Ree
BigY2: 646253MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 646253 |
---|---|---|---|---|---|---|---|---|
18345260-T-A | 16233380-T-A | P6_Prx | A* | |||||
19600739-G-A | 17488859-G-A | P5_Prx | Y | A* | ||||
19692070-G-T | 17580190-G-T | P5_Prx | A* | |||||
22232830-T-A | 20070944-T-A | DYZ19 | A* | |||||
22313191-G-T | 20151305-G-T | DYZ19 | A* | |||||
25894182-C-G | 23748035-C-G | P1_Y1 | A* | |||||
26250472-A-G | 24104325-A-G | P1_Y1 | A* | |||||
22293586-C-A | 20131700-C-A | BY43765 | DYZ19 | + | ||||
6737689-T-C | 6869648-T-C | DC87 | DC88 | Y | Y | + | ||
4931698-G-A | 5063657-G-A | BY58464 | + | |||||
6688892-T-A | 6820851-T-A | F15250 | Y | Y | 9×A | + | ||
6910800-C-T | 7042759-C-T | BY62146 | Y | Y | + | |||
8199320-A-G | 8331279-A-G | BY70651 | Y | Y | + | |||
8364623-A-G | 8496582-A-G | BY72025 | Y | Y | + | |||
9024097-T-C | 9186488-T-C | BY77456 | Y | + | ||||
9067991-CAACT-C | 9230382-CAACT-C | + | ||||||
9798662-G-A | 9961053-G-A | BY81087 | Y | Y | + | |||
13289819-G-T | 11134143-G-T | BY85005 | + | |||||
13314104-G-A | 11158428-G-A | BY85135 | + | |||||
13481253-T-C | 11325577-T-C | BY86068 | + | |||||
15967059-T-C | 13855179-T-C | BY105180 | Y | Y | + | |||
15983499-A-G | 13871619-A-G | BY105310 | Y | Y | + | |||
16944135-A-C | 14832255-A-C | BY111299 | Y | Y | + | |||
17008923-A-G | 14897043-A-G | BY111695 | Y | Y | + | |||
18020374-A-G | 15908494-A-G | BY119162 | Y | + | ||||
18286185-T-C | 16174305-T-C | BY121394 | P6_Prx | + | ||||
18550814-C-T | 16438934-C-T | BY122104 | Y | + | ||||
18615186-G-T | 16503306-G-T | BY122624 | Y | Y | + | |||
19489645-A-T | 17377765-A-T | BY129499 | Y | + | ||||
21566454-C-A | 19404568-C-A | BY133908 | Y | Y | + | |||
22445033-C-G | 20283147-C-G | BY52665 | DYZ19 | + | ||||
22466926-A-T | 20305040-A-T | BY221812 | DYZ19 | + | ||||
22518689-A-G | 20356803-A-G | BY138639 | Y | + | ||||
23561206-A-G | 21399320-A-G | BY146287 | Y | Y | + | |||
24429838-A-G | 22283691-A-G | BY149841 | Y | + | ||||
28769190-C-T | 26623043-C-T | Y138158 | Y | + | ||||
22335009-C-G | 20173123-C-G | DYZ19 | * | |||||
22422341-T-C | 20260455-T-C | BY217833 | DYZ19 | * | ||||
21834100-G-A | 19672214-G-A | FGC22856 | ** | |||||
15957803-CT-C | 13845923-CT-C | 8×T | ** | |||||
13612951-CTA-C | 11457275-CTA-C | ** | ||||||
27497096-G-T | 25350949-G-T | P1_Y2 | ** | |||||
26041916-C-A | 23895769-C-A | P1_Y1 | ** | |||||
18518311-A-T | 16406431-A-T | P6_Dst | ** | |||||
15749082-C-A | 13637202-C-A | ** | ||||||
27497071-C-T | 25350924-C-T | P1_Y2 | ** | |||||
22012406-G-T | 19850520-G-T | ** | ||||||
19853773-G-A | 17741893-G-A | BY188773 | P5_Prx | ** | ||||
13213942-A-T | 11058266-A-T | ** | ||||||
15342653-T-TAA | 13230772-T-TAA | 11×A | ** | |||||
11033167-C-G | ** | |||||||
28794218-G-T | 26648071-G-T | ** | ||||||
19377130-TGGAG-T | 17265250-TGGAG-T | 4×GGAG | ** | |||||
17403784-GTAAA-G | 15291904-GTAAA-G | 4×TAAA | ** | |||||
2906785-C-A | 3038744-C-A | ** | ||||||
22809862-C-A | 20647976-C-A | ** | ||||||
13461080-A-G | 11305404-A-G | ** | ||||||
13461092-C-A | 11305416-C-A | ** | ||||||
