O'Neill
FTDNA: 244292, BigY2: 244292Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 244292 | BigY2 244292 |
---|---|---|---|---|---|---|---|---|---|
7083186-C-T | 7215145-C-T | Y | Y | + | + | ||||
21168802-T-C | 19006916-T-C | Y105616 | Y | Y | + | + | |||
8600354-G-A | 8732313-G-A | Y87437 | Y | Y | + | + | |||
22538421-T-TA | 20376535-T-TA | + | + | ||||||
27842234-AGAAG-A | 25696087-AGAAG-A | P1_Y2 | 8×GAAG | + | |||||
6108948-C-G | 6240907-C-G | FT81666 | + | ** | |||||
19485408-A-G | 17373528-A-G | Y104920 | Y | + | + | ||||
6733269-CA-C | 6865228-CA-C | 10×A | *** | * | |||||
22255515-A-C | 20093629-A-C | DYZ19 | * | ||||||
10990467-A-G | ** | ||||||||
10995724-C-A | ** | ||||||||
10997286-G-A | ** | ||||||||
11008165-A-G | ** | ||||||||
56843648-T-C | ** | ||||||||
13213328-T-G | 11057652-T-G | ** | |||||||
13225815-A-G | 11070139-A-G | ** | |||||||
13238257-T-A | 11082581-T-A | ** | |||||||
13248346-A-G | 11092670-A-G | ** | |||||||
13251156-G-C | 11095480-G-C | ** | |||||||
13256470-A-G | 11100794-A-G | ** | |||||||
13321053-T-C | 11165377-T-C | ** | |||||||
13225813-A-G | 11070137-A-G | ** | |||||||
10983260-A-C | ** | ||||||||
10984120-C-A | ** | ||||||||
10880993-C-T | ** | ||||||||
10798311-AATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCC-A | ** | ||||||||
10814366-T-C | ** | ||||||||
10817582-T-C | ** | ||||||||
10820719-C-A | ** | ||||||||
10832676-G-A | ** | ||||||||
10838870-C-A | ** | ||||||||
10844666-T-C | ** | ||||||||
10850548-T-G | ** | ||||||||
10887469-A-ACTC | ** | ||||||||
13372498-C-A | 11216822-C-A | ** | |||||||
10887471-AACT-A | ** | ||||||||
10892433-C-A | ** | ||||||||
10892721-C-A | ** | ||||||||
10940667-C-A | ** | ||||||||
10941411-C-A | ** | ||||||||
10953475-T-A | ** | ||||||||
10965201-C-T | ** | ||||||||
10974961-C-A | ** | ||||||||
13361565-A-C | 11205889-A-C | ** | |||||||
13543660-T-A | 11387984-T-A | ** | |||||||
13435765-C-A | 11280089-C-A | ** | |||||||
14483512-T-A | 12362781-T-A | ** | |||||||
14115005-C-T | 11994299-C-T | ** | |||||||
14255242-A-C | 12134536-A-C | ** | |||||||
14255732-G-A | 12135026-G-A | ** | |||||||
14289606-G-T | 12168900-G-T | ** | |||||||
14383815-C-T | 12263111-C-T | FT221963 | ** | ||||||
14474751-A-G | 12354020-A-G | ** | |||||||
14485399-G-T | 12364668-G-T | ** | |||||||
14068665-C-A | 11947959-C-A | ** | |||||||
14518946-C-T | 12407147-C-T | ** | |||||||
14695602-A-T | 12583668-A-T | ** | |||||||
14715379-T-C | 12603446-T-C | ** | |||||||
14718781-G-T | 12606849-G-T | ** | |||||||
14736059-C-T | 12624127-C-T | ** | |||||||
14741300-C-T | 12629368-C-T | ** | |||||||
14073524-A-G | 11952818-A-G | ** | |||||||
14065604-C-A | 11944898-C-A | ** | |||||||
13487803-GC-G | 11332127-GC-G | ** | |||||||
13595653-A-C | 11439977-A-C | ** | |||||||
13487807-G-GA | 11332131-G-GA | ** | |||||||
13505088-C-A | 11349412-C-A | ** | |||||||
10775734-A-G | ** | ||||||||
13571588-G-T | 11415912-G-T | ** | |||||||
13582982-A-C | 11427306-A-C | ** | |||||||
13595629-C-A | 11439953-C-A | ** | |||||||
13603165-C-A | 11447489-C-A | ** | |||||||
13941049-A-G | 11820343-A-G | ** | |||||||
13643869-C-T | 11488193-C-T | ** | |||||||
11657806-C-A | ** | ||||||||
11673254-A-G | ** | ||||||||
11675140-T-C | ** | ||||||||
13870554-G-A | 11749848-G-A | ** | |||||||
