Blakeley
BigY3: 278765, BigY2: 278765Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 278765 | BigY2 278765 |
|---|---|---|---|---|---|---|---|---|
| hg19:Y:5995474-T-A hg38:Y:6127433-T-A | A* | |||||||
| hg19:Y:18496907-G-GT hg38:Y:16385027-G-GT | P6_Dst | 8×T | A* | |||||
| hg19:Y:27633359-A-C hg38:Y:25487212-A-C | P1_Y2 | A* | ||||||
| hg19:Y:28816746-T-G hg38:Y:26670599-T-G | A* | |||||||
| hg19:Y:16132576-A-C hg38:Y:14020696-A-C | A19611 | P8_Spc | + | + | ||||
| hg19:Y:16474264-G-A hg38:Y:14362384-G-A | A19612 | Y | Y | + | + | |||
| hg19:Y:13451841-TTTA-GTAG,TTGA hg38:Y:11296165-TTTA-GTAG,TTGA | * | |||||||
| hg19:Y:13447499-C-T hg38:Y:11291823-C-T | * | |||||||
| hg19:Y:17945119-C-A hg38:Y:15833239-C-A | Z17693 | Z17693 BY60 A494 FGC17433 | ** | |||||
| hg19:Y:20692965-CAA-C hg38:Y:18531079-CAA-C | P4_Prx | 19×A | ** | |||||
| hg19:Y:23260612-T-TTA hg38:Y:21098726-T-TTA | 8×TA | ** | ||||||
| hg19:Y:22549944-C-A hg38:Y:20388058-C-A | BY22100 | ** | ||||||
| hg19:Y:7453566-A-AGT hg38:Y:7585525-A-AGT | IR1_L | 16×GT | ** | |||||
| hg19:Y:13489475-T-G hg38:Y:11333799-T-G | ** | |||||||
| hg19:Y:13476233-C-A hg38:Y:11320557-C-A | ** | |||||||
| hg38:Y:10768084-T-C | ** | |||||||
| hg19:Y:15115634-C-A hg38:Y:13003721-C-A | ** | |||||||
| hg38:Y:10768670-T-C | ** | |||||||
| hg38:Y:10759847-T-A | ** | |||||||
| hg19:Y:28814892-T-A hg38:Y:26668745-T-A | ** | |||||||
| hg19:Y:28814901-G-T hg38:Y:26668754-G-T | ** | |||||||
| hg19:Y:28814903-G-A hg38:Y:26668756-G-A | ** | |||||||
| hg19:Y:15503468-C-A hg38:Y:13391588-C-A | ** | |||||||
| hg19:Y:15952403-C-A hg38:Y:13840523-C-A | ** | |||||||
| hg38:Y:10900035-A-G | ** | |||||||
| hg38:Y:10900046-T-C | ** | |||||||
| hg19:Y:4503077-G-T hg38:Y:4635036-G-T | ** | |||||||
| hg19:Y:19202928-CAAA-C hg38:Y:17091048-CAAA-C | 25×A | ** | ||||||
| hg19:Y:18668046-C-A hg38:Y:16556166-C-A | ** | |||||||
| hg19:Y:6972677-T-G hg38:Y:7104636-T-G | ** | |||||||
| hg19:Y:19078496-C-A hg38:Y:16966616-C-A | ** | |||||||
| hg19:Y:16581801-C-A hg38:Y:14469921-C-A | ** | |||||||
| hg19:Y:13593609-C-A hg38:Y:11437933-C-A | ** | |||||||
| hg38:Y:10796879-T-C | ** | |||||||
| hg38:Y:10796884-C-T | ** | |||||||
| hg19:Y:28793057-A-T hg38:Y:26646910-A-T | BY151435 | ** | ||||||
| hg19:Y:6513468-C-A hg38:Y:6645427-C-A | ** | |||||||
| hg19:Y:24378413-C-A hg38:Y:22232266-C-A | ** | |||||||
| hg19:Y:6310849-A-T hg38:Y:6442808-A-T | IR3_Dst | ** | ||||||
| hg38:Y:10689145-C-T | ** | |||||||
| hg38:Y:10845748-T-C | ** | |||||||
| hg19:Y:7246113-C-A hg38:Y:7378072-C-A | ** | |||||||
| hg19:Y:7099824-C-A hg38:Y:7231783-C-A | ** | |||||||
| hg38:Y:10845743-T-C | ** | |||||||
| hg19:Y:15677014-C-A hg38:Y:13565134-C-A | FGC991 | ** | ||||||
| hg19:Y:8119176-C-A hg38:Y:8251135-C-A | ** | |||||||
| hg19:Y:15604611-C-A hg38:Y:13492731-C-A | ** | |||||||
| hg19:Y:13485608-G-T hg38:Y:11329932-G-T | ** | |||||||
| hg19:Y:14985131-C-A hg38:Y:12873199-C-A | ** | |||||||
| hg19:Y:4969364-C-A hg38:Y:5101323-C-A | ** | |||||||