10973002-G-C | ** | |||||||
10899052-T-C | ** | |||||||
18242822-C-A | 16130942-C-A | ** | ||||||
23262645-C-A | 21100759-C-A | ** | ||||||
10663659-C-CTCCAA | ** | |||||||
22965628-C-A | 20803742-C-A | ** | ||||||
20557663-T-A | 18395777-T-A | P5_Dst | ** | |||||
10946516-A-T | ** | |||||||
56834830-C-T | ** | |||||||
25108955-C-A | 22962808-C-A | g1 | ** | |||||
19436820-A-T | 17324940-A-T | ** | ||||||
11013601-T-C | ** | |||||||
22253079-T-G | 20091193-T-G | DYZ19 | ** | |||||
28794196-T-A | 26648049-T-A | ** | ||||||
7228420-A-T | 7360379-A-T | ** | ||||||
11656805-A-C | ** | |||||||
13213951-C-G | 11058275-C-G | ** | ||||||
13885569-C-A | 11764863-C-A | ** | ||||||
10792755-T-A | ** | |||||||
3712085-C-A | 3844044-C-A | ** | ||||||
14053573-C-A | 11932867-C-A | M12292 | ** | |||||
27952128-TAC-T | 25805981-TAC-T | P1_Y2 | ** | |||||
22128711-C-A | 19966825-C-A | ** | ||||||
8288882-C-A | 8420841-C-A | ** | ||||||
10899071-A-T | ** | |||||||
10984429-A-C | ** | |||||||
11036032-C-T | ** | |||||||
6996734-C-A | 7128693-C-A | ** | ||||||
6576593-G-T | 6708552-G-T | ** | ||||||
27423452-G-T | 25277305-G-T | P1_g3 | ** | |||||
10813609-C-T | ** | |||||||
23441381-G-A | 21279495-G-A | ** | ||||||
10963040-G-T | ** | |||||||
11033153-C-AGGATG | ** | |||||||
10838969-C-A | ** | |||||||
4272622-C-A | 4404581-C-A | ** | ||||||
11034683-T-C | ** | |||||||
15168287-C-A | 13056373-C-A | ** | ||||||
27952152-G-T | 25806005-G-T | P1_Y2 | ** | |||||
13588380-C-A | 11432704-C-A | ** | ||||||
15221913-C-A | 13109999-C-A | ** | ||||||
16688232-A-C | 14576352-A-C | ** | ||||||
4070854-C-A | 4202813-C-A | ** | ||||||
27127733-T-C | 24981586-T-C | BY226823 | P1_g3 | ** | ||||
16055965-C-A | 13944085-C-A | ** | ||||||
28614125-C-A | 26467978-C-A | ** | ||||||
28818943-C-G | 26672796-C-G | ** | ||||||
28818945-G-T | 26672798-G-T | ** | ||||||
24684821-A-T | 22538674-A-T | P3_b2 | ** | |||||
18368676-T-A | 16256796-T-A | P6_Prx | ** | |||||
7099187-A-G | 7231146-A-G | ** | ||||||
5275693-G-T | 5407652-G-T | ** | ||||||
10938317-C-A | ** | |||||||
9034493-G-T | 9196884-G-T | ** | ||||||
10813574-C-T | ** | |||||||
20793537-C-A | 18631651-C-A | P4_Prx | 11×CA | ** | ||||
13715665-A-T | 11559989-A-T | ** | ||||||
13854572-A-T | 11733866-A-T | ** | ||||||
2762045-C-A | 2894004-C-A | ** | ||||||
2898417-C-A | 3030376-C-A | ** | ||||||
2937209-G-T | 3069168-G-T | ** | ||||||
2957743-G-C | 3089702-G-C | ** | ||||||
3016388-G-T | 3148347-G-T | ** | ||||||
3093741-C-A | 3225700-C-A | ** | ||||||
3223992-C-A | 3355951-C-A | ** | ||||||
3224528-A-C | 3356487-A-C | ** | ||||||
3252465-A-G | 3384424-A-G | ** | ||||||
3286439-T-G | 3418398-T-G | ** | ||||||
3287132-T-G | 3419091-T-G | ** | ||||||
3341317-C-A | 3473276-C-A | ** | ||||||
3468154-G-T | 3600113-G-T | ** | ||||||
3535937-T-G | 3667896-T-G | ** | ||||||
3549568-C-A | 3681527-C-A | ** | ||||||
3605988-G-A | 3737947-G-A | ** | ||||||
3610285-A-T | 3742244-A-T | ** | ||||||
3625851-T-C | 3757810-T-C | ** | ||||||
3633860-G-T | 3765819-G-T | ** | ||||||
3640280-C-A | 3772239-C-A | ** | ||||||
