Graves
BigY3: 1387, BigY2: 1387MDKA Birth:
United States > Rhode IslandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 1387 | BigY2 1387 |
|---|---|---|---|---|---|---|---|---|
| hg38:Y:11028239-C-T | A* | |||||||
| hg38:Y:56837031-C-T | A* | |||||||
| hg19:Y:4486931-C-T hg38:Y:4618890-C-T | A* | |||||||
| hg19:Y:9029781-G-A hg38:Y:9192172-G-A | Z16910 | BY11941 | Y | + | ** | |||
| hg19:Y:17907847-A-T hg38:Y:15795967-A-T | FT127100 | Y | Y | + | ||||
| hg19:Y:16408114-CCACA-C hg38:Y:14296234-CCACA-C | 19×CA | * | * | |||||
| hg19:Y:22279833-T-A hg38:Y:20117947-T-A | DYZ19 | *** | * | |||||
| hg19:Y:13478012-C-A hg38:Y:11322336-C-A | * | |||||||
| hg19:Y:13478054-G-C hg38:Y:11322378-G-C | * | |||||||
| hg19:Y:13478064-G-A hg38:Y:11322388-G-A | * | |||||||
| hg19:Y:21148624-G-A hg38:Y:18986738-G-A | FT48368 | ** | ||||||
| hg19:Y:21148628-G-A hg38:Y:18986742-G-A | ** | |||||||
| hg19:Y:24386992-CTA-C hg38:Y:22240845-CTA-C | ** | |||||||
| hg19:Y:4958355-C-A hg38:Y:5090314-C-A | T | FGC1197 | ** | |||||
| hg19:Y:16834725-C-T hg38:Y:14722845-C-T | ** | |||||||
| hg19:Y:14911932-C-T hg38:Y:12799999-C-T | ** | |||||||
| hg19:Y:20025589-C-A hg38:Y:17913709-C-A | P5_Prx | ** | ||||||
| hg19:Y:7303773-C-A hg38:Y:7435732-C-A | ** | |||||||
| hg19:Y:9416899-A-T hg38:Y:9579290-A-T | ** | |||||||
| hg19:Y:16015602-A-AT hg38:Y:13903722-A-AT | 9×T | ** | ||||||
| hg19:Y:13710348-G-T hg38:Y:11554672-G-T | DYZ17 | ** | ||||||
| hg38:Y:10974737-C-T | ** | |||||||
| hg38:Y:10974748-C-A | ** | |||||||
| hg38:Y:10974782-C-G | ** | |||||||
| hg19:Y:14397691-C-A hg38:Y:12276987-C-A | ** | |||||||
| hg38:Y:56845999-C-A | ** | |||||||
| hg38:Y:10959496-T-C | ** | |||||||
| hg19:Y:6922730-C-A hg38:Y:7054689-C-A | ** | |||||||
| hg38:Y:10651514-A-C | ** | |||||||
| hg19:Y:26010309-TAC-T hg38:Y:23864162-TAC-T | P1_Y1 | ** | ||||||
| hg19:Y:13858050-G-A hg38:Y:11737344-G-A | DYZ17 | ** | ||||||
| hg38:Y:11030272-A-G | ** | |||||||
| hg19:Y:6996576-C-A hg38:Y:7128535-C-A | ** | |||||||
| hg38:Y:10922399-C-A | ** | |||||||
| hg19:Y:8008146-T-G hg38:Y:8140105-T-G | ** | |||||||
| hg19:Y:20661840-CTA-C hg38:Y:18499954-CTA-C | P4_Prx | ** | ||||||
| hg38:Y:10921681-C-A | ** | |||||||
| hg38:Y:10971925-TC-T | ** | |||||||
| hg19:Y:6064096-C-A hg38:Y:6196055-C-A | ** | |||||||
| hg38:Y:11027008-C-A | ** | |||||||
| hg19:Y:27889362-A-G hg38:Y:25743215-A-G | P1_Y2 | ** | ||||||
| hg19:Y:16266084-C-A hg38:Y:14154204-C-A | ** | |||||||
| hg38:Y2:24223-C-A | ** | |||||||
| hg38:Y:10923623-C-G | ** | |||||||
| hg38:Y:10923626-C-T | ** | |||||||
| hg38:Y:10923629-C-A | ** | |||||||
| hg38:Y:10896128-T-G | ** | |||||||
| hg19:Y:10051310-C-A hg38:Y:10213701-C-A | ** | |||||||
| hg19:Y:23262525-C-A hg38:Y:21100639-C-A | ** | |||||||
| hg38:Y2:30045-T-A | ** | |||||||
| hg19:Y:18630831-A-G hg38:Y:16518951-A-G | ** | |||||||
| hg19:Y:9181061-A-T hg38:Y:9343452-A-T | ** | |||||||
| hg38:Y:10763018-T-G | ** | |||||||
| hg19:Y:4473465-G-T hg38:Y:4605424-G-T | ** | |||||||
| hg38:Y:10794241-T-C | ** | |||||||
