McGinnis
BigY3: 760443, BigY2: 760443MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 760443 | BigY2 760443 |
---|---|---|---|---|---|---|---|---|
hg19:Y:19705378-C-T hg38:Y:17593498-C-T | P5_Prx | A* | A* | |||||
hg19:Y:19929730-T-TA hg38:Y:17817850-T-TA | P5_Prx | 9×A | A* | |||||
hg19:Y:19613139-C-G hg38:Y:17501259-C-G | P5_Prx | Y | A* | A* | ||||
hg19:Y:24256747-A-G hg38:Y:22110600-A-G | P3_b1 | A* | ||||||
hg19:Y:9384307-C-A hg38:Y:9546698-C-A | Y44770 | FGC40445 | Y | + | + | |||
hg19:Y:7838085-G-T hg38:Y:7970044-G-T | BY68095 | Y | Y | + | + | |||
hg19:Y:8337647-G-A hg38:Y:8469606-G-A | BY71795 | Y | Y | + | + | |||
hg19:Y:9757119-G-A hg38:Y:9919510-G-A | BY80812 | + | + | |||||
hg19:Y:14263423-T-C hg38:Y:12142717-T-C | FT133859 | Y | Y | + | ** | |||
hg19:Y:22459137-A-T hg38:Y:20297251-A-T | BY220250 | DYZ19 | + | + | ||||
hg19:Y:22796412-A-G hg38:Y:20634526-A-G | BY140833 | Y | Y | + | + | |||
hg19:Y:23055945-G-A hg38:Y:20894059-G-A | BY142604 | Y | Y | + | + | |||
hg19:Y:24508242-C-T hg38:Y:22362095-C-T | BY150441 | ** | + | |||||
hg19:Y:24513659-G-A hg38:Y:22367512-G-A | FT135058 | + | ** | |||||
hg19:Y:28795054-T-A hg38:Y:26648907-T-A | BY151483 | + | + | |||||
hg38:Y:10780429-G-A | + | |||||||
hg19:Y:4984414-A-C hg38:Y:5116373-A-C | FT132900 | + | ||||||
hg19:Y:9922567-T-C hg38:Y:10084958-T-C | FT361674 | Y | + | |||||
hg19:Y:24407980-A-G hg38:Y:22261833-A-G | FT135043 | + | ||||||
hg19:Y:8333602-T-C hg38:Y:8465561-T-C | ** | |||||||
hg19:Y:8333608-T-C hg38:Y:8465567-T-C | ** | |||||||
hg19:Y:18288761-C-A hg38:Y:16176881-C-A | BY43509 | P6_Prx | ** | |||||
hg19:Y:16575110-AT-A hg38:Y:14463230-AT-A | ** | |||||||
hg19:Y:8379505-A-C hg38:Y:8511464-A-C | Z12344 | ** | ||||||
hg19:Y:16394399-C-T hg38:Y:14282519-C-T | Y2541 FGC2669 AM00892 | ** | ||||||
hg19:Y:19609552-G-GA hg38:Y:17497672-G-GA | P5_Prx | 9×A | ** | |||||
hg19:Y:18970320-CA-C hg38:Y:16858440-CA-C | 28×A | ** | ||||||
hg19:Y:22298438-A-G hg38:Y:20136552-A-G | BY30315 | DYZ19 | ** | |||||
hg38:Y:10754858-T-G | ** | |||||||
hg19:Y:4460579-A-AT hg38:Y:4592538-A-AT | 10×T | ** | ||||||
hg38:Y:10945223-G-T | ** | |||||||
hg38:Y:10789147-C-A | ** | |||||||
hg38:Y:10893191-G-T | ** | |||||||
hg38:Y:56844869-G-T | ** | |||||||
hg19:Y:16029244-G-T hg38:Y:13917364-G-T | ** | |||||||
hg38:Y:11027640-T-C | ** | |||||||
hg38:Y:11027714-A-G | ** | |||||||
hg38:Y:11027720-T-A | ** | |||||||
hg19:Y:5612762-C-A hg38:Y:5744721-C-A | ** | |||||||
hg19:Y:15730497-C-A hg38:Y:13618617-C-A | ** | |||||||
hg38:Y:11005556-C-G | ** | |||||||
hg19:Y:15515178-CTTT-C hg38:Y:13403298-CTTT-C | 14×T | ** | ||||||
hg19:Y:19043004-C-A hg38:Y:16931124-C-A | ** | |||||||
hg19:Y:6637196-C-A hg38:Y:6769155-C-A | ** | |||||||
hg38:Y:10752506-T-C | ** | |||||||
hg38:Y:11014832-TCATTC-T | ** | |||||||
hg38:Y:10667759-A-G | ** | |||||||
hg19:Y:19218118-T-G hg38:Y:17106238-T-G | ** | |||||||
hg19:Y:16877004-C-A hg38:Y:14765124-C-A | ** | |||||||
hg38:Y:10752496-C-T | ** | |||||||
hg38:Y:10898353-C-G | ** | |||||||
hg38:Y:10898368-C-A | ** | |||||||
