Buchanan
BigY2: 366281MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 366281 |
---|---|---|---|---|---|---|---|---|
14105485-A-G | 11984779-A-G | A19714 | Y | Y | + | |||
18021619-G-T | 15909739-G-T | A19715 | Y | + | ||||
58856019-A-T | 56734852-T-A | ** | ||||||
15132003-A-C | 13020090-A-C | ** | ||||||
14912888-C-A | 12800955-C-A | ** | ||||||
14943573-G-T | 12831647-G-T | ** | ||||||
15065962-A-T | 12954054-A-T | ** | ||||||
15070466-T-A | 12958557-T-A | ** | ||||||
15109651-G-T | 12997738-G-T | ** | ||||||
15198622-C-A | 13086708-C-A | ** | ||||||
15183078-T-C | 13071164-T-C | ** | ||||||
14727319-ATTTTT-A | 12615387-ATTTTT-A | 23×T | ** | |||||
15381154-T-G | 13269274-T-G | ** | ||||||
15399367-C-A | 13287487-C-A | ** | ||||||
15423680-G-T | 13311800-G-T | ** | ||||||
15495163-C-A | 13383283-C-A | ** | ||||||
14845498-C-A | 12733564-C-A | ** | ||||||
14608033-C-A | 12496235-C-A | ** | ||||||
14697000-C-A | 12585066-C-A | ** | ||||||
15497427-A-T | 13385547-A-T | ** | ||||||
14593739-T-A | 12481939-T-A | ** | ||||||
14592174-C-A | 12480374-C-A | ** | ||||||
14550660-C-A | 12438861-C-A | ** | ||||||
14539583-C-A | 12427784-C-A | ** | ||||||
14527183-C-A | 12415384-C-A | ** | ||||||
14475909-C-A | 12355178-C-A | ** | ||||||
14431489-A-G | 12310762-A-G | ** | ||||||
14366833-C-A | 12246128-C-A | ** | ||||||
14356313-T-A | 12235608-T-A | ** | ||||||
14356261-G-T | 12235556-G-T | ** | ||||||
14326553-A-C | 12205847-A-C | ** | ||||||
14300115-G-T | 12179409-G-T | ** | ||||||
15495205-A-G | 13383325-A-G | ** | ||||||
15701065-C-A | 13589185-C-A | ** | ||||||
15503207-A-G | 13391327-A-G | ** | ||||||
16551001-G-T | 14439121-G-T | ** | ||||||
17300699-A-G | 15188819-A-G | ** | ||||||
17300693-G-A | 15188813-G-A | ** | ||||||
17300686-G-T | 15188806-G-T | ** | ||||||
17226833-A-T | 15114953-A-T | ** | ||||||
17206574-C-A | 15094694-C-A | ** | ||||||
17193051-C-A | 15081171-C-A | ** | ||||||
17191661-A-T | 15079781-A-T | ** | ||||||
17056510-A-C | 14944630-A-C | ** | ||||||
17000406-C-A | 14888526-C-A | ** | ||||||
16941502-A-T | 14829622-A-T | ** | ||||||
16869605-C-A | 14757725-C-A | ** | ||||||
16789645-C-A | 14677765-C-A | ** | ||||||
16659046-T-A | 14547166-T-A | ** | ||||||
16553899-A-C | 14442019-A-C | ** | ||||||
16429633-G-T | 14317753-G-T | ** | ||||||
14273989-A-C | 12153283-A-C | ** | ||||||
16424953-G-T | 14313073-G-T | ** | ||||||
16383519-G-T | 14271639-G-T | ** | ||||||
16354252-T-A | 14242372-T-A | ** | ||||||
16270988-G-C | 14159108-G-C | ** | ||||||
16181284-T-A | 14069404-T-A | ** | ||||||
16119970-T-TCTTA | 14008090-T-TCTTA | P8_Prx | ** | |||||
16070101-T-A | 13958221-T-A | ** | ||||||
15971410-A-C | 13859530-A-C | ** | ||||||
15866236-T-G | 13754356-T-G | ** | ||||||
15866234-A-G | 13754354-A-G | ** | ||||||
15866233-T-G | 13754353-T-G | ** | ||||||
15864113-C-A | 13752233-C-A | ** | ||||||
15770386-G-A | 13658506-G-A | ** | ||||||
15729207-A-G | 13617327-A-G | ** | ||||||
14296801-A-T | 12176095-A-T | ** | ||||||
14195141-G-A | 12074435-G-A | ** | ||||||