| hg19:Y:14784872-ATTTT-A hg38:Y:12672942-ATTTT-A | 18×T | ** | ||||||
| hg19:Y:7434012-C-A hg38:Y:7565971-C-A | ** | |||||||
| hg19:Y:16336919-TTG-T hg38:Y:14225039-TTG-T | ** | |||||||
| hg19:Y:28818418-T-A hg38:Y:26672271-T-A | ** | |||||||
| hg19:Y:28818422-A-G hg38:Y:26672275-A-G | ** | |||||||
| hg19:Y:13457685-C-T hg38:Y:11302009-C-T | ** | |||||||
| hg19:Y:24241204-AC-A hg38:Y:22095057-AC-A | P3_b1 | ** | ||||||
| hg38:Y:10781308-C-G | ** | |||||||
| hg19:Y:20275328-G-T hg38:Y:18113442-G-T | P5_Dst | ** | ||||||
| hg38:Y:10930740-T-C | ** | |||||||
| hg19:Y:7015218-C-A hg38:Y:7147177-C-A | ** | |||||||
| hg38:Y:10792447-C-A | ** | |||||||
| hg38:Y:11651882-C-A | DYZ17 | ** | ||||||
| hg38:Y:10919944-A-G | ** | |||||||
| hg19:Y:7132178-C-A hg38:Y:7264137-C-A | ** | |||||||
| hg19:Y:9040224-G-T hg38:Y:9202615-G-T | ** | |||||||
| hg38:Y:10929841-C-G | ** | |||||||
| hg38:Y:10929850-A-G | ** | |||||||
| hg38:Y:10929860-G-C | ** | |||||||
| hg38:Y:10929871-G-T | ** | |||||||
| hg19:Y:19950188-GT-G hg38:Y:17838308-GT-G | P5_Prx | ** | ||||||
| hg19:Y:19558130-C-A hg38:Y:17446250-C-A | ** | |||||||
| hg19:Y:19183857-C-A hg38:Y:17071977-C-A | ** | |||||||
| hg19:Y:15127126-C-A hg38:Y:13015213-C-A | ** | |||||||
| hg19:Y:7134799-C-A hg38:Y:7266758-C-A | ** | |||||||
| hg19:Y:2817130-T-A hg38:Y:2949089-T-A | ** | |||||||
| hg19:Y:3110378-C-A hg38:Y:3242337-C-A | ** | |||||||
| hg19:Y:3611528-C-A hg38:Y:3743487-C-A | ** | |||||||
| hg19:Y:3627256-C-A hg38:Y:3759215-C-A | ** | |||||||
| hg19:Y:3680827-C-A hg38:Y:3812786-C-A | ** | |||||||
| hg19:Y:4017080-C-A hg38:Y:4149039-C-A | ** | |||||||
| hg19:Y:4034753-G-A hg38:Y:4166712-G-A | ** | |||||||
| hg19:Y:4256853-C-A hg38:Y:4388812-C-A | ** | |||||||
| hg19:Y:4383128-C-A hg38:Y:4515087-C-A | ** | |||||||
| hg19:Y:4388514-CCTGG-C hg38:Y:4520473-CCTGG-C | ** | |||||||
| hg19:Y:4630227-A-T hg38:Y:4762186-A-T | ** | |||||||
| hg19:Y:4630228-A-T hg38:Y:4762187-A-T | ** | |||||||
| hg19:Y:4630250-A-T hg38:Y:4762209-A-T | ** | |||||||
| hg19:Y:4630259-A-T hg38:Y:4762218-A-T | ** | |||||||
| hg19:Y:4958352-G-T hg38:Y:5090311-G-T | ** | |||||||
| hg19:Y:5189391-C-A hg38:Y:5321350-C-A | ** | |||||||
| hg19:Y:5230269-C-A hg38:Y:5362228-C-A | ** | |||||||
| hg19:Y:5366987-C-A hg38:Y:5498946-C-A | ** | |||||||
| hg19:Y:5785333-T-A hg38:Y:5917292-T-A | ** | |||||||
| hg19:Y:5867285-T-G hg38:Y:5999244-T-G | ** | |||||||
| hg19:Y:6091021-C-A hg38:Y:6222980-C-A | ** | |||||||
| hg19:Y:6250138-C-A hg38:Y:6382097-C-A | IR3_Dst | ** | ||||||
| hg19:Y:6293356-TTTTTTTGTTTTGTTTTG-T hg38:Y:6425315-TTTTTTTGTTTTGTTTTG-T | IR3_Dst | ** | ||||||
| hg19:Y:6346168-C-A hg38:Y:6478127-C-A | ** | |||||||
| hg19:Y:6511983-C-A hg38:Y:6643942-C-A | ** | |||||||
| hg19:Y:6596792-C-A hg38:Y:6728751-C-A | ** | |||||||
| hg19:Y:6881239-T-C hg38:Y:7013198-T-C | ** | |||||||
| hg19:Y:6976552-C-A hg38:Y:7108511-C-A | ** | |||||||
| hg19:Y:7061698-G-T hg38:Y:7193657-G-T | ** | |||||||
| hg19:Y:7094371-C-A hg38:Y:7226330-C-A | ** | |||||||
| hg19:Y:7214416-C-A hg38:Y:7346375-C-A | ** | |||||||