3849219-C-A | 3981178-C-A | ** | ||||||
3908152-G-T | 4040111-G-T | ** | ||||||
3961424-A-T | 4093383-A-T | ** | ||||||
4112970-T-C | 4244929-T-C | ** | ||||||
4127487-G-T | 4259446-G-T | ** | ||||||
4171887-C-A | 4303846-C-A | ** | ||||||
4215816-G-T | 4347775-G-T | ** | ||||||
4216008-T-A | 4347967-T-A | ** | ||||||
4236038-C-A | 4367997-C-A | ** | ||||||
4302340-T-G | 4434299-T-G | FT59826 | ** | |||||
4306503-G-C | 4438462-G-C | ** | ||||||
4360602-G-T | 4492561-G-T | ** | ||||||
4374367-A-G | 4506326-A-G | ** | ||||||
4407094-G-T | 4539053-G-T | ** | ||||||
4417546-T-C | 4549505-T-C | FT70562 | ** | |||||
4445124-T-G | 4577083-T-G | ** | ||||||
4462404-C-A | 4594363-C-A | FTB22217 | ** | |||||
4462494-G-C | 4594453-G-C | ** | ||||||
4563357-A-C | 4695316-A-C | ** | ||||||
4616614-A-G | 4748573-A-G | ** | ||||||
4618697-C-A | 4750656-C-A | ** | ||||||
4647337-C-A | 4779296-C-A | ** | ||||||
4647628-C-A | 4779587-C-A | ** | ||||||
4652638-CA-C | 4784597-CA-C | 8×A | ** | |||||
4769363-C-A | 4901322-C-A | FT247864 | ** | |||||
4837626-G-T | 4969585-G-T | ** | ||||||
4900451-C-A | 5032410-C-A | ** | ||||||
4902222-T-G | 5034181-T-G | ** | ||||||
4920212-G-T | 5052171-G-T | ** | ||||||
4957621-A-G | 5089580-A-G | ** | ||||||
5151930-C-A | 5283889-C-A | ** | ||||||
5172482-C-A | 5304441-C-A | ** | ||||||
5185523-G-C | 5317482-G-C | ** | ||||||
5213229-G-T | 5345188-G-T | ** | ||||||
5248983-A-C | 5380942-A-C | ** | ||||||
5262049-G-T | 5394008-G-T | ** | ||||||
5397286-T-A | 5529245-T-A | ** | ||||||
5397309-T-A | 5529268-T-A | ** | ||||||
5412576-C-A | 5544535-C-A | ** | ||||||
5420439-T-A | 5552398-T-A | ** | ||||||
5448674-C-A | 5580633-C-A | ** | ||||||
5603607-T-G | 5735566-T-G | ** | ||||||
5629687-T-A | 5761646-T-A | ** | ||||||
5636859-G-T | 5768818-G-T | ** | ||||||
5675817-G-T | 5807776-G-T | ** | ||||||
5699771-G-T | 5831730-G-T | ** | ||||||
5870218-C-A | 6002177-C-A | ** | ||||||
5884091-G-T | 6016050-G-T | ** | ||||||
5967172-A-T | 6099131-A-T | ** | ||||||
6086091-G-T | 6218050-G-T | ** | ||||||
6086236-T-G | 6218195-T-G | ** | ||||||
6092208-C-A | 6224167-C-A | ** | ||||||
6134328-T-C | 6266287-T-C | ** | ||||||
6279442-A-G | 6411401-A-G | IR3_Dst | ** | |||||
6290628-A-T | 6422587-A-T | IR3_Dst | ** | |||||
6290633-A-T | 6422592-A-T | IR3_Dst | ** | |||||
6346082-TTATATATATATATATA-T | 6478041-TTATATATATATATATA-T | 21×TA | ** | |||||
6384431-G-T | 6516390-G-T | ** | ||||||
6596361-T-G | 6728320-T-G | ** | ||||||
6790324-C-A | 6922283-C-A | ** | ||||||
6799092-A-T | 6931051-A-T | ** | ||||||
6881274-C-A | 7013233-C-A | ** | ||||||
6998686-G-T | 7130645-G-T | ** | ||||||
7030872-G-T | 7162831-G-T | ** | ||||||
7076309-C-A | 7208268-C-A | ** | ||||||
7123538-A-C | 7255497-A-C | ** | ||||||
7152781-T-C | 7284740-T-C | ** | ||||||
7164164-A-C | 7296123-A-C | ** | ||||||
7186627-T-A | 7318586-T-A | ** | ||||||
7238120-A-C | 7370079-A-C | ** | ||||||
7338093-C-A | 7470052-C-A | ** | ||||||
7385700-C-A | 7517659-C-A | ** | ||||||
7443832-T-A | 7575791-T-A | ** | ||||||
7723901-T-A | 7855860-T-A | ** | ||||||
