Brown
BigY2: 286386Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 286386 |
---|---|---|---|---|---|---|---|
hg19:Y:13687062-G-T hg38:Y:11531386-G-T | DYZ17 | A* | |||||
hg19:Y:14025610-G-GAA hg38:Y:11904904-G-GAA | ** | ||||||
hg19:Y:18982547-C-CA hg38:Y:16870667-C-CA | 39×A | ** | |||||
hg19:Y:15904168-A-C hg38:Y:13792288-A-C | CTS4923 | 8×AC | ** | ||||
hg19:Y:23471057-AG-A hg38:Y:21309171-AG-A | ** | ||||||
hg19:Y:13298547-C-A hg38:Y:11142871-C-A | ** | ||||||
hg19:Y:4455063-TAC-T hg38:Y:4587022-TAC-T | ** | ||||||
hg19:Y:16038193-C-A hg38:Y:13926313-C-A | FT312455 | ** | |||||
hg19:Y:18951779-GTAA-G hg38:Y:16839899-GTAA-G | 5×TAA | ** | |||||
hg19:Y:6133208-T-G hg38:Y:6265167-T-G | ** | ||||||
hg19:Y:8020221-CAAAA-C hg38:Y:8152180-CAAAA-C | 22×A | ** | |||||
hg19:Y:13522059-G-T hg38:Y:11366383-G-T | ** | ||||||
hg38:Y:10834089-T-G | ** | ||||||
hg19:Y:15230964-T-. hg38:Y:13119050-G-T | ** | ||||||
hg38:Y:10935969-C-A | ** | ||||||
hg19:Y:17323484-G-A hg38:Y:15211604-G-A | ** | ||||||
hg19:Y:17323492-G-A hg38:Y:15211612-G-A | ** | ||||||
hg19:Y:17323494-A-G hg38:Y:15211614-A-G | ** | ||||||
hg19:Y:15939192-C-A hg38:Y:13827312-C-A | ** | ||||||
hg19:Y:14440839-C-A hg38:Y:12320112-C-A | ** | ||||||
hg19:Y:2845221-CAAA-C hg38:Y:2977180-CAAA-C | 38×A | ** | |||||
hg38:Y:10944748-C-A | ** | ||||||
hg38:Y:10788237-A-T | ** | ||||||
hg19:Y:9063859-CTTTTT-C hg38:Y:9226250-CTTTTT-C | 16×T | ** | |||||
hg38:Y:11038190-C-A | ** | ||||||
hg19:Y:7152620-C-A hg38:Y:7284579-C-A | ** | ||||||
hg38:Y:10826443-C-T | ** | ||||||
hg38:Y:10826451-C-T | FT432931 | ** | |||||
hg19:Y:19924662-T-TA hg38:Y:17812782-T-TA | P5_Prx | ** | |||||
hg38:Y:10767826-C-A | ** | ||||||
hg38:Y:10892837-T-C | ** | ||||||
hg38:Y:10892850-C-A | ** | ||||||
hg38:Y:10892857-A-C | ** | ||||||
hg38:Y:10826487-T-A | ** | ||||||
hg38:Y:10826494-G-C | ** | ||||||
hg38:Y:10770510-T-C | ** | ||||||
hg19:Y:15103742-C-A hg38:Y:12991830-C-A | ** | ||||||
hg38:Y:10987925-A-G | ** | ||||||
hg38:Y:10912851-G-C | FT73605 | ** | |||||
hg38:Y:10969253-C-T | ** | ||||||
hg38:Y:10969255-C-A | ** | ||||||
hg19:Y:19663425-G-T hg38:Y:17551545-G-T | P5_Prx | ** | |||||
hg19:Y:22088971-C-A hg38:Y:19927085-C-A | ** | ||||||
hg38:Y:10688986-G-A | ** | ||||||
hg19:Y:4077785-C-A hg38:Y:4209744-C-A | ** | ||||||
hg38:Y:10993168-C-A | ** | ||||||
hg19:Y:23473269-G-GT hg38:Y:21311383-G-GT | 9×T | ** | |||||
hg38:Y:11011395-G-A | FT439907 | ** | |||||
hg19:Y:2790303-C-CTTT hg38:Y:2922262-C-CTTT | 15×T | ** | |||||
hg19:Y:7286981-C-A hg38:Y:7418940-C-A | ** | ||||||
hg19:Y:13229732-C-A hg38:Y:11074056-C-A | ** | ||||||
hg38:Y:10781253-C-A | ** | ||||||
hg38:Y:10657769-C-T | ** | ||||||
hg19:Y:4889762-C-A hg38:Y:5021721-C-A | ** | ||||||
hg19:Y:2865177-C-A hg38:Y:2997136-C-A | ** | ||||||
hg38:Y:10857678-C-A | ** | ||||||
hg19:Y:18605340-C-A hg38:Y:16493460-C-A | ** | ||||||
hg19:Y:21266785-C-A hg38:Y:19104899-C-A | ** | ||||||
hg19:Y:28556274-T-G hg38:Y:26410127-T-G | ** | ||||||