| hg19:Y:7221504-T-A hg38:Y:7353463-T-A | ** | |||||||
| hg19:Y:7270410-C-T hg38:Y:7402369-C-T | ** | |||||||
| hg19:Y:7275536-C-A hg38:Y:7407495-C-A | ** | |||||||
| hg19:Y:7277596-A-C hg38:Y:7409555-A-C | ** | |||||||
| hg19:Y:7287766-C-A hg38:Y:7419725-C-A | ** | |||||||
| hg19:Y:7322956-C-A hg38:Y:7454915-C-A | ** | |||||||
| hg19:Y:7536441-T-C hg38:Y:7668400-T-C | ** | |||||||
| hg19:Y:7536444-G-A hg38:Y:7668403-G-A | ** | |||||||
| hg19:Y:7635936-C-A hg38:Y:7767895-C-A | ** | |||||||
| hg19:Y:7650303-G-T hg38:Y:7782262-G-T | ** | |||||||
| hg19:Y:7868110-C-A hg38:Y:8000069-C-A | ** | |||||||
| hg19:Y:7990381-C-A hg38:Y:8122340-C-A | ** | |||||||
| hg19:Y:8090742-C-T hg38:Y:8222701-C-T | ** | |||||||
| hg19:Y:8134617-T-C hg38:Y:8266576-T-C | ** | |||||||
| hg19:Y:8296652-C-A hg38:Y:8428611-C-A | ** | |||||||
| hg19:Y:9063878-G-T hg38:Y:9226269-G-T | ** | |||||||
| hg19:Y:9181072-C-G hg38:Y:9343463-C-G | 14×AT | ** | ||||||
| hg19:Y:9700809-T-A hg38:Y:9863200-T-A | IR3_Prx | ** | ||||||
| hg19:Y:9826111-A-C hg38:Y:9988502-A-C | ** | |||||||
| hg38:Y:10628109-A-T | ** | |||||||
| hg38:Y:10628196-C-A | ** | |||||||
| hg38:Y:10653308-C-A | ** | |||||||
| hg38:Y:10654416-C-A | ** | |||||||
| hg38:Y:10655014-C-A | ** | |||||||
| hg38:Y:10667144-C-A | ** | |||||||
| hg38:Y:10668179-A-C | ** | |||||||
| hg38:Y:10684083-C-A | ** | |||||||
| hg38:Y:10687525-C-A | ** | |||||||
| hg38:Y:10746111-T-G | ** | |||||||
| hg38:Y:10749367-C-A | ** | |||||||
| hg38:Y:10749733-A-T | ** | |||||||
| hg38:Y:10753531-T-A | ** | |||||||
| hg38:Y:10753539-C-A | ** | |||||||
| hg38:Y:10759140-G-C | ** | |||||||
| hg38:Y:10762981-C-G | ** | |||||||
| hg38:Y:10771948-T-C | ** | |||||||
| hg38:Y:10771953-T-C | ** | |||||||
| hg38:Y:10771965-G-A | ** | |||||||
| hg38:Y:10771981-T-C | ** | |||||||
| hg38:Y:10775949-C-A | ** | |||||||
| hg38:Y:10781336-T-G | ** | |||||||
| hg38:Y:10792440-T-TCCGTC | ** | |||||||
| hg38:Y:10794301-T-C | ** | |||||||
| hg38:Y:10801294-T-C | ** | |||||||
| hg38:Y:10823486-T-C | ** | |||||||
| hg38:Y:10834830-G-C | ** | |||||||
| hg38:Y:10834833-T-C | ** | |||||||
| hg38:Y:10834839-A-C | ** | |||||||
| hg38:Y:10839487-C-A | ** | |||||||
| hg38:Y:10839784-C-A | ** | |||||||
| hg38:Y:10841035-TC-T | ** | |||||||
| hg38:Y:10842493-A-T | ** | |||||||
| hg38:Y:10852153-G-A | ** | |||||||
| hg38:Y:10861682-G-C | ** | |||||||
| hg38:Y:10861693-G-GC | ** | |||||||
| hg38:Y:10861931-A-C | ** | |||||||
| hg38:Y:10862346-C-A | ** | |||||||
| hg38:Y:10872335-C-A | ** | |||||||
| hg38:Y:10872390-T-C | ** | |||||||
| hg38:Y:10883377-T-G | FT435426 | ** | ||||||
| hg38:Y:10889112-C-A | ** | |||||||
| hg38:Y:10894017-G-T | ** | |||||||
| hg38:Y:10894053-C-G | ** | |||||||
| hg38:Y:10907848-A-T | ** | |||||||
| hg38:Y:10907897-AG-A | ** | |||||||
| hg38:Y:10912803-G-T | ** | |||||||
| hg38:Y:10919949-T-G | ** | |||||||
| hg38:Y:10919952-C-G | ** | |||||||
| hg38:Y:10919955-G-C | ** | |||||||
| hg38:Y:10919984-G-T | ** | |||||||
| hg38:Y:10919988-G-A | ** | |||||||
