Horton
BigY3: 331647, BigY2: 331647MDKA Birth:
EnglandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY3 331647 | BigY2 331647 |
|---|---|---|---|---|---|---|---|---|
| hg19:Y:22219659-A-T hg38:Y:20057773-A-T | DYZ19 | A+ | ||||||
| hg19:Y:22304438-C-G hg38:Y:20142552-C-G | ZS312 | DYZ19 | A* | |||||
| hg19:Y:22438399-G-T hg38:Y:20276513-G-T | BY218538 | DYZ19 | A* | |||||
| hg19:Y:28817185-G-C hg38:Y:26671038-G-C | A* | |||||||
| hg38:Y:56833428-T-C | A* | |||||||
| hg19:Y:19837960-G-GA hg38:Y:17726080-G-GA | P5_Prx | A* | A* | |||||
| hg19:Y:20628781-A-G hg38:Y:18466895-A-G | P4_Prx | A* | A* | |||||
| hg19:Y:20635486-G-C hg38:Y:18473600-G-C | P4_Prx | A* | ||||||
| hg19:Y:20796753-C-T hg38:Y:18634867-C-T | P4_Prx | A* | A* | |||||
| hg19:Y:26092557-T-C hg38:Y:23946410-T-C | P1_Y1 | A* | A* | |||||
| hg19:Y:28800211-G-C hg38:Y:26654064-G-C | A* | |||||||
| hg19:Y:13463123-G-A hg38:Y:11307447-G-A | A* | |||||||
| hg19:Y:28793092-G-A hg38:Y:26646945-G-A | A* | |||||||
| hg19:Y:13451018-C-G hg38:Y:11295342-C-G | A* | |||||||
| hg19:Y:13451454-C-T hg38:Y:11295778-C-T | A* | |||||||
| hg38:Y:56834800-C-T | A* | |||||||
| hg38:Y:56832448-A-C | A* | |||||||
| hg19:Y:13687135-C-G hg38:Y:11531459-C-G | DYZ17 | A* | ||||||
| hg19:Y:18364645-G-A hg38:Y:16252765-G-A | P6_Prx | A* | ||||||
| hg19:Y:25903870-G-T hg38:Y:23757723-G-T | P1_Y1 | A* | ||||||
| hg19:Y:26396434-G-A hg38:Y:24250287-G-A | P1_Y1 | A* | ||||||
| hg19:Y:27566003-C-T hg38:Y:25419856-C-T | P1_Y2 | A* | ||||||
| hg38:Y:56836749-C-A | A* | |||||||
| hg19:Y:16070657-T-C hg38:Y:13958777-T-C | FT37057 | Y | + | ** | ||||
| hg19:Y:7147472-G-A hg38:Y:7279431-G-A | BY40291 | Y | Y | + | + | |||
| hg19:Y:7558423-T-C hg38:Y:7690382-T-C | BY40292 | Y | Y | + | + | |||
| hg19:Y:8101003-C-T hg38:Y:8232962-C-T | BY69947 | Y | Y | + | + | |||
| hg19:Y:8742535-GT-G hg38:Y:8874494-GT-G | 10×T | + | + | |||||
| hg19:Y:8823072-A-T hg38:Y:8955031-A-T | BY40293 | Y | Y | + | + | |||
| hg19:Y:8908168-G-A hg38:Y:9040127-G-A | BY40294 | + | + | |||||
| hg38:Y:10988170-A-G | FT402622 | + | ** | |||||
| hg19:Y:14117710-A-T hg38:Y:11997004-A-T | BY40295 | Y | Y | + | + | |||
| hg19:Y:14265259-T-A hg38:Y:12144553-T-A | Y90863 | Y | Y | + | + | |||
| hg19:Y:15461064-A-G hg38:Y:13349184-A-G | BY101728 | Y | Y | + | + | |||
| hg19:Y:16907444-T-C hg38:Y:14795564-T-C | BY40296 | Y | Y | + | + | |||
| hg19:Y:17045418-T-A hg38:Y:14933538-T-A | BY40297 | Y | Y | + | + | |||
| hg19:Y:18163015-T-G hg38:Y:16051135-T-G | BY40298 | Y | Y | + | + | |||
| hg19:Y:18552000-T-C hg38:Y:16440120-T-C | BY40299 | Y | + | + | ||||
| hg19:Y:18782378-G-T hg38:Y:16670498-G-T | BY123857 | Y | Y | + | + | |||
| hg19:Y:19395925-T-C hg38:Y:17284045-T-C | BY40300 | Y | Y | + | + | |||
| hg19:Y:20828774-C-G hg38:Y:18666888-C-G | BY40301 | P4_Gap | + | + | ||||
| hg19:Y:21621189-C-A hg38:Y:19459303-C-A | BY40302 | Y | Y | + | + | |||
| hg19:Y:22440918-T-A hg38:Y:20279032-T-A | BY40305 | DYZ19 | ** | + | ||||