hg19:Y:10026704-G-T hg38:Y:10189095-G-T | FT376499 | ** | |||||
hg19:Y:18050613-C-A hg38:Y:15938733-C-A | ** | ||||||
hg19:Y:24446995-C-A hg38:Y:22300848-C-A | ** | ||||||
hg38:Y:10824169-T-A | ** | ||||||
hg19:Y:2768228-G-T hg38:Y:2900187-G-T | YFS2836858 | ** | |||||
hg38:Y:10792762-C-G | ** | ||||||
hg38:Y:10876922-C-A | ** | ||||||
hg38:Y:10824183-A-T | ** | ||||||
hg19:Y:13902225-C-A hg38:Y:11781519-C-A | ** | ||||||
hg38:Y:11657649-A-T | DYZ17 | ** | |||||
hg38:Y:10893275-C-A | ** | ||||||
hg19:Y:18249848-C-A hg38:Y:16137968-C-A | ** | ||||||
hg19:Y:2824510-C-A hg38:Y:2956469-C-A | ** | ||||||
hg19:Y:2845190-C-A hg38:Y:2977149-C-A | FTB79463 | ** | |||||
hg19:Y:2855557-A-G hg38:Y:2987516-A-G | ** | ||||||
hg19:Y:2970832-T-A hg38:Y:3102791-T-A | ** | ||||||
hg19:Y:3100954-A-G hg38:Y:3232913-A-G | ** | ||||||
hg19:Y:3113851-C-A hg38:Y:3245810-C-A | ** | ||||||
hg19:Y:3154098-C-A hg38:Y:3286057-C-A | ** | ||||||
hg19:Y:3165251-G-T hg38:Y:3297210-G-T | ** | ||||||
hg19:Y:3172736-T-C hg38:Y:3304695-T-C | ** | ||||||
hg19:Y:3178397-C-T hg38:Y:3310356-C-T | ** | ||||||
hg19:Y:3186741-C-CAA hg38:Y:3318700-C-CAA | 15×A | ** | |||||
hg19:Y:3432362-G-T hg38:Y:3564321-G-T | ** | ||||||
hg19:Y:3459713-G-T hg38:Y:3591672-G-T | ** | ||||||
hg19:Y:3486444-A-T hg38:Y:3618403-A-T | ** | ||||||
hg19:Y:3657198-T-G hg38:Y:3789157-T-G | ** | ||||||
hg19:Y:4107911-T-G hg38:Y:4239870-T-G | ** | ||||||
hg19:Y:4241421-G-A hg38:Y:4373380-G-A | ** | ||||||
hg19:Y:4242991-T-G hg38:Y:4374950-T-G | ** | ||||||
hg19:Y:4243340-C-A hg38:Y:4375299-C-A | ** | ||||||
hg19:Y:4365761-C-A hg38:Y:4497720-C-A | ** | ||||||
hg19:Y:4480168-G-T hg38:Y:4612127-G-T | ** | ||||||
hg19:Y:5112751-G-T hg38:Y:5244710-G-T | ** | ||||||
hg19:Y:5241570-A-T hg38:Y:5373529-A-T | ** | ||||||
hg19:Y:5421963-GA-G hg38:Y:5553922-GA-G | ** | ||||||
hg19:Y:5684244-G-T hg38:Y:5816203-G-T | ** | ||||||
hg19:Y:5800011-C-A hg38:Y:5931970-C-A | ** | ||||||
hg19:Y:6129066-C-A hg38:Y:6261025-C-A | ** | ||||||
hg19:Y:6129074-A-T hg38:Y:6261033-A-T | ** | ||||||
hg19:Y:6129082-C-A hg38:Y:6261041-C-A | ** | ||||||
hg19:Y:6213691-T-G hg38:Y:6345650-T-G | IR3_Dst | ** | |||||
hg19:Y:6520046-A-C hg38:Y:6652005-A-C | ** | ||||||
hg19:Y:6809292-G-A hg38:Y:6941251-G-A | ** | ||||||
hg19:Y:6878850-C-A hg38:Y:7010809-C-A | ** | ||||||
hg19:Y:6918316-C-T hg38:Y:7050275-C-T | ** | ||||||
hg19:Y:6922724-C-A hg38:Y:7054683-C-A | ** | ||||||
hg19:Y:7042709-C-A hg38:Y:7174668-C-A | ** | ||||||
hg19:Y:7043064-C-G hg38:Y:7175023-C-G | ** | ||||||
hg19:Y:7045804-C-A hg38:Y:7177763-C-A | ** | ||||||
hg19:Y:7093155-A-C hg38:Y:7225114-A-C | ** | ||||||
hg19:Y:7132178-C-A hg38:Y:7264137-C-A | ** | ||||||
hg19:Y:7148289-G-T hg38:Y:7280248-G-T | ** | ||||||
hg19:Y:7239094-T-A hg38:Y:7371053-T-A | ** | ||||||
hg19:Y:7313646-C-G hg38:Y:7445605-C-G | ** | ||||||
hg19:Y:7313647-C-A hg38:Y:7445606-C-A | ** | ||||||
hg19:Y:7313650-A-G hg38:Y:7445609-A-G | ** | ||||||
hg19:Y:7313654-G-A hg38:Y:7445613-G-A | ** | ||||||