| hg38:Y:10919990-T-G | ** | |||||||
| hg38:Y:10919995-T-C | ** | |||||||
| hg38:Y:10919999-G-T | ** | |||||||
| hg38:Y:10920005-G-A | ** | |||||||
| hg38:Y:10921628-A-T | ** | |||||||
| hg38:Y:10928006-TTCCACTCCATTGAATTCCACTCCACTCCATTTCACTCGTTCCACTCCATTCCAC-T | ** | |||||||
| hg38:Y:10930741-C-A | ** | |||||||
| hg38:Y:10930747-T-A | ** | |||||||
| hg38:Y:10930754-T-A | ** | |||||||
| hg38:Y:10938393-A-T | FT437350 | ** | ||||||
| hg38:Y:10938415-T-A | ** | |||||||
| hg38:Y:10938417-CATTAT-C | ** | |||||||
| hg38:Y:10941438-A-C | ** | |||||||
| hg38:Y:10954653-T-G | ** | |||||||
| hg38:Y:10959524-T-G | ** | |||||||
| hg38:Y:10959529-G-C | ** | |||||||
| hg38:Y:10963347-C-G | ** | |||||||
| hg38:Y:10976388-A-C | FT438843 | ** | ||||||
| hg38:Y:10976921-T-A | ** | |||||||
| hg38:Y:10976939-G-T | ** | |||||||
| hg38:Y:10976943-C-G | ** | |||||||
| hg38:Y:10976972-T-A | ** | |||||||
| hg38:Y:10976975-T-TTCTATTCGGG | ** | |||||||
| hg38:Y:10977500-C-A | ** | |||||||
| hg38:Y:10980833-C-A | ** | |||||||
| hg38:Y:10981486-T-C | ** | |||||||
| hg38:Y:10987960-G-A | ** | |||||||
| hg38:Y:10989074-C-G | ** | |||||||
| hg38:Y:10989106-CCACACCACTG-C | ** | |||||||
| hg38:Y:10997527-C-A | ** | |||||||
| hg38:Y:10997604-T-C | ** | |||||||
| hg38:Y:10997630-C-T | ** | |||||||
| hg38:Y:10997648-T-C | ** | |||||||
| hg38:Y:10997649-T-C | ** | |||||||
| hg38:Y:10997653-A-C | ** | |||||||
| hg38:Y:10997656-C-G | ** | |||||||
| hg38:Y:10997659-A-G | ** | |||||||
| hg38:Y:10997663-C-T | ** | |||||||
| hg38:Y:10997678-T-A | ** | |||||||
| hg38:Y:10997691-C-A | ** | |||||||
| hg38:Y:11006705-C-T | FT393442 | ** | ||||||
| hg38:Y:11006895-TCATTC-T | ** | |||||||
| hg38:Y:11008085-A-T | ** | |||||||
| hg38:Y:11025288-C-A | ** | |||||||
| hg38:Y:11027825-A-T | ** | |||||||
| hg19:Y:13223683-G-T hg38:Y:11068007-G-T | ** | |||||||
| hg19:Y:13229756-C-A hg38:Y:11074080-C-A | ** | |||||||
| hg19:Y:13254580-C-A hg38:Y:11098904-C-A | ** | |||||||
| hg19:Y:13258429-A-C hg38:Y:11102753-A-C | ** | |||||||
| hg19:Y:13272296-C-A hg38:Y:11116620-C-A | ** | |||||||
| hg19:Y:13317825-C-A hg38:Y:11162149-C-A | ** | |||||||
| hg19:Y:13441643-A-AG hg38:Y:11285967-A-AG | ** | |||||||
| hg19:Y:13457725-C-CTTTA hg38:Y:11302049-C-CTTTA | ** | |||||||
| hg38:Y:11644847-A-C | DYZ17 | ** | ||||||
| hg38:Y:11644892-G-T | DYZ17 | ** | ||||||
| hg38:Y:11649002-A-G | DYZ17 | ** | ||||||
| hg38:Y:11653871-T-C | DYZ17 | ** | ||||||
| hg38:Y:11653895-T-A | DYZ17 | ** | ||||||
| hg38:Y:11663852-A-G | DYZ17 | ** | ||||||
| hg38:Y:11664766-G-T | DYZ17 | ** | ||||||
| hg38:Y:11665197-A-G | FT450873 | DYZ17 | ** | |||||
| hg38:Y:11675286-C-A | DYZ17 | ** | ||||||
| hg19:Y:13856101-G-T hg38:Y:11735395-G-T | DYZ17 | ** | ||||||
| hg19:Y:13874626-C-A hg38:Y:11753920-C-A | ** | |||||||
| hg19:Y:13885854-TTTC-T hg38:Y:11765148-TTTC-T | ** | |||||||
| hg19:Y:13909324-G-T hg38:Y:11788618-G-T | ** | |||||||
| hg19:Y:13928309-C-A hg38:Y:11807603-C-A | ** | |||||||
| hg19:Y:13939219-A-T hg38:Y:11818513-A-T | ** | |||||||