7925274-T-A | 8057233-T-A | ** | ||||||
8075169-C-A | 8207128-C-A | ** | ||||||
8076087-A-C | 8208046-A-C | ** | ||||||
8079082-G-T | 8211041-G-T | ** | ||||||
8296697-C-A | 8428656-C-A | ** | ||||||
8369858-T-A | 8501817-T-A | ** | ||||||
8501514-T-G | 8633473-T-G | ** | ||||||
8501524-T-G | 8633483-T-G | ** | ||||||
8678145-A-T | 8810104-A-T | ** | ||||||
8807506-T-A | 8939465-T-A | ** | ||||||
8816986-C-T | 8948945-C-T | ** | ||||||
8856642-C-A | 8988601-C-A | ** | ||||||
8907989-C-A | 9039948-C-A | ** | ||||||
9056763-C-A | ** | |||||||
9117821-C-A | ** | |||||||
9015474-C-A | 9177865-C-A | ** | ||||||
9089030-T-G | 9251421-T-G | ** | ||||||
9566667-G-T | 9729058-G-T | IR3_Prx | ** | |||||
9620139-A-C | 9782530-A-C | IR3_Prx | ** | |||||
9629208-T-TG | 9791599-T-TG | IR3_Prx | ** | |||||
9927400-A-G | 10089791-A-G | ** | ||||||
9933213-G-T | 10095604-G-T | ** | ||||||
9967141-C-A | 10129532-C-A | ** | ||||||
9975517-G-T | 10137908-G-T | ** | ||||||
9975544-T-C | 10137935-T-C | ** | ||||||
10039905-C-A | 10202296-C-A | ** | ||||||
10048234-C-A | 10210625-C-A | ** | ||||||
10048325-C-A | 10210716-C-A | ** | ||||||
10050158-C-A | 10212549-C-A | ** | ||||||
10652891-G-T | ** | |||||||
10654733-T-G | ** | |||||||
10657231-A-C | ** | |||||||
10661856-A-T | ** | |||||||
10663512-T-G | ** | |||||||
10664919-G-T | ** | |||||||
10666567-C-A | ** | |||||||
10667803-G-A | ** | |||||||
10669459-CA-C | ** | |||||||
10671311-C-A | ** | |||||||
10679485-A-C | ** | |||||||
10692489-C-A | ** | |||||||
10692619-C-A | ** | |||||||
10754012-T-G | ** | |||||||
10754433-T-C | ** | |||||||
10755897-C-A | ** | |||||||
10768260-C-A | ** | |||||||
10768867-C-A | ** | |||||||
10769392-T-G | ** | |||||||
10769400-C-T | ** | |||||||
10769411-A-ATTCTG | ** | |||||||
10769419-C-T | ** | |||||||
10778067-A-C | ** | |||||||
10783287-T-A | ** | |||||||
10783762-A-ACCATTCCATTCCATT | ** | |||||||
10785489-C-A | ** | |||||||
10791623-C-A | ** | |||||||
10791631-T-A | ** | |||||||
10794493-C-A | ** | |||||||
10800720-C-A | ** | |||||||
10801762-TATTCC-T | ** | |||||||
10807769-C-G | ** | |||||||
10807775-C-T | ** | |||||||
10813584-T-TTCTATTCAAG | ** | |||||||
10813601-C-A | ** | |||||||
10813622-C-G | ** | |||||||
10813635-T-A | ** | |||||||
10813652-AATTCC-A | ** | |||||||
10815691-C-A | ** | |||||||
10831448-T-G | ** | |||||||
10837698-T-A | ** | |||||||
10841463-C-A | ** | |||||||
10847698-A-T | ** | |||||||
10860563-C-A | ** | |||||||
10866908-G-T | ** | |||||||
10867064-C-A | ** | |||||||
10868599-C-A | ** | |||||||
10880953-C-T | FT91950 | ** | ||||||
10880975-T-C | ** | |||||||
10900225-T-C | ** | |||||||
10918990-T-A | ** | |||||||
10919647-G-C | ** | |||||||
10929050-C-T | ** | |||||||
10937394-C-CCTTTCCGTTG | ** | |||||||
10941853-A-G | FT354050 | ** | ||||||
10942385-C-T | ** | |||||||
10942390-C-T | ** | |||||||
10946591-C-A | ** | |||||||
10946616-T-G | ** | |||||||
10955283-C-A | ** | |||||||
10973178-G-T | ** | |||||||
10973723-C-A | ** | |||||||
10977438-T-C | ** | |||||||
10978291-C-A | ** | |||||||
10979233-C-A | FT438963 | ** | ||||||