hg19:Y:7349300-G-C hg38:Y:7481259-G-C | ** | ||||||
hg19:Y:7356339-T-G hg38:Y:7488298-T-G | ** | ||||||
hg19:Y:7445210-T-G hg38:Y:7577169-T-G | ** | ||||||
hg19:Y:7456824-C-T hg38:Y:7588783-C-T | IR1_L | ** | |||||
hg19:Y:7463919-G-T hg38:Y:7595878-G-T | IR1_L | ** | |||||
hg19:Y:7626198-T-TTG hg38:Y:7758157-T-TTG | ** | ||||||
hg19:Y:7709285-C-T hg38:Y:7841244-C-T | ** | ||||||
hg19:Y:7717856-T-G hg38:Y:7849815-T-G | ** | ||||||
hg19:Y:7758302-A-C hg38:Y:7890261-A-C | ** | ||||||
hg19:Y:7832064-C-A hg38:Y:7964023-C-A | ** | ||||||
hg19:Y:7984383-C-G hg38:Y:8116342-C-G | ** | ||||||
hg19:Y:8156064-C-A hg38:Y:8288023-C-A | ** | ||||||
hg19:Y:8288665-A-C hg38:Y:8420624-A-C | ** | ||||||
hg19:Y:8288670-A-C hg38:Y:8420629-A-C | ** | ||||||
hg19:Y:8697373-A-T hg38:Y:8829332-A-T | ** | ||||||
hg19:Y:8980526-G-T hg38:Y:9142917-G-T | ** | ||||||
hg19:Y:9088988-C-A hg38:Y:9251379-C-A | ** | ||||||
hg19:Y:9836886-GTGTT-G hg38:Y:9999277-GTGTT-G | ** | ||||||
hg19:Y:9913901-T-C hg38:Y:10076292-T-C | ** | ||||||
hg19:Y:10019589-C-A hg38:Y:10181980-C-A | ** | ||||||
hg19:Y:10074054-A-C hg38:Y:10236445-A-C | ** | ||||||
hg38:Y:10664786-A-C | ** | ||||||
hg38:Y:10672406-CTCCATTCCACTCCTCTCCCCTCTAT-C | ** | ||||||
hg38:Y:10682608-TTCGA-T | ** | ||||||
hg38:Y:10682782-TGCATC-T | ** | ||||||
hg38:Y:10683518-T-A | ** | ||||||
hg38:Y:10687197-G-A | ** | ||||||
hg38:Y:10687201-TCCATG-T | ** | ||||||
hg38:Y:10687215-TTCTGC-T | ** | ||||||
hg38:Y:10691307-G-T | ** | ||||||
hg38:Y:10746741-T-C | ** | ||||||
hg38:Y:10750778-TCATTCCATTCCATTCCATTC-T | ** | ||||||
hg38:Y:10754182-C-A | ** | ||||||
hg38:Y:10761603-C-A | ** | ||||||
hg38:Y:10762992-TTTCCATTCCACTCCA-T | ** | ||||||
hg38:Y:10763010-C-T | ** | ||||||
hg38:Y:10766389-T-G | ** | ||||||
hg38:Y:10766437-C-A | ** | ||||||
hg38:Y:10768740-T-C | ** | ||||||
hg38:Y:10770503-C-CTTTTT | ** | ||||||
hg38:Y:10778543-C-A | ** | ||||||
hg38:Y:10778638-C-A | ** | ||||||
hg38:Y:10781154-T-G | ** | ||||||
hg38:Y:10783262-A-T | ** | ||||||
hg38:Y:10785565-C-T | ** | ||||||
hg38:Y:10788228-T-A | ** | ||||||
hg38:Y:10792454-C-A | ** | ||||||
hg38:Y:10792745-T-C | ** | ||||||
hg38:Y:10792748-C-CATTTA | ** | ||||||
hg38:Y:10792752-C-CCACTA | ** | ||||||
hg38:Y:10792763-C-CACTCT | ** | ||||||
hg38:Y:10792784-A-C | ** | ||||||
hg38:Y:10792789-A-T | ** | ||||||
hg38:Y:10793096-A-T | ** | ||||||
hg38:Y:10796682-CA-T | ** | ||||||
hg38:Y:10804080-T-G | ** | ||||||
hg38:Y:10804458-C-G | ** | ||||||
hg38:Y:10804485-A-C | ** | ||||||
hg38:Y:10804487-TCCACGCCCC-T | ** | ||||||
hg38:Y:10815004-C-A | ** | ||||||
hg38:Y:10816279-C-T | ** | ||||||
hg38:Y:10824185-T-TCCTCTAATCC | ** | ||||||
hg38:Y:10831796-C-A | ** | ||||||
hg38:Y:10835186-C-A | ** | ||||||
hg38:Y:10841024-T-G | ** | ||||||
hg38:Y:10841025-TC-T | ** | ||||||
hg38:Y:10863026-C-A | ** | ||||||
hg38:Y:10892811-A-ATTCC | ** | ||||||
hg38:Y:10892829-C-G | ** | ||||||
hg38:Y:10895115-C-A | ** | ||||||
hg38:Y:10895269-G-T | FGC77247 | ** | |||||
hg38:Y:10914189-C-A | ** | ||||||
