McNamara

BigY2: 424282
MDKA Birth: Ireland

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > ZZ10 > Z253 > Z2534 > BY25450 > FGC5618 > FGC5629 > L226 > FGC5660 > Z17669 > A10950 > DC29 > DC362 > DC31 > DC30 > DC189

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
424282
2911220-T-C 3043179-T-C DC779 YY+
14146533-T-C 12025827-T-C DC780 YY+
19343296-A-G 17231416-A-G DC781 YY+
22510863-G-T 20348977-G-T FT460755 DYZ19 +
22864065-G-GACAC 20702179-G-GACAC 12×AC*
22231280-C-T 20069394-C-T DYZ19 *
14658389-T-C 12546454-T-C PR1530 **
14937823-ATTTTC-A 12825888-ATTTTCTTTTCTTTTC-A 10×TTTTC**
7975832-G-A 8107791-G-A FT300297 **
14914808-G-A 12802875-G-A **
21633343-C-T 19471457-C-T **
22300707-A-G 20138821-A-G Z4981 DYZ19 **
22655873-C-A 20493987-C-A Y10120 Z9725 **
28797820-T-A 26651673-T-A **
8835228-CT-C 8967187-CT-C FGC23143 **
58981342-A-T 56835195-A-T **
58981347-A-G 56835200-A-G **
58981365-C-T 56835218-C-T **
22353453-G-C 20191567-G-C DYZ19 **
4840199-C-A 4972158-C-A **
16642176-C-A 14530296-C-A **
13487103-G-A 11331427-G-A **
11643699-G-A DYZ17 **
21564207-TA-T 19402321-TA-T 9×A**
9398062-C-A 9560453-C-A **
28791130-A-T 26644983-A-T **
11643714-G-A DYZ17 **
10971065-A-T **
10971067-A-C **
10895826-C-A **
22011789-C-A 19849903-C-A **
10893865-T-C **
17440385-C-A 15328505-C-A **
20028079-C-A 17916199-C-A P5_Prx **
10969914-C-A **
10827932-A-C **
8164942-T-G 8296901-T-G **
4472357-C-A 4604316-C-A **
5859037-C-A 5990996-C-A **
18981136-C-A 16869256-C-A **
23204441-C-A 21042555-C-A FT11103 **
21750907-G-T **
10982201-T-C **
10795146-G-T **
10792453-A-T **
21658601-G-A 19496715-G-A **
14823386-G-GTT 12711453-G-GTT 12×T**
11037935-G-C **
10951736-A-T **
13212567-C-A 11056891-C-A **
10791250-CTGCTG-C **
11018922-C-A **
11643703-G-T DYZ17 **
10827912-C-T **
10827914-C-G **
10827926-A-C **
10827930-C-A FT433007 **
10827945-A-T **
10827959-C-G **
10683252-C-T **
2810358-C-A 2942317-C-A **
13487614-C-A 11331938-C-A **
10971052-T-C **
10898314-A-T **
10803853-C-T **
7515265-CA-C 7647224-CA-C 9×A**
10992372-C-T **
7185602-C-A 7317561-C-A **
10995898-G-T **
10995901-C-T **
16929872-C-A 14817992-C-A **
10803836-G-C **
7519066-C-A 7651025-C-A **
11022774-C-A **
14352199-C-A 12231494-C-A **
11017333-C-CTGTGA **
11017340-G-A FT393794 **
11017351-T-TGTCAG **
11017359-A-C **
11017380-G-A **
18670215-C-A 16558335-C-A BY25577Y36874 **
11643676-A-C DYZ17 **
9772109-C-A 9934500-C-A **
13856314-A-G 11735608-A-G DYZ17 **
13856323-G-T 11735617-G-T DYZ17 **
23065168-T-C 20903282-T-C **
7237318-C-A 7369277-C-A **
28784458-G-T 26638311-G-T **
10792705-G-T FT431409 **
13487082-C-T 11331406-C-T **
9361102-G-T 9523493-G-T **
28537210-C-A 26391063-C-A **
5393334-G-A 5525293-G-A **
23045339-C-A 20883453-C-A **
15775353-C-A 13663473-C-A **
10953446-C-A **