13870560-A-C | 11749854-A-C | ** | |||||||
13940438-C-A | 11819732-C-A | ** | |||||||
10778352-C-A | ** | ||||||||
10668769-C-T | ** | ||||||||
10775726-T-C | ** | ||||||||
6486221-G-T | 6618180-G-T | ** | |||||||
6056988-G-T | 6188947-G-T | ** | |||||||
6332659-A-C | 6464618-A-C | IR3_Dst | 8×AC | ** | |||||
6332660-A-AAATT | 6464619-A-AAATT | IR3_Dst | ** | ||||||
6434506-T-G | 6566465-T-G | ** | |||||||
6459839-C-A | 6591798-C-A | ** | |||||||
6459898-C-A | 6591857-C-A | ** | |||||||
6523725-G-T | 6655684-G-T | ** | |||||||
5937941-G-T | 6069900-G-T | ** | |||||||
6523763-C-A | 6655722-C-A | ** | |||||||
6589077-C-G | 6721036-C-G | ** | |||||||
6600484-C-A | 6732443-C-A | ** | |||||||
6683771-G-T | 6815730-G-T | ** | |||||||
6731310-G-T | 6863269-G-T | ** | |||||||
6778859-C-A | 6910818-C-A | ** | |||||||
5996421-T-C | 6128380-T-C | ** | |||||||
5895230-C-A | 6027189-C-A | ** | |||||||
7043623-G-T | 7175582-G-T | ** | |||||||
5264356-A-G | 5396315-A-G | ** | |||||||
5084164-T-A | 5216123-T-A | ** | |||||||
5107417-G-C | 5239376-G-C | ** | |||||||
5107427-G-T | 5239386-G-T | ** | |||||||
5151855-T-G | 5283814-T-G | ** | |||||||
5190657-C-A | 5322616-C-A | ** | |||||||
5191437-C-A | 5323396-C-A | ** | |||||||
5276946-C-A | 5408905-C-A | ** | |||||||
5782825-C-A | 5914784-C-A | ** | |||||||
5292138-G-A | 5424097-G-A | ** | |||||||
5367522-C-A | 5499481-C-A | ** | |||||||
5539469-G-T | 5671428-G-T | ** | |||||||
5563147-C-A | 5695106-C-A | ** | |||||||
5652707-G-T | 5784666-G-T | ** | |||||||
5711680-C-A | 5843639-C-A | ** | |||||||
6977065-T-C | 7109024-T-C | ** | |||||||
7091072-G-T | 7223031-G-T | ** | |||||||
10766099-C-G | ** | ||||||||
10078180-G-T | 10240571-G-T | ** | |||||||
9499563-G-T | 9661954-G-T | ** | |||||||
9942302-C-A | 10104693-C-A | ** | |||||||
9952013-A-G | 10114404-A-G | ** | |||||||
10003397-C-A | 10165788-C-A | ** | |||||||
10027962-C-A | 10190353-C-A | ** | |||||||
10046207-A-G | 10208598-A-G | ** | |||||||
10078184-G-T | 10240575-G-T | ** | |||||||
9082222-C-T | 9244613-C-T | ** | |||||||
10663462-C-T | ** | ||||||||
10666429-A-G | ** | ||||||||
10668761-C-A | ** | ||||||||
14988889-A-G | 12876955-A-G | ** | |||||||
10668774-T-A | ** | ||||||||
10687889-C-A | ** | ||||||||
9385053-C-G | 9547444-C-G | ** | |||||||
9056130-C-A | ** | ||||||||
7169980-A-C | 7301939-A-C | ** | |||||||
7471431-G-T | 7603390-G-T | IR1_L | ** | ||||||
7204887-T-C | 7336846-T-C | ** | |||||||
7208144-T-C | 7340103-T-C | ** | |||||||
7299118-T-A | 7431077-T-A | ** | |||||||
7360797-T-G | 7492756-T-G | ** | |||||||
7362224-T-C | 7494183-T-C | ** | |||||||
7414039-C-T | 7545998-C-T | ** | |||||||
7534426-G-GTTT | 7666385-G-GTTT | ** | |||||||
8761481-C-T | 8893440-C-T | ** | |||||||
7630889-C-A | 7762848-C-A | ** | |||||||
7935692-CA-C | 8067651-CA-C | ** | |||||||
7969600-CT-C | 8101559-CT-C | ** | |||||||
8072462-T-A | 8204421-T-A | ** | |||||||
8077743-G-T | 8209702-G-T | ** | |||||||
8369628-C-A | 8501587-C-A | ** | |||||||
8679254-G-T | 8811213-G-T | ** | |||||||
14741386-C-A | 12629454-C-A | ** | |||||||
15333873-A-G | 13221991-A-G | ** | |||||||
15049840-C-A | 12937931-C-A | ** | |||||||
22289392-T-G | 20127506-T-G | DYZ19 | ** | ||||||
22123152-C-T | 19961266-C-T | ** | |||||||
22132925-T-G | 19971039-T-G | ** | |||||||
