in age calculations | 9731003 | 7960350 | 7835968 |
| Counts of SNPs | 0 | 1 |
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