17319824-T-G | 15207944-T-G | ** | ||||||
10905907-A-T | ** | |||||||
13218496-C-A | 11062820-C-A | ** | ||||||
11037905-C-A | ** | |||||||
11025497-T-A | ** | |||||||
11022127-AT-A | ** | |||||||
11020691-A-T | FT393917 | ** | ||||||
10959958-G-T | ** | |||||||
10956589-C-A | ** | |||||||
10953943-C-A | ** | |||||||
10949487-C-T | ** | |||||||
10926752-C-G | ** | |||||||
10905932-C-T | ** | |||||||
10905926-T-A | ** | |||||||
10905909-G-T | ** | |||||||
10894606-T-C | ** | |||||||
13223698-G-T | 11068022-G-T | ** | ||||||
10892090-C-A | ** | |||||||
10890080-C-A | FT435679 | ** | ||||||
10889289-AT-A | ** | |||||||
10889288-C-CT | ** | |||||||
10884022-C-A | ** | |||||||
10864839-G-T | ** | |||||||
10862838-A-T | ** | |||||||
10860507-C-T | ** | |||||||
10859534-T-A | ** | |||||||
10850842-A-T | ** | |||||||
10829681-C-A | ** | |||||||
10829679-C-G | ** | |||||||
10829648-A-T | ** | |||||||
10829646-C-T | ** | |||||||
13221854-A-C | 11066178-A-C | ** | ||||||
13231732-A-T | 11076056-A-T | ** | ||||||
14191332-A-C | 12070626-A-C | ** | ||||||
13718547-A-T | 11562871-A-T | ** | ||||||
14176135-C-A | 12055429-C-A | ** | ||||||
14147022-C-A | 12026316-C-A | ** | ||||||
14067079-C-A | 11946373-C-A | FTB51944 | ** | |||||
14032529-T-A | 11911823-T-A | ** | ||||||
13990161-T-G | 11869455-T-G | ** | ||||||
13988859-A-C | 11868153-A-C | ** | ||||||
13927897-C-A | 11807191-C-A | FT192825 | ** | |||||
13870763-C-A | 11750057-C-A | ** | ||||||
13865969-CGAATGGAATGGAATGGAATGGAATG-C | 11745263-CGAATGGAATGGAATGGAATGGAATG-C | 12×GAATG | ** | |||||
11653401-CGAATG-C | ** | |||||||
11651219-C-A | ** | |||||||
11645694-T-A | ** | |||||||
11643456-T-A | ** | |||||||
13726341-C-G | 11570665-C-G | ** | ||||||
13717530-G-T | 11561854-G-T | ** | ||||||
13266127-C-A | 11110451-C-A | ** | ||||||
13712357-T-A | 11556681-T-A | ** | ||||||
13712337-G-T | 11556661-G-T | ** | ||||||
13712326-T-A | 11556650-T-A | ** | ||||||
13698546-T-A | 11542870-T-A | ** | ||||||
13644217-T-G | 11488541-T-G | ** | ||||||
13642963-T-A | 11487287-T-A | ** | ||||||
13620720-G-T | 11465044-G-T | ** | ||||||
13585399-C-T | 11429723-C-T | ** | ||||||
13568765-C-A | 11413089-C-A | ** | ||||||
13543616-C-A | 11387940-C-A | ** | ||||||
13494012-C-A | 11338336-C-A | ** | ||||||
13485651-A-T | 11329975-A-T | ** | ||||||
13481970-C-A | 11326294-C-A | ** | ||||||
13325950-C-A | 11170274-C-A | ** | ||||||
17300724-G-A | 15188844-G-A | ** | ||||||
17338560-T-G | 15226680-T-G | ** | ||||||
10829641-C-T | ** | |||||||
22237589-TA-T | 20075703-TA-T | DYZ19 | ** | |||||
23512279-T-A | 21350393-T-A | ** | ||||||
23512241-A-T | 21350355-A-T | ** | ||||||
23427065-C-A | 21265179-C-A | ** | ||||||
23419249-T-A | 21257363-T-A | ** | ||||||
23316118-C-A | 21154232-C-A | Y128960 | ** | |||||
23306390-T-A | 21144504-T-A | ** | ||||||
23276559-C-A | 21114673-C-A | ** | ||||||
23188984-T-G | 21027098-T-G | ** | ||||||
23188233-G-T | 21026347-G-T | FT142663 | ** | |||||
23002855-ATATATATATATATATATATATATAT-A | 20840969-ATATATATATATATATATATATATAT-A | ** | ||||||