15581086-C-A 13469206-C-A **
15215898-C-A 13103984-C-A **
2682717-A-T 2814676-A-T **
2682719-C-G 2814678-C-G **
2689383-T-G 2821342-T-G **
2695583-T-G 2827542-T-G **
2803857-C-A 2935816-C-A **
2855514-G-T 2987473-G-T **
2862869-C-A 2994828-C-A **
2865628-T-G 2997587-T-G **
2883010-G-T 3014969-G-T **
2906082-C-A 3038041-C-A **
3127354-G-T 3259313-G-T **
3275350-C-G 3407309-C-G **
3626331-C-A 3758290-C-A **
3660281-A-C 3792240-A-C **
3660426-G-T 3792385-G-T **
3696977-G-T 3828936-G-T **
3821179-C-G 3953138-C-G **
4049241-C-A 4181200-C-A **
4215488-G-T 4347447-G-T **
4270854-C-A 4402813-C-A **
4366649-C-A 4498608-C-A **
4389108-C-A 4521067-C-A **
4701111-CAGGGGGTG-C 4833070-CAGGGGGTG-C **
4781036-T-A 4912995-T-A **
4866383-C-A 4998342-C-A **
4929935-G-T 5061894-G-T **
5112655-T-A 5244614-T-A **
5367176-C-A 5499135-C-A FGC39482 **
5457069-C-A 5589028-C-A **
6031338-C-A 6163297-C-A **
6149759-C-A 6281718-C-A IR3_Dst **
6191338-G-T 6323297-G-T IR3_Dst **
6298494-C-CAA 6430453-C-CAA IR3_Dst **
6298512-A-C 6430471-A-C IR3_Dst **
6328306-C-A 6460265-C-A IR3_Dst **
6427059-A-C 6559018-A-C **
6648024-C-A 6779983-C-A **
6714273-G-T 6846232-G-T **
6800488-C-A 6932447-C-A **
6800512-T-A 6932471-T-A **
6831209-A-C 6963168-A-C **
6981048-C-A 7113007-C-A **
6983022-C-A 7114981-C-A FT407397 **
7045720-C-A 7177679-C-A **
7048429-G-T 7180388-G-T **
7091402-C-A 7223361-C-A **
7097351-CA-C 7229310-CA-C **
7111132-C-A 7243091-C-A **
7111471-C-A 7243430-C-A **
7112371-A-T 7244330-A-T **
7126577-C-G 7258536-C-G **
7134826-T-A 7266785-T-A **
7185663-C-A 7317622-C-A **
7188453-C-A 7320412-C-A **
7196219-T-TG 7328178-T-TG **
7213424-T-A 7345383-T-A **
7233082-G-T 7365041-G-T **
7234972-C-A 7366931-C-A **
7252341-C-A 7384300-C-A **
7264916-A-C 7396875-A-C **
7371762-C-A 7503721-C-A **
7411498-C-A 7543457-C-A **
7474444-G-A 7606403-G-A IR1_L **
7536505-C-A 7668464-C-A **
7541116-T-A 7673075-T-A **
7649287-C-A 7781246-C-A FT351167 **
7662565-A-T 7794524-A-T **
7854554-AAATATTAAATTATTTT-A 7986513-AAATATTAAATTATTTT-A **
7894936-G-T 8026895-G-T **
7940479-G-A 8072438-G-A **
7947129-G-A 8079088-G-A **
7969589-T-C 8101548-T-C **
7994350-C-A 8126309-C-A **
8052784-T-A 8184743-T-A **
8164932-A-T 8296891-A-T **
8164935-A-G 8296894-A-G **
8164944-C-A 8296903-C-A **
8164947-G-A 8296906-G-A **
8166636-C-A 8298595-C-A **
8167915-C-A 8299874-C-A **
8214298-G-A 8346257-G-A **
8386110-C-A 8518069-C-A **
8398833-TC-T 8530792-TC-T **
8658978-C-A 8790937-C-A **
8689762-C-A 8821721-C-A **
8710189-A-C 8842148-A-C **
8720671-C-A 8852630-C-A **
9120557-G-T **
9038213-A-C 9200604-A-C **
9038219-G-C 9200610-G-C **
9040245-G-T 9202636-G-T **
9048137-G-T 9210528-G-T **
9055525-C-A 9217916-C-A **
9077118-G-T 9239509-G-T **
9591795-G-C 9754186-G-C IR3_Prx **
9669951-T-G 9832342-T-G IR3_Prx **