hg19:Y:15290074-C-A hg38:Y:13178173-C-A | ** | |||||||
hg38:Y:10994095-C-G | ** | |||||||
hg19:Y:15410483-A-C hg38:Y:13298603-A-C | ** | |||||||
hg19:Y:24884155-G-T hg38:Y:22738008-G-T | g1 | ** | ||||||
hg38:Y:10979146-C-A | ** | |||||||
hg19:Y:14483323-G-T hg38:Y:12362592-G-T | ** | |||||||
hg19:Y:4240806-C-A hg38:Y:4372765-C-A | ** | |||||||
hg19:Y:14514172-C-A hg38:Y:12402377-C-A | ** | |||||||
hg19:Y:16017671-C-A hg38:Y:13905791-C-A | ** | |||||||
hg38:Y:10973726-G-T | ** | |||||||
hg19:Y:8776578-G-T hg38:Y:8908537-G-T | ** | |||||||
hg19:Y:13712631-G-A hg38:Y:11556955-G-A | DYZ17 | ** | ||||||
hg38:Y:10797666-G-C | ** | |||||||
hg38:Y:10994077-T-A | ** | |||||||
hg38:Y:10773067-C-A | ** | |||||||
hg19:Y:27861910-C-A hg38:Y:25715763-C-A | P1_Y2 | ** | ||||||
hg38:Y:10803076-T-C | ** | |||||||
hg19:Y:3492685-C-A hg38:Y:3624644-C-A | ** | |||||||
hg38:Y:10764590-C-T | ** | |||||||
hg38:Y:11032203-A-T | ** | |||||||
hg19:Y:5221115-C-A hg38:Y:5353074-C-A | ** | |||||||
hg38:Y:10845651-C-GGCTTG | ** | |||||||
hg38:Y:10934919-CTTCCA-C | ** | |||||||
hg19:Y:13237519-C-A hg38:Y:11081843-C-A | ** | |||||||
hg19:Y:28545696-CAAAA-C hg38:Y:26399549-CAAAA-C | 26×A | ** | ||||||
hg38:Y:10667828-G-C | ** | |||||||
hg19:Y:13995901-C-A hg38:Y:11875195-C-A | ** | |||||||
hg19:Y:6582413-T-A hg38:Y:6714372-T-A | ** | |||||||
hg38:Y:11018604-G-T | ** | |||||||
hg19:Y:9918891-G-T hg38:Y:10081282-G-T | ** | |||||||
hg19:Y:16583340-G-A hg38:Y:14471460-G-A | Y70161 | ** | ||||||
hg19:Y:20250037-T-TA hg38:Y:18088151-T-TA | P5_Dst | ** | ||||||
hg19:Y:5923714-T-C hg38:Y:6055673-T-C | ** | |||||||
hg19:Y:20951211-T-G hg38:Y:18789325-T-G | P4_Dst | ** | ||||||
hg19:Y:20951212-TTGA-T hg38:Y:18789326-TTGA-T | P4_Dst | ** | ||||||
hg19:Y:20755551-C-A hg38:Y:18593665-C-A | P4_Prx | ** | ||||||
hg19:Y:13712593-G-T hg38:Y:11556917-G-T | DYZ17 | ** | ||||||
hg19:Y:13712597-T-A hg38:Y:11556921-T-A | DYZ17 | ** | ||||||
hg19:Y:20920804-C-A hg38:Y:18758918-C-A | P4_Dst | ** | ||||||
hg19:Y:14517759-C-A hg38:Y:12405960-C-A | ** | |||||||
hg19:Y:13329536-G-T hg38:Y:11173860-G-T | ** | |||||||
hg19:Y:7099848-C-A hg38:Y:7231807-C-A | ** | |||||||
hg38:Y:11027689-TC-G | ** | |||||||
hg19:Y:16602739-C-A hg38:Y:14490859-C-A | ** | |||||||
hg19:Y:15109639-G-T hg38:Y:12997726-G-T | ** | |||||||
hg19:Y:21488645-C-A hg38:Y:19326759-C-A | ** | |||||||
hg19:Y:19007653-C-A hg38:Y:16895773-C-A | ** | |||||||
hg19:Y:14245090-C-A hg38:Y:12124384-C-A | ** | |||||||
hg19:Y:14134925-CT-C hg38:Y:12014219-CT-C | 10×T | ** | ||||||
hg19:Y:13461084-T-A hg38:Y:11305408-T-A | ** | |||||||
hg19:Y:18793639-G-T hg38:Y:16681759-G-T | ** | |||||||
hg19:Y:22171482-G-T hg38:Y:20009596-G-T | ** | |||||||
hg19:Y:9079478-G-T hg38:Y:9241869-G-T | ** | |||||||
hg38:Y:10845695-C-T | ** | |||||||
hg19:Y:2769388-C-T hg38:Y:2901347-C-T | ** | |||||||
hg19:Y:2791510-A-T hg38:Y:2923469-A-T | ** | |||||||
hg19:Y:2791519-A-T hg38:Y:2923478-A-T | ** | |||||||
hg19:Y:2817120-C-A hg38:Y:2949079-C-A | ** | |||||||
hg19:Y:2999498-C-A hg38:Y:3131457-C-A | ** | |||||||