22168304-T-G | 20006418-T-G | ** | |||||||
22172619-C-A | 20010733-C-A | ** | |||||||
22199415-A-C | 20037529-A-C | ** | |||||||
22289390-G-T | 20127504-G-T | DYZ19 | ** | ||||||
22325373-T-C | 20163487-T-C | DYZ19 | ** | ||||||
22091092-T-G | 19929206-T-G | ** | |||||||
22449416-C-A | 20287530-C-A | DYZ19 | ** | ||||||
22483952-T-G | 20322066-T-G | DYZ19 | ** | ||||||
22798109-C-T | 20636223-C-T | ** | |||||||
22809227-C-A | 20647341-C-A | ** | |||||||
22995147-T-C | 20833261-T-C | ** | |||||||
23137266-G-A | 20975380-G-A | ** | |||||||
22114723-G-T | 19952837-G-T | ** | |||||||
21991025-C-A | 19829139-C-A | ** | |||||||
23341793-G-T | 21179907-G-T | ** | |||||||
21276721-G-T | 19114835-G-T | ** | |||||||
20535129-T-C | 18373243-T-C | P5_Dst | ** | ||||||
21042987-G-A | 18881101-G-A | ** | |||||||
21096606-C-CT | 18934720-C-CT | 8×T | ** | ||||||
21207502-A-G | 19045616-A-G | ** | |||||||
21211857-G-T | 19049971-G-T | ** | |||||||
21262597-G-A | 19100711-G-A | ** | |||||||
21297588-G-T | 19135702-G-T | ** | |||||||
21964877-G-A | 19802991-G-A | ** | |||||||
21297636-T-A | 19135750-T-A | ** | |||||||
21408470-T-C | 19246584-T-C | ** | |||||||
21457852-C-A | 19295966-C-A | ** | |||||||
21597041-T-A | 19435155-T-A | ** | |||||||
21602768-T-C | 19440882-T-C | ** | |||||||
21818986-GT-G | 19657100-GT-G | ** | |||||||
21823275-A-G | 19661389-A-G | ** | |||||||
23333794-T-C | 21171908-T-C | ** | |||||||
23401160-T-G | 21239274-T-G | ** | |||||||
20101662-A-G | 17989782-A-G | P5_Dst | ** | ||||||
28730147-G-A | 26584000-G-A | ** | |||||||
28497276-C-A | 26351129-C-A | ** | |||||||
28510013-T-G | 26363866-T-G | ** | |||||||
28513608-C-A | 26367461-C-A | ** | |||||||
28536280-G-T | 26390133-G-T | ** | |||||||
28536347-G-C | 26390200-G-C | ** | |||||||
28700609-T-C | 26554462-T-C | ** | |||||||
28732136-G-T | 26585989-G-T | ** | |||||||
28460723-T-G | 26314576-T-G | ** | |||||||
28742410-C-T | 26596263-C-T | ** | |||||||
28772929-G-A | 26626782-G-A | ** | |||||||
28812139-G-T | 26665992-G-T | ** | |||||||
56838559-G-A | ** | ||||||||
56842082-A-C | ** | ||||||||
56842943-A-T | ** | ||||||||
28465088-T-G | 26318941-T-G | ** | |||||||
27982067-C-A | 25835920-C-A | P1_Y2 | ** | ||||||
23441446-C-A | 21279560-C-A | ** | |||||||
24421015-C-T | 22274868-C-T | ** | |||||||
23491119-C-A | 21329233-C-A | ** | |||||||
23519864-C-A | 21357978-C-A | ** | |||||||
23881906-G-T | 21720020-G-T | ** | |||||||
21753799-A-G | ** | ||||||||
24247414-C-CAA | 22101267-C-CAA | P3_b1 | ** | ||||||
24402244-T-G | 22256097-T-G | ** | |||||||
24421037-G-C | 22274890-G-C | ** | |||||||
27902197-CTTTTTT-C | 25756050-CTTTTTT-C | P1_Y2 | 34×T | ** | |||||
24421046-G-A | 22274899-G-A | ** | |||||||
24421050-T-C | 22274903-T-C | ** | |||||||
24518051-C-A | 22371904-C-A | ** | |||||||
24518364-A-G | 22372217-A-G | ** | |||||||
26146819-C-A | 24000672-C-A | P1_Y1 | ** | ||||||
26212186-GT-G | 24066039-GT-G | P1_Y1 | ** | ||||||
27692861-T-C | 25546714-T-C | P1_Y2 | ** | ||||||
20440337-A-T | 18278451-A-T | P5_Dst | ** | ||||||
19882163-TTTTTTATATA-T | 17770283-TTTTTTATATA-T | P5_Prx | ** | ||||||
15221242-C-A | 13109328-C-A | ** | |||||||
16071162-C-A | 13959282-C-A | ** | |||||||
15971287-G-A | 13859407-G-A | ** | |||||||
15971344-T-C | 13859464-T-C | ** | |||||||