| hg19:Y:18085368-C-A hg38:Y:15973488-C-A | ** | |||||||
| hg19:Y:15221795-C-A hg38:Y:13109881-C-A | ** | |||||||
| hg19:Y:7261241-A-T hg38:Y:7393200-A-T | ** | |||||||
| hg19:Y:10023384-C-A hg38:Y:10185775-C-A | ** | |||||||
| hg19:Y:21468955-C-A hg38:Y:19307069-C-A | ** | |||||||
| hg38:Y:10978864-A-G | ** | |||||||
| hg19:Y:27546764-G-T hg38:Y:25400617-G-T | P1_Y2 | ** | ||||||
| hg19:Y:15619842-C-A hg38:Y:13507962-C-A | ** | |||||||
| hg19:Y:17167980-C-A hg38:Y:15056100-C-A | ** | |||||||
| hg38:Y:10978883-ACACGT-A | ** | |||||||
| hg38:Y:10978928-C-T | ** | |||||||
| hg19:Y:2684636-T-G hg38:Y:2816595-T-G | ** | |||||||
| hg19:Y:2730059-C-A hg38:Y:2862018-C-A | ** | |||||||
| hg19:Y:2850946-C-A hg38:Y:2982905-C-A | ** | |||||||
| hg19:Y:3016249-C-A hg38:Y:3148208-C-A | ** | |||||||
| hg19:Y:3192666-C-A hg38:Y:3324625-C-A | ** | |||||||
| hg19:Y:3230986-C-A hg38:Y:3362945-C-A | ** | |||||||
| hg19:Y:3248074-G-T hg38:Y:3380033-G-T | ** | |||||||
| hg19:Y:3429387-C-G hg38:Y:3561346-C-G | ** | |||||||
| hg19:Y:3575657-C-A hg38:Y:3707616-C-A | ** | |||||||
| hg19:Y:3591305-C-A hg38:Y:3723264-C-A | ** | |||||||
| hg19:Y:3655396-G-T hg38:Y:3787355-G-T | ** | |||||||
| hg19:Y:3853581-C-CT hg38:Y:3985540-C-CT | 8×T | ** | ||||||
| hg19:Y:3960222-T-G hg38:Y:4092181-T-G | ** | |||||||
| hg19:Y:3994873-C-A hg38:Y:4126832-C-A | ** | |||||||
| hg19:Y:4065424-A-T hg38:Y:4197383-A-T | ** | |||||||
| hg19:Y:4229992-C-A hg38:Y:4361951-C-A | ** | |||||||
| hg19:Y:4388615-G-T hg38:Y:4520574-G-T | ** | |||||||
| hg19:Y:4416975-C-A hg38:Y:4548934-C-A | ** | |||||||
| hg19:Y:4671600-T-G hg38:Y:4803559-T-G | ** | |||||||
| hg19:Y:4839022-G-A hg38:Y:4970981-G-A | ** | |||||||
| hg19:Y:5176990-G-T hg38:Y:5308949-G-T | ** | |||||||
| hg19:Y:5447005-C-A hg38:Y:5578964-C-A | ** | |||||||
| hg19:Y:5534819-C-A hg38:Y:5666778-C-A | ** | |||||||
| hg19:Y:5753946-G-T hg38:Y:5885905-G-T | ** | |||||||
| hg19:Y:5937226-C-A hg38:Y:6069185-C-A | ** | |||||||
| hg19:Y:6028461-C-G hg38:Y:6160420-C-G | ** | |||||||
| hg19:Y:6363489-T-C hg38:Y:6495448-T-C | ** | |||||||
| hg19:Y:6449260-G-T hg38:Y:6581219-G-T | ** | |||||||
| hg19:Y:6634150-C-A hg38:Y:6766109-C-A | ** | |||||||
| hg19:Y:6663262-C-A hg38:Y:6795221-C-A | FGC34784 | ** | ||||||
| hg19:Y:6724525-G-T hg38:Y:6856484-G-T | ** | |||||||
| hg19:Y:6759304-C-A hg38:Y:6891263-C-A | ** | |||||||
| hg19:Y:6917837-C-A hg38:Y:7049796-C-A | ** | |||||||
| hg19:Y:6979746-C-A hg38:Y:7111705-C-A | ** | |||||||
| hg19:Y:6998041-A-T hg38:Y:7130000-A-T | ** | |||||||
| hg19:Y:7028329-C-A hg38:Y:7160288-C-A | ** | |||||||
| hg19:Y:7103342-C-A hg38:Y:7235301-C-A | ** | |||||||
| hg19:Y:7152728-T-G hg38:Y:7284687-T-G | ** | |||||||
| hg19:Y:7187757-AT-A hg38:Y:7319716-AT-A | ** | |||||||
| hg19:Y:7211205-T-G hg38:Y:7343164-T-G | ** | |||||||
| hg19:Y:7224247-C-A hg38:Y:7356206-C-A | ** | |||||||
| hg19:Y:7229187-A-T hg38:Y:7361146-A-T | ** | |||||||
| hg19:Y:7257915-C-A hg38:Y:7389874-C-A | ** | |||||||