22809558-C-A | 20647672-C-A | ** | ||||||
22689887-CT-C | 20528001-CT-C | ** | ||||||
22518496-C-A | 20356610-C-A | ** | ||||||
22173592-T-A | 20011706-T-A | ** | ||||||
23837124-A-T | 21675238-A-T | ** | ||||||
22173588-T-A | 20011702-T-A | ** | ||||||
22102480-G-A | 19940594-G-A | ** | ||||||
22067680-C-A | 19905794-C-A | ** | ||||||
22011529-G-T | 19849643-G-T | ** | ||||||
21895561-C-A | 19733675-C-A | ** | ||||||
21738489-C-A | 19576603-C-A | ** | ||||||
21464631-G-T | 19302745-G-T | ** | ||||||
21456165-A-T | 19294279-A-T | ** | ||||||
21455833-A-T | 19293947-A-T | ** | ||||||
21408402-C-A | 19246516-C-A | ** | ||||||
21323294-T-G | 19161408-T-G | ** | ||||||
21318227-C-A | 19156341-C-A | ** | ||||||
21299246-C-A | 19137360-C-A | ** | ||||||
21266086-C-A | 19104200-C-A | ** | ||||||
23603240-G-T | 21441354-G-T | ** | ||||||
23997512-A-T | 21851365-A-T | ** | ||||||
21132686-T-C | 18970800-T-C | ** | ||||||
28441813-C-A | 26295666-C-A | P1_gr2 | ** | |||||
56839479-G-T | ** | |||||||
56839428-T-G | ** | |||||||
56832327-T-A | ** | |||||||
56728178-G-C | ** | |||||||
28782846-C-A | 26636699-C-A | ** | ||||||
28782333-C-A | 26636186-C-A | ** | ||||||
28775452-A-T | 26629305-A-T | ** | ||||||
28765425-T-A | 26619278-T-A | ** | ||||||
28756898-G-A | 26610751-G-A | Y81029 | ** | |||||
28743073-T-G | 26596926-T-G | ** | ||||||
28741095-C-A | 26594948-C-A | ** | ||||||
28580391-A-ATG | 26434244-A-ATG | 8×TG | ** | |||||
28545840-C-A | 26399693-C-A | ** | ||||||
28462155-C-A | 26316008-C-A | ** | ||||||
28428724-C-A | 26282577-C-A | P1_gr2 | ** | |||||
24177668-CCCCCTGATTCT-C | 22031521-CCCCCTGATTCT-C | P3_b1 | ** | |||||
27637105-G-T | 25490958-G-T | P1_Y2 | ** | |||||
27447499-TGA-T | 25301352-TGA-T | P1_Y2 | 10×GA | ** | ||||
26063988-A-AG | 23917841-A-AG | P1_Y1 | ** | |||||
25974416-C-A | 23828269-C-A | P1_Y1 | ** | |||||
25931506-A-G | 23785359-A-G | P1_Y1 | ** | |||||
24870825-C-A | 22724678-C-A | IR1_R | ** | |||||
24751231-G-C | 22605084-G-C | P3_b2 | ** | |||||
24673295-G-T | 22527148-G-T | P3_b2 | ** | |||||
24409362-GT-G | 22263215-GT-G | ** | ||||||
24401993-A-G | 22255846-A-G | ** | ||||||
24401992-C-T | 22255845-C-T | ** | ||||||
24401987-G-A | 22255840-G-A | ** | ||||||
24401986-T-C | 22255839-T-C | ** | ||||||
24283386-T-A | 22137239-T-A | P3_t1 | ** | |||||
21211901-C-A | 19050015-C-A | ** | ||||||
21105556-C-G | 18943670-C-G | ** | ||||||
17494547-C-A | 15382667-C-A | ** | ||||||
18368640-GT-G | 16256760-GT-G | P6_Prx | ** | |||||
19187419-TC-T | 17075539-TC-T | ** | ||||||
18966004-T-G | 16854124-T-G | ** | ||||||
18956209-A-C | 16844329-A-C | ** | ||||||
18901301-C-A | 16789421-C-A | ** | ||||||
18780542-C-T | 16668662-C-T | ** | ||||||
18778933-T-A | 16667053-T-A | ** | ||||||
18742376-G-T | 16630496-G-T | ** | ||||||
18693617-C-A | 16581737-C-A | ** | ||||||
18619034-A-C | 16507154-A-C | ** | ||||||
18604987-C-A | 16493107-C-A | ** | ||||||
18522379-G-T | 16410499-G-T | P6_Dst | ** | |||||
18520541-G-T | 16408661-G-T | P6_Dst | ** | |||||