hg19:Y:3014391-C-A hg38:Y:3146350-C-A | ** | |||||||
hg19:Y:3018687-T-G hg38:Y:3150646-T-G | ** | |||||||
hg19:Y:3077868-G-T hg38:Y:3209827-G-T | ** | |||||||
hg19:Y:3099587-G-T hg38:Y:3231546-G-T | ** | |||||||
hg19:Y:3131322-T-C hg38:Y:3263281-T-C | FT272659 | ** | ||||||
hg19:Y:3157293-C-A hg38:Y:3289252-C-A | ** | |||||||
hg19:Y:3203003-C-A hg38:Y:3334962-C-A | ** | |||||||
hg19:Y:3251815-AT-A hg38:Y:3383774-AT-A | ** | |||||||
hg19:Y:3330958-C-A hg38:Y:3462917-C-A | ** | |||||||
hg19:Y:3346279-A-T hg38:Y:3478238-A-T | ** | |||||||
hg19:Y:3346285-A-T hg38:Y:3478244-A-T | ** | |||||||
hg19:Y:3429933-T-G hg38:Y:3561892-T-G | ** | |||||||
hg19:Y:3475364-C-T hg38:Y:3607323-C-T | ** | |||||||
hg19:Y:3657464-A-C hg38:Y:3789423-A-C | ** | |||||||
hg19:Y:3659889-C-A hg38:Y:3791848-C-A | ** | |||||||
hg19:Y:3660377-C-A hg38:Y:3792336-C-A | ** | |||||||
hg19:Y:3758822-C-A hg38:Y:3890781-C-A | ** | |||||||
hg19:Y:3841770-G-T hg38:Y:3973729-G-T | ** | |||||||
hg19:Y:3859820-C-A hg38:Y:3991779-C-A | ** | |||||||
hg19:Y:4080864-C-G hg38:Y:4212823-C-G | ** | |||||||
hg19:Y:4112301-G-T hg38:Y:4244260-G-T | ** | |||||||
hg19:Y:4140902-C-A hg38:Y:4272861-C-A | ** | |||||||
hg19:Y:4201533-C-A hg38:Y:4333492-C-A | ** | |||||||
hg19:Y:4235641-C-A hg38:Y:4367600-C-A | ** | |||||||
hg19:Y:4302856-C-A hg38:Y:4434815-C-A | ** | |||||||
hg19:Y:4317920-C-A hg38:Y:4449879-C-A | ** | |||||||
hg19:Y:4469099-G-T hg38:Y:4601058-G-T | ** | |||||||
hg19:Y:4478426-C-A hg38:Y:4610385-C-A | ** | |||||||
hg19:Y:4519005-C-A hg38:Y:4650964-C-A | ** | |||||||
hg19:Y:4519105-T-A hg38:Y:4651064-T-A | ** | |||||||
hg19:Y:4531885-C-A hg38:Y:4663844-C-A | ** | |||||||
hg19:Y:4589561-C-A hg38:Y:4721520-C-A | ** | |||||||
hg19:Y:4644946-G-T hg38:Y:4776905-G-T | ** | |||||||
hg19:Y:4679296-C-A hg38:Y:4811255-C-A | ** | |||||||
hg19:Y:5061935-C-A hg38:Y:5193894-C-A | ** | |||||||
hg19:Y:5108136-C-A hg38:Y:5240095-C-A | ** | |||||||
hg19:Y:5178644-C-A hg38:Y:5310603-C-A | ** | |||||||
hg19:Y:5257575-T-C hg38:Y:5389534-T-C | ** | |||||||
hg19:Y:5459320-C-A hg38:Y:5591279-C-A | ** | |||||||
hg19:Y:5627784-A-G hg38:Y:5759743-A-G | ** | |||||||
hg19:Y:5628769-C-A hg38:Y:5760728-C-A | FT324561 | ** | ||||||
hg19:Y:5644645-C-A hg38:Y:5776604-C-A | ** | |||||||
hg19:Y:5671468-G-T hg38:Y:5803427-G-T | ** | |||||||
hg19:Y:5671576-AT-A hg38:Y:5803535-AT-A | ** | |||||||
hg19:Y:6086285-G-T hg38:Y:6218244-G-T | ** | |||||||
hg19:Y:6403580-G-C hg38:Y:6535539-G-C | ** | |||||||
hg19:Y:6477720-C-A hg38:Y:6609679-C-A | ** | |||||||
hg19:Y:6535491-C-A hg38:Y:6667450-C-A | ** | |||||||
hg19:Y:6652587-C-A hg38:Y:6784546-C-A | ** | |||||||
hg19:Y:6682102-T-G hg38:Y:6814061-T-G | ** | |||||||
hg19:Y:6748110-C-A hg38:Y:6880069-C-A | ** | |||||||
hg19:Y:6795238-G-C hg38:Y:6927197-G-C | ** | |||||||
hg19:Y:6916346-G-C hg38:Y:7048305-G-C | ** | |||||||
hg19:Y:6926212-C-A hg38:Y:7058171-C-A | ** | |||||||
hg19:Y:7031093-C-A hg38:Y:7163052-C-A | ** | |||||||
hg19:Y:7039847-G-T hg38:Y:7171806-G-T | ** | |||||||