| hg19:Y:7312007-C-A hg38:Y:7443966-C-A | ** | |||||||
| hg19:Y:7390060-G-A hg38:Y:7522019-G-A | ** | |||||||
| hg19:Y:7392376-G-A hg38:Y:7524335-G-A | ** | |||||||
| hg19:Y:7468041-C-A hg38:Y:7600000-C-A | IR1_L | ** | ||||||
| hg19:Y:7513220-C-A hg38:Y:7645179-C-A | ** | |||||||
| hg19:Y:7537964-C-A hg38:Y:7669923-C-A | ** | |||||||
| hg19:Y:7721256-C-A hg38:Y:7853215-C-A | ** | |||||||
| hg19:Y:7853217-G-T hg38:Y:7985176-G-T | Y35552 | ** | ||||||
| hg19:Y:7863794-C-A hg38:Y:7995753-C-A | ** | |||||||
| hg19:Y:7898722-T-G hg38:Y:8030681-T-G | ** | |||||||
| hg19:Y:7976123-T-G hg38:Y:8108082-T-G | ** | |||||||
| hg19:Y:8036282-G-T hg38:Y:8168241-G-T | ** | |||||||
| hg19:Y:8075808-T-A hg38:Y:8207767-T-A | ** | |||||||
| hg19:Y:8142826-C-A hg38:Y:8274785-C-A | ** | |||||||
| hg19:Y:8342842-TA-T hg38:Y:8474801-TA-T | 10×A | ** | ||||||
| hg19:Y:8399151-C-G hg38:Y:8531110-C-G | ** | |||||||
| hg19:Y:8578118-ATTAT-A hg38:Y:8710077-ATTAT-A | 4×TTAT | ** | ||||||
| hg19:Y:8665787-T-G hg38:Y:8797746-T-G | ** | |||||||
| hg19:Y:8811085-C-A hg38:Y:8943044-C-A | ** | |||||||
| hg19:Y:9087295-C-A hg38:Y:9249686-C-A | ** | |||||||
| hg19:Y:9365105-T-A hg38:Y:9527496-T-A | ** | |||||||
| hg19:Y:9403103-C-A hg38:Y:9565494-C-A | ** | |||||||
| hg19:Y:9457339-C-A hg38:Y:9619730-C-A | ** | |||||||
| hg19:Y:9461815-C-A hg38:Y:9624206-C-A | ** | |||||||
| hg19:Y:9730534-G-T hg38:Y:9892925-G-T | IR3_Prx | ** | ||||||
| hg19:Y:9742586-C-CTT hg38:Y:9904977-C-CTT | IR3_Prx | 13×T | ** | |||||
| hg19:Y:9852992-G-A hg38:Y:10015383-G-A | ** | |||||||
| hg19:Y:9966140-C-T hg38:Y:10128531-C-T | ** | |||||||
| hg19:Y:9984245-C-A hg38:Y:10146636-C-A | ** | |||||||
| hg19:Y:9995068-C-A hg38:Y:10157459-C-A | FT373907 | ** | ||||||
| hg19:Y:10018262-C-A hg38:Y:10180653-C-A | ** | |||||||
| hg19:Y:10020566-C-A hg38:Y:10182957-C-A | ** | |||||||
| hg19:Y:10037878-C-A hg38:Y:10200269-C-A | ** | |||||||
| hg38:Y:10655796-C-A | ** | |||||||
| hg38:Y:10661543-C-A | ** | |||||||
| hg38:Y:10668634-T-TCGAGATGAAC | ** | |||||||
| hg38:Y:10686713-C-A | ** | |||||||
| hg38:Y:10690429-A-C | ** | |||||||
| hg38:Y:10744364-G-A | ** | |||||||
| hg38:Y:10762549-C-T | ** | |||||||
| hg38:Y:10762554-T-C | ** | |||||||
| hg38:Y:10762555-A-T | ** | |||||||
| hg38:Y:10762556-C-T | ** | |||||||
| hg38:Y:10762568-C-T | ** | |||||||
| hg38:Y:10766484-T-C | ** | |||||||
| hg38:Y:10766522-C-A | ** | |||||||
| hg38:Y:10766524-T-C | ** | |||||||
| hg38:Y:10766534-T-C | ** | |||||||
| hg38:Y:10766544-T-C | ** | |||||||
| hg38:Y:10768110-C-T | ** | |||||||
| hg38:Y:10768119-T-C | ** | |||||||
| hg38:Y:10768710-C-A | ** | |||||||
| hg38:Y:10799293-C-A | ** | |||||||
| hg38:Y:10799825-G-T | ** | |||||||
| hg38:Y:10804638-C-A | ** | |||||||
| hg38:Y:10823882-C-A | ** | |||||||
| hg38:Y:10833551-C-T | ** | |||||||
| hg38:Y:10843653-T-C | ** | |||||||
| hg38:Y:10845654-T-A | ** | |||||||
| hg38:Y:10845659-T-A | ** | |||||||
| hg38:Y:10851875-C-A | ** | |||||||