hg38:Y:10929870-A-C | ** | ||||||
hg38:Y:10929984-CATTCT-C | ** | ||||||
hg38:Y:10933177-T-G | ** | ||||||
hg38:Y:10933184-C-A | ** | ||||||
hg38:Y:10937172-C-A | ** | ||||||
hg38:Y:10947042-T-A | ** | ||||||
hg38:Y:10955196-C-G | ** | ||||||
hg38:Y:10964391-C-A | ** | ||||||
hg38:Y:10977514-C-A | ** | ||||||
hg38:Y:10984220-C-A | ** | ||||||
hg38:Y:10987154-C-A | ** | ||||||
hg38:Y:10987157-C-CATTCA | ** | ||||||
hg38:Y:10989110-A-G | ** | ||||||
hg38:Y:10989808-A-C | ** | ||||||
hg38:Y:10991072-T-G | ** | ||||||
hg38:Y:10991417-C-A | ** | ||||||
hg38:Y:10994771-C-A | ** | ||||||
hg38:Y:10995293-C-T | ** | ||||||
hg38:Y:10997913-C-A | ** | ||||||
hg38:Y:11004413-T-TGATA | ** | ||||||
hg38:Y:11004435-C-T | ** | ||||||
hg38:Y:11020171-T-G | ** | ||||||
hg38:Y:11026687-T-A | ** | ||||||
hg38:Y:11034706-C-A | ** | ||||||
hg19:Y:13318023-G-T hg38:Y:11162347-G-T | ** | ||||||
hg19:Y:13321874-G-A hg38:Y:11166198-G-A | ** | ||||||
hg19:Y:13322305-C-A hg38:Y:11166629-C-A | ** | ||||||
hg19:Y:13634053-C-A hg38:Y:11478377-C-A | ** | ||||||
hg19:Y:13643014-C-T hg38:Y:11487338-C-T | ** | ||||||
hg19:Y:13696722-T-G hg38:Y:11541046-T-G | DYZ17 | ** | |||||
hg19:Y:13696947-A-T hg38:Y:11541271-A-T | DYZ17 | ** | |||||
hg19:Y:13696964-G-T hg38:Y:11541288-G-T | DYZ17 | ** | |||||
hg38:Y:11654803-G-A | DYZ17 | ** | |||||
hg38:Y:11665712-A-C | DYZ17 | ** | |||||
hg38:Y:11667816-A-G | DYZ17 | ** | |||||
hg38:Y:11670910-A-G | DYZ17 | ** | |||||
hg19:Y:13847209-AAATGG-A hg38:Y:11726503-AAATGG-A | DYZ17 | 4×AATGG | ** | ||||
hg19:Y:13847231-CTCAAATGGAATGGAATGGAA-C hg38:Y:11726525-CTCAAATGGAATGGAATGGAA-C | DYZ17 | ** | |||||
hg19:Y:13871948-A-C hg38:Y:11751242-A-C | ** | ||||||
hg19:Y:13907726-C-A hg38:Y:11787020-C-A | ** | ||||||
hg19:Y:13939918-A-G hg38:Y:11819212-A-G | ** | ||||||
hg19:Y:13939922-C-T hg38:Y:11819216-C-T | ** | ||||||
hg19:Y:13974808-T-A hg38:Y:11854102-T-A | ** | ||||||
hg19:Y:14030824-C-A hg38:Y:11910118-C-A | ** | ||||||
hg19:Y:14212064-C-A hg38:Y:12091358-C-A | ** | ||||||
hg19:Y:14233258-C-CT hg38:Y:12112552-C-CT | 8×T | ** | |||||
hg19:Y:14291683-C-A hg38:Y:12170977-C-A | ** | ||||||
hg19:Y:14358072-G-T hg38:Y:12237367-G-T | ** | ||||||
hg19:Y:14361497-T-G hg38:Y:12240792-T-G | ** | ||||||
hg19:Y:14418950-C-A hg38:Y:12298225-C-A | ** | ||||||
hg19:Y:14435548-A-C hg38:Y:12314821-A-C | ** | ||||||
hg19:Y:14435564-T-G hg38:Y:12314837-T-G | ** | ||||||
hg19:Y:14435585-T-G hg38:Y:12314858-T-G | ** | ||||||
hg19:Y:14435611-A-C hg38:Y:12314884-A-C | ** | ||||||
hg19:Y:14507608-C-A hg38:Y:12395813-C-A | ** | ||||||
hg19:Y:14512529-C-A hg38:Y:12400734-C-A | ** | ||||||
hg19:Y:14513310-T-G hg38:Y:12401515-T-G | ** | ||||||
hg19:Y:14548187-C-A hg38:Y:12436388-C-A | ** | ||||||
hg19:Y:14555160-C-A hg38:Y:12443361-C-A | ** | ||||||
hg19:Y:14578476-C-A hg38:Y:12466676-C-A | ** | ||||||
hg19:Y:14610576-TC-T hg38:Y:12498778-TC-T | ** | ||||||
hg19:Y:14715962-C-A hg38:Y:12604029-C-A | ** | ||||||
hg19:Y:14755536-G-A hg38:Y:12643605-G-A | ** | ||||||