18390199-G-T | 16278319-G-T | P6_Gap | ** | |||||
18354136-G-A | 16242256-G-A | P6_Prx | ** | |||||
19218106-T-G | 17106226-T-G | ** | ||||||
18317452-C-A | 16205572-C-A | P6_Prx | ** | |||||
18280186-C-A | 16168306-C-A | P6_Prx | ** | |||||
18271063-C-A | 16159183-C-A | ** | ||||||
18270192-C-A | 16158312-C-A | ** | ||||||
18204971-T-A | 16093091-T-A | ** | ||||||
18204968-G-C | 16093088-G-C | ** | ||||||
18154655-T-C | 16042775-T-C | ** | ||||||
18154296-C-A | 16042416-C-A | ** | ||||||
18119576-T-C | 16007696-T-C | ** | ||||||
17951157-A-C | 15839277-A-C | ** | ||||||
17885802-A-G | 15773922-A-G | ** | ||||||
17871913-T-G | 15760033-T-G | ** | ||||||
17672108-C-A | 15560228-C-A | ** | ||||||
17605470-C-A | 15493590-C-A | ** | ||||||
19198129-T-G | 17086249-T-G | ** | ||||||
19226084-G-A | 17114204-G-A | ** | ||||||
21105542-T-A | 18943656-T-A | ** | ||||||
19874216-T-TA | 17762336-T-TA | P5_Prx | ** | |||||
21037235-A-C | 18875349-A-C | ** | ||||||
20968574-C-G | 18806688-C-G | P4_Dst | ** | |||||
20968559-G-T | 18806673-G-T | P4_Dst | ** | |||||
20968557-C-A | 18806671-C-A | P4_Dst | ** | |||||
20968544-C-A | 18806658-C-A | P4_Dst | ** | |||||
20881861-T-TGGG | 18719975-T-TGGG | P4_Dst | ** | |||||
20755541-G-A | 18593655-G-A | P4_Prx | ** | |||||
20570230-T-G | 18408344-T-G | P5_Dst | ** | |||||
20345370-TTTTTTTCA-T | 18183484-TTTTTTTCA-T | P5_Dst | ** | |||||
20330301-G-T | 18168415-G-T | P5_Dst | ** | |||||
20040226-A-T | 17928346-A-T | P5_Prx | ** | |||||
20040223-A-T | 17928343-A-T | P5_Prx | ** | |||||
20040217-G-T | 17928337-G-T | P5_Prx | ** | |||||
20025496-CTTT-C | 17913616-CTTT-C | P5_Prx | ** | |||||
19829091-A-T | 17717211-A-T | P5_Prx | ** | |||||
19235627-C-A | 17123747-C-A | ** | ||||||
19622156-A-ACC | 17510276-A-ACC | P5_Prx | ** | |||||
19529411-C-A | 17417531-C-A | ** | ||||||
19523462-T-A | 17411582-T-A | ** | ||||||
19520867-G-T | 17408987-G-T | ** | ||||||
19460513-A-T | 17348633-A-T | ** | ||||||
19436805-A-T | 17324925-A-T | ** | ||||||
19422989-CCCT-C | 17311109-CCCT-C | 5×CCT | ** | |||||
19415528-C-A | 17303648-C-A | FTB868 | ** | |||||
19415009-C-A | 17303129-C-A | ** | ||||||
19385097-A-C | 17273217-A-C | ** | ||||||
19379469-T-G | 17267589-T-G | ** | ||||||
19377235-A-T | 17265355-A-T | ** | ||||||
19275236-T-G | 17163356-T-G | ** | ||||||
19272246-C-A | 17160366-C-A | ** | ||||||
10829642-A-T | ** | |||||||
10905953-C-A | ** | |||||||
10829638-C-A | ** | |||||||
17403837-A-T | 15291957-A-T | ** | ||||||
2738861-C-A | 2870820-C-A | ** | ||||||
2729787-C-A | 2861746-C-A | ** | ||||||
10672536-T-C | ** | |||||||
19668861-C-A | 17556981-C-A | P5_Prx | ** | |||||
14689188-C-A | 12577254-C-A | ** | ||||||
13454223-TTTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCA-T | 11298547-TTTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCA-T | 12×TTCCA | ** | |||||
10850889-C-A | ** | |||||||
18908114-A-C | 16796234-A-C | ** | ||||||
10691063-C-T | ** | |||||||
9181060-C-A | 9343451-C-A | ** | ||||||
14564003-C-A | 12452203-C-A | ** | ||||||
13460998-C-A | 11305322-C-A | ** | ||||||