| hg19:Y:22463876-G-C hg38:Y:20301990-G-C | BY40306 | DYZ19 | + | + | ||||
| hg19:Y:22464659-C-A hg38:Y:20302773-C-A | BY40307 | DYZ19 | + | + | ||||
| hg19:Y:22472751-C-A hg38:Y:20310865-C-A | BY40308 | DYZ19 | * | + | ||||
| hg19:Y:22506007-G-C hg38:Y:20344121-G-C | BY225142 | DYZ19 | ** | + | ||||
| hg19:Y:23240043-C-T hg38:Y:21078157-C-T | BY40309 | Y | + | + | ||||
| hg19:Y:23747468-G-A hg38:Y:21585582-G-A | BY147338 | Y | + | + | ||||
| hg19:Y:24889117-GT-G hg38:Y:22742970-GT-G | g1 | + | + | |||||
| hg19:Y:28515773-A-G hg38:Y:26369626-A-G | FT38002 | + | ** | |||||
| hg19:Y:5279569-T-C hg38:Y:5411528-T-C | FT36105 | + | ||||||
| hg19:Y:5319010-T-C hg38:Y:5450969-T-C | FT36119 | + | ||||||
| hg19:Y:5363052-C-T hg38:Y:5495011-C-T | FT36135 | + | ||||||
| hg19:Y:5374099-C-T hg38:Y:5506058-C-T | FTA42881 | + | ||||||
| hg19:Y:5414990-T-C hg38:Y:5546949-T-C | FT36147 | + | ||||||
| hg19:Y:6799110-G-T hg38:Y:6931069-G-T | FTA35838 | Y | Y | + | ||||
| hg19:Y:16468685-G-A hg38:Y:14356805-G-A | FT37104 | Y | + | |||||
| hg19:Y:28499403-G-C hg38:Y:26353256-G-C | FT38000 | + | ||||||
| hg19:Y:24264513-CT-C hg38:Y:22118366-CT-C | P3_b1 | 18×T | * | |||||
| hg38:Y:9107968-G-A | * | *** | ||||||
| hg19:Y:14637685-AGTGT-A hg38:Y:12525754-AGTGT-A | 11×GT | * | * | |||||
| hg19:Y:22280977-A-T hg38:Y:20119091-A-T | DYZ19 | * | * | |||||
| hg19:Y:3549618-G-C hg38:Y:3681577-G-C | FT35750 | * | ||||||
| hg38:Y:10837808-ATCCATTCCATTCCATTCCAT-A | * | |||||||
| hg19:Y:3458994-A-T hg38:Y:3590953-A-T | ** | |||||||
| hg19:Y:7166544-C-A hg38:Y:7298503-C-A | ** | |||||||
| hg19:Y:6346082-T-TTATA hg38:Y:6478041-T-TTATA | 21×TA | ** | ||||||
| hg19:Y:14743154-CAAAAAA-C hg38:Y:12631222-CAAAAAA-C | 19×A | ** | ||||||
| hg19:Y:27077142-C-A hg38:Y:24930995-C-A | P1_r4 | ** | ||||||
| hg38:Y:10799447-C-T | ** | |||||||
| hg19:Y:9428093-G-T hg38:Y:9590484-G-T | ** | |||||||
| hg19:Y:13870548-C-A hg38:Y:11749842-C-A | ** | |||||||
| hg38:Y:10799509-C-G | ** | |||||||
| hg38:Y:10974704-C-CA | ** | |||||||
| hg19:Y:28794246-A-T hg38:Y:26648099-A-T | ** | |||||||
| hg19:Y:27077136-G-T hg38:Y:24930989-G-T | P1_r4 | ** | ||||||
| hg19:Y:2708456-G-A hg38:Y:2840415-G-A | ** | |||||||
| hg38:Y:10787195-T-G | ** | |||||||
| hg38:Y:10756608-GCATTC-G | ** | |||||||
| hg38:Y:10887302-C-A | ** | |||||||
| hg19:Y:2947894-C-A hg38:Y:3079853-C-A | ** | |||||||
| hg19:Y:25466566-A-C hg38:Y:23320419-A-C | P2_r2 | ** | ||||||
| hg19:Y:21700595-GAAAAAA-G hg38:Y:19538709-GAAAAAA-G | 17×A | ** | ||||||
| hg38:Y:11017366-T-C | ** | |||||||
| hg19:Y:22123040-C-A hg38:Y:19961154-C-A | ** | |||||||
| hg19:Y:17466550-C-A hg38:Y:15354670-C-A | FGC54517 | ** | ||||||
| hg38:Y:10969287-A-T | ** | |||||||
| hg19:Y:13963362-C-A hg38:Y:11842656-C-A | ** | |||||||
| hg19:Y:14097966-TTTG-T hg38:Y:11977260-TTTG-T | ** | |||||||
| hg38:Y:10838345-T-A | ** | |||||||
| hg38:Y:9113966-G-T | ** | |||||||
| hg19:Y:25892209-G-A hg38:Y:23746062-G-A | P1_Y1 | ** | ||||||