hg19:Y:14795079-TC-T hg38:Y:12683150-TC-T | ** | ||||||
hg19:Y:14880454-C-A hg38:Y:12768524-C-A | ** | ||||||
hg19:Y:14919264-C-A hg38:Y:12807331-C-A | ** | ||||||
hg19:Y:14962466-G-A hg38:Y:12850541-G-A | ** | ||||||
hg19:Y:15059614-C-A hg38:Y:12947706-C-A | ** | ||||||
hg19:Y:15065808-C-A hg38:Y:12953900-C-A | ** | ||||||
hg19:Y:15074550-G-T hg38:Y:12962640-G-T | ** | ||||||
hg19:Y:15218659-A-C hg38:Y:13106745-A-C | ** | ||||||
hg19:Y:15338789-C-A hg38:Y:13226907-C-A | ** | ||||||
hg19:Y:15387900-A-T hg38:Y:13276020-A-T | ** | ||||||
hg19:Y:15410633-CAAAA-C hg38:Y:13298753-CAAAA-C | 28×A | ** | |||||
hg19:Y:15428306-A-C hg38:Y:13316426-A-C | ** | ||||||
hg19:Y:15588597-C-A hg38:Y:13476717-C-A | ** | ||||||
hg19:Y:15735286-C-A hg38:Y:13623406-C-A | ** | ||||||
hg19:Y:15770363-C-A hg38:Y:13658483-C-A | ** | ||||||
hg19:Y:15792781-T-G hg38:Y:13680901-T-G | ** | ||||||
hg19:Y:15842384-TA-T hg38:Y:13730504-TA-T | 10×A | ** | |||||
hg19:Y:16002620-C-A hg38:Y:13890740-C-A | ** | ||||||
hg19:Y:16008124-C-A hg38:Y:13896244-C-A | ** | ||||||
hg19:Y:16038157-T-A hg38:Y:13926277-T-A | ** | ||||||
hg19:Y:16038170-C-T hg38:Y:13926290-C-T | ** | ||||||
hg19:Y:16038174-G-A hg38:Y:13926294-G-A | ** | ||||||
hg19:Y:16038176-C-A hg38:Y:13926296-C-A | ** | ||||||
hg19:Y:16038184-C-A hg38:Y:13926304-C-A | ** | ||||||
hg19:Y:16038185-A-G hg38:Y:13926305-A-G | ** | ||||||
hg19:Y:16038199-A-G hg38:Y:13926319-A-G | ** | ||||||
hg19:Y:16092498-C-A hg38:Y:13980618-C-A | ** | ||||||
hg19:Y:16094328-C-A hg38:Y:13982448-C-A | ** | ||||||
hg19:Y:16180215-C-A hg38:Y:14068335-C-A | ** | ||||||
hg19:Y:16253952-T-C hg38:Y:14142072-T-C | ** | ||||||
hg19:Y:16333148-T-C hg38:Y:14221268-T-C | ** | ||||||
hg19:Y:16437173-C-A hg38:Y:14325293-C-A | ** | ||||||
hg19:Y:16516274-G-T hg38:Y:14404394-G-T | ** | ||||||
hg19:Y:16553867-C-A hg38:Y:14441987-C-A | ** | ||||||
hg19:Y:16620631-T-G hg38:Y:14508751-T-G | ** | ||||||
hg19:Y:16691424-C-A hg38:Y:14579544-C-A | ** | ||||||
hg19:Y:16910484-C-A hg38:Y:14798604-C-A | ** | ||||||
hg19:Y:16962696-T-G hg38:Y:14850816-T-G | ** | ||||||
hg19:Y:17122516-G-T hg38:Y:15010636-G-T | ** | ||||||
hg19:Y:17326745-C-A hg38:Y:15214865-C-A | ** | ||||||
hg19:Y:17371096-A-G hg38:Y:15259216-A-G | ** | ||||||
hg19:Y:17428081-C-A hg38:Y:15316201-C-A | ** | ||||||
hg19:Y:17514026-G-T hg38:Y:15402146-G-T | ** | ||||||
hg19:Y:17691974-A-C hg38:Y:15580094-A-C | ** | ||||||
hg19:Y:17763860-C-A hg38:Y:15651980-C-A | ** | ||||||
hg19:Y:17776291-C-A hg38:Y:15664411-C-A | ** | ||||||
hg19:Y:17782455-T-G hg38:Y:15670575-T-G | ** | ||||||
hg19:Y:17874196-C-A hg38:Y:15762316-C-A | ** | ||||||
hg19:Y:17928538-C-A hg38:Y:15816658-C-A | ** | ||||||
hg19:Y:18036518-G-T hg38:Y:15924638-G-T | ** | ||||||
hg19:Y:18037797-G-T hg38:Y:15925917-G-T | ** | ||||||
hg19:Y:18195154-A-ATTT hg38:Y:16083274-A-ATTT | 29×T | ** | |||||
hg19:Y:18346598-C-A hg38:Y:16234718-C-A | P6_Prx | ** | |||||
hg19:Y:18539170-C-A hg38:Y:16427290-C-A | FT330892 | ** | |||||