27862656-G-T | 25716509-G-T | P1_Y2 | ** | |||||
2740452-A-T | 2872411-A-T | ** | ||||||
13908420-C-A | 11787714-C-A | ** | ||||||
13463829-A-C | 11308153-A-C | ** | ||||||
15689036-C-A | 13577156-C-A | ** | ||||||
13726353-T-A | 11570677-T-A | ** | ||||||
22185879-TTC-A | 20023993-TTC-A | ** | ||||||
4919030-G-T | 5050989-G-T | ** | ||||||
17338556-C-A | 15226676-C-A | ** | ||||||
7017966-T-G | 7149925-T-G | ** | ||||||
10772434-T-TC | ** | |||||||
10689045-T-A | ** | |||||||
11643441-T-A | ** | |||||||
56828701-T-G | ** | |||||||
13461031-A-T | 11305355-A-T | ** | ||||||
2740439-A-T | 2872398-A-T | ** | ||||||
2758177-G-T | 2890136-G-T | ** | ||||||
9440281-C-A | 9602672-C-A | ** | ||||||
4065867-C-A | 4197826-C-A | ** | ||||||
15107572-C-A | 12995659-C-A | ** | ||||||
4830396-G-T | 4962355-G-T | ** | ||||||
18159847-A-C | 16047967-A-C | ** | ||||||
4830046-T-C | 4962005-T-C | ** | ||||||
4672207-G-T | 4804166-G-T | ** | ||||||
4351396-G-T | 4483355-G-T | ** | ||||||
4302114-C-A | 4434073-C-A | ** | ||||||
4282572-C-A | 4414531-C-A | ** | ||||||
4282569-G-T | 4414528-G-T | ** | ||||||
4256760-T-A | 4388719-T-A | ** | ||||||
4233891-C-A | 4365850-C-A | ** | ||||||
4144119-C-A | 4276078-C-A | ** | ||||||
3790840-A-T | 3922799-A-T | ** | ||||||
10829630-A-T | ** | |||||||
3681386-G-T | 3813345-G-T | ** | ||||||
3641032-C-T | 3772991-C-T | ** | ||||||
3550598-A-AAAACC | 3682557-A-AAAACC | ** | ||||||
13909360-C-A | 11788654-C-A | ** | ||||||
28698831-C-A | 26552684-C-A | ** | ||||||
17466476-C-A | 15354596-C-A | ** | ||||||
3271473-C-A | 3403432-C-A | ** | ||||||
3267464-C-A | 3399423-C-A | ** | ||||||
3252453-T-G | 3384412-T-G | ** | ||||||
3091864-C-A | 3223823-C-A | ** | ||||||
3012715-C-A | 3144674-C-A | ** | ||||||
2855566-C-A | 2987525-C-A | ** | ||||||
2854771-C-A | 2986730-C-A | ** | ||||||
10772437-AT-A | ** | |||||||
13468948-T-G | 11313272-T-G | ** | ||||||
4863413-A-T | 4995372-A-T | ** | ||||||
18382641-C-CA | 16270761-C-CA | P6_Gap | 10×A | ** | ||||
10659616-C-T | ** | |||||||
10659613-C-T | ** | |||||||
10659612-A-T | ** | |||||||
10659600-T-C | ** | |||||||
10659572-C-G | ** | |||||||
10659557-C-CAGACT | ** | |||||||
10659552-C-T | ** | |||||||
10949500-A-T | ** | |||||||
17300712-C-T | 15188832-C-T | ** | ||||||
3625905-C-A | 3757864-C-A | ** | ||||||
7099937-C-A | 7231896-C-A | ** | ||||||
22951297-C-A | 20789411-C-A | ** | ||||||
20440400-T-TGTG | 18278514-T-TGTG | P5_Dst | ** | |||||
23188412-A-C | 21026526-A-C | ** | ||||||
13846919-C-A | 11726213-C-A | ** | ||||||
10782321-C-A | ** | |||||||
18740840-T-TTA | 16628960-T-TTA | ** | ||||||
20404507-C-A | 18242621-C-A | P5_Dst | ** | |||||
10824178-A-T | ** | |||||||
13718533-A-T | 11562857-A-T | ** | ||||||
10982413-C-T | ** | |||||||
19062140-C-A | 16950260-C-A | ** | ||||||
22875419-C-A | 20713533-C-A | ** | ||||||
10659577-T-C | ** | |||||||
28548572-CTT-C | 26402425-CTT-C | 10×T | ** | |||||
10883895-C-CCCATT | ** | |||||||
10887953-A-T | ** | |||||||
19187436-GA-G | 17075556-GA-G | ** | ||||||