hg19:Y:7042115-G-T hg38:Y:7174074-G-T | ** | |||||||
hg19:Y:7043396-G-T hg38:Y:7175355-G-T | ** | |||||||
hg19:Y:7081502-G-T hg38:Y:7213461-G-T | ** | |||||||
hg19:Y:7099223-C-A hg38:Y:7231182-C-A | ** | |||||||
hg19:Y:7123543-C-A hg38:Y:7255502-C-A | ** | |||||||
hg19:Y:7134056-C-A hg38:Y:7266015-C-A | ** | |||||||
hg19:Y:7138437-A-C hg38:Y:7270396-A-C | ** | |||||||
hg19:Y:7143417-C-A hg38:Y:7275376-C-A | ** | |||||||
hg19:Y:7221363-C-G hg38:Y:7353322-C-G | ** | |||||||
hg19:Y:7233076-T-G hg38:Y:7365035-T-G | ** | |||||||
hg19:Y:7285179-G-T hg38:Y:7417138-G-T | ** | |||||||
hg19:Y:7646516-G-T hg38:Y:7778475-G-T | ** | |||||||
hg19:Y:7699267-C-A hg38:Y:7831226-C-A | ** | |||||||
hg19:Y:7699276-C-G hg38:Y:7831235-C-G | ** | |||||||
hg19:Y:7704820-G-A hg38:Y:7836779-G-A | ** | |||||||
hg19:Y:7710296-T-G hg38:Y:7842255-T-G | ** | |||||||
hg19:Y:7897159-G-T hg38:Y:8029118-G-T | ** | |||||||
hg19:Y:7990714-G-A hg38:Y:8122673-G-A | ** | |||||||
hg19:Y:8001980-T-TA hg38:Y:8133939-T-TA | 9×A | ** | ||||||
hg19:Y:8333596-T-C hg38:Y:8465555-T-C | ** | |||||||
hg38:Y:9108565-A-C | ** | |||||||
hg19:Y:9993369-C-A hg38:Y:10155760-C-A | ** | |||||||
hg19:Y:10040125-C-A hg38:Y:10202516-C-A | ** | |||||||
hg38:Y:10667782-G-T | ** | |||||||
hg38:Y:10667810-A-T | ** | |||||||
hg38:Y:10684688-T-A | ** | |||||||
hg38:Y:10684701-C-G | ** | |||||||
hg38:Y:10684704-T-C | ** | |||||||
hg38:Y:10684719-C-G | ** | |||||||
hg38:Y:10684729-T-A | ** | |||||||
hg38:Y:10684737-A-C | ** | |||||||
hg38:Y:10684739-A-T | ** | |||||||
hg38:Y:10684743-A-C | ** | |||||||
hg38:Y:10684744-T-C | ** | |||||||
hg38:Y:10684756-T-C | ** | |||||||
hg38:Y:10688064-C-G | ** | |||||||
hg38:Y:10752467-T-C | ** | |||||||
hg38:Y:10752483-C-G | ** | |||||||
hg38:Y:10755516-C-A | ** | |||||||
hg38:Y:10763172-A-T | ** | |||||||
hg38:Y:10764599-C-CCCCTT | ** | |||||||
hg38:Y:10764930-G-T | ** | |||||||
hg38:Y:10767254-G-T | ** | |||||||
hg38:Y:10768569-G-C | ** | |||||||
hg38:Y:10768590-G-A | ** | |||||||
hg38:Y:10768600-C-T | ** | |||||||
hg38:Y:10769377-T-G | ** | |||||||
hg38:Y:10771081-C-A | ** | |||||||
hg38:Y:10774575-T-A | ** | |||||||
hg38:Y:10781751-C-A | ** | |||||||
hg38:Y:10784153-G-T | ** | |||||||
hg38:Y:10785164-A-G | ** | |||||||
hg38:Y:10787551-C-A | ** | |||||||
hg38:Y:10791042-TC-T | ** | |||||||
hg38:Y:10796496-C-A | ** | |||||||
hg38:Y:10800733-TC-T | ** | |||||||
hg38:Y:10802615-C-A | ** | |||||||
hg38:Y:10803017-A-G | ** | |||||||
hg38:Y:10803048-C-A | ** | |||||||
hg38:Y:10803073-C-G | ** | |||||||
hg38:Y:10803610-C-A | ** | |||||||
hg38:Y:10811722-A-G | ** | |||||||
hg38:Y:10817343-C-A | ** | |||||||
hg38:Y:10822995-C-A | ** | |||||||
hg38:Y:10835276-A-T | ** | |||||||
hg38:Y:10836479-C-T | ** | |||||||
hg38:Y:10845684-T-C | ** | |||||||
hg38:Y:10845687-A-AAACCT | ** | |||||||
hg38:Y:10850734-C-A | ** | |||||||
hg38:Y:10851009-C-G | ** | |||||||
hg38:Y:10857266-C-A | ** | |||||||
hg38:Y:10857603-C-A | ** | |||||||
hg38:Y:10861985-C-A | ** | |||||||
hg38:Y:10864779-A-T | ** | |||||||
hg38:Y:10864784-A-G | ** | |||||||