16004773-G-T | 13892893-G-T | ** | |||||||
16047142-C-A | 13935262-C-A | ** | |||||||
16062869-G-T | 13950989-G-T | ** | |||||||
16071137-C-A | 13959257-C-A | ** | |||||||
16079959-C-G | 13968079-C-G | ** | |||||||
15893585-G-T | 13781705-G-T | ** | |||||||
16240942-C-A | 14129062-C-A | ** | |||||||
16279061-C-A | 14167181-C-A | ** | |||||||
16292616-G-A | 14180736-G-A | ** | |||||||
16317955-G-T | 14206075-G-T | ** | |||||||
16340987-C-T | 14229107-C-T | FT81989 | ** | ||||||
16397157-G-A | 14285277-G-A | ** | |||||||
15936815-G-T | 13824935-G-T | ** | |||||||
15790385-C-A | 13678505-C-A | ** | |||||||
16422489-A-C | 14310609-A-C | ** | |||||||
15394757-C-G | 13282877-C-G | ** | |||||||
15287476-A-G | 13175575-A-G | ** | |||||||
15287535-C-T | 13175634-C-T | ** | |||||||
5061086-G-T | 5193045-G-T | ** | |||||||
15365111-C-G | 13253231-C-G | ** | |||||||
15386486-C-A | 13274606-C-A | ** | |||||||
15386489-G-A | 13274609-G-A | ** | |||||||
15396786-C-A | 13284906-C-A | ** | |||||||
15769410-C-T | 13657530-C-T | ** | |||||||
15397066-C-A | 13285186-C-A | ** | |||||||
15400345-C-A | 13288465-C-A | ** | |||||||
15446812-A-G | 13334932-A-G | ** | |||||||
15556745-A-G | 13444865-A-G | ** | |||||||
15729108-G-T | 13617228-G-T | ** | |||||||
15741209-G-T | 13629329-G-T | ** | |||||||
15741222-G-T | 13629342-G-T | ** | |||||||
16411058-G-T | 14299178-G-T | ** | |||||||
16471596-G-T | 14359716-G-T | ** | |||||||
19812751-C-A | 17700871-C-A | P5_Prx | ** | ||||||
18780565-A-G | 16668685-A-G | ** | |||||||
18147577-T-G | 16035697-T-G | ** | |||||||
18184674-C-A | 16072794-C-A | ** | |||||||
18189356-C-A | 16077476-C-A | ** | |||||||
18427763-G-T | 16315883-G-T | P6_Dst | ** | ||||||
18531028-G-T | 16419148-G-T | P6_Dst | ** | ||||||
18654827-GTA-G | 16542947-GTA-G | ** | |||||||
18869791-G-T | 16757911-G-T | ** | |||||||
18042911-C-A | 15931031-C-A | ** | |||||||
19132481-C-A | 17020601-C-A | ** | |||||||
19377165-G-A | 17265285-G-A | ** | |||||||
19464243-C-T | 17352363-C-T | ** | |||||||
19517665-A-G | 17405785-A-G | ** | |||||||
19562532-A-G | 17450652-A-G | ** | |||||||
19801429-T-C | 17689549-T-C | P5_Prx | ** | ||||||
18071781-T-A | 15959901-T-A | ** | |||||||
17916536-A-G | 15804656-A-G | ** | |||||||
16493285-C-A | 14381405-C-A | ** | |||||||
17181921-T-G | 15070041-T-G | ** | |||||||
16616890-G-C | 14505010-G-C | ** | |||||||
16666186-C-A | 14554306-C-A | ** | |||||||
16883468-G-A | 14771588-G-A | ** | |||||||
17066046-G-C | 14954166-G-C | ** | |||||||
17095623-C-T | 14983743-C-T | ** | |||||||
17097496-G-T | 14985616-G-T | ** | |||||||
17247101-C-A | 15135221-C-A | ** | |||||||
17829090-C-A | 15717210-C-A | ** | |||||||
17317733-C-T | 15205853-C-T | ** | |||||||
17317747-C-G | 15205867-C-G | ** | |||||||
17440372-A-C | 15328492-A-C | ** | |||||||
17539449-T-C | 15427569-T-C | FTB17756 | ** | ||||||
17546137-C-A | 15434257-C-A | ** | |||||||
17548471-C-A | 15436591-C-A | ** | |||||||
17548694-G-A | 15436814-G-A | ** | |||||||
5081085-A-C | 5213044-A-C | ** | |||||||
5112831-A-T | 5244790-A-T | ** | |||||||
5031711-G-T | 5163670-G-T | ** | |||||||
16777780-C-A | 14665900-C-A | ** | |||||||
8181239-A-C | 8313198-A-C | ** | |||||||
10807194-T-G | ** | ||||||||
10807182-T-C | ** | ||||||||
10807168-A-C | ** | ||||||||
9440281-C-A | 9602672-C-A | ** | |||||||