| hg19:Y:14067263-C-A hg38:Y:11946557-C-A | ** | |||||||
| hg19:Y:14230168-G-T hg38:Y:12109462-G-T | ** | |||||||
| hg19:Y:14295366-C-A hg38:Y:12174660-C-A | ** | |||||||
| hg19:Y:14339432-A-G hg38:Y:12218727-A-G | ** | |||||||
| hg19:Y:14366477-C-A hg38:Y:12245772-C-A | ** | |||||||
| hg19:Y:14461231-T-G hg38:Y:12340504-T-G | ** | |||||||
| hg19:Y:14510036-C-A hg38:Y:12398241-C-A | ** | |||||||
| hg19:Y:14525621-C-A hg38:Y:12413822-C-A | ** | |||||||
| hg19:Y:14649598-C-A hg38:Y:12537663-C-A | ** | |||||||
| hg19:Y:14931758-C-A hg38:Y:12819823-C-A | ** | |||||||
| hg19:Y:15012296-C-CTT hg38:Y:12900384-C-CTT | 17×T | ** | ||||||
| hg19:Y:15173515-C-A hg38:Y:13061601-C-A | ** | |||||||
| hg19:Y:15263618-C-A hg38:Y:13151708-C-A | ** | |||||||
| hg19:Y:15396751-C-A hg38:Y:13284871-C-A | ** | |||||||
| hg19:Y:15585059-C-A hg38:Y:13473179-C-A | ** | |||||||
| hg19:Y:15636022-C-A hg38:Y:13524142-C-A | ** | |||||||
| hg19:Y:15791243-C-A hg38:Y:13679363-C-A | ** | |||||||
| hg19:Y:16050058-C-A hg38:Y:13938178-C-A | ** | |||||||
| hg19:Y:16070719-T-G hg38:Y:13958839-T-G | ** | |||||||
| hg19:Y:16075239-A-G hg38:Y:13963359-A-G | ** | |||||||
| hg19:Y:16102024-TTTTG-T hg38:Y:13990144-TTTTG-T | P8_Prx | ** | ||||||
| hg19:Y:16176612-C-A hg38:Y:14064732-C-A | ** | |||||||
| hg19:Y:16220877-C-A hg38:Y:14108997-C-A | ** | |||||||
| hg19:Y:16220980-C-A hg38:Y:14109100-C-A | ** | |||||||
| hg19:Y:16466477-G-T hg38:Y:14354597-G-T | ** | |||||||
| hg19:Y:16508702-C-A hg38:Y:14396822-C-A | ** | |||||||
| hg19:Y:16620826-G-T hg38:Y:14508946-G-T | ** | |||||||
| hg19:Y:16648266-A-C hg38:Y:14536386-A-C | ** | |||||||
| hg19:Y:16829009-C-G hg38:Y:14717129-C-G | ** | |||||||
| hg19:Y:16834608-G-A hg38:Y:14722728-G-A | ** | |||||||
| hg19:Y:16834639-T-A hg38:Y:14722759-T-A | ** | |||||||
| hg19:Y:16834663-C-A hg38:Y:14722783-C-A | ** | |||||||
| hg19:Y:16834695-C-T hg38:Y:14722815-C-T | ** | |||||||
| hg19:Y:16834708-C-T hg38:Y:14722828-C-T | ** | |||||||
| hg19:Y:16834711-C-G hg38:Y:14722831-C-G | ** | |||||||
| hg19:Y:16863612-T-C hg38:Y:14751732-T-C | ** | |||||||
| hg19:Y:16865154-G-A hg38:Y:14753274-G-A | ** | |||||||
| hg19:Y:16952647-C-A hg38:Y:14840767-C-A | ** | |||||||
| hg19:Y:17090746-A-C hg38:Y:14978866-A-C | ** | |||||||
| hg19:Y:17426249-C-A hg38:Y:15314369-C-A | ** | |||||||
| hg19:Y:17858852-G-T hg38:Y:15746972-G-T | ** | |||||||
| hg19:Y:17912979-C-A hg38:Y:15801099-C-A | ** | |||||||
| hg19:Y:17929762-G-T hg38:Y:15817882-G-T | ** | |||||||
| hg19:Y:18040404-A-G hg38:Y:15928524-A-G | ** | |||||||
| hg19:Y:18059767-T-G hg38:Y:15947887-T-G | ** | |||||||
| hg19:Y:18190333-C-A hg38:Y:16078453-C-A | ** | |||||||
| hg19:Y:18263610-T-C hg38:Y:16151730-T-C | ** | |||||||
| hg19:Y:18329059-T-G hg38:Y:16217179-T-G | P6_Prx | ** | ||||||
| hg19:Y:18329073-A-C hg38:Y:16217193-A-C | P6_Prx | ** | ||||||
| hg19:Y:18630826-A-G hg38:Y:16518946-A-G | ** | |||||||
| hg19:Y:18688473-T-A hg38:Y:16576593-T-A | ** | |||||||
| hg19:Y:18710307-C-A hg38:Y:16598427-C-A | ** | |||||||
| hg19:Y:18733607-G-C hg38:Y:16621727-G-C | ** | |||||||