| hg38:Y:56843864-C-T | ** | |||||||
| hg38:Y:10801641-C-T | ** | |||||||
| hg19:Y:23818398-C-A hg38:Y:21656512-C-A | ** | |||||||
| hg19:Y:6268763-C-A hg38:Y:6400722-C-A | IR3_Dst | ** | ||||||
| hg38:Y:11649518-A-T | DYZ17 | ** | ||||||
| hg38:Y:11649529-C-A | DYZ17 | ** | ||||||
| hg38:Y:10817364-T-C | FT191108 | ** | ||||||
| hg19:Y:13910007-C-A hg38:Y:11789301-C-A | ** | |||||||
| hg19:Y:6268748-C-A hg38:Y:6400707-C-A | IR3_Dst | ** | ||||||
| hg19:Y:17629707-A-C hg38:Y:15517827-A-C | ** | |||||||
| hg19:Y:17376981-G-T hg38:Y:15265101-G-T | ** | |||||||
| hg19:Y:15732864-T-C hg38:Y:13620984-T-C | ** | |||||||
| hg19:Y:5188609-C-A hg38:Y:5320568-C-A | ** | |||||||
| hg38:Y:10764584-C-CCCCTTGGATTGATTGAATGT | ** | |||||||
| hg38:Y:10814550-T-C | ** | |||||||
| hg19:Y:19924662-T-TG hg38:Y:17812782-T-TG | P5_Prx | ** | ||||||
| hg19:Y:28598098-C-A hg38:Y:26451951-C-A | ** | |||||||
| hg19:Y:23438922-C-A hg38:Y:21277036-C-A | F26076 | ** | ||||||
| hg19:Y:15533115-C-A hg38:Y:13421235-C-A | ** | |||||||
| hg19:Y:20574944-GTTTTT-G hg38:Y:18413058-GTTTTT-G | P5_Dst | 19×T | ** | |||||
| hg19:Y:7166856-C-A hg38:Y:7298815-C-A | ** | |||||||
| hg19:Y:13429751-C-A hg38:Y:11274075-C-A | ** | |||||||
| hg38:Y:56850807-C-G | ** | |||||||
| hg38:Y:11017316-C-T | ** | |||||||
| hg19:Y:17478929-C-A hg38:Y:15367049-C-A | ** | |||||||
| hg19:Y:2970863-C-A hg38:Y:3102822-C-A | ** | |||||||
| hg19:Y:3115378-C-A hg38:Y:3247337-C-A | FT158543 | ** | ||||||
| hg19:Y:3135298-C-A hg38:Y:3267257-C-A | ** | |||||||
| hg19:Y:3275650-T-A hg38:Y:3407609-T-A | ** | |||||||
| hg19:Y:3435791-T-C hg38:Y:3567750-T-C | ** | |||||||
| hg19:Y:3535792-A-T hg38:Y:3667751-A-T | ** | |||||||
| hg19:Y:3791009-C-A hg38:Y:3922968-C-A | ** | |||||||
| hg19:Y:3998964-A-G hg38:Y:4130923-A-G | ** | |||||||
| hg19:Y:4293653-C-A hg38:Y:4425612-C-A | ** | |||||||
| hg19:Y:4466789-C-A hg38:Y:4598748-C-A | ** | |||||||
| hg19:Y:4784441-T-G hg38:Y:4916400-T-G | ** | |||||||
| hg19:Y:4897918-C-A hg38:Y:5029877-C-A | ** | |||||||
| hg19:Y:5018768-G-T hg38:Y:5150727-G-T | ** | |||||||
| hg19:Y:5214381-C-A hg38:Y:5346340-C-A | ** | |||||||
| hg19:Y:5218882-C-A hg38:Y:5350841-C-A | ** | |||||||
| hg19:Y:5453279-C-A hg38:Y:5585238-C-A | ** | |||||||
| hg19:Y:5523116-T-C hg38:Y:5655075-T-C | ** | |||||||
| hg19:Y:5524700-C-T hg38:Y:5656659-C-T | ** | |||||||
| hg19:Y:5675437-G-T hg38:Y:5807396-G-T | ** | |||||||
| hg19:Y:5792580-G-T hg38:Y:5924539-G-T | ** | |||||||
| hg19:Y:5866935-C-A hg38:Y:5998894-C-A | ** | |||||||
| hg19:Y:6045789-A-G hg38:Y:6177748-A-G | ** | |||||||
| hg19:Y:6238650-C-A hg38:Y:6370609-C-A | IR3_Dst | ** | ||||||
| hg19:Y:6268766-AC-A hg38:Y:6400725-AC-A | IR3_Dst | ** | ||||||
| hg19:Y:6281873-A-T hg38:Y:6413832-A-T | IR3_Dst | ** | ||||||
| hg19:Y:6305782-G-T hg38:Y:6437741-G-T | IR3_Dst | ** | ||||||
| hg19:Y:6648369-C-A hg38:Y:6780328-C-A | ** | |||||||
| hg19:Y:6748974-T-A hg38:Y:6880933-T-A | ** | |||||||
| hg19:Y:6984275-G-T hg38:Y:7116234-G-T | ** | |||||||