22868887-C-A | 20707001-C-A | ** | |||||||
15396358-C-A | 13284478-C-A | ** | |||||||
4769296-C-A | 4901255-C-A | ** | |||||||
24421072-C-T | 22274925-C-T | Z43561 | ** | ||||||
11677001-C-A | ** | ||||||||
2832820-C-A | 2964779-C-A | ** | |||||||
19146597-T-G | 17034717-T-G | ** | |||||||
26060168-C-A | 23914021-C-A | P1_Y1 | 39×A | ** | |||||
10796869-C-A | ** | ||||||||
22017910-G-A | 19856024-G-A | ** | |||||||
13225772-T-C | 11070096-T-C | FT252939 | ** | ||||||
14914712-A-T | 12802779-A-T | ** | |||||||
6694309-T-C | 6826268-T-C | ** | |||||||
23360588-AC-A | 21198702-AC-A | ** | |||||||
7450238-G-T | 7582197-G-T | IR1_L | ** | ||||||
14000514-C-A | 11879808-C-A | FT9100 | ** | ||||||
28531311-C-A | 26385164-C-A | ** | |||||||
4389404-C-CAAA | 4521363-C-CAAA | 21×A | ** | ||||||
2688693-C-T | 2820652-C-T | ** | |||||||
4527951-C-A | 4659910-C-A | ** | |||||||
5711649-C-A | 5843608-C-A | ** | |||||||
27714347-A-G | 25568200-A-G | P1_Y2 | ** | ||||||
19612065-A-T | 17500185-A-T | P5_Prx | ** | ||||||
13234986-C-A | 11079310-C-A | ** | |||||||
10663739-C-A | ** | ||||||||
2699599-C-A | 2831558-C-A | ** | |||||||
10659616-C-T | ** | ||||||||
10989209-C-T | ** | ||||||||
4389383-C-T | 4521342-C-T | ** | |||||||
13612017-A-T | 11456341-A-T | ** | |||||||
9125446-TC-T | ** | ||||||||
21394556-C-A | 19232670-C-A | ** | |||||||
8976406-T-C | 9138797-T-C | ** | |||||||
11003224-C-A | ** | ||||||||
20809606-C-T | 18647720-C-T | P4_Gap | ** | ||||||
5969771-C-A | 6101730-C-A | ** | |||||||
10921246-C-T | ** | ||||||||
2907027-T-A | 3038986-T-A | ** | |||||||
13612011-A-T | 11456335-A-T | ** | |||||||
14531368-AT-A | 12419569-AT-A | ** | |||||||
4527937-C-A | 4659896-C-A | ** | |||||||
10989214-G-A | ** | ||||||||
19356218-C-A | 17244338-C-A | ** | |||||||
11029365-A-C | ** | ||||||||
11016547-C-A | ** | ||||||||
11029424-T-C | ** | ||||||||
11029407-A-C | ** | ||||||||
11029406-C-T | ** | ||||||||
11029392-A-G | ** | ||||||||
5017352-C-A | 5149311-C-A | ** | |||||||
11029385-A-T | ** | ||||||||
11029362-A-T | ** | ||||||||
11029360-T-G | ** | ||||||||
11029341-G-C | ** | ||||||||
16535090-A-G | 14423210-A-G | ** | |||||||
11001997-C-G | ** | ||||||||
11001987-CCATTT-C | ** | ||||||||
11029336-C-A | ** | ||||||||
10848072-C-A | ** | ||||||||
11001999-G-T | ** | ||||||||
14355409-C-A | 12234704-C-A | ** | |||||||
18361485-C-A | 16249605-C-A | P6_Prx | ** | ||||||
10999176-C-A | ** | ||||||||
14422334-C-A | 12301609-C-A | ** | |||||||
17813408-C-A | 15701528-C-A | ** | |||||||
10921453-T-C | ** | ||||||||
59008768-C-CTT | 56862621-C-CTT | 14×T | ** | ||||||
18707782-G-GTA | 16595902-G-GTA | ** | |||||||
15386480-A-T | 13274600-A-T | ** | |||||||
24458777-AAG-A | 22312630-AAG-A | ** | |||||||
15904147-C-T | 13792267-C-T | ** | |||||||
15080781-C-A | 12968871-C-A | ** | |||||||
16246182-AAAC-A | 14134302-AAAC-A | 5×AAC | ** | ||||||
7536337-C-CA | 7668296-C-CA | 28×A | ** | ||||||
5223096-G-T | 5355055-G-T | ** | |||||||
58994926-A-C | 56848779-A-C | ** | |||||||
18297909-A-T | 16186029-A-T | P6_Prx | ** | ||||||
5471854-AAAAG-A | 5603813-AAAAG-A | 5×AAAG | ** | ||||||
5170228-C-A | 5302187-C-A | ** | |||||||
22241625-C-A | 20079739-C-A | DYZ19 | ** | ||||||
6878065-T-C | 7010024-T-C | ** | |||||||
23225335-T-C | 21063449-T-C | CTS11685 | ** | ** | |||||