10984453-CG-C | ** | |||||||
10986960-T-A | ** | |||||||
10987107-C-A | ** | |||||||
10998860-T-C | ** | |||||||
11007697-C-A | ** | |||||||
11011335-C-A | ** | |||||||
11011573-C-A | ** | |||||||
11022984-C-A | ** | |||||||
11024341-C-A | ** | |||||||
11031801-C-A | ** | |||||||
11034590-C-T | ** | |||||||
11034593-G-C | ** | |||||||
11034596-T-A | ** | |||||||
11034623-C-T | ** | |||||||
11034637-C-T | ** | |||||||
11034641-G-T | ** | |||||||
11034663-C-G | ** | |||||||
11034669-T-A | ** | |||||||
11034672-TCAAA-T | ** | |||||||
11034678-CG-C | ** | |||||||
11034690-A-G | ** | |||||||
11034712-T-TCGACA | ** | |||||||
11035267-C-A | ** | |||||||
11035271-C-A | ** | |||||||
11036037-T-C | ** | |||||||
11036036-ATTCCT-A | ** | |||||||
11036062-CTCCACTCCTT-C | ** | |||||||
13200642-C-A | 11044966-C-A | ** | ||||||
13248434-C-A | 11092758-C-A | ** | ||||||
13257501-C-A | 11101825-C-A | ** | ||||||
13304873-C-A | 11149197-C-A | ** | ||||||
13317678-C-T | 11162002-C-T | ** | ||||||
13373511-A-G | 11217835-A-G | ** | ||||||
13373518-A-C | 11217842-A-C | ** | ||||||
13373519-G-A | 11217843-G-A | ** | ||||||
13373532-C-A | 11217856-C-A | ** | ||||||
13373538-T-A | 11217862-T-A | ** | ||||||
13384435-C-A | 11228759-C-A | ** | ||||||
13394787-T-G | 11239111-T-G | ** | ||||||
13410526-C-A | 11254850-C-A | ** | ||||||
13558261-G-T | 11402585-G-T | ** | ||||||
13567049-C-A | 11411373-C-A | ** | ||||||
13567830-C-A | 11412154-C-A | ** | ||||||
13603175-T-G | 11447499-T-G | ** | ||||||
13632937-A-C | 11477261-A-C | ** | ||||||
13632950-A-T | 11477274-A-T | ** | ||||||
13641317-C-A | 11485641-C-A | ** | ||||||
13715625-A-T | 11559949-A-T | ** | ||||||
13715639-A-C | 11559963-A-C | ** | ||||||
11654262-T-A | ** | |||||||
11655126-G-A | FT271446 | ** | ||||||
11657867-C-A | FT450600 | ** | ||||||
11667307-A-C | ** | |||||||
11672977-G-T | ** | |||||||
11675512-G-A | ** | |||||||
11675531-G-A | ** | |||||||
11675742-A-G | ** | |||||||
13804175-A-C | 11683469-A-C | ** | ||||||
13809836-A-T | 11689130-A-T | ** | ||||||
13855309-A-C | 11734603-A-C | ** | ||||||
13856258-G-T | 11735552-G-T | ** | ||||||
13861072-A-C | 11740366-A-C | ** | ||||||
13872195-C-A | 11751489-C-A | ** | ||||||
13897018-C-A | 11776312-C-A | ** | ||||||
13901902-C-A | 11781196-C-A | ** | ||||||
13901955-C-A | 11781249-C-A | ** | ||||||
13939868-T-C | 11819162-T-C | ** | ||||||
13952530-T-C | 11831824-T-C | ** | ||||||
13960802-C-A | 11840096-C-A | M1954 | ** | |||||
13987041-C-A | 11866335-C-A | ** | ||||||
13999776-G-T | 11879070-G-T | ** | ||||||
14065692-C-A | 11944986-C-A | ** | ||||||
14107097-C-A | 11986391-C-A | ** | ||||||
14118254-T-A | 11997548-T-A | ** | ||||||
14118335-A-C | 11997629-A-C | ** | ||||||
14123731-C-A | 12003025-C-A | ** | ||||||
14142909-C-A | 12022203-C-A | ** | ||||||
14247061-T-G | 12126355-T-G | ** | ||||||
14252212-T-A | 12131506-T-A | ** | ||||||
14252221-G-T | 12131515-G-T | ** | ||||||
14279672-C-A | 12158966-C-A | ** | ||||||
14352364-T-G | 12231659-T-G | ** | ||||||
14373620-C-A | 12252916-C-A | ** | ||||||
14445280-C-A | 12324553-C-A | ** | ||||||