| hg19:Y:7042775-C-A hg38:Y:7174734-C-A | ** | |||||||
| hg19:Y:7091225-C-G hg38:Y:7223184-C-G | ** | |||||||
| hg19:Y:7108506-G-T hg38:Y:7240465-G-T | ** | |||||||
| hg19:Y:7159284-A-G hg38:Y:7291243-A-G | ** | |||||||
| hg19:Y:7160839-C-A hg38:Y:7292798-C-A | ** | |||||||
| hg19:Y:7418428-C-A hg38:Y:7550387-C-A | ** | |||||||
| hg19:Y:7990425-C-A hg38:Y:8122384-C-A | ** | |||||||
| hg19:Y:7990492-T-A hg38:Y:8122451-T-A | ** | |||||||
| hg19:Y:8333629-T-A hg38:Y:8465588-T-A | ** | |||||||
| hg19:Y:8379234-C-A hg38:Y:8511193-C-A | ** | |||||||
| hg19:Y:8736431-T-C hg38:Y:8868390-T-C | ** | |||||||
| hg38:Y:9109359-G-T | ** | |||||||
| hg38:Y:9121492-A-C | ** | |||||||
| hg19:Y:9015369-G-T hg38:Y:9177760-G-T | ** | |||||||
| hg19:Y:9140088-C-A hg38:Y:9302479-C-A | ** | |||||||
| hg19:Y:9564511-G-GTC hg38:Y:9726902-G-GTC | IR3_Prx | ** | ||||||
| hg19:Y:9689094-G-T hg38:Y:9851485-G-T | IR3_Prx | ** | ||||||
| hg38:Y:10656760-T-A | ** | |||||||
| hg38:Y:10663416-A-T | ** | |||||||
| hg38:Y:10666729-C-A | ** | |||||||
| hg38:Y:10684276-C-A | ** | |||||||
| hg38:Y:10688957-C-A | ** | |||||||
| hg38:Y:10694008-C-A | ** | |||||||
| hg38:Y:10756134-T-G | ** | |||||||
| hg38:Y:10759095-C-A | ** | |||||||
| hg38:Y:10765841-A-T | ** | |||||||
| hg38:Y:10765843-A-C | ** | |||||||
| hg38:Y:10765852-A-T | ** | |||||||
| hg38:Y:10765854-G-C | ** | |||||||
| hg38:Y:10765856-T-A | ** | |||||||
| hg38:Y:10765862-T-C | ** | |||||||
| hg38:Y:10765868-G-C | ** | |||||||
| hg38:Y:10775876-A-G | ** | |||||||
| hg38:Y:10778275-T-A | ** | |||||||
| hg38:Y:10788775-C-A | ** | |||||||
| hg38:Y:10799477-C-T | ** | |||||||
| hg38:Y:10799488-C-A | ** | |||||||
| hg38:Y:10807795-C-A | ** | |||||||
| hg38:Y:10808560-G-T | ** | |||||||
| hg38:Y:10812996-A-C | ** | |||||||
| hg38:Y:10813021-A-ATTTAC | ** | |||||||
| hg38:Y:10818911-C-A | ** | |||||||
| hg38:Y:10821617-C-A | ** | |||||||
| hg38:Y:10826202-A-T | ** | |||||||
| hg38:Y:10826208-C-G | ** | |||||||
| hg38:Y:10826211-C-T | ** | |||||||
| hg38:Y:10826212-A-G | ** | |||||||
| hg38:Y:10837808-ATCCATTCCATTCCATTCCATTCCAT-A | ** | |||||||
| hg38:Y:10846904-A-G | ** | |||||||
| hg38:Y:10846910-C-A | ** | |||||||
| hg38:Y:10849615-C-A | ** | |||||||
| hg38:Y:10869394-C-A | ** | |||||||
| hg38:Y:10877297-C-A | ** | |||||||
| hg38:Y:10878820-A-T | ** | |||||||
| hg38:Y:10883887-C-A | ** | |||||||
| hg38:Y:10888296-C-A | ** | |||||||
| hg38:Y:10898686-G-T | ** | |||||||
| hg38:Y:10900180-A-C | ** | |||||||
| hg38:Y:10901850-G-T | ** | |||||||
| hg38:Y:10902511-G-T | ** | |||||||
| hg38:Y:10923625-A-T | ** | |||||||
| hg38:Y:10945652-T-C | ** | |||||||
| hg38:Y:10947893-T-G | ** | |||||||
| hg38:Y:10958228-C-A | ** | |||||||
| hg38:Y:10969170-C-A | ** | |||||||
| hg38:Y:10969271-C-T | ** | |||||||
| hg38:Y:10969272-A-C | ** | |||||||
| hg38:Y:10969289-T-C | ** | |||||||
| hg38:Y:10978873-A-T | ** | |||||||
| hg38:Y:10980139-C-A | ** | |||||||
| hg38:Y:10988590-CATTTCA-C | ** | |||||||