| hg38:Y:10852095-T-G | ** | |||||||
| hg38:Y:10868621-C-A | ** | |||||||
| hg38:Y:10873487-C-A | ** | |||||||
| hg38:Y:10873552-C-A | ** | |||||||
| hg38:Y:10885855-C-A | ** | |||||||
| hg38:Y:10894578-T-C | ** | |||||||
| hg38:Y:10894582-A-T | ** | |||||||
| hg38:Y:10894583-T-C | ** | |||||||
| hg38:Y:10895137-G-T | ** | |||||||
| hg38:Y:10900034-A-C | ** | |||||||
| hg38:Y:10900040-G-C | ** | |||||||
| hg38:Y:10911997-A-T | ** | |||||||
| hg38:Y:10978863-C-T | ** | |||||||
| hg38:Y:10978865-T-C | ** | |||||||
| hg38:Y:10978879-C-A | ** | |||||||
| hg38:Y:10978882-C-T | ** | |||||||
| hg38:Y:10978895-TCAC-T | ** | |||||||
| hg38:Y:10978923-G-C | ** | |||||||
| hg38:Y:10978949-CTCCCC-T | ** | |||||||
| hg38:Y:10995848-CCACTT-C | ** | |||||||
| hg38:Y:10998148-C-A | ** | |||||||
| hg38:Y:10998201-C-A | ** | |||||||
| hg38:Y:11008878-C-A | ** | |||||||
| hg38:Y:11009747-TC-T | ** | |||||||
| hg38:Y:11017673-C-A | ** | |||||||
| hg38:Y:11018257-C-A | ** | |||||||
| hg38:Y:11019873-C-A | ** | |||||||
| hg38:Y:11019895-C-A | ** | |||||||
| hg38:Y:11020837-A-C | ** | |||||||
| hg38:Y:11024982-C-A | ** | |||||||
| hg38:Y:11035638-A-C | ** | |||||||
| hg38:Y:11035645-A-T | ** | |||||||
| hg38:Y:11035658-C-G | ** | |||||||
| hg19:Y:13195941-T-C hg38:Y:11040265-T-C | ** | |||||||
| hg19:Y:13215557-C-A hg38:Y:11059881-C-A | ** | |||||||
| hg19:Y:13319084-C-A hg38:Y:11163408-C-A | ** | |||||||
| hg19:Y:13350059-C-A hg38:Y:11194383-C-A | ** | |||||||
| hg19:Y:13468147-G-T hg38:Y:11312471-G-T | ** | |||||||
| hg19:Y:13476255-C-A hg38:Y:11320579-C-A | ** | |||||||
| hg19:Y:13478190-C-A hg38:Y:11322514-C-A | ** | |||||||
| hg19:Y:13620404-C-A hg38:Y:11464728-C-A | ** | |||||||
| hg19:Y:13705398-A-C hg38:Y:11549722-A-C | DYZ17 | ** | ||||||
| hg19:Y:13850581-G-T hg38:Y:11729875-G-T | DYZ17 | ** | ||||||
| hg19:Y:13896411-C-A hg38:Y:11775705-C-A | ** | |||||||
| hg19:Y:13899469-C-A hg38:Y:11778763-C-A | ** | |||||||
| hg19:Y:14048735-C-A hg38:Y:11928029-C-A | ** | |||||||
| hg19:Y:14067387-C-A hg38:Y:11946681-C-A | ** | |||||||
| hg19:Y:14184742-G-T hg38:Y:12064036-G-T | ** | |||||||
| hg19:Y:14213276-G-T hg38:Y:12092570-G-T | ** | |||||||
| hg19:Y:14213278-C-A hg38:Y:12092572-C-A | ** | |||||||
| hg19:Y:14231956-C-A hg38:Y:12111250-C-A | ** | |||||||
| hg19:Y:14286879-T-C hg38:Y:12166173-T-C | ** | |||||||
| hg19:Y:14308274-C-A hg38:Y:12187568-C-A | ** | |||||||
| hg19:Y:14316506-C-A hg38:Y:12195800-C-A | ** | |||||||
| hg19:Y:14371453-A-T hg38:Y:12250749-A-T | ** | |||||||
| hg19:Y:14398158-C-A hg38:Y:12277454-C-A | ** | |||||||
| hg19:Y:14404774-C-A hg38:Y:12284071-C-A | ** | |||||||
| hg19:Y:14431625-G-C hg38:Y:12310898-G-C | ** | |||||||
| hg19:Y:14445220-G-A hg38:Y:12324493-G-A | ** | |||||||
| hg19:Y:14445219-AG-A hg38:Y:12324492-AG-A | ** | |||||||
| hg19:Y:14486064-T-A hg38:Y:12365333-T-A | ** | |||||||
| hg19:Y:14502709-C-A hg38:Y:12390914-C-A | ** | |||||||
| hg19:Y:14622248-C-A hg38:Y:12510446-C-A | ** | |||||||