10982365-T-C | ** | |||||||
56830120-C-T | ** | |||||||
8080417-C-A | 8212376-C-A | ** | ||||||
24751239-A-G | 22605092-A-G | P3_b2 | ** | |||||
14107764-C-A | 11987058-C-A | ** | ||||||
2926376-C-A | 3058335-C-A | ** | ||||||
21324088-G-T | 19162202-G-T | ** | ||||||
11643482-C-A | ** | |||||||
10949540-C-CCAT | ** | |||||||
13927975-C-A | 11807269-C-A | ** | ||||||
56734820-G-T | ** | |||||||
5824244-C-A | 5956203-C-A | ** | ||||||
10953951-G-T | ** | |||||||
23442581-C-A | 21280695-C-A | ** | ||||||
4244622-ATTT-A | 4376581-ATTT-A | 16×T | ** | |||||
21477116-T-G | 19315230-T-G | ** | ||||||
13871385-C-A | 11750679-C-A | ** | ||||||
3804764-G-T | 3936723-G-T | ** | ||||||
56836101-C-A | ** | |||||||
17434023-A-C | 15322143-A-C | ** | ||||||
5188579-C-A | 5320538-C-A | ** | ||||||
13488927-T-G | 11333251-T-G | ** | ||||||
22011585-G-A | 19849699-G-A | ** | ||||||
13987055-C-A | 11866349-C-A | ** | ||||||
13469581-C-A | 11313905-C-A | ** | ||||||
28689050-C-A | 26542903-C-A | ** | ||||||
21990518-C-A | 19828632-C-A | ** | ||||||
13317835-C-A | 11162159-C-A | ** | ||||||
7704937-C-A | 7836896-C-A | ** | ||||||
14584546-C-A | 12472746-C-A | ** | ||||||
10689580-C-A | ** | |||||||
4863399-T-A | 4995358-T-A | ** | ||||||
20840369-C-A | 18678483-C-A | P4_Gap | ** | |||||
4957676-A-C | 5089635-A-C | ** | ||||||
9442110-C-A | 9604501-C-A | ** | ||||||
10659542-C-T | ** | |||||||
10659537-CA-C | ** | |||||||
10659536-C-CT | ** | |||||||
10659527-C-T | ** | |||||||
10034337-C-A | 10196728-C-A | ** | ||||||
10032072-C-A | 10194463-C-A | ** | ||||||
9994807-A-C | 10157198-A-C | ** | ||||||
9980510-C-A | 10142901-C-A | ** | ||||||
9943465-T-C | 10105856-T-C | ** | ||||||
9885157-A-T | 10047548-A-T | ** | ||||||
9055472-ACT-A | 9217863-ACT-A | ** | ||||||
9457297-T-A | 9619688-T-A | ** | ||||||
9437339-C-A | 9599730-C-A | ** | ||||||
14581011-C-G | 12469211-C-G | M2175 CTS2947 | ** | |||||
9417082-A-C | 9579473-A-C | ** | ||||||
8976983-A-G | 9139374-A-G | ** | ||||||
9113823-T-C | ** | |||||||
8822719-T-G | 8954678-T-G | ** | ||||||
8697783-C-A | 8829742-C-A | ** | ||||||
8697773-C-A | 8829732-C-A | ** | ||||||
8697765-G-T | 8829724-G-T | ** | ||||||
17323720-AGGAG-A | 15211840-AGGAG-A | 4×GGAG | ** | |||||
8697750-A-T | 8829709-A-T | ** | ||||||
8697730-G-T | 8829689-G-T | ** | ||||||
18738823-ATATG-A | 16626943-ATATG-A | ** | ||||||
8525214-A-T | 8657173-A-T | ** | ||||||
10661122-C-A | ** | |||||||
10667004-C-CGGTTTA | ** | |||||||
8153633-T-G | 8285592-T-G | ** | ||||||
10691059-A-T | ** | |||||||
10829628-T-A | ** | |||||||
10829618-A-G | ** | |||||||
10829611-G-C | ** | |||||||
10829585-T-A | ** | |||||||
10829564-A-C | ** | |||||||
10824185-TC-T | ** | |||||||
10818839-TC-T | ** | |||||||
10772705-C-A | ** | |||||||
10765144-G-T | ** | |||||||
10761221-A-G | ** | |||||||
10761220-A-G | ** | |||||||
10691176-C-A | ** | |||||||
10689663-C-A | ** | |||||||
10668190-C-G | ** | |||||||
10689653-T-G | ** | |||||||
10689650-T-A | ** | |||||||
10689643-C-A | ** | |||||||
10689637-C-G | ** | |||||||