| hg19:Y:18819006-A-G hg38:Y:16707126-A-G | ** | |||||||
| hg19:Y:18819491-G-T hg38:Y:16707611-G-T | ** | |||||||
| hg19:Y:18853562-C-A hg38:Y:16741682-C-A | ** | |||||||
| hg19:Y:19081329-T-G hg38:Y:16969449-T-G | ** | |||||||
| hg19:Y:19275244-A-C hg38:Y:17163364-A-C | ** | |||||||
| hg19:Y:19391345-C-A hg38:Y:17279465-C-A | ** | |||||||
| hg19:Y:19463334-G-A hg38:Y:17351454-G-A | ** | |||||||
| hg19:Y:19557412-G-T hg38:Y:17445532-G-T | ** | |||||||
| hg19:Y:19562489-C-A hg38:Y:17450609-C-A | Z30112 | ** | ||||||
| hg19:Y:19719310-A-C hg38:Y:17607430-A-C | P5_Prx | ** | ||||||
| hg19:Y:19758868-C-A hg38:Y:17646988-C-A | P5_Prx | ** | ||||||
| hg19:Y:19837322-C-A hg38:Y:17725442-C-A | P5_Prx | ** | ||||||
| hg19:Y:19924600-A-C hg38:Y:17812720-A-C | P5_Prx | ** | ||||||
| hg19:Y:19963794-TTACG-T hg38:Y:17851914-TTACG-T | P5_Prx | ** | ||||||
| hg19:Y:19963812-G-T hg38:Y:17851932-G-T | P5_Prx | ** | ||||||
| hg19:Y:20052745-C-A hg38:Y:17940865-C-A | P5_Prx | ** | ||||||
| hg19:Y:20052751-A-T hg38:Y:17940871-A-T | P5_Prx | ** | ||||||
| hg19:Y:20275297-A-T hg38:Y:18113411-A-T | P5_Dst | ** | ||||||
| hg19:Y:20275300-A-T hg38:Y:18113414-A-T | P5_Dst | ** | ||||||
| hg19:Y:20275309-C-G hg38:Y:18113423-C-G | P5_Dst | ** | ||||||
| hg19:Y:20346145-A-T hg38:Y:18184259-A-T | P5_Dst | ** | ||||||
| hg19:Y:20346159-C-A hg38:Y:18184273-C-A | P5_Dst | ** | ||||||
| hg19:Y:20346171-A-T hg38:Y:18184285-A-T | P5_Dst | ** | ||||||
| hg19:Y:20495318-C-A hg38:Y:18333432-C-A | P5_Dst | ** | ||||||
| hg19:Y:20567563-A-G hg38:Y:18405677-A-G | P5_Dst | ** | ||||||
| hg19:Y:20567565-A-ATG hg38:Y:18405679-A-ATG | P5_Dst | ** | ||||||
| hg19:Y:20567567-A-AGG hg38:Y:18405681-A-AGG | P5_Dst | ** | ||||||
| hg19:Y:20579248-C-T hg38:Y:18417362-C-T | P5_Dst | ** | ||||||
| hg19:Y:20598893-A-T hg38:Y:18437007-A-T | P5_Dst | ** | ||||||
| hg19:Y:20653849-A-T hg38:Y:18491963-A-T | P4_Prx | ** | ||||||
| hg19:Y:20701215-T-TC hg38:Y:18539329-T-TC | P4_Prx | ** | ||||||
| hg19:Y:20750704-T-G hg38:Y:18588818-T-G | P4_Prx | ** | ||||||
| hg19:Y:21133578-AAG-A hg38:Y:18971692-AAG-A | ** | |||||||
| hg19:Y:21427363-C-A hg38:Y:19265477-C-A | ** | |||||||
| hg19:Y:21565952-T-A hg38:Y:19404066-T-A | ** | |||||||
| hg19:Y:21714627-T-G hg38:Y:19552741-T-G | ** | |||||||
| hg19:Y:21948874-C-A hg38:Y:19786988-C-A | ** | |||||||
| hg19:Y:21958529-C-A hg38:Y:19796643-C-A | ** | |||||||
| hg19:Y:22022723-C-A hg38:Y:19860837-C-A | ** | |||||||
| hg19:Y:22164120-A-T hg38:Y:20002234-A-T | ** | |||||||
| hg19:Y:22204464-G-T hg38:Y:20042578-G-T | ** | |||||||
| hg19:Y:22276872-C-A hg38:Y:20114986-C-A | DYZ19 | ** | ||||||
| hg19:Y:22838938-C-A hg38:Y:20677052-C-A | ** | |||||||
| hg19:Y:22870782-C-A hg38:Y:20708896-C-A | ** | |||||||
| hg19:Y:23026689-A-C hg38:Y:20864803-A-C | ** | |||||||
| hg19:Y:23035926-A-C hg38:Y:20874040-A-C | ** | |||||||
| hg19:Y:23099854-C-A hg38:Y:20937968-C-A | ** | |||||||
| hg19:Y:23127954-C-A hg38:Y:20966068-C-A | ** | |||||||
| hg19:Y:23142431-T-G hg38:Y:20980545-T-G | ** | |||||||