14447306-G-T | 12326579-G-T | ** | ||||||
14450005-T-G | 12329278-T-G | ** | ||||||
14451250-C-A | 12330523-C-A | ** | ||||||
14564055-C-A | 12452255-C-A | ** | ||||||
14678930-A-G | 12566996-A-G | ** | ||||||
14959766-T-G | 12847841-T-G | ** | ||||||
14981928-C-A | 12869996-C-A | ** | ||||||
15127004-T-G | 13015091-T-G | ** | ||||||
15127024-T-G | 13015111-T-G | ** | ||||||
15131865-T-G | 13019952-T-G | 5×CCTC | ** | |||||
15177764-C-A | 13065850-C-A | ** | ||||||
15218684-G-T | 13106770-G-T | ** | ||||||
15300788-C-A | 13188887-C-A | ** | ||||||
15399299-T-G | 13287419-T-G | ** | ||||||
15424411-G-A | 13312531-G-A | FTA26840 | ** | |||||
15574906-C-A | 13463026-C-A | ** | ||||||
15595248-G-T | 13483368-G-T | ** | ||||||
15648751-A-AC | 13536871-A-AC | ** | ||||||
15662415-C-A | 13550535-C-A | ** | ||||||
15680077-C-A | 13568197-C-A | ** | ||||||
15735374-C-A | 13623494-C-A | ** | ||||||
15761060-A-C | 13649180-A-C | ** | ||||||
15774920-G-T | 13663040-G-T | ** | ||||||
15918497-C-A | 13806617-C-A | ** | ||||||
16016307-C-A | 13904427-C-A | ** | ||||||
16029617-C-A | 13917737-C-A | ** | ||||||
16146474-AAAAGAAAAGAAAG-A | 14034594-AAAAGAAAAGAAAG-A | P8_Dst | ** | |||||
16270316-C-A | 14158436-C-A | ** | ||||||
16270387-A-C | 14158507-A-C | ** | ||||||
16270460-T-G | 14158580-T-G | ** | ||||||
16271091-C-A | 14159211-C-A | ** | ||||||
16357248-C-A | 14245368-C-A | ** | ||||||
16394519-A-C | 14282639-A-C | ** | ||||||
16437463-G-T | 14325583-G-T | ** | ||||||
16490650-C-A | 14378770-C-A | ** | ||||||
16573984-C-A | 14462104-C-A | ** | ||||||
16607795-T-G | 14495915-T-G | ** | ||||||
16688235-A-T | 14576355-A-T | ** | ||||||
16720514-C-T | 14608634-C-T | ** | ||||||
16847747-A-C | 14735867-A-C | ** | ||||||
16931996-C-A | 14820116-C-A | ** | ||||||
16932881-T-G | 14821001-T-G | ** | ||||||
16979987-T-G | 14868107-T-G | ** | ||||||
17014528-A-C | 14902648-A-C | ** | ||||||
17034961-C-A | 14923081-C-A | ** | ||||||
17297261-C-A | 15185381-C-A | ** | ||||||
17306704-A-G | 15194824-A-G | ** | ||||||
17426631-A-C | 15314751-A-C | ** | ||||||
17474892-A-T | 15363012-A-T | ** | ||||||
17503963-GTGAGCC-G | 15392083-GTGAGCC-G | ** | ||||||
17511820-C-A | 15399940-C-A | ** | ||||||
17548530-C-A | 15436650-C-A | ** | ||||||
17666865-C-A | 15554985-C-A | ** | ||||||
17737549-C-A | 15625669-C-A | ** | ||||||
17884504-C-A | 15772624-C-A | ** | ||||||
18151920-C-A | 16040040-C-A | ** | ||||||
18190656-C-A | 16078776-C-A | ** | ||||||
18368698-C-A | 16256818-C-A | P6_Prx | ** | |||||
18463117-TATGTATGTATGTA-T | 16351237-TATGTATGTATGTA-T | P6_Dst | ** | |||||
18565424-C-A | 16453544-C-A | ** | ||||||
18707254-A-G | 16595374-A-G | ** | ||||||
18707317-C-A | 16595437-C-A | ** | ||||||
18710218-G-A | 16598338-G-A | ** | ||||||
18794085-A-C | 16682205-A-C | ** | ||||||
18928570-CAAAAAA-C | 16816690-CAAAAAA-C | 28×A | ** | |||||
19031251-G-T | 16919371-G-T | ** | ||||||
19044553-T-A | 16932673-T-A | ** | ||||||
19071064-T-G | 16959184-T-G | ** | ||||||
19073815-G-T | 16961935-G-T | ** | ||||||
19249945-GA-G | 17138065-GA-G | ** | ||||||