10689627-T-G | ** | |||||||
10689620-T-TGC | ** | |||||||
10689614-ACTC-A | ** | |||||||
10689588-C-G | ** | |||||||
10689583-A-C | FGC79228 | ** | ||||||
10686022-C-A | ** | |||||||
10672078-C-G | ** | |||||||
10671482-C-G | ** | |||||||
8170230-A-T | 8302189-A-T | ** | ||||||
8697744-C-A | 8829703-C-A | ** | ||||||
8119361-C-A | 8251320-C-A | ** | ||||||
5999491-C-A | 6131450-C-A | ** | ||||||
7053920-C-A | 7185879-C-A | ** | ||||||
7043600-G-T | 7175559-G-T | ** | ||||||
7012351-C-A | 7144310-C-A | ** | ||||||
6983902-C-A | 7115861-C-A | ** | ||||||
6930636-GT-G | 7062595-GT-G | ** | ||||||
6818876-G-A | 6950835-G-A | ** | ||||||
6774243-T-G | 6906202-T-G | ** | ||||||
6667386-A-T | 6799345-A-T | ** | ||||||
6647040-C-A | 6778999-C-A | ** | ||||||
6183318-G-T | 6315277-G-T | IR3_Dst | ** | |||||
28514729-C-A | 26368582-C-A | ** | ||||||
13488790-C-T | 11333114-C-T | ** | ||||||
6092255-T-G | 6224214-T-G | ** | ||||||
5969771-C-A | 6101730-C-A | ** | ||||||
7081051-C-A | 7213010-C-A | ** | ||||||
5910346-G-T | 6042305-G-T | ** | ||||||
6130228-G-T | 6262187-G-T | ** | ||||||
5905358-T-A | 6037317-T-A | ** | ||||||
5861692-C-A | 5993651-C-A | ** | ||||||
6130233-C-A | 6262192-C-A | ** | ||||||
5845273-C-T | 5977232-C-T | ** | ||||||
5535092-C-A | 5667051-C-A | ** | ||||||
5426454-C-A | 5558413-C-A | ** | ||||||
5254102-T-A | 5386061-T-A | ** | ||||||
5249704-C-A | 5381663-C-A | ** | ||||||
5247152-C-A | 5379111-C-A | ** | ||||||
5127715-T-A | 5259674-T-A | ** | ||||||
5127709-A-T | 5259668-A-T | ** | ||||||
8080657-C-A | 8212616-C-A | ** | ||||||
7053928-A-T | 7185887-A-T | ** | ||||||
7094413-C-A | 7226372-C-A | ** | ||||||
7337870-T-G | 7469829-T-G | ** | ||||||
21455681-C-A | 19293795-C-A | FGC42445 | ** | |||||
8080453-T-C | 8212412-T-C | ** | ||||||
8078854-G-T | 8210813-G-T | ** | ||||||
7699309-T-A | 7831268-T-A | ** | ||||||
58856005-G-T | 56734866-C-A | ** | ||||||
7670905-A-T | 7802864-A-T | ** | ||||||
7613833-GAAAA-G | 7745792-GAAAA-G | 31×A | ** | |||||
7524741-C-A | 7656700-C-A | ** | ||||||
13460972-G-C | 11305296-G-C | ** | ||||||
7418574-G-T | 7550533-G-T | ** | ||||||
7397758-A-T | 7529717-A-T | ** | ||||||
7353156-A-T | 7485115-A-T | ** | ||||||
15070445-T-A | 12958536-T-A | ** | ||||||
7294456-C-A | 7426415-C-A | ** | ||||||
7258644-G-A | 7390603-G-A | ** | ||||||
7337866-A-T | 7469825-A-T | ** | ||||||
7154595-A-T | 7286554-A-T | ** | ||||||
7236465-C-A | 7368424-C-A | ** | ||||||
16226324-T-TTA | 14114444-T-TTA | *** | ||||||
24446749-C-A | 22300602-C-A | *** | ||||||
58977284-A-T | 56831137-A-T | *** | ||||||
19322291-C-A | 17210411-C-A | *** | ||||||
6130244-G-T | 6262203-G-T | *** | ||||||
17279069-C-A | 15167189-C-A | *** | ||||||
28800499-AGGAGT-A | 26654352-AGGAGT-A | *** | ||||||
58982467-T-G | 56836320-T-G | *** | ||||||
23070772-CTT-C | 20908886-CTT-C | 29×T | *** | |||||
23619781-TA-T | 21457895-TA-T | 10×A | *** | |||||
56831125-T-C | *** | |||||||
56831156-G-GGT | *** | |||||||
23429889-C-A | 21268003-C-A | *** | ||||||
56831174-A-T | *** | |||||||