| hg38:Y:10988598-TCCAC-T | ** | |||||||
| hg38:Y:10995363-C-A | ** | |||||||
| hg38:Y:10998178-G-T | ** | |||||||
| hg38:Y:11000122-G-T | ** | |||||||
| hg38:Y:11017338-A-T | ** | |||||||
| hg38:Y:11017350-A-G | ** | |||||||
| hg38:Y:11017359-A-T | ** | |||||||
| hg38:Y:11017360-A-G | ** | |||||||
| hg38:Y:11017380-G-C | ** | |||||||
| hg38:Y:11019484-C-A | ** | |||||||
| hg38:Y:11021531-TCATTCTATTA-T | ** | |||||||
| hg38:Y:11021599-G-A | ** | |||||||
| hg38:Y:11030301-A-T | ** | |||||||
| hg38:Y:11034408-C-A | ** | |||||||
| hg19:Y:13221858-A-T hg38:Y:11066182-A-T | ** | |||||||
| hg19:Y:13234754-C-A hg38:Y:11079078-C-A | ** | |||||||
| hg19:Y:13234831-C-A hg38:Y:11079155-C-A | ** | |||||||
| hg19:Y:13234973-A-C hg38:Y:11079297-A-C | ** | |||||||
| hg19:Y:13255850-G-GT hg38:Y:11100174-G-GT | 8×T | ** | ||||||
| hg19:Y:13283001-C-A hg38:Y:11127325-C-A | ** | |||||||
| hg19:Y:13291376-C-A hg38:Y:11135700-C-A | ** | |||||||
| hg19:Y:13318974-C-A hg38:Y:11163298-C-A | ** | |||||||
| hg19:Y:13361498-C-A hg38:Y:11205822-C-A | ** | |||||||
| hg19:Y:13515944-A-C hg38:Y:11360268-A-C | ** | |||||||
| hg19:Y:13597180-CT-C hg38:Y:11441504-CT-C | ** | |||||||
| hg19:Y:13640020-C-A hg38:Y:11484344-C-A | ** | |||||||
| hg38:Y:11646771-G-T | DYZ17 | ** | ||||||
| hg19:Y:13800847-T-C hg38:Y:11680141-T-C | DYZ17 | ** | ||||||
| hg19:Y:13856068-A-T hg38:Y:11735362-A-T | DYZ17 | ** | ||||||
| hg19:Y:13897453-C-A hg38:Y:11776747-C-A | ** | |||||||
| hg19:Y:13898516-C-G hg38:Y:11777810-C-G | ** | |||||||
| hg19:Y:14055017-C-A hg38:Y:11934311-C-A | ** | |||||||
| hg19:Y:14065524-A-C hg38:Y:11944818-A-C | ** | |||||||
| hg19:Y:14065576-T-G hg38:Y:11944870-T-G | ** | |||||||
| hg19:Y:14114918-T-A hg38:Y:11994212-T-A | ** | |||||||
| hg19:Y:14184447-AAG-C hg38:Y:12063741-AAG-C | ** | |||||||
| hg19:Y:14741657-G-T hg38:Y:12629725-G-T | ** | |||||||
| hg19:Y:14769241-A-C hg38:Y:12657310-A-C | ** | |||||||
| hg19:Y:14845483-C-A hg38:Y:12733549-C-A | ** | |||||||
| hg19:Y:14931806-C-A hg38:Y:12819871-C-A | ** | |||||||
| hg19:Y:15323680-G-T hg38:Y:13211798-G-T | ** | |||||||
| hg19:Y:15403612-C-A hg38:Y:13291732-C-A | ** | |||||||
| hg19:Y:15928702-CAAAAAAAA-C hg38:Y:13816822-CAAAAAAAA-C | 19×A | ** | ||||||
| hg19:Y:16001633-T-C hg38:Y:13889753-T-C | ** | |||||||
| hg19:Y:16044703-C-A hg38:Y:13932823-C-A | ** | |||||||
| hg19:Y:16220832-G-T hg38:Y:14108952-G-T | ** | |||||||
| hg19:Y:16270899-G-T hg38:Y:14159019-G-T | ** | |||||||
| hg19:Y:16344833-C-A hg38:Y:14232953-C-A | ** | |||||||
| hg19:Y:16344851-C-A hg38:Y:14232971-C-A | ** | |||||||
| hg19:Y:16522651-G-A hg38:Y:14410771-G-A | ** | |||||||
| hg19:Y:16692757-GAAAAA-G hg38:Y:14580877-GAAAAA-G | 27×A | ** | ||||||
| hg19:Y:16952636-C-A hg38:Y:14840756-C-A | ** | |||||||
| hg19:Y:17323502-A-G hg38:Y:15211622-A-G | ** | |||||||
| hg19:Y:17389905-A-C hg38:Y:15278025-A-C | ** | |||||||
| hg19:Y:17500879-G-T hg38:Y:15388999-G-T | ** | |||||||
| hg19:Y:17538135-A-C hg38:Y:15426255-A-C | ** | |||||||