| hg19:Y:14658317-C-A hg38:Y:12546382-C-A | ** | |||||||
| hg19:Y:14722435-C-A hg38:Y:12610503-C-A | ** | |||||||
| hg19:Y:14904059-A-C hg38:Y:12792126-A-C | ** | |||||||
| hg19:Y:14909736-C-A hg38:Y:12797803-C-A | ** | |||||||
| hg19:Y:14981998-C-T hg38:Y:12870066-C-T | ** | |||||||
| hg19:Y:15034914-T-A hg38:Y:12923002-T-A | ** | |||||||
| hg19:Y:15193395-C-A hg38:Y:13081481-C-A | ** | |||||||
| hg19:Y:15289990-T-G hg38:Y:13178089-T-G | ** | |||||||
| hg19:Y:15439011-A-G hg38:Y:13327131-A-G | ** | |||||||
| hg19:Y:15489910-C-A hg38:Y:13378030-C-A | ** | |||||||
| hg19:Y:15584918-C-A hg38:Y:13473038-C-A | ** | |||||||
| hg19:Y:15589657-C-A hg38:Y:13477777-C-A | ** | |||||||
| hg19:Y:15641968-T-A hg38:Y:13530088-T-A | ** | |||||||
| hg19:Y:15690736-A-T hg38:Y:13578856-A-T | ** | |||||||
| hg19:Y:15831679-T-C hg38:Y:13719799-T-C | ** | |||||||
| hg19:Y:15921350-C-A hg38:Y:13809470-C-A | ** | |||||||
| hg19:Y:16032320-C-A hg38:Y:13920440-C-A | ** | |||||||
| hg19:Y:16038188-A-G hg38:Y:13926308-A-G | ** | |||||||
| hg19:Y:16054295-C-A hg38:Y:13942415-C-A | ** | |||||||
| hg19:Y:16076930-T-G hg38:Y:13965050-T-G | ** | |||||||
| hg19:Y:16354945-T-G hg38:Y:14243065-T-G | ** | |||||||
| hg19:Y:16354986-T-G hg38:Y:14243106-T-G | ** | |||||||
| hg19:Y:16424575-C-A hg38:Y:14312695-C-A | ** | |||||||
| hg19:Y:16488146-C-A hg38:Y:14376266-C-A | ** | |||||||
| hg19:Y:16631565-C-A hg38:Y:14519685-C-A | ** | |||||||
| hg19:Y:16678490-C-A hg38:Y:14566610-C-A | ** | |||||||
| hg19:Y:17004392-C-A hg38:Y:14892512-C-A | FTB82034 | ** | ||||||
| hg19:Y:17032585-C-A hg38:Y:14920705-C-A | ** | |||||||
| hg19:Y:17092525-C-A hg38:Y:14980645-C-A | ** | |||||||
| hg19:Y:17181499-A-G hg38:Y:15069619-A-G | ** | |||||||
| hg19:Y:17278019-C-A hg38:Y:15166139-C-A | ** | |||||||
| hg19:Y:17310851-C-A hg38:Y:15198971-C-A | ** | |||||||
| hg19:Y:17355959-C-A hg38:Y:15244079-C-A | ** | |||||||
| hg19:Y:17486314-G-T hg38:Y:15374434-G-T | ** | |||||||
| hg19:Y:17815341-C-A hg38:Y:15703461-C-A | ** | |||||||
| hg19:Y:17927942-C-A hg38:Y:15816062-C-A | ** | |||||||
| hg19:Y:17940182-C-A hg38:Y:15828302-C-A | ** | |||||||
| hg19:Y:17969107-G-A hg38:Y:15857227-G-A | ** | |||||||
| hg19:Y:18014688-A-C hg38:Y:15902808-A-C | P7_Dst | ** | ||||||
| hg19:Y:18131550-G-T hg38:Y:16019670-G-T | ** | |||||||
| hg19:Y:18138173-A-C hg38:Y:16026293-A-C | ** | |||||||
| hg19:Y:18138368-G-T hg38:Y:16026488-G-T | ** | |||||||
| hg19:Y:18246458-G-T hg38:Y:16134578-G-T | ** | |||||||
| hg19:Y:18317643-G-C hg38:Y:16205763-G-C | P6_Prx | ** | ||||||
| hg19:Y:18370751-G-T hg38:Y:16258871-G-T | P6_Prx | ** | ||||||
| hg19:Y:18382624-T-C hg38:Y:16270744-T-C | P6_Gap | ** | ||||||
| hg19:Y:18425168-A-C hg38:Y:16313288-A-C | P6_Gap | ** | ||||||
| hg19:Y:18847770-T-C hg38:Y:16735890-T-C | ** | |||||||
| hg19:Y:18859086-C-A hg38:Y:16747206-C-A | ** | |||||||
| hg19:Y:18869058-C-A hg38:Y:16757178-C-A | ** | |||||||
| hg19:Y:18900240-C-A hg38:Y:16788360-C-A | ** | |||||||