hg38:Y:10883047-C-A | ** | |||||||
hg38:Y:10885665-C-T | ** | |||||||
hg38:Y:10893772-CATT-C | ** | |||||||
hg38:Y:10896096-C-A | ** | |||||||
hg38:Y:10898354-A-G | ** | |||||||
hg38:Y:10898372-C-T | ** | |||||||
hg38:Y:10900801-T-A | ** | |||||||
hg38:Y:10900831-C-T | ** | |||||||
hg38:Y:10911325-C-A | ** | |||||||
hg38:Y:10925177-C-A | FT436740 | ** | ||||||
hg38:Y:10931713-C-A | ** | |||||||
hg38:Y:10932839-C-G | ** | |||||||
hg38:Y:10932851-G-T | ** | |||||||
hg38:Y:10932863-A-T | ** | |||||||
hg38:Y:10935953-C-A | ** | |||||||
hg38:Y:10936014-C-A | ** | |||||||
hg38:Y:10937595-T-C | ** | |||||||
hg38:Y:10945167-A-T | ** | |||||||
hg38:Y:10946273-C-G | ** | |||||||
hg38:Y:10946290-A-T | ** | |||||||
hg38:Y:10947263-C-A | ** | |||||||
hg38:Y:10951719-C-A | ** | |||||||
hg38:Y:10960368-A-T | ** | |||||||
hg38:Y:10961338-C-A | ** | |||||||
hg38:Y:10964719-C-A | ** | |||||||
hg38:Y:10973938-C-G | ** | |||||||
hg38:Y:10973977-CA-C | ** | |||||||
hg38:Y:10973991-C-G | ** | |||||||
hg38:Y:10979591-T-A | ** | |||||||
hg38:Y:10984368-G-T | ** | |||||||
hg38:Y:10987112-C-T | ** | |||||||
hg38:Y:10994670-A-G | ** | |||||||
hg38:Y:10997692-A-C | ** | |||||||
hg38:Y:10997697-A-ATT | ** | |||||||
hg38:Y:11004424-C-T | ** | |||||||
hg38:Y:11004462-T-G | ** | |||||||
hg38:Y:11005506-T-C | ** | |||||||
hg38:Y:11009993-A-C | ** | |||||||
hg38:Y:11026854-C-A | ** | |||||||
hg38:Y:11027670-C-A | FT440097 | ** | ||||||
hg38:Y:11034817-T-C | ** | |||||||
hg38:Y:11034842-T-C | ** | |||||||
hg38:Y:11034848-C-G | ** | |||||||
hg38:Y:11034905-T-C | ** | |||||||
hg38:Y:11034915-C-A | ** | |||||||
hg38:Y:11034929-A-G | ** | |||||||
hg38:Y:11034937-T-G | ** | |||||||
hg19:Y:13453665-T-C hg38:Y:11297989-T-C | ** | |||||||
hg19:Y:13453691-T-A hg38:Y:11298015-T-A | ** | |||||||
hg19:Y:13493298-C-A hg38:Y:11337622-C-A | ** | |||||||
hg19:Y:13503965-C-A hg38:Y:11348289-C-A | ** | |||||||
hg19:Y:13529865-C-T hg38:Y:11374189-C-T | ** | |||||||
hg19:Y:13712602-T-A hg38:Y:11556926-T-A | DYZ17 | ** | ||||||
hg19:Y:13719455-G-C hg38:Y:11563779-G-C | DYZ17 | ** | ||||||
hg38:Y:11657769-A-T | DYZ17 | ** | ||||||
hg38:Y:11664021-C-A | DYZ17 | ** | ||||||
hg19:Y:13856305-A-T hg38:Y:11735599-A-T | A18135 | DYZ17 | ** | |||||
hg19:Y:13856330-A-C hg38:Y:11735624-A-C | DYZ17 | ** | ||||||
hg19:Y:13858699-G-T hg38:Y:11737993-G-T | DYZ17 | ** | ||||||
hg19:Y:13862438-A-T hg38:Y:11741732-A-T | DYZ17 | ** | ||||||
hg19:Y:13902297-C-A hg38:Y:11781591-C-A | ** | |||||||
hg19:Y:13902779-C-A hg38:Y:11782073-C-A | ** | |||||||
hg19:Y:13929994-A-C hg38:Y:11809288-A-C | ** | |||||||
hg19:Y:14027265-C-A hg38:Y:11906559-C-A | ** | |||||||
hg19:Y:14036187-C-A hg38:Y:11915481-C-A | ** | |||||||
hg19:Y:14226648-A-C hg38:Y:12105942-A-C | ** | |||||||
hg19:Y:14240490-G-A hg38:Y:12119784-G-A | FT121751 | ** | ||||||
hg19:Y:14366414-C-A hg38:Y:12245709-C-A | ** | |||||||
hg19:Y:14445222-G-T hg38:Y:12324495-G-T | ** | |||||||
hg19:Y:14447378-C-A hg38:Y:12326651-C-A | ** | |||||||
hg19:Y:14474887-A-C hg38:Y:12354156-A-C | ** | |||||||