| hg19:Y:17538141-A-C hg38:Y:15426261-A-C | ** | |||||||
| hg19:Y:17561676-C-A hg38:Y:15449796-C-A | ** | |||||||
| hg19:Y:17605479-C-A hg38:Y:15493599-C-A | ** | |||||||
| hg19:Y:17717064-C-A hg38:Y:15605184-C-A | ** | |||||||
| hg19:Y:17798765-T-G hg38:Y:15686885-T-G | ** | |||||||
| hg19:Y:18297877-T-TG hg38:Y:16185997-T-TG | P6_Prx | ** | ||||||
| hg19:Y:18309275-A-G hg38:Y:16197395-A-G | P6_Prx | ** | ||||||
| hg19:Y:18340451-A-T hg38:Y:16228571-A-T | P6_Prx | ** | ||||||
| hg19:Y:18401199-CAAA-C hg38:Y:16289319-CAAA-C | P6_Gap | 30×A | ** | |||||
| hg19:Y:18892466-T-G hg38:Y:16780586-T-G | ** | |||||||
| hg19:Y:19330823-G-T hg38:Y:17218943-G-T | ** | |||||||
| hg19:Y:19460364-C-A hg38:Y:17348484-C-A | ** | |||||||
| hg19:Y:19479249-A-C hg38:Y:17367369-A-C | ** | |||||||
| hg19:Y:19792533-C-A hg38:Y:17680653-C-A | P5_Prx | ** | ||||||
| hg19:Y:19792544-T-A hg38:Y:17680664-T-A | P5_Prx | ** | ||||||
| hg19:Y:19792554-G-T hg38:Y:17680674-G-T | P5_Prx | ** | ||||||
| hg19:Y:19792562-T-A hg38:Y:17680682-T-A | P5_Prx | ** | ||||||
| hg19:Y:19792566-C-A hg38:Y:17680686-C-A | P5_Prx | ** | ||||||
| hg19:Y:19893281-T-A hg38:Y:17781401-T-A | P5_Prx | ** | ||||||
| hg19:Y:19983334-A-T hg38:Y:17871454-A-T | P5_Prx | ** | ||||||
| hg19:Y:20266125-A-AGT hg38:Y:18104239-A-AGT | P5_Dst | ** | ||||||
| hg19:Y:20404477-C-G hg38:Y:18242591-C-G | P5_Dst | ** | ||||||
| hg19:Y:20416997-G-T hg38:Y:18255111-G-T | P5_Dst | ** | ||||||
| hg19:Y:20417030-A-T hg38:Y:18255144-A-T | P5_Dst | ** | ||||||
| hg19:Y:20417041-C-A hg38:Y:18255155-C-A | P5_Dst | ** | ||||||
| hg19:Y:20417047-C-A hg38:Y:18255161-C-A | P5_Dst | ** | ||||||
| hg19:Y:20631066-C-A hg38:Y:18469180-C-A | P4_Prx | ** | ||||||
| hg19:Y:20641655-A-C hg38:Y:18479769-A-C | P4_Prx | ** | ||||||
| hg19:Y:20698901-T-A hg38:Y:18537015-T-A | P4_Prx | ** | ||||||
| hg19:Y:20698931-T-A hg38:Y:18537045-T-A | P4_Prx | ** | ||||||
| hg19:Y:20729903-A-C hg38:Y:18568017-A-C | P4_Prx | ** | ||||||
| hg19:Y:21109781-A-C hg38:Y:18947895-A-C | ** | |||||||
| hg19:Y:21234837-T-C hg38:Y:19072951-T-C | ** | |||||||
| hg19:Y:21247669-G-T hg38:Y:19085783-G-T | ** | |||||||
| hg19:Y:21394559-T-C hg38:Y:19232673-T-C | ** | |||||||
| hg19:Y:21409036-C-A hg38:Y:19247150-C-A | ** | |||||||
| hg19:Y:21457740-A-C hg38:Y:19295854-A-C | ** | |||||||
| hg19:Y:21512488-T-A hg38:Y:19350602-T-A | ** | |||||||
| hg19:Y:21831047-T-A hg38:Y:19669161-T-A | ** | |||||||
| hg19:Y:21950111-AT-A hg38:Y:19788225-AT-A | ** | |||||||
| hg19:Y:21968072-C-A hg38:Y:19806186-C-A | ** | |||||||
| hg19:Y:21985091-CACTGACA-C hg38:Y:19823205-CACTGACA-C | ** | |||||||
| hg19:Y:22238546-T-C hg38:Y:20076660-T-C | DYZ19 | ** | ** | |||||
| hg19:Y:22665981-C-A hg38:Y:20504095-C-A | ** | |||||||
| hg19:Y:22810778-C-A hg38:Y:20648892-C-A | ** | |||||||
| hg19:Y:22950047-T-G hg38:Y:20788161-T-G | ** | |||||||
| hg19:Y:22988509-C-A hg38:Y:20826623-C-A | ** | |||||||
| hg19:Y:23102189-T-G hg38:Y:20940303-T-G | ** | |||||||