| hg19:Y:23145960-C-A hg38:Y:20984074-C-A | ** | |||||||
| hg19:Y:23464699-G-T hg38:Y:21302813-G-T | ** | |||||||
| hg19:Y:23823520-C-A hg38:Y:21661634-C-A | ** | |||||||
| hg19:Y:23832842-C-A hg38:Y:21670956-C-A | ** | |||||||
| hg19:Y:23848617-G-T hg38:Y:21686731-G-T | ** | |||||||
| hg38:Y:21754259-A-G | ** | |||||||
| hg19:Y:24248908-A-C hg38:Y:22102761-A-C | P3_b1 | ** | ||||||
| hg19:Y:24296225-T-G hg38:Y:22150078-T-G | P3_t1 | ** | ||||||
| hg19:Y:25901421-T-G hg38:Y:23755274-T-G | P1_Y1 | ** | ||||||
| hg19:Y:25901427-A-T hg38:Y:23755280-A-T | P1_Y1 | ** | ||||||
| hg19:Y:25901439-A-T hg38:Y:23755292-A-T | P1_Y1 | ** | ||||||
| hg19:Y:25995548-GTA-G hg38:Y:23849401-GTA-G | P1_Y1 | ** | ||||||
| hg19:Y:26117855-A-AC hg38:Y:23971708-A-AC | P1_Y1 | ** | ||||||
| hg19:Y:26185591-A-T hg38:Y:24039444-A-T | P1_Y1 | ** | ||||||
| hg19:Y:27447486-GT-G hg38:Y:25301339-GT-G | P1_Y2 | ** | ||||||
| hg19:Y:27633716-A-C hg38:Y:25487569-A-C | P1_Y2 | ** | ||||||
| hg19:Y:27861552-G-A hg38:Y:25715405-G-A | P1_Y2 | ** | ||||||
| hg19:Y:28504713-C-A hg38:Y:26358566-C-A | ** | |||||||
| hg19:Y:28537107-C-A hg38:Y:26390960-C-A | ** | |||||||
| hg19:Y:28558455-T-G hg38:Y:26412308-T-G | ** | |||||||
| hg19:Y:28570344-C-A hg38:Y:26424197-C-A | ** | |||||||
| hg19:Y:28643844-C-T hg38:Y:26497697-C-T | ** | |||||||
| hg19:Y:28649293-C-A hg38:Y:26503146-C-A | ** | |||||||
| hg19:Y:28761381-T-A hg38:Y:26615234-T-A | ** | |||||||
| hg19:Y:28798279-A-C hg38:Y:26652132-A-C | ** | |||||||
| hg19:Y:28798306-G-T hg38:Y:26652159-G-T | ** | |||||||
| hg19:Y:28818153-A-G hg38:Y:26672006-A-G | ** | |||||||
| hg38:Y:56722450-G-T | ** | |||||||
| hg38:Y:56722459-G-T | ** | |||||||
| hg38:Y:56722465-C-G | ** | |||||||
| hg38:Y:56722469-G-T | ** | |||||||
| hg38:Y:56722474-G-T | ** | |||||||
| hg38:Y:56722484-C-G | ** | |||||||
| hg38:Y:56838489-A-T | ** | |||||||
| hg38:Y:56846036-G-T | ** | |||||||
| hg38:Y:56858574-C-A | ** | |||||||
| hg38:Y2:14811-C-A | ** | |||||||
| hg19:Y:15963188-C-T hg38:Y:13851308-C-T | ** | |||||||
| hg19:Y:22241658-C-T hg38:Y:20079772-C-T | FT453603 | DYZ19 | ** | |||||
| hg19:Y:22986413-A-G hg38:Y:20824527-A-G | ** | |||||||
| hg19:Y:23009825-A-T hg38:Y:20847939-A-T | ** | |||||||
| hg19:Y:13858101-G-T hg38:Y:11737395-G-T | FTA43200 | DYZ17 | *** | |||||
| hg19:Y:8686393-T-C hg38:Y:8818352-T-C | Z5299 | *** | ||||||
| hg19:Y:13476625-C-A hg38:Y:11320949-C-A | *** | |||||||
| hg19:Y:9169928-C-A hg38:Y:9332319-C-A | Y29027 | Y29023 | *** | |||||
| hg19:Y:23807578-CAAAAAAA-C hg38:Y:21645692-CAAAAAAA-C | 21×A | *** | ||||||
| hg19:Y:15394196-G-C hg38:Y:13282316-G-C | *** | |||||||
| hg19:Y:22236196-T-C hg38:Y:20074310-T-C | DYZ19 | *** | ||||||
| hg19:Y:22802868-ATTTTTT-A hg38:Y:20640982-ATTTTTT-A | 32×T | *** | ||||||
| hg19:Y:23381150-C-A hg38:Y:21219264-C-A | *** | |||||||
| hg38:Y:10796116-C-A | *** | |||||||
| hg19:Y:13858041-G-T hg38:Y:11737335-G-T | DYZ17 | *** | ||||||
| hg19:Y:13858073-A-C hg38:Y:11737367-A-C | DYZ17 | *** | ||||||
| hg38:Y:11677454-ATG-A | DYZ17 | *** | ||||||