56831159-GGA-G | *** | |||||||
23650592-TTTTTA-T | 21488706-TTTTTA-T | *** | ||||||
56832475-TCCATTCCATTCCATTCCACC-T,TCCATTCCATTCCATTTCACT | *** | |||||||
58982471-G-A,T | 56836324-G-A,T | *** | ||||||
58982491-C-A,T | 56836344-C-A,T | *** | ||||||
23769971-G-A | 21608085-G-A | *** | ||||||
17408879-C-A | 15296999-C-A | *** | ||||||
23258104-TGAAGATGAG-T | 21096218-TGAAGATGAG-T | *** | ||||||
14147785-G-A | 12027079-G-A | *** | ||||||
15653028-C-A | 13541148-C-A | FGC68379 | *** | |||||
15495744-C-A | 13383864-C-A | *** | ||||||
6144737-GA-G,GAA | 6276696-GA-G,GAA | IR3_Dst | 12×A | *** | ||||
15324298-GGCATGA-G | 13212416-GGCATGA-G | *** | ||||||
15177287-C-A | 13065373-C-A | *** | ||||||
15158628-C-A | 13046714-C-A | *** | ||||||
14847004-CAAAA-C,CAAAAA | 12735070-CAAAA-C,CAAAAA | 20×A | *** | |||||
14467577-C-A | 12346846-C-A | *** | ||||||
7436339-C-A | 7568298-C-A | *** | ||||||
14201928-C-A | 12081222-C-A | *** | ||||||
14147784-T-C | 12027078-T-C | Y90444 | *** | |||||
16205703-C-A | 14093823-C-A | *** | ||||||
8599992-GTT-G | 8731951-GTT-G | 16×T | *** | |||||
13856078-AC-A | 11735372-AC-A | *** | ||||||
13801107-TGG-T | 11680401-TGG-T | *** | ||||||
8779446-C-A | 8911405-C-A | *** | ||||||
8819066-G-T | 8951025-G-T | *** | ||||||
9832720-G-A | 9995111-G-A | *** | ||||||
9852448-G-T | 10014839-G-T | *** | ||||||
13611095-C-A | 11455419-C-A | *** | ||||||
13454102-C-A | 11298426-C-A | *** | ||||||
10661234-T-C | *** | |||||||
13801123-G-C | 11680417-G-C | *** | ||||||
15975123-C-A | 13863243-C-A | *** | ||||||
16340147-GAAAA-G,GAAAAA | 14228267-GAAAA-G,GAAAAA | 22×A | *** | |||||
16029801-C-A | 13917921-C-A | *** | ||||||
19378077-A-G | 17266197-A-G | *** | ||||||
22776578-C-A | 20614692-C-A | *** | ||||||
22720680-GA-G | 20558794-GA-G | 9×A | *** | |||||
22301188-C-A | 20139302-C-A | DYZ19 | *** | |||||
22301177-C-A | 20139291-C-A | DYZ19 | *** | |||||
21990541-C-A | 19828655-C-A | *** | ||||||
11643777-T-C | *** | |||||||
6210549-CTT-C | 6342508-CTT-C | IR3_Dst | 14×T | *** | ||||
11014512-C-A | BY84145 | *** | ||||||
15405422-C-A | 13293542-C-A | *** | ||||||
8481844-C-A | 8613803-C-A | *** | ||||||
18959214-CAAAAA-C,CAAAA | 16847334-CAAAAA-C,CAAAA | 27×A | *** | |||||
3279761-C-A | 3411720-C-A | *** | ||||||
18743200-C-A | 16631320-C-A | *** | ||||||
18738833-A-G | 16626953-A-G | *** | ||||||
13294157-C-A | 11138481-C-A | *** | ||||||
16305924-CAAA-C | 14194044-CAAA-C | 24×A | *** | |||||
11014511-C-A | BY84144 | *** | ||||||
2649802-CAAAAAAAAA-C | 2781761-CAAAAAAAAA-C | 24×A | *** | |||||
18005811-C-A | 15893931-C-A | P7_Gap | *** | |||||
2700292-CTT-C | 2832251-CTT-C | 11×T | *** | |||||
17729945-C-A | 15618065-C-A | BY116969 | *** | |||||
17224601-C-A | 15112721-C-A | *** | ||||||
17210849-C-A | 15098969-C-A | *** | ||||||
56861769-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 366281 | 9226297 | 7603880 | 7539419 |
Used in age calculations | 9226297 | 7603880 | 7539419 |
Counts of SNPs | 2 | 1 |
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