| hg19:Y:18933695-A-T hg38:Y:16821815-A-T | ** | |||||||
| hg19:Y:19051997-G-C hg38:Y:16940117-G-C | ** | |||||||
| hg19:Y:19444771-C-A hg38:Y:17332891-C-A | ** | |||||||
| hg19:Y:19546201-C-A hg38:Y:17434321-C-A | ** | |||||||
| hg19:Y:20052714-G-A hg38:Y:17940834-G-A | P5_Prx | ** | ||||||
| hg19:Y:20447312-G-T hg38:Y:18285426-G-T | P5_Dst | ** | ||||||
| hg19:Y:20447315-A-T hg38:Y:18285429-A-T | P5_Dst | ** | ||||||
| hg19:Y:21091552-C-A hg38:Y:18929666-C-A | ** | |||||||
| hg19:Y:21102716-C-A hg38:Y:18940830-C-A | ** | |||||||
| hg19:Y:21283413-C-A hg38:Y:19121527-C-A | ** | |||||||
| hg19:Y:21371689-C-A hg38:Y:19209803-C-A | ** | |||||||
| hg19:Y:21394269-G-T hg38:Y:19232383-G-T | ** | |||||||
| hg19:Y:21405887-C-A hg38:Y:19244001-C-A | ** | |||||||
| hg19:Y:21444705-C-A hg38:Y:19282819-C-A | ** | |||||||
| hg19:Y:21514022-C-A hg38:Y:19352136-C-A | ** | |||||||
| hg19:Y:21549338-T-C hg38:Y:19387452-T-C | ** | |||||||
| hg19:Y:21752972-C-A hg38:Y:19591086-C-A | ** | |||||||
| hg19:Y:21818899-T-G hg38:Y:19657013-T-G | ** | |||||||
| hg19:Y:21987361-T-A hg38:Y:19825475-T-A | ** | |||||||
| hg19:Y:21989050-A-G hg38:Y:19827164-A-G | ** | |||||||
| hg19:Y:21993962-A-T hg38:Y:19832076-A-T | ** | |||||||
| hg19:Y:22295288-T-C hg38:Y:20133402-T-C | DYZ19 | ** | ||||||
| hg19:Y:22815418-C-A hg38:Y:20653532-C-A | ** | |||||||
| hg19:Y:22913247-G-A hg38:Y:20751361-G-A | FTB15541 | ** | ||||||
| hg19:Y:22935173-C-A hg38:Y:20773287-C-A | ** | |||||||
| hg19:Y:23009975-G-T hg38:Y:20848089-G-T | ** | |||||||
| hg19:Y:23033486-T-C hg38:Y:20871600-T-C | ** | |||||||
| hg19:Y:23377330-G-A hg38:Y:21215444-G-A | ** | |||||||
| hg19:Y:23401509-C-A hg38:Y:21239623-C-A | ** | |||||||
| hg19:Y:23590757-A-C hg38:Y:21428871-A-C | ** | |||||||
| hg19:Y:23819050-C-A hg38:Y:21657164-C-A | ** | |||||||
| hg19:Y:23997654-G-T hg38:Y:21851507-G-T | ** | |||||||
| hg19:Y:24295864-T-TTC hg38:Y:22149717-T-TTC | P3_t1 | ** | ||||||
| hg19:Y:24378547-C-A hg38:Y:22232400-C-A | FT240844 | ** | ||||||
| hg19:Y:24391940-C-A hg38:Y:22245793-C-A | BY149538 | ** | ||||||
| hg19:Y:24392059-C-A hg38:Y:22245912-C-A | ** | |||||||
| hg19:Y:24415807-C-A hg38:Y:22269660-C-A | ** | |||||||
| hg19:Y:24611446-G-T hg38:Y:22465299-G-T | P3_t2 | ** | ||||||
| hg19:Y:25881880-C-A hg38:Y:23735733-C-A | P1_Y1 | ** | ||||||
| hg19:Y:26001376-C-A hg38:Y:23855229-C-A | P1_Y1 | ** | ||||||
| hg19:Y:26001404-C-A hg38:Y:23855257-C-A | P1_Y1 | ** | ||||||
| hg19:Y:26001413-C-A hg38:Y:23855266-C-A | P1_Y1 | 18×T | ** | |||||
| hg19:Y:26398417-A-T hg38:Y:24252270-A-T | P1_Y1 | ** | ||||||
| hg19:Y:26398459-A-T hg38:Y:24252312-A-T | P1_Y1 | ** | ||||||
| hg19:Y:26398467-G-T hg38:Y:24252320-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26398471-G-T hg38:Y:24252324-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26398475-C-G hg38:Y:24252328-C-G | P1_Y1 | ** | ||||||
| hg19:Y:27021885-G-A hg38:Y:24875738-G-A | P1_r4 | ** | ||||||
| hg19:Y:28402060-C-A hg38:Y:26255913-C-A | P1_gr2 | ** | ||||||