| hg19:Y:23137253-C-A hg38:Y:20975367-C-A | ** | |||||||
| hg19:Y:23293603-TA-T hg38:Y:21131717-TA-T | ** | |||||||
| hg19:Y:23719451-T-G hg38:Y:21557565-T-G | ** | |||||||
| hg19:Y:23719513-A-C hg38:Y:21557627-A-C | ** | |||||||
| hg19:Y:23773640-G-T hg38:Y:21611754-G-T | ** | |||||||
| hg19:Y:23802265-T-A hg38:Y:21640379-T-A | ** | |||||||
| hg19:Y:23892271-A-T hg38:Y:21730385-A-T | ** | |||||||
| hg19:Y:23997480-T-G hg38:Y:21851333-T-G | ** | |||||||
| hg19:Y:24304104-G-C hg38:Y:22157957-G-C | P3_t1 | ** | ||||||
| hg19:Y:24304119-T-G hg38:Y:22157972-T-G | P3_t1 | ** | ||||||
| hg19:Y:24304154-T-G hg38:Y:22158007-T-G | P3_t1 | ** | ||||||
| hg19:Y:25728076-GT-G hg38:Y:23581929-GT-G | P1_b3 | ** | ||||||
| hg19:Y:25892238-C-A hg38:Y:23746091-C-A | P1_Y1 | ** | ||||||
| hg19:Y:25892260-T-G hg38:Y:23746113-T-G | P1_Y1 | ** | ||||||
| hg19:Y:25931540-A-T hg38:Y:23785393-A-T | P1_Y1 | ** | ||||||
| hg19:Y:25931544-A-T hg38:Y:23785397-A-T | P1_Y1 | ** | ||||||
| hg19:Y:25931550-A-T hg38:Y:23785403-A-T | P1_Y1 | ** | ||||||
| hg19:Y:26075410-C-A hg38:Y:23929263-C-A | P1_Y1 | ** | ||||||
| hg19:Y:26075445-C-A hg38:Y:23929298-C-A | P1_Y1 | ** | ||||||
| hg19:Y:26075465-G-T hg38:Y:23929318-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26075483-G-T hg38:Y:23929336-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26075491-G-T hg38:Y:23929344-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26161165-G-T hg38:Y:24015018-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26355367-C-A hg38:Y:24209220-C-A | P1_Y1 | ** | ||||||
| hg19:Y:26355433-C-A hg38:Y:24209286-C-A | P1_Y1 | ** | ||||||
| hg19:Y:26386516-G-T hg38:Y:24240369-G-T | P1_Y1 | ** | ||||||
| hg19:Y:26626651-C-A hg38:Y:24480504-C-A | P1_g2 | ** | ||||||
| hg19:Y:27077134-T-A hg38:Y:24930987-T-A | P1_r4 | ** | ||||||
| hg19:Y:27077150-G-T hg38:Y:24931003-G-T | P1_r4 | ** | ||||||
| hg19:Y:28081885-C-CAA hg38:Y:25935738-C-CAA | P1_Y2 | ** | ||||||
| hg19:Y:28432584-C-A hg38:Y:26286437-C-A | P1_gr2 | ** | ||||||
| hg19:Y:28460826-C-A hg38:Y:26314679-C-A | ** | |||||||
| hg19:Y:28511091-T-C hg38:Y:26364944-T-C | ** | |||||||
| hg19:Y:28812172-G-T hg38:Y:26666025-G-T | ** | |||||||
| hg38:Y:56843826-G-A | ** | |||||||
| hg38:Y:56846194-C-A | ** | |||||||
| hg38:Y:56848591-C-A | ** | |||||||
| hg38:Y:56849016-C-T | ** | |||||||
| hg19:Y:18728738-CAGAG-C hg38:Y:16616858-CAGAG-C | 10×AG | ** | ||||||
| hg19:Y:13468879-G-C hg38:Y:11313203-G-C | ** | |||||||
| hg19:Y:26250773-C-A hg38:Y:24104626-C-A | P1_Y1 | ** | ||||||
| hg38:Y:10629031-C-T | ** | |||||||
| hg19:Y:3963907-T-C hg38:Y:4095866-T-C | ** | |||||||
| hg19:Y:4181046-C-T hg38:Y:4313005-C-T | ** | |||||||
| hg19:Y:4786447-A-C hg38:Y:4918406-A-C | ** | |||||||
| hg19:Y:6641147-G-GT hg38:Y:6773106-G-GT | ** | |||||||
| hg19:Y:7717743-T-C hg38:Y:7849702-T-C | ** | |||||||
| hg19:Y:15148462-G-A hg38:Y:13036549-G-A | ** | |||||||
| hg19:Y:19673737-G-T hg38:Y:17561857-G-T | P5_Prx | ** | ||||||