hg19:Y:14483468-C-T hg38:Y:12362737-C-T | ** | |||||||
hg19:Y:14546540-C-A hg38:Y:12434741-C-A | ** | |||||||
hg19:Y:14552404-C-A hg38:Y:12440605-C-A | ** | |||||||
hg19:Y:14552405-A-G hg38:Y:12440606-A-G | ** | |||||||
hg19:Y:14581004-C-A hg38:Y:12469204-C-A | ** | |||||||
hg19:Y:14606467-C-T hg38:Y:12494669-C-T | ** | |||||||
hg19:Y:14846859-C-A hg38:Y:12734925-C-A | ** | |||||||
hg19:Y:14859067-C-A hg38:Y:12747133-C-A | ** | |||||||
hg19:Y:14912046-C-A hg38:Y:12800113-C-A | ** | |||||||
hg19:Y:15105123-C-A hg38:Y:12993211-C-A | ** | |||||||
hg19:Y:15209198-T-A hg38:Y:13097284-T-A | ** | |||||||
hg19:Y:15210863-G-C hg38:Y:13098949-G-C | ** | |||||||
hg19:Y:15210867-C-G hg38:Y:13098953-C-G | ** | |||||||
hg19:Y:15367030-A-G hg38:Y:13255150-A-G | ** | |||||||
hg19:Y:15424538-C-A hg38:Y:13312658-C-A | ** | |||||||
hg19:Y:15442310-C-A hg38:Y:13330430-C-A | ** | |||||||
hg19:Y:15732866-C-A hg38:Y:13620986-C-A | ** | |||||||
hg19:Y:15741727-G-T hg38:Y:13629847-G-T | ** | |||||||
hg19:Y:15773392-A-T hg38:Y:13661512-A-T | ** | |||||||
hg19:Y:15790517-A-G hg38:Y:13678637-A-G | ** | |||||||
hg19:Y:15799259-C-A hg38:Y:13687379-C-A | ** | |||||||
hg19:Y:16141811-C-A hg38:Y:14029931-C-A | P8_Dst | ** | ||||||
hg19:Y:16245370-C-A hg38:Y:14133490-C-A | ** | |||||||
hg19:Y:16316923-C-A hg38:Y:14205043-C-A | ** | |||||||
hg19:Y:16437450-G-T hg38:Y:14325570-G-T | ** | |||||||
hg19:Y:16464965-G-T hg38:Y:14353085-G-T | ** | |||||||
hg19:Y:16505135-G-T hg38:Y:14393255-G-T | ** | |||||||
hg19:Y:16533778-T-G hg38:Y:14421898-T-G | ** | |||||||
hg19:Y:16667964-C-A hg38:Y:14556084-C-A | ** | |||||||
hg19:Y:17363204-T-A hg38:Y:15251324-T-A | ** | |||||||
hg19:Y:17363216-T-G hg38:Y:15251336-T-G | ** | |||||||
hg19:Y:17369339-C-A hg38:Y:15257459-C-A | ** | |||||||
hg19:Y:17572017-T-A hg38:Y:15460137-T-A | ** | |||||||
hg19:Y:17639426-G-T hg38:Y:15527546-G-T | ** | |||||||
hg19:Y:17859814-C-A hg38:Y:15747934-C-A | ** | |||||||
hg19:Y:18192481-C-A hg38:Y:16080601-C-A | ** | |||||||
hg19:Y:18398184-CACACACACATATATATATATATATATATATATATATAT-C hg38:Y:16286304-CACACACACATATATATATATATATATATATATATATAT-C | P6_Gap | ** | ||||||
hg19:Y:18504197-G-T hg38:Y:16392317-G-T | P6_Dst | ** | ||||||
hg19:Y:18869075-T-C hg38:Y:16757195-T-C | ** | |||||||
hg19:Y:19009341-A-T hg38:Y:16897461-A-T | ** | |||||||
hg19:Y:19013551-G-T hg38:Y:16901671-G-T | ** | |||||||
hg19:Y:19121819-C-G hg38:Y:17009939-C-G | ** | |||||||
hg19:Y:19155927-G-T hg38:Y:17044047-G-T | ** | |||||||
hg19:Y:19168679-C-A hg38:Y:17056799-C-A | ** | |||||||
hg19:Y:19298330-C-A hg38:Y:17186450-C-A | ** | |||||||
hg19:Y:19370258-A-G hg38:Y:17258378-A-G | ** | |||||||
hg19:Y:19517206-C-A hg38:Y:17405326-C-A | ** | |||||||
hg19:Y:19642876-G-T hg38:Y:17530996-G-T | P5_Prx | ** | ||||||
hg19:Y:19931640-G-A hg38:Y:17819760-G-A | P5_Prx | ** | ||||||
hg19:Y:20424867-G-T hg38:Y:18262981-G-T | P5_Dst | ** | ||||||
hg19:Y:20692202-T-A hg38:Y:18530316-T-A | P4_Prx | ** | ||||||
hg19:Y:20692214-G-T hg38:Y:18530328-G-T | P4_Prx | ** | ||||||
hg19:Y:20692230-C-A hg38:Y:18530344-C-A | P4_Prx | ** | ||||||