9943801-A-C | 10106192-A-C | ** | |||||||
17082977-C-CCTTT | 14971097-C-CCTTT | 15×CTTT | ** | ||||||
9943885-A-T | 10106276-A-T | ** | |||||||
13960760-G-T | 11840054-G-T | CTS1550 | ** | ||||||
22668417-C-A | 20506531-C-A | CTS10633 | ** | ||||||
13960728-G-T | 11840022-G-T | CTS1549 | ** | ||||||
13960691-G-A | 11839985-G-A | CTS1548 | ** | ||||||
13960675-A-G | 11839969-A-G | M4664 PF5407 | ** | ||||||
9943805-T-C | 10106196-T-C | ** | |||||||
10688045-C-A | ** | ||||||||
10797946-T-G | ** | ||||||||
19739347-A-AACT | 17627467-A-AACT | P5_Prx | ** | ||||||
10656954-C-A | ** | ||||||||
11002001-T-C | ** | ||||||||
10754954-T-C | ** | ||||||||
10989200-G-T | ** | ||||||||
10977745-C-A | ** | ||||||||
14474834-C-A | 12354103-C-A | ** | |||||||
10845950-G-T | ** | ||||||||
10751150-ACTCC-A | ** | ||||||||
14787806-GTA-G | 12675876-GTA-G | 11×TA | ** | ||||||
10845762-A-G | FT433842 | ** | |||||||
15622613-AG-A | 13510733-AG-A | ** | |||||||
19949610-T-TG | 17837730-T-TG | P5_Prx | ** | ||||||
14097944-TA-T | 11977238-TA-T | ** | |||||||
11029400-G-C | ** | ||||||||
11029380-G-C | ** | ||||||||
6434615-C-A | 6566574-C-A | ** | |||||||
10881008-C-A | ** | ||||||||
4201769-C-A | 4333728-C-A | ** | |||||||
10751135-ATTTCATTCCATTCC-A | ** | ||||||||
10751134-C-T | ** | ||||||||
21912214-C-A | 19750328-C-A | ** | |||||||
23096696-C-T | 20934810-C-T | ** | |||||||
10808972-C-T | ** | ||||||||
10808963-A-C | ** | ||||||||
10808950-C-CTCTTT | ** | ||||||||
24307-C-A | ** | ||||||||
16938194-C-T | 14826314-C-T | ** | |||||||
10688045-C-CACCGG | ** | ||||||||
24421067-G-A | 22274920-G-A | ** | |||||||
10744648-C-A | ** | ||||||||
10683231-TCCAC-T | ** | ||||||||
4900772-G-T | 5032731-G-T | ** | |||||||
11029390-T-C | ** | ||||||||
4138424-G-T | 4270383-G-T | ** | |||||||
15734207-C-A | 13622327-C-A | ** | |||||||
2979061-T-A | 3111020-T-A | ** | |||||||
2974259-C-A | 3106218-C-A | ** | |||||||
2955415-A-G | 3087374-A-G | ** | |||||||
2935876-G-T | 3067835-G-T | ** | |||||||
4452039-C-A | 4583998-C-A | ** | |||||||
2744855-G-T | 2876814-G-T | ** | |||||||
2699624-C-T | 2831583-C-T | ** | |||||||
2699623-A-C | 2831582-A-C | ** | |||||||
7450231-G-T | 7582190-G-T | IR1_L | ** | ||||||
10998519-C-A | ** | ||||||||
15201686-A-C | 13089772-A-C | ** | |||||||
17714918-G-T | 15603038-G-T | ** | |||||||
10801076-C-A | ** | ||||||||
3007866-T-C | 3139825-T-C | ** | |||||||
4475755-G-T | 4607714-G-T | ** | |||||||
56842066-C-A | ** | ||||||||
18991068-C-A | 16879188-C-A | ** | |||||||
10999629-C-A | ** | ||||||||
24421013-G-A | 22274866-G-A | ** | |||||||
4526603-C-A | 4658562-C-A | ** | |||||||
4380213-A-T | 4512172-A-T | ** | |||||||
56846922-G-T | ** | ||||||||
7996876-C-A | 8128835-C-A | ** | |||||||
24421069-G-A | 22274922-G-A | ** | |||||||
19411740-C-A | 17299860-C-A | ** | |||||||
4553949-T-G | 4685908-T-G | ** | |||||||
3007733-C-A | 3139692-C-A | ** | |||||||
3015807-A-G | 3147766-A-G | ** | |||||||
13234448-C-A | 11078772-C-A | ** | |||||||
4426820-C-A | 4558779-C-A | ** | |||||||
4257514-G-A | 4389473-G-A | ** | |||||||
4244384-C-A | 4376343-C-A | ** | |||||||
4387079-C-A | 4519038-C-A | ** | |||||||
4215830-G-T | 4347789-G-T | ** | |||||||
4130664-G-T | 4262623-G-T | ** | |||||||
4121820-C-A | 4253779-C-A | ** | |||||||