| hg19:Y:28567970-C-T hg38:Y:26421823-C-T | ** | |||||||
| hg19:Y:28608358-C-A hg38:Y:26462211-C-A | ** | |||||||
| hg19:Y:6395084-C-T hg38:Y:6527043-C-T | ** | |||||||
| hg19:Y:13457910-C-G hg38:Y:11302234-C-G | ** | |||||||
| hg19:Y:15218857-T-G hg38:Y:13106943-T-G | ** | |||||||
| hg19:Y:15838411-G-T hg38:Y:13726531-G-T | ** | |||||||
| hg19:Y:16096714-A-C hg38:Y:13984834-A-C | P8_Prx | ** | ||||||
| hg19:Y:16298535-A-T hg38:Y:14186655-A-T | ** | |||||||
| hg19:Y:17902013-T-C hg38:Y:15790133-T-C | ** | |||||||
| hg19:Y:18307623-A-G hg38:Y:16195743-A-G | P6_Prx | ** | ||||||
| hg19:Y:25108949-G-A hg38:Y:22962802-G-A | g1 | ** | ||||||
| hg19:Y:27791837-CT-C hg38:Y:25645690-CT-C | P1_Y2 | ** | ||||||
| hg19:Y:7982907-G-A hg38:Y:8114866-G-A | BY69204 | BY69204 | *** | |||||
| hg19:Y:21425339-CTTT-C,CT hg38:Y:19263453-CTTT-C,CT | 24×T | *** | ||||||
| hg19:Y:15422098-CAA-C,CA hg38:Y:13310218-CAA-C,CA | 20×A | *** | ||||||
| hg19:Y:3164998-G-T hg38:Y:3296957-G-T | *** | |||||||
| hg38:Y:10911662-G-A | *** | |||||||
| hg19:Y:23833077-C-A hg38:Y:21671191-C-A | *** | |||||||
| hg38:Y:10801701-CCA-C,CTT | *** | |||||||
| hg38:Y:10914217-T-C | *** | |||||||
| hg19:Y:8481808-CT-C,CTT hg38:Y:8613767-CT-C,CTT | 11×T | *** | ||||||
| hg38:Y:10911677-G-T | *** | |||||||
| hg38:Y:11009081-C-A | *** | |||||||
| hg19:Y:3271601-CTT-C,CTTT hg38:Y:3403560-CTT-C,CTTT | 14×T | *** | ||||||
| hg19:Y:6345964-G-T hg38:Y:6477923-G-T | *** | |||||||
| hg19:Y:7228161-C-A hg38:Y:7360120-C-A | *** | |||||||
| hg19:Y:7292321-G-A hg38:Y:7424280-G-A | *** | |||||||
| hg19:Y:7323791-C-A hg38:Y:7455750-C-A | *** | |||||||
| hg19:Y:7976413-TA-T hg38:Y:8108372-TA-T | *** | |||||||
| hg19:Y:7978153-C-A hg38:Y:8110112-C-A | *** | |||||||
| hg19:Y:8142700-C-A hg38:Y:8274659-C-A | *** | |||||||
| hg19:Y:8631435-C-A hg38:Y:8763394-C-A | *** | |||||||
| hg19:Y:8647967-C-A hg38:Y:8779926-C-A | *** | |||||||
| hg19:Y:8782170-C-A hg38:Y:8914129-C-A | *** | |||||||
| hg19:Y:9111564-G-T hg38:Y:9273955-G-T | *** | |||||||
| hg19:Y:9404259-G-T hg38:Y:9566650-G-T | *** | |||||||
| hg19:Y:9468500-G-T hg38:Y:9630891-G-T | *** | |||||||
| hg19:Y:9873784-C-A hg38:Y:10036175-C-A | *** | |||||||
| hg19:Y:9895300-C-A hg38:Y:10057691-C-A | *** | |||||||
| hg19:Y:9940421-C-A hg38:Y:10102812-C-A | *** | |||||||
| hg19:Y:10039040-C-A hg38:Y:10201431-C-A | *** | |||||||
| hg38:Y:10839789-C-A | *** | |||||||
| hg38:Y:10911583-C-A | *** | |||||||
| hg38:Y:10973947-CC-AA,C | *** | |||||||
| hg38:Y:10986164-C-A | *** | |||||||
| hg38:Y:10987828-CCA-TGTTATT | *** | |||||||
| hg19:Y:13320273-C-A hg38:Y:11164597-C-A | *** | |||||||
| hg19:Y:13422785-C-A hg38:Y:11267109-C-A | *** | |||||||
| hg19:Y:13482935-C-A hg38:Y:11327259-C-A | *** | |||||||
| hg19:Y:13643223-T-C hg38:Y:11487547-T-C | *** | |||||||
| hg19:Y:13671456-C-A hg38:Y:11515780-C-A | DYZ17 | *** | ||||||
| hg38:Y:11643732-T-TTGTAC | DYZ17 | *** | ||||||
| hg19:Y:14405033-C-A hg38:Y:12284330-C-A | *** | |||||||