hg19:Y:20865391-A-C hg38:Y:18703505-A-C | P4_Dst | ** | ||||||
hg19:Y:20989107-AC-A hg38:Y:18827221-AC-A | P4_Dst | ** | ||||||
hg19:Y:21281439-T-G hg38:Y:19119553-T-G | ** | |||||||
hg19:Y:21394544-G-A hg38:Y:19232658-G-A | FGC33581 | ** | ||||||
hg19:Y:21455663-G-T hg38:Y:19293777-G-T | ** | |||||||
hg19:Y:21585134-C-A hg38:Y:19423248-C-A | ** | |||||||
hg19:Y:21629492-G-A hg38:Y:19467606-G-A | ** | |||||||
hg19:Y:21851275-C-A hg38:Y:19689389-C-A | ** | |||||||
hg19:Y:22022843-C-A hg38:Y:19860957-C-A | ** | |||||||
hg19:Y:22063865-C-A hg38:Y:19901979-C-A | ** | |||||||
hg19:Y:22137113-G-C hg38:Y:19975227-G-C | ** | |||||||
hg19:Y:22155051-G-T hg38:Y:19993165-G-T | ** | |||||||
hg19:Y:22257941-C-T hg38:Y:20096055-C-T | DYZ19 | ** | *** | |||||
hg19:Y:22294963-G-T hg38:Y:20133077-G-T | DYZ19 | ** | ||||||
hg19:Y:22361122-T-G hg38:Y:20199236-T-G | DYZ19 | ** | ||||||
hg19:Y:22448048-G-T hg38:Y:20286162-G-T | DYZ19 | ** | ||||||
hg19:Y:22458095-C-T hg38:Y:20296209-C-T | DYZ19 | ** | ||||||
hg19:Y:22529887-G-A hg38:Y:20368001-G-A | FT64369 | ** | ||||||
hg19:Y:22833949-TCTTATATTCAAATATCTTTTTTA-T hg38:Y:20672063-TCTTATATTCAAATATCTTTTTTA-T | ** | |||||||
hg19:Y:22839102-G-A hg38:Y:20677216-G-A | ** | |||||||
hg19:Y:22885053-C-A hg38:Y:20723167-C-A | ** | |||||||
hg19:Y:22994702-C-A hg38:Y:20832816-C-A | ** | |||||||
hg19:Y:23013775-C-A hg38:Y:20851889-C-A | ** | |||||||
hg19:Y:23048217-A-G hg38:Y:20886331-A-G | ** | |||||||
hg19:Y:24446954-C-A hg38:Y:22300807-C-A | ** | |||||||
hg19:Y:24502360-C-A hg38:Y:22356213-C-A | ** | |||||||
hg19:Y:24512787-A-G hg38:Y:22366640-A-G | ** | |||||||
hg19:Y:24618869-T-TC hg38:Y:22472722-T-TC | P3_t2 | ** | ||||||
hg19:Y:25839716-G-T hg38:Y:23693569-G-T | P1_b3 | ** | ||||||
hg19:Y:25955534-A-C hg38:Y:23809387-A-C | P1_Y1 | ** | ||||||
hg19:Y:25970739-T-TCC hg38:Y:23824592-T-TCC | P1_Y1 | ** | ||||||
hg19:Y:26075547-G-C hg38:Y:23929400-G-C | P1_Y1 | ** | ||||||
hg19:Y:26341665-C-A hg38:Y:24195518-C-A | P1_Y1 | ** | ||||||
hg19:Y:26427362-A-C hg38:Y:24281215-A-C | P1_Y1 | ** | ||||||
hg19:Y:27585991-C-A hg38:Y:25439844-C-A | P1_Y2 | ** | ||||||
hg19:Y:28473005-G-T hg38:Y:26326858-G-T | ** | |||||||
hg19:Y:28499507-C-G hg38:Y:26353360-C-G | ** | |||||||
hg19:Y:28643841-T-A hg38:Y:26497694-T-A | ** | |||||||
hg19:Y:28660559-A-G hg38:Y:26514412-A-G | ** | |||||||
hg38:Y:56841794-G-T | ** | |||||||
hg19:Y:19950230-T-A hg38:Y:17838350-T-A | P5_Prx | ** | ||||||
hg19:Y:3663486-C-T hg38:Y:3795445-C-T | ** | |||||||
hg19:Y:7578015-T-C hg38:Y:7709974-T-C | ** | |||||||
hg19:Y:9766474-T-C hg38:Y:9928865-T-C | ** | |||||||
hg19:Y:13329621-G-A hg38:Y:11173945-G-A | ** | |||||||
hg19:Y:13347932-T-TACACACAC hg38:Y:11192256-T-TACACACAC | 21×AC | ** | ||||||
hg19:Y:19600637-C-A hg38:Y:17488757-C-A | P5_Prx | ** | ||||||
hg19:Y:19900870-T-TA hg38:Y:17788990-T-TA | P5_Prx | ** | ||||||
hg19:Y:20620919-AC-A hg38:Y:18459033-AC-A | P4_Prx | ** | ||||||
hg19:Y:23029538-T-C hg38:Y:20867652-T-C | ** | |||||||
hg19:Y:13862430-A-G hg38:Y:11741724-A-G | DYZ17 | *** | ||||||