4093185-G-T | 4225144-G-T | ** | |||||||
3916512-G-A | 4048471-G-A | ** | |||||||
3884384-T-C | 4016343-T-C | ** | |||||||
3883776-G-T | 4015735-G-T | ** | |||||||
3875975-TC-T | 4007934-TC-T | ** | |||||||
3830797-A-C | 3962756-A-C | ** | |||||||
3801718-G-A | 3933677-G-A | ** | |||||||
3103492-G-T | 3235451-G-T | ** | |||||||
3750718-C-A | 3882677-C-A | ** | |||||||
4438481-T-C | 4570440-T-C | ** | |||||||
3680384-A-T | 3812343-A-T | ** | |||||||
3662862-C-A | 3794821-C-A | ** | |||||||
3638738-G-T | 3770697-G-T | ** | |||||||
3635216-T-C | 3767175-T-C | FT317969 | ** | ||||||
3605322-AAAAT-A | 3737281-AAAAT-A | 4×AAAT | ** | ||||||
3427769-G-T | 3559728-G-T | ** | |||||||
3404434-C-A | 3536393-C-A | ** | |||||||
3328460-C-A | 3460419-C-A | ** | |||||||
4441123-T-C | 4573082-T-C | ** | |||||||
3267769-T-C | 3399728-T-C | ** | |||||||
3195728-C-T | 3327687-C-T | ** | |||||||
3835036-C-A | 3966995-C-A | ** | |||||||
10943386-C-A | ** | ||||||||
20440397-T-TGTA | 18278511-T-TGTA | P5_Dst | ** | ||||||
21912157-C-A | 19750271-C-A | ** | |||||||
15113497-C-A | 13001584-C-A | ** | |||||||
4740980-G-C | 4872939-G-C | ** | |||||||
10929564-C-A | ** | ||||||||
21391590-TAA-T | 19229704-TAA-T | 12×A | ** | ||||||
27916338-C-A | 25770191-C-A | P1_Y2 | ** | ||||||
15671169-A-T | 13559289-A-T | ** | |||||||
7224118-C-A | 7356077-C-A | ** | |||||||
28700847-C-A | 26554700-C-A | ** | |||||||
11026234-C-A | ** | ||||||||
22951246-C-A | 20789360-C-A | ** | |||||||
24421056-C-T | 22274909-C-T | ** | |||||||
10754575-C-A | ** | ||||||||
56848906-G-A | ** | ||||||||
10921233-C-T | ** | ||||||||
16526619-C-A | 14414739-C-A | FTB11331 | ** | ||||||
17380632-C-A | 15268752-C-A | ** | |||||||
13487810-G-T | 11332134-G-T | ** | |||||||
10782738-C-A | ** | ||||||||
4897834-G-T | 5029793-G-T | ** | |||||||
10839107-C-A | ** | ||||||||
15201682-G-A | 13089768-G-A | ** | |||||||
15201681-T-C | 13089767-T-C | ** | |||||||
15276760-C-A | 13164849-C-A | ** | |||||||
13612020-G-T | 11456344-G-T | ** | |||||||
7536337-C-A | 7668296-C-A | 28×A | ** | ||||||
10029318-C-A | 10191709-C-A | ** | |||||||
10663814-T-G | ** | ||||||||
4709715-C-A | 4841674-C-A | ** | |||||||
15173543-G-T | 13061629-G-T | ** | |||||||
4271360-C-A | 4403319-C-A | ** | |||||||
9440435-C-A | 9602826-C-A | ** | |||||||
24512378-C-A | 22366231-C-A | ** | |||||||
4654034-C-A | 4785993-C-A | ** | |||||||
10667776-G-T | ** | ||||||||
4970094-G-T | 5102053-G-T | ** | |||||||
13323483-C-A | 11167807-C-A | ** | |||||||
4654090-C-A | 4786049-C-A | ** | |||||||
17860728-G-T | 15748848-G-T | ** | |||||||
13544895-C-A | 11389219-C-A | ** | |||||||
16232463-C-A | 14120583-C-A | ** | |||||||
10977053-C-A | ** | ||||||||
4654396-C-A | 4786355-C-A | ** | |||||||
4444900-G-T | 4576859-G-T | ** | |||||||
24405134-C-A | 22258987-C-A | ** | |||||||
15201721-C-A | 13089807-C-A | ** | |||||||
15309708-T-C | 13197812-T-C | ** | |||||||
26400777-A-T | 24254630-A-T | P1_Y1 | ** | ||||||
15432810-A-G | 13320930-A-G | ** | |||||||
10024678-T-C | 10187069-T-C | *** | |||||||
13143784-GCACTGCACAT-CCACTCCACTC,G | 10633270-GCACTGCACAT-CCACTCCACTC,G | *** | |||||||
13863357-C-G | 11742651-C-G | *** | |||||||
13461157-T-A | 11305481-T-A | *** | |||||||
13863371-C-G | 11742665-C-G | *** | |||||||