19310535-C-A | 17198655-C-A | ** | ||||||
19310965-C-A | 17199085-C-A | ** | ||||||
19436774-G-T | 17324894-G-T | ** | ||||||
19436778-G-T | 17324898-G-T | ** | ||||||
19436782-G-T | 17324902-G-T | ** | ||||||
19509890-A-C | 17398010-A-C | ** | ||||||
19547580-C-A | 17435700-C-A | ** | ||||||
19606969-A-C | 17495089-A-C | P5_Prx | ** | |||||
19678038-C-A | 17566158-C-A | P5_Prx | ** | |||||
19749296-C-A | 17637416-C-A | P5_Prx | ** | |||||
19749305-C-A | 17637425-C-A | P5_Prx | ** | |||||
19937284-G-GC | 17825404-G-GC | P5_Prx | 13×C | ** | ||||
19961902-G-T | 17850022-G-T | P5_Prx | ** | |||||
20040700-G-T | 17928820-G-T | P5_Prx | ** | |||||
20045282-G-A | 17933402-G-A | P5_Prx | ** | |||||
20045513-A-T | 17933633-A-T | P5_Prx | ** | |||||
20332165-T-A | 18170279-T-A | P5_Dst | ** | |||||
20557658-TGC-A | 18395772-TGC-A | P5_Dst | ** | |||||
20645896-C-A | 18484010-C-A | P4_Prx | ** | |||||
20768918-A-G | 18607032-A-G | P4_Prx | ** | |||||
20768939-A-C | 18607053-A-C | P4_Prx | ** | |||||
20775649-G-T | 18613763-G-T | P4_Prx | ** | |||||
21015170-T-G | 18853284-T-G | P4_Dst | ** | |||||
21015185-T-G | 18853299-T-G | P4_Dst | ** | |||||
21200236-G-T | 19038350-G-T | ** | ||||||
21241872-C-A | 19079986-C-A | ** | ||||||
21296859-C-A | 19134973-C-A | ** | ||||||
21325721-A-C | 19163835-A-C | ** | ||||||
21367295-T-A | 19205409-T-A | ** | ||||||
21477096-A-C | 19315210-A-C | ** | ||||||
21477127-T-G | 19315241-T-G | ** | ||||||
21503068-C-A | 19341182-C-A | ** | ||||||
21585275-C-A | 19423389-C-A | ** | ||||||
21597418-G-T | 19435532-G-T | ** | ||||||
21604010-A-C | 19442124-A-C | ** | ||||||
21635206-C-A | 19473320-C-A | ** | ||||||
22065238-A-C | 19903352-A-C | ** | ||||||
22253022-T-G | 20091136-T-G | DYZ19 | ** | |||||
22253088-A-C | 20091202-A-C | DYZ19 | ** | |||||
22426936-C-A | 20265050-C-A | DYZ19 | ** | |||||
22436480-C-T | 20274594-C-T | DYZ19 | ** | |||||
22474500-C-T | 20312614-C-T | FGC63576 | DYZ19 | ** | ||||
22474502-G-A | 20312616-G-A | DYZ19 | ** | |||||
22592404-C-A | 20430518-C-A | ** | ||||||
22644678-C-A | 20482792-C-A | ** | ||||||
22713081-T-G | 20551195-T-G | ** | ||||||
22765647-C-T | 20603761-C-T | ** | ||||||
22787193-C-A | 20625307-C-A | ** | ||||||
22836690-C-A | 20674804-C-A | ** | ||||||
23026873-G-C | 20864987-G-C | ** | ||||||
23037944-A-T | 20876058-A-T | ** | ||||||
23720402-G-T | 21558516-G-T | ** | ||||||
23720409-T-A | 21558523-T-A | ** | ||||||
23773614-T-A | 21611728-T-A | ** | ||||||
23790220-C-A | 21628334-C-A | ** | ||||||
21750639-G-T | ** | |||||||
24246983-G-T | 22100836-G-T | P3_b1 | ** | |||||
24291237-C-A | 22145090-C-A | P3_t1 | ** | |||||
24300813-C-CTG | 22154666-C-CTG | P3_t1 | 25×T | ** | ||||
24402231-C-A | 22256084-C-A | ** | ||||||
24684773-C-A | 22538626-C-A | P3_b2 | ** | |||||
24684794-A-T | 22538647-A-T | P3_b2 | ** | |||||
24684811-A-T | 22538664-A-T | P3_b2 | ** | |||||
24684848-C-A | 22538701-C-A | P3_b2 | ** | |||||
25354253-T-A | 23208106-T-A | P2_r1 | ** | |||||
25354262-T-A | 23208115-T-A | P2_r1 | ** | |||||
25354266-T-A | 23208119-T-A | P2_r1 | ** | |||||