hg19:Y:18539598-C-A hg38:Y:16427718-C-A | ** | ||||||
hg19:Y:18800477-G-T hg38:Y:16688597-G-T | ** | ||||||
hg19:Y:18800670-G-T hg38:Y:16688790-G-T | ** | ||||||
hg19:Y:18895179-C-A hg38:Y:16783299-C-A | ** | ||||||
hg19:Y:18955675-C-A hg38:Y:16843795-C-A | ** | ||||||
hg19:Y:18985979-G-T hg38:Y:16874099-G-T | FT54467 | ** | |||||
hg19:Y:19057931-G-A hg38:Y:16946051-G-A | ** | ||||||
hg19:Y:19073242-G-T hg38:Y:16961362-G-T | ** | ||||||
hg19:Y:19231342-TTGAGA-T hg38:Y:17119462-TTGAGA-T | ** | ||||||
hg19:Y:19244699-T-A hg38:Y:17132819-T-A | ** | ||||||
hg19:Y:19244712-A-G hg38:Y:17132832-A-G | ** | ||||||
hg19:Y:19256306-G-T hg38:Y:17144426-G-T | ** | ||||||
hg19:Y:19301430-T-A hg38:Y:17189550-T-A | ** | ||||||
hg19:Y:19304179-A-C hg38:Y:17192299-A-C | ** | ||||||
hg19:Y:19351100-C-A hg38:Y:17239220-C-A | ** | ||||||
hg19:Y:19479260-T-G hg38:Y:17367380-T-G | ** | ||||||
hg19:Y:19479281-A-C hg38:Y:17367401-A-C | ** | ||||||
hg19:Y:19557554-C-A hg38:Y:17445674-C-A | ** | ||||||
hg19:Y:19950226-G-C hg38:Y:17838346-G-C | P5_Prx | ** | |||||
hg19:Y:19950234-T-A hg38:Y:17838354-T-A | P5_Prx | ** | |||||
hg19:Y:19950251-T-A hg38:Y:17838371-T-A | P5_Prx | ** | |||||
hg19:Y:20125706-T-G hg38:Y:18013826-T-G | P5_Dst | ** | |||||
hg19:Y:20424912-G-T hg38:Y:18263026-G-T | P5_Dst | ** | |||||
hg19:Y:20629012-C-CG hg38:Y:18467126-C-CG | P4_Prx | ** | |||||
hg19:Y:20634526-A-C hg38:Y:18472640-A-C | P4_Prx | ** | |||||
hg19:Y:20839538-T-C hg38:Y:18677652-T-C | P4_Gap | ** | |||||
hg19:Y:20872407-T-A hg38:Y:18710521-T-A | P4_Dst | ** | |||||
hg19:Y:21072189-C-A hg38:Y:18910303-C-A | ** | ||||||
hg19:Y:21138769-G-A hg38:Y:18976883-G-A | FT356025 | 9×A | ** | ||||
hg19:Y:21152110-T-A hg38:Y:18990224-T-A | ** | ||||||
hg19:Y:21248665-G-T hg38:Y:19086779-G-T | ** | ||||||
hg19:Y:21285054-G-A hg38:Y:19123168-G-A | ** | ||||||
hg19:Y:21427083-C-A hg38:Y:19265197-C-A | Y106449 | ** | |||||
hg19:Y:21446212-C-A hg38:Y:19284326-C-A | ** | ||||||
hg19:Y:21476443-C-A hg38:Y:19314557-C-A | ** | ||||||
hg19:Y:21513766-C-A hg38:Y:19351880-C-A | ** | ||||||
hg19:Y:21556533-C-A hg38:Y:19394647-C-A | ** | ||||||
hg19:Y:21673004-C-A hg38:Y:19511118-C-A | ** | ||||||
hg19:Y:21987278-G-T hg38:Y:19825392-G-T | ** | ||||||
hg19:Y:22001891-T-G hg38:Y:19840005-T-G | ** | ||||||
hg19:Y:22052586-G-C hg38:Y:19890700-G-C | ** | ||||||
hg19:Y:22069664-C-A hg38:Y:19907778-C-A | ** | ||||||
hg19:Y:22201025-C-A hg38:Y:20039139-C-A | ** | ||||||
hg19:Y:22215353-T-G hg38:Y:20053467-T-G | ** | ||||||
hg19:Y:22602466-C-A hg38:Y:20440580-C-A | ** | ||||||
hg19:Y:22722496-C-A hg38:Y:20560610-C-A | ** | ||||||
hg19:Y:22868314-AG-A hg38:Y:20706428-AG-A | ** | ||||||
hg19:Y:22886395-C-A hg38:Y:20724509-C-A | ** | ||||||
hg19:Y:22904248-T-A hg38:Y:20742362-T-A | ** | ||||||
hg19:Y:22993299-C-A hg38:Y:20831413-C-A | ** | ||||||
hg19:Y:23041072-G-T hg38:Y:20879186-G-T | ** | ||||||
hg19:Y:23047681-T-A hg38:Y:20885795-T-A | ** | ||||||
hg19:Y:23205028-A-T hg38:Y:21043142-A-T | ** | ||||||