| hg38:Y:10824205-T-G | *** | |||||||
| hg38:Y:11028296-T-C | *** | |||||||
| hg38:Y:11028303-T-G | *** | |||||||
| hg19:Y:17158968-CTTTT-C hg38:Y:15047088-CTTTT-C | 26×T | *** | ||||||
| hg19:Y:4521779-C-A hg38:Y:4653738-C-A | *** | |||||||
| hg19:Y:7280952-CTT-C,CTTT hg38:Y:7412911-CTT-C,CTTT | 26×T | *** | ||||||
| hg19:Y:8672982-G-T hg38:Y:8804941-G-T | *** | |||||||
| hg19:Y:9524354-C-CAAAA hg38:Y:9686745-C-CAAAA | 13×A | *** | ||||||
| hg38:Y:10893252-G-T | *** | |||||||
| hg38:Y:10932720-C-T | *** | |||||||
| hg38:Y:10940988-C-A | *** | |||||||
| hg38:Y:10952730-C-A | *** | |||||||
| hg38:Y:10952744-C-A | *** | |||||||
| hg38:Y:10971965-TCCATTC-T,TCCTTTC | *** | |||||||
| hg38:Y:11027345-C-A | *** | |||||||
| hg38:Y:11645969-C-A | DYZ17 | *** | ||||||
| hg19:Y:13824740-T-A hg38:Y:11704034-T-A | DYZ17 | *** | ||||||
| hg19:Y:13824756-GCA-G hg38:Y:11704050-GCA-G | DYZ17 | *** | ||||||
| hg19:Y:13858086-GAATC-G hg38:Y:11737380-GAATC-G | DYZ17 | *** | ||||||
| hg19:Y:14413210-CAAAAAAA-C,CAAAAAAAA hg38:Y:12292507-CAAAAAAA-C,CAAAAAAAA | 23×A | *** | ||||||
| hg19:Y:14768649-CA-C hg38:Y:12656718-CA-C | *** | |||||||
| hg19:Y:15279239-C-A hg38:Y:13167338-C-A | *** | |||||||
| hg19:Y:15507783-GTTTTTT-G hg38:Y:13395903-GTTTTTT-G | 25×T | *** | ||||||
| hg19:Y:15710379-C-A hg38:Y:13598499-C-A | *** | |||||||
| hg19:Y:15824095-C-A hg38:Y:13712215-C-A | *** | |||||||
| hg19:Y:16404238-A-G hg38:Y:14292358-A-G | *** | |||||||
| hg19:Y:17357250-C-A hg38:Y:15245370-C-A | *** | |||||||
| hg19:Y:19133690-C-A hg38:Y:17021810-C-A | *** | |||||||
| hg19:Y:19469877-A-ACC hg38:Y:17357997-A-ACC | 12×C | *** | ||||||
| hg19:Y:21066461-C-A hg38:Y:18904575-C-A | *** | |||||||
| hg19:Y:22138201-A-G hg38:Y:19976315-A-G | *** | |||||||
| hg19:Y:23046239-A-G hg38:Y:20884353-A-G | Z37952 | *** | ||||||
| hg19:Y:24517660-C-CT hg38:Y:22371513-C-CT | 9×T | *** | ||||||
| hg38:Y:56835488-CT-C | *** | |||||||
| hg38:Y:56861285-C-CTT | 18×T | *** | ||||||
| hg19:Y:23633371-CT-C,CTT hg38:Y:21471485-CT-C,CTT | 21×T | *** | ||||||
| hg19:Y:13478065-C-T hg38:Y:11322389-C-T | *** | |||||||
| hg19:Y:4511190-G-A hg38:Y:4643149-G-A | *** | |||||||
| hg19:Y:8016938-CTT-C,CT hg38:Y:8148897-CTT-C,CT | 25×T | *** | ||||||
| hg19:Y:4890660-CAAA-C,CAA hg38:Y:5022619-CAAA-C,CAA | 18×A | *** | ||||||
| hg19:Y:13478081-T-A hg38:Y:11322405-T-A | *** | |||||||
| hg19:Y:6114884-T-C hg38:Y:6246843-T-C | *** | |||||||
| hg19:Y:13455819-C-A hg38:Y:11300143-C-A | *** | |||||||
| hg19:Y:14464708-C-CT hg38:Y:12343981-C-CT | 9×T | *** | ||||||
| hg19:Y:14565167-C-G hg38:Y:12453367-C-G | *** | |||||||
| hg19:Y:14565777-T-C hg38:Y:12453977-T-C | *** | |||||||
| hg19:Y:22471790-T-C hg38:Y:20309904-T-C | DYZ19 | *** | ||||||
| hg19:Y:23857893-A-G hg38:Y:21696007-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 1387 | 9682219 | 7893615 | 7774933 |
| Kit: 1387 | 15007197 | 9394959 | 8330016 |
| Used in age calculations | 15007197 | 9394959 | 8330016 |
| Counts of SNPs | 1 | 2 |
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