25354274-C-A | 23208127-C-A | P2_r1 | ** | |||||
25354295-G-T | 23208148-G-T | P2_r1 | ** | |||||
25985663-A-T | 23839516-A-T | P1_Y1 | ** | |||||
26043754-A-G | 23897607-A-G | P1_Y1 | ** | |||||
26099732-A-T | 23953585-A-T | P1_Y1 | ** | |||||
26124459-CG-T | 23978312-CG-T | P1_Y1 | ** | |||||
26140257-A-C | 23994110-A-C | P1_Y1 | ** | |||||
26228739-T-A | 24082592-T-A | P1_Y1 | ** | |||||
26228765-G-T | 24082618-G-T | P1_Y1 | ** | |||||
27155037-T-TGC | 25008890-T-TGC | P1_g3 | ** | |||||
27499380-G-A | 25353233-G-A | P1_Y2 | ** | |||||
27676432-C-T | 25530285-C-T | P1_Y2 | ** | |||||
27693049-T-C | 25546902-T-C | P1_Y2 | ** | |||||
27896023-C-A | 25749876-C-A | P1_Y2 | ** | |||||
27896023-C-CA | 25749876-C-CA | P1_Y2 | ** | |||||
27966818-C-A | 25820671-C-A | P1_Y2 | ** | |||||
28104378-C-A | 25958231-C-A | P1_Y2 | ** | |||||
28104384-C-A | 25958237-C-A | P1_Y2 | ** | |||||
28104390-C-A | 25958243-C-A | P1_Y2 | ** | |||||
28104402-A-T | 25958255-A-T | P1_Y2 | ** | |||||
28104420-A-T | 25958273-A-T | P1_Y2 | ** | |||||
28104432-C-A | 25958285-C-A | P1_Y2 | ** | |||||
28104433-A-T | 25958286-A-T | P1_Y2 | ** | |||||
28533143-T-G | 26386996-T-G | ** | ||||||
28535403-T-A | 26389256-T-A | ** | ||||||
28535549-C-A | 26389402-C-A | ** | ||||||
28542458-G-T | 26396311-G-T | ** | ||||||
28560081-C-A | 26413934-C-A | ** | ||||||
28633642-C-A | 26487495-C-A | ** | ||||||
28633746-C-A | 26487599-C-A | ** | ||||||
28656729-A-C | 26510582-A-C | ** | ||||||
28743740-G-T | 26597593-G-T | ** | ||||||
28763267-C-A | 26617120-C-A | ** | ||||||
28781494-C-A | 26635347-C-A | ** | ||||||
28794192-G-T | 26648045-G-T | ** | ||||||
28802600-A-T | 26656453-A-T | ** | ||||||
28802621-A-T | 26656474-A-T | ** | ||||||
56823322-A-C | ** | |||||||
56839103-A-T | ** | |||||||
56839127-T-G | ** | |||||||
56850200-C-A | ** | |||||||
56860380-G-T | ** | |||||||
23391-C-G | ** | |||||||
21608032-TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-T | 19446146-TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-T | 46×A | *** | |||||
5214160-C-A | 5346119-C-A | *** | ||||||
5313525-C-A | 5445484-C-A | *** | ||||||
6401394-G-C | 6533353-G-C | *** | ||||||
6582701-C-A | 6714660-C-A | *** | ||||||
8822673-C-A | 8954632-C-A | *** | ||||||
10023023-CTCCCTAG-C | 10185414-CTCCCTAG-C | *** | ||||||
10659729-C-A | *** | |||||||
10787957-C-A | *** | |||||||
10788047-C-A | *** | |||||||
10860503-C-A | *** | |||||||
10971921-C-A | *** | |||||||
13804091-G-T | 11683385-G-T | *** | ||||||
13867986-T-TAATGGAATGGAATGG | 11747280-T-TAATGGAATGGAATGG | 10×AATGG | *** | |||||
14278471-C-A | 12157765-C-A | *** | ||||||
15532909-C-A | 13421029-C-A | *** | ||||||
16246156-G-T | 14134276-G-T | *** | ||||||
17056926-TATAATA-T,TATA | 14945046-TATAATA-T,TATA | 12×ATA | *** | |||||
21934737-C-A | 19772851-C-A | *** | ||||||
22429345-G-C | 20267459-G-C | DYZ19 | *** | |||||
22775084-C-A | 20613198-C-A | *** | ||||||
23306683-C-A | 21144797-C-A | *** | ||||||
27039154-C-A | 24893007-C-A | P1_r4 | *** | |||||
56742698-A-G | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.