hg19:Y:23387888-C-A hg38:Y:21226002-C-A | ** | ||||||
hg19:Y:23417313-C-A hg38:Y:21255427-C-A | ** | ||||||
hg19:Y:23435778-C-G hg38:Y:21273892-C-G | ** | ||||||
hg19:Y:23649343-C-A hg38:Y:21487457-C-A | ** | ||||||
hg19:Y:23880474-C-A hg38:Y:21718588-C-A | ** | ||||||
hg38:Y:21754159-G-T | ** | ||||||
hg19:Y:24382020-C-T hg38:Y:22235873-C-T | ** | ||||||
hg19:Y:24432813-G-T hg38:Y:22286666-G-T | ** | ||||||
hg19:Y:24613957-TG-T hg38:Y:22467810-TG-T | P3_t2 | ** | |||||
hg19:Y:24660753-A-T hg38:Y:22514606-A-T | P3_b2 | ** | |||||
hg19:Y:24878724-C-A hg38:Y:22732577-C-A | g1 | ** | |||||
hg19:Y:25817240-T-TC hg38:Y:23671093-T-TC | P1_b3 | ** | |||||
hg19:Y:25880148-A-C hg38:Y:23734001-A-C | P1_Y1 | ** | |||||
hg19:Y:26167241-G-T hg38:Y:24021094-G-T | P1_Y1 | ** | |||||
hg19:Y:26167289-G-T hg38:Y:24021142-G-T | P1_Y1 | ** | |||||
hg19:Y:27180894-T-A hg38:Y:25034747-T-A | P1_g3 | ** | |||||
hg19:Y:27180905-C-A hg38:Y:25034758-C-A | P1_g3 | ** | |||||
hg19:Y:27180915-C-A hg38:Y:25034768-C-A | P1_g3 | ** | |||||
hg19:Y:27398504-C-G hg38:Y:25252357-C-G | P1_g3 | ** | |||||
hg19:Y:27466743-T-A hg38:Y:25320596-T-A | P1_Y2 | ** | |||||
hg19:Y:27576065-C-T hg38:Y:25429918-C-T | P1_Y2 | ** | |||||
hg19:Y:28687450-C-A hg38:Y:26541303-C-A | ** | ||||||
hg19:Y:28776815-T-G hg38:Y:26630668-T-G | ** | ||||||
hg38:Y:56756826-A-T | ** | ||||||
hg38:Y:56763472-C-G | ** | ||||||
hg38:Y:56763486-C-T | ** | ||||||
hg38:Y:56844597-G-T | ** | ||||||
hg38:Y:56850777-G-A | ** | ||||||
hg38:Y:56850784-A-G | ** | ||||||
hg38:Y:56850791-A-G | ** | ||||||
hg38:Y:56850805-G-A | ** | ||||||
hg38:Y:56850807-C-A | ** | ||||||
hg38:Y:56850810-T-A | ** | ||||||
hg19:Y:2798710-ATTTTT-A hg38:Y:2930669-ATTTTT-A | 20×T | *** | |||||
hg19:Y:18106353-GT-G,GTT hg38:Y:15994473-GT-G,GTT | 15×T | *** | |||||
hg19:Y:22747691-C-A hg38:Y:20585805-C-A | *** | ||||||
hg19:Y:7086898-C-A hg38:Y:7218857-C-A | *** | ||||||
hg38:Y:10969272-A-ACTGTG | *** | ||||||
hg38:Y:10969290-C-T | *** | ||||||
hg38:Y:10797954-C-A,T | *** | ||||||
hg38:Y:10663283-C-A | *** | ||||||
hg19:Y:28776904-C-A hg38:Y:26630757-C-A | *** | ||||||
hg38:Y:10987251-G-T | *** | ||||||
hg19:Y:21934980-ATT-A,AT hg38:Y:19773094-ATT-A,AT | 17×T | *** | |||||
hg19:Y:2859461-C-A hg38:Y:2991420-C-A | *** | ||||||
hg19:Y:2859732-C-A hg38:Y:2991691-C-A | *** | ||||||
hg19:Y:2861534-CAAA-C,CA hg38:Y:2993493-CAAA-C,CA | 25×A | *** | |||||
hg19:Y:3385385-C-A hg38:Y:3517344-C-A | *** | ||||||
hg19:Y:3852157-T-C hg38:Y:3984116-T-C | *** | ||||||
hg19:Y:4561396-C-A hg38:Y:4693355-C-A | *** | ||||||
hg19:Y:6807716-CTT-C,CTTT hg38:Y:6939675-CTT-C,CTTT | 14×T | *** | |||||
hg19:Y:6911641-T-G hg38:Y:7043600-T-G | *** | ||||||
hg19:Y:7217162-CT-C,CTT hg38:Y:7349121-CT-C,CTT | 14×T | *** | |||||
hg19:Y:7763987-C-A hg38:Y:7895946-C-A | *** | ||||||
hg19:Y:8029414-AT-A hg38:Y:8161373-AT-A | 9×T | *** | |||||
hg19:Y:8341874-CAA-C,CAAA hg38:Y:8473833-CAA-C,CAAA | 14×A | *** | |||||
hg19:Y:8655513-C-A hg38:Y:8787472-C-A | *** | ||||||