| hg19:Y:19686155-G-A hg38:Y:17574275-G-A | P5_Prx | ** | ||||||
| hg19:Y:19947118-G-A hg38:Y:17835238-G-A | P5_Prx | ** | ||||||
| hg19:Y:24386060-TAT-A hg38:Y:22239913-TAT-A | ** | |||||||
| hg19:Y:26250744-G-T hg38:Y:24104597-G-T | P1_Y1 | ** | ||||||
| hg19:Y:28477810-G-A hg38:Y:26331663-G-A | ** | |||||||
| hg19:Y:22537651-C-A hg38:Y:20375765-C-A | *** | |||||||
| hg19:Y:18959214-CAAA-C,CAA hg38:Y:16847334-CAAA-C,CAA | 27×A | *** | ||||||
| hg19:Y:13457710-AGTGTTGATTC-A hg38:Y:11302034-AGTGTTGATTC-A | *** | |||||||
| hg19:Y:4503102-G-T hg38:Y:4635061-G-T | *** | |||||||
| hg19:Y:2758861-AG-AT,G hg38:Y:2890820-AG-AT,G | *** | |||||||
| hg19:Y:2903232-CTCCTTCCTTCCT-C,CTCCTTCCT hg38:Y:3035191-CTCCTTCCTTCCT-C,CTCCTTCCT | 18×TCCT | *** | ||||||
| hg19:Y:5022019-AAAA-A,AAAG hg38:Y:5153978-AAAA-A,AAAG | *** | |||||||
| hg19:Y:8816362-G-A hg38:Y:8948321-G-A | *** | |||||||
| hg19:Y:8913140-A-G hg38:Y:9045099-A-G | *** | |||||||
| hg19:Y:9941359-C-T hg38:Y:10103750-C-T | *** | |||||||
| hg19:Y:10013891-C-A hg38:Y:10176282-C-A | *** | |||||||
| hg38:Y:10648027-C-A | *** | |||||||
| hg38:Y:11668364-G-A | DYZ17 | *** | ||||||
| hg19:Y:13940857-AAGAG-A,AAGAGAG hg38:Y:11820151-AAGAG-A,AAGAGAG | 18×AG | *** | ||||||
| hg19:Y:14926484-AAAAAG-A hg38:Y:12814549-AAAAAG-A | *** | |||||||
| hg19:Y:15249067-G-GA hg38:Y:13137153-G-GA | *** | |||||||
| hg19:Y:18263949-GT-G hg38:Y:16152069-GT-G | *** | |||||||
| hg19:Y:13468913-T-A hg38:Y:11313237-T-A | *** | |||||||
| hg19:Y:13468926-CT-C hg38:Y:11313250-CT-C | *** | |||||||
| hg19:Y:21367845-G-A hg38:Y:19205959-G-A | *** | |||||||
| hg19:Y:6120234-C-CAT,CATAT hg38:Y:6252193-C-CAT,CATAT | 14×AT | *** | ||||||
| hg19:Y:13292229-T-TC hg38:Y:11136553-T-TC | 9×C | *** | ||||||
| hg19:Y:21762487-A-G hg38:Y:19600601-A-G | *** | |||||||
| hg19:Y:13376384-T-C hg38:Y:11220708-T-C | *** | |||||||
| hg19:Y:3603491-ATTTTTT-A,ATTT hg38:Y:3735450-ATTTTTT-A,ATTT | 24×T | *** | ||||||
| hg19:Y:7966782-T-C hg38:Y:8098741-T-C | *** | |||||||
| hg19:Y:8124920-TAAA-T,TAAAA hg38:Y:8256879-TAAA-T,TAAAA | 15×A | *** | ||||||
| hg19:Y:8741692-A-G hg38:Y:8873651-A-G | *** | |||||||
| hg19:Y:8812193-T-C hg38:Y:8944152-T-C | *** | |||||||
| hg19:Y:9354156-T-C hg38:Y:9516547-T-C | *** | |||||||
| hg19:Y:10063753-GC-G hg38:Y:10226144-GC-G | *** | |||||||
| hg38:Y:10837828-T-A | *** | |||||||
| hg19:Y:13222398-A-G hg38:Y:11066722-A-G | *** | |||||||
| hg19:Y:13376391-T-C hg38:Y:11220715-T-C | *** | |||||||
| hg19:Y:17006471-T-TTA hg38:Y:14894591-T-TTA | *** | |||||||
| hg19:Y:18165741-T-G hg38:Y:16053861-T-G | *** | |||||||
| hg19:Y:18767164-T-A hg38:Y:16655284-T-A | *** | |||||||
| hg19:Y:23015454-TA-T hg38:Y:20853568-TA-T | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 331647 | 10016780 | 8127557 | 7982167 |
| Kit: 331647 | 15534823 | 9754082 | 8397951 |
| Used in age calculations | 15534823 | 9754082 | 8397951 |
| Counts of SNPs | 18 | 15 |
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