hg19:Y:13862431-C-A hg38:Y:11741725-C-A | DYZ17 | *** | ||||||
hg19:Y:22478644-A-T hg38:Y:20316758-A-T | BY9459 | BY9459 | DYZ19 | *** | ||||
hg19:Y:6756908-C-CAA hg38:Y:6888867-C-CAA | 26×A | *** | ||||||
hg19:Y:8094607-G-A hg38:Y:8226566-G-A | FGC53148 | *** | ||||||
hg19:Y:13862425-G-A hg38:Y:11741719-G-A | FT276871 | DYZ17 | *** | |||||
hg19:Y:22011850-C-A hg38:Y:19849964-C-A | *** | |||||||
hg19:Y:7234334-C-A hg38:Y:7366293-C-A | *** | |||||||
hg38:Y:10967525-T-A | *** | |||||||
hg19:Y:19045010-TA-T,TAA hg38:Y:16933130-TA-T,TAA | 16×A | *** | ||||||
hg19:Y:14549309-CAAA-C,CA hg38:Y:12437510-CAAA-C,CA | 16×A | *** | ||||||
hg19:Y:6402445-G-T hg38:Y:6534404-G-T | *** | |||||||
hg38:Y:10673100-T-C | *** | |||||||
hg19:Y:19464135-G-T hg38:Y:17352255-G-T | *** | |||||||
hg19:Y:22816174-C-A hg38:Y:20654288-C-A | *** | |||||||
hg19:Y:6434921-TAAA-T,TA hg38:Y:6566880-TAAA-T,TA | 20×A | *** | ||||||
hg38:Y:10987016-C-A | *** | |||||||
hg19:Y:3077930-C-A hg38:Y:3209889-C-A | *** | |||||||
hg19:Y:3804570-C-A hg38:Y:3936529-C-A | *** | |||||||
hg19:Y:6147580-C-A hg38:Y:6279539-C-A | IR3_Dst | *** | ||||||
hg38:Y:9125337-G-GAAA | *** | |||||||
hg38:Y:10668313-C-A,T | *** | |||||||
hg38:Y:10752446-C-G | *** | |||||||
hg38:Y:10752461-A-C | *** | |||||||
hg38:Y:10752462-T-A | *** | |||||||
hg38:Y:10794259-CAATCCACTCT-C,CAATCCACACC | *** | |||||||
hg38:Y:10796228-GTTCCA-G | *** | |||||||
hg38:Y:10813607-C-A | *** | |||||||
hg38:Y:10825415-A-G | *** | |||||||
hg38:Y:10829062-C-A | *** | |||||||
hg38:Y:10859044-CCA-C | *** | |||||||
hg38:Y:10880041-T-C | *** | |||||||
hg38:Y:10964832-CACTCC-C,CACTCT | *** | |||||||
hg38:Y:11016482-C-A | *** | |||||||
hg19:Y:13466012-C-A,G hg38:Y:11310336-C-A,G | *** | |||||||
hg19:Y:13466013-A-G,T hg38:Y:11310337-A-G,T | *** | |||||||
hg38:Y:11652993-TGG-T | DYZ17 | *** | ||||||
hg19:Y:13862434-G-T hg38:Y:11741728-G-T | DYZ17 | *** | ||||||
hg19:Y:13862435-G-T hg38:Y:11741729-G-T | DYZ17 | *** | ||||||
hg19:Y:13862442-T-A hg38:Y:11741736-T-A | DYZ17 | *** | ||||||
hg19:Y:14425995-C-A hg38:Y:12305270-C-A | *** | |||||||
hg19:Y:15746423-C-A hg38:Y:13634543-C-A | *** | |||||||
hg19:Y:16617402-G-T hg38:Y:14505522-G-T | *** | |||||||
hg19:Y:19075472-A-G hg38:Y:16963592-A-G | *** | |||||||
hg19:Y:19302738-G-T hg38:Y:17190858-G-T | *** | |||||||
hg19:Y:21043037-G-A hg38:Y:18881151-G-A | *** | |||||||
hg38:Y:56851947-T-C | *** | |||||||
hg19:Y:22816176-A-T hg38:Y:20654290-A-T | *** | |||||||
hg19:Y:15235310-CTTT-C hg38:Y:13123396-CTTT-C | 13×T | *** | ||||||
hg19:Y:5088451-CTTT-C,CT hg38:Y:5220410-CTTT-C,CT | 27×T | *** | ||||||
hg19:Y:18135755-G-A hg38:Y:16023875-G-A | *** | |||||||
hg19:Y:22816171-T-C hg38:Y:20654285-T-C | *** | |||||||
hg19:Y:24417039-A-G hg38:Y:22270892-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 760443 | 9697083 | 7884107 | 7761209 |
Kit: 760443 | 15062895 | 9427703 | 8342338 |
Used in age calculations | 15062895 | 9427703 | 8342338 |
Counts of SNPs | 8 | 5 |
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