hg19:Y:9417139-C-A hg38:Y:9579530-C-A | *** | ||||||
hg19:Y:9421050-C-A hg38:Y:9583441-C-A | *** | ||||||
hg19:Y:9786522-T-C hg38:Y:9948913-T-C | *** | ||||||
hg19:Y:9865526-C-A hg38:Y:10027917-C-A | *** | ||||||
hg19:Y:9891600-C-A hg38:Y:10053991-C-A | *** | ||||||
hg19:Y:10023341-T-C hg38:Y:10185732-T-C | *** | ||||||
hg38:Y:10753834-C-A | *** | ||||||
hg38:Y:10849647-A-C,T | *** | ||||||
hg38:Y:10880300-T-A | *** | ||||||
hg38:Y:10898547-G-T | *** | ||||||
hg38:Y:10924344-TTCCATTCCACTCCACTCCACTCCAC-T | *** | ||||||
hg38:Y:10978906-T-C | *** | ||||||
hg38:Y:10987291-CTCT-C,CACA | *** | ||||||
hg19:Y:13642594-C-A hg38:Y:11486918-C-A | *** | ||||||
hg19:Y:14224479-T-C hg38:Y:12103773-T-C | *** | ||||||
hg19:Y:14318436-T-C hg38:Y:12197730-T-C | *** | ||||||
hg19:Y:14411269-C-A hg38:Y:12290566-C-A | *** | ||||||
hg19:Y:14416535-G-T hg38:Y:12295832-G-T | *** | ||||||
hg19:Y:14516707-C-A hg38:Y:12404908-C-A | *** | ||||||
hg19:Y:14543990-C-A hg38:Y:12432191-C-A | *** | ||||||
hg19:Y:14589795-C-A hg38:Y:12477995-C-A | *** | ||||||
hg19:Y:14689009-G-A hg38:Y:12577075-G-A | *** | ||||||
hg19:Y:14812069-GAA-G hg38:Y:12700140-GAA-G | 15×A | *** | |||||
hg19:Y:15220017-C-A hg38:Y:13108103-C-A | *** | ||||||
hg19:Y:15252197-T-C hg38:Y:13140283-T-C | *** | ||||||
hg19:Y:15326308-C-A hg38:Y:13214426-C-A | *** | ||||||
hg19:Y:15747575-C-A hg38:Y:13635695-C-A | *** | ||||||
hg19:Y:15780216-C-A hg38:Y:13668336-C-A | *** | ||||||
hg19:Y:16028711-A-G hg38:Y:13916831-A-G | *** | ||||||
hg19:Y:16527721-CT-C hg38:Y:14415841-CT-C | *** | ||||||
hg19:Y:16879393-C-A hg38:Y:14767513-C-A | *** | ||||||
hg19:Y:16981008-C-A hg38:Y:14869128-C-A | *** | ||||||
hg19:Y:17129922-C-A hg38:Y:15018042-C-A | Y71102 | *** | |||||
hg19:Y:17551919-C-A hg38:Y:15440039-C-A | *** | ||||||
hg19:Y:17678621-CTTTT-C,CTTT hg38:Y:15566741-CTTTT-C,CTTT | 26×T | *** | |||||
hg19:Y:17802652-C-A hg38:Y:15690772-C-A | *** | ||||||
hg19:Y:17928721-C-A hg38:Y:15816841-C-A | *** | ||||||
hg19:Y:18724948-C-A hg38:Y:16613068-C-A | *** | ||||||
hg19:Y:18738745-T-C hg38:Y:16626865-T-C | *** | ||||||
hg19:Y:19106908-C-A hg38:Y:16995028-C-A | *** | ||||||
hg19:Y:21149857-T-C hg38:Y:18987971-T-C | *** | ||||||
hg19:Y:21476592-C-A hg38:Y:19314706-C-A | *** | ||||||
hg19:Y:21648229-C-A hg38:Y:19486343-C-A | *** | ||||||
hg19:Y:21717838-C-T hg38:Y:19555952-C-T | *** | ||||||
hg19:Y:21773202-C-A hg38:Y:19611316-C-A | *** | ||||||
hg19:Y:22099881-A-G hg38:Y:19937995-A-G | *** | ||||||
hg19:Y:22487892-C-G hg38:Y:20326006-C-G | DYZ19 | *** | |||||
hg19:Y:22522326-C-A hg38:Y:20360440-C-A | *** | ||||||
hg19:Y:23052830-C-A hg38:Y:20890944-C-A | *** | ||||||
hg19:Y:23498080-ATTT-A,ATTTT hg38:Y:21336194-ATTT-A,ATTTT | 19×T | *** | |||||
hg19:Y:28588835-C-A hg38:Y:26442688-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 286386 | 9018330 | 7385298 | 7313723 |
Used in age calculations | 9018330 | 7385298 | 7313723 |
Counts of SNPs | 0 | 0 |
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