| hg19:Y:14819626-C-A hg38:Y:12707693-C-A | *** | |||||||
| hg19:Y:15281443-T-C hg38:Y:13169542-T-C | *** | |||||||
| hg19:Y:15373382-C-A hg38:Y:13261502-C-A | *** | |||||||
| hg19:Y:15572370-C-T hg38:Y:13460490-C-T | *** | |||||||
| hg19:Y:15618519-C-A hg38:Y:13506639-C-A | *** | |||||||
| hg19:Y:15658807-C-A hg38:Y:13546927-C-A | *** | |||||||
| hg19:Y:15689233-C-A hg38:Y:13577353-C-A | *** | |||||||
| hg19:Y:15728215-C-A hg38:Y:13616335-C-A | *** | |||||||
| hg19:Y:15733404-C-A hg38:Y:13621524-C-A | *** | |||||||
| hg19:Y:16258911-C-A hg38:Y:14147031-C-A | *** | |||||||
| hg19:Y:16424460-G-T hg38:Y:14312580-G-T | *** | |||||||
| hg19:Y:16566028-C-A hg38:Y:14454148-C-A | *** | |||||||
| hg19:Y:17051451-C-A hg38:Y:14939571-C-A | *** | |||||||
| hg19:Y:17340371-C-A hg38:Y:15228491-C-A | *** | |||||||
| hg19:Y:17888995-C-A hg38:Y:15777115-C-A | *** | |||||||
| hg19:Y:18038644-C-A hg38:Y:15926764-C-A | *** | |||||||
| hg19:Y:18267208-C-A hg38:Y:16155328-C-A | *** | |||||||
| hg19:Y:18417226-C-A hg38:Y:16305346-C-A | P6_Gap | *** | ||||||
| hg19:Y:18568290-C-T hg38:Y:16456410-C-T | *** | |||||||
| hg19:Y:18933542-C-A hg38:Y:16821662-C-A | *** | |||||||
| hg19:Y:19415275-C-A hg38:Y:17303395-C-A | *** | |||||||
| hg19:Y:20459042-CAA-C,CAAA hg38:Y:18297156-CAA-C,CAAA | P5_Dst | 21×A | *** | |||||
| hg19:Y:20968270-G-T hg38:Y:18806384-G-T | P4_Dst | *** | ||||||
| hg19:Y:21087373-G-A hg38:Y:18925487-G-A | *** | |||||||
| hg19:Y:21091193-C-A hg38:Y:18929307-C-A | *** | |||||||
| hg19:Y:21267488-C-A hg38:Y:19105602-C-A | *** | |||||||
| hg19:Y:21815962-ATT-A hg38:Y:19654076-ATT-A | 11×T | *** | ||||||
| hg19:Y:22521696-TA-T hg38:Y:20359810-TA-T | *** | |||||||
| hg19:Y:22866328-C-A hg38:Y:20704442-C-A | *** | |||||||
| hg19:Y:23056348-CA-C hg38:Y:20894462-CA-C | *** | |||||||
| hg19:Y:23803742-TA-T hg38:Y:21641856-TA-T | 8×A | *** | ||||||
| hg19:Y:28225278-C-A hg38:Y:26079131-C-A | P1_b4 | *** | ||||||
| hg19:Y:2752415-T-TAA hg38:Y:2884374-T-TAA | 23×A | *** | ||||||
| hg19:Y:18565061-CAAAAA-C hg38:Y:16453181-CAAAAA-C | 27×A | *** | ||||||
| hg19:Y:6954965-T-C hg38:Y:7086924-T-C | *** | |||||||
| hg19:Y:9824962-G-T hg38:Y:9987353-G-T | *** | |||||||
| hg19:Y:13479944-C-A hg38:Y:11324268-C-A | *** | |||||||
| hg19:Y:13612977-A-G hg38:Y:11457301-A-G | *** | |||||||
| hg19:Y:14135820-A-G hg38:Y:12015114-A-G | *** | |||||||
| hg19:Y:15164631-AT-A hg38:Y:13052717-AT-A | *** | |||||||
| hg19:Y:15218858-A-T hg38:Y:13106944-A-T | *** | |||||||
| hg19:Y:15218860-T-C hg38:Y:13106946-T-C | *** | |||||||
| hg19:Y:15218861-G-A hg38:Y:13106947-G-A | *** | |||||||
| hg19:Y:19155916-T-C hg38:Y:17044036-T-C | *** | |||||||
| hg19:Y:21068350-G-T hg38:Y:18906464-G-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 278765 | 8853400 | 7270638 | 7206533 |
| Kit: 278765 | 15020080 | 9401875 | 8330398 |
| Used in age calculations | 15020080 | 9401875 | 8330398 |
| Counts of SNPs | 1 | 1 |
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