10007830-T-C | 10170221-T-C | *** | |||||||
13857791-G-T | 11737085-G-T | *** | |||||||
3640830-CTCCTTCCT-C | 3772789-CTCCTTCCT-C | 12×TCCT | *** | ||||||
22345462-G-A | 20183576-G-A | DYZ19 | *** | ||||||
56830208-C-CACTCCACTCA | *** | ||||||||
16050996-C-CTCTTTCTT | 13939116-C-CTCTTTCTT | 16×TCTT | *** | ||||||
13674764-T-A | 11519088-T-A | *** | |||||||
25040658-A-C | 22894511-A-C | g1 | *** | ||||||
10024652-GTCTGTC-G | 10187043-GTCTGTC-G | *** | |||||||
13846999-G-C | 11726293-G-C | *** | |||||||
26187230-T-TA | 24041083-T-TA | P1_Y1 | 8×A | *** | |||||
13809655-T-C | 11688949-T-C | *** | |||||||
13803034-AATGGACTGCAG-A | 11682328-AATGGACTGCAG-A | *** | |||||||
28815131-G-A | 26668984-G-A | *** | |||||||
13437739-C-G | 11282063-C-G | *** | |||||||
13437713-C-T | 11282037-C-T | *** | |||||||
13800503-A-G | 11679797-A-G | *** | |||||||
19520866-AG-A | 17408986-AG-A | *** | |||||||
22276658-G-T | 20114772-G-T | DYZ19 | *** | ||||||
13810069-G-A | 11689363-G-A | *** | |||||||
13663123-G-A | 11507447-G-A | *** | |||||||
13826709-C-A | 11706003-C-A | *** | |||||||
8160178-CAA-C,CA | 8292137-CAA-C,CA | 20×A | *** | ||||||
6878800-A-C | 7010759-A-C | M5386 | *** | ||||||
23433555-AT-A,ATT | 21271669-AT-A,ATT | 13×T | *** | ||||||
8799546-C-A | 8931505-C-A | *** | |||||||
16424302-G-A | 14312422-G-A | *** | |||||||
10769428-T-C | *** | ||||||||
10818801-C-T | *** | ||||||||
10662843-C-A | *** | ||||||||
10962950-T-A | *** | ||||||||
15741845-G-C | 13629965-G-C | *** | |||||||
10921529-C-G,T | *** | ||||||||
15034680-C-A | 12922768-C-A | *** | |||||||
17576087-C-A | 15464207-C-A | *** | |||||||
10986335-G-A | *** | ||||||||
11018848-AC-A | *** | ||||||||
22996012-CAA-C,CA | 20834126-CAA-C,CA | 18×A | *** | ||||||
10800417-C-A | *** | ||||||||
13293687-C-A | 11138011-C-A | *** | |||||||
6752685-C-A | 6884644-C-A | *** | |||||||
13488730-A-C | 11333054-A-C | *** | |||||||
21200894-CAAA-C,CAA | 19039008-CAAA-C,CAA | 14×A | *** | ||||||
15538026-GA-G | 13426146-GA-G | 9×A | *** | ||||||
10032885-C-A | 10195276-C-A | *** | |||||||
21425538-TA-T | 19263652-TA-T | 10×A | *** | ||||||
2833232-C-A | 2965191-C-A | *** | |||||||
6124410-C-A | 6256369-C-A | *** | |||||||
8760517-CTTTTTTT-C | 8892476-CTTTTTTT-C | 20×T | *** | ||||||
21934980-ATTT-A,AT | 19773094-ATTT-A,AT | 17×T | *** | ||||||
10807279-C-T | *** | ||||||||
6778779-C-T | 6910738-C-T | *** | |||||||
7374798-C-A | 7506757-C-A | *** | |||||||
19754872-C-A | 17642992-C-A | P5_Prx | *** | ||||||
19463444-C-A | 17351564-C-A | *** | |||||||
2803668-G-A | 2935627-G-A | *** | |||||||
17319945-AAGGG-A,AAGAAAGAAAGAAAGGG | 15208065-AAGGG-A,AAGAAAGAAAGAAAGGG | *** | |||||||
13470546-G-T | 11314870-G-T | *** | |||||||
11657547-C-A | *** | ||||||||
18108640-G-T | 15996760-G-T | *** | |||||||
10655879-C-A | *** | ||||||||
2706841-G-GAA | 2838800-G-GAA | 16×A | *** | ||||||
11033840-CTGCTCCATTC-C,CCACTGCATTA | *** | ||||||||
11033818-A-C,T | *** | ||||||||
19231319-CTT-C,CTTTT | 17119439-CTT-C,CTTTT | 24×T | *** | ||||||
9966417-G-T | 10128808-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 244292 | 10928503 | 7953874 | 8046688 |
Kit: 244292 | 10061893 | 8130313 | 7983177 |
Used in age calculations | 10928503 | 8130313 | 8046688 |
Counts of SNPs | 4 | 3 |
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