9735491-A-C 9897882-A-C IR3_Prx **
9826281-A-G 9988672-A-G **
9891664-C-A 10054055-C-A **
9940518-C-A 10102909-C-A **
9952180-C-A 10114571-C-A **
9966168-C-A 10128559-C-A **
9971676-C-A 10134067-C-A **
9979590-C-A 10141981-C-A **
9989942-C-T 10152333-C-T **
10033125-C-A 10195516-C-A **
10661142-C-A **
10673583-A-G **
10678576-TCCAATC-T **
10678586-TCCAC-T **
10678618-C-T **
10678638-C-CAGACT **
10687257-G-A **
10688856-C-A **
10693813-C-A **
10769431-ATTCCT-A **
10776249-C-A **
10781313-C-G **
10791224-T-A **
10791227-A-G **
10791262-A-G **
10791280-C-T **
10792444-T-G **
10792499-C-G **
10792510-C-A **
10792704-A-T **
10803801-A-AATTCCATTTG **
10803818-C-G **
10803827-A-G **
10803840-C-A **
10803858-T-A **
10805249-G-T **
10810864-A-T **
10812541-C-A **
10814505-T-A **
10819883-T-A **
10826784-C-A **
10830143-C-A **
10878588-C-G **
10893797-C-G **
10893798-A-C **
10893818-ATTCT-A **
10893851-C-A **
10893862-A-G **
10893868-C-T **
10911581-C-T **
10914779-C-A **
10965081-C-G **
10965397-T-G **
10967438-C-A Z2624 **
10970890-G-T **
10971057-C-T **
10971060-C-A **
10971069-T-A **
10971896-CT-C **
10971926-C-T **
10973065-T-A **
10973158-A-T **
10975256-G-A **
10978966-T-G **
10982610-T-A **
10993978-C-A **
11015177-T-G **
11017594-C-A **
11022085-C-CCATTACTCT **
13224147-C-A 11068471-C-A **
13224491-T-G 11068815-T-G **
13227483-C-A 11071807-C-A **
13273284-A-G 11117608-A-G **
13273373-T-A 11117697-T-A **
13294182-C-A 11138506-C-A **
13294242-A-C 11138566-A-C **
13307128-C-A 11151452-C-A **
13307669-C-A 11151993-C-A **
13319247-C-A 11163571-C-A **
13324701-C-A 11169025-C-A FT462804 **
13347806-G-A 11192130-G-A **
13347831-G-A 11192155-G-A **
13361237-C-A 11205561-C-A **
13429758-T-A 11274082-T-A **
13446542-T-A 11290866-T-A **
13460972-G-A 11305296-G-A **
13460980-T-G 11305304-T-G **
13461021-C-G 11305345-C-G **
13487094-A-G 11331418-A-G **
13487096-T-G 11331420-T-G **
13487097-G-C 11331421-G-C **
13487106-A-C 11331430-A-C **
13621243-C-A 11465567-C-A **
13709281-GACCCT-G 11553605-GACCCT-G DYZ17 **
13709289-T-A 11553613-T-A DYZ17 **
11643679-G-T DYZ17 **
11643704-G-C DYZ17 **
11643709-G-T DYZ17 **
11643736-A-ATAAACCCGAT DYZ17 **
11643742-T-G DYZ17 **
11658173-GA-G DYZ17 **
11677582-C-A DYZ17 **
13838350-TGGAATGGACTG-T 11717644-TGGAATGGACTG-T DYZ17 **
13869189-G-T 11748483-G-T DYZ17 **
14007263-G-A 11886557-G-A **
14007301-C-A 11886595-C-A **
14025463-A-T 11904757-A-T **
14033818-A-C 11913112-A-C **
14064360-GAA-G 11943654-GAA-G **
14089838-T-C 11969132-T-C **
14107760-C-A 11987054-C-A **
14222674-G-A 12101968-G-A **
14245014-C-A 12124308-C-A **
14270599-C-A 12149893-C-A **
14294387-A-G 12173681-A-G **
14339961-C-A 12219256-C-A **
14409111-A-C 12288408-A-C **
14415543-C-A 12294840-C-A **
14448890-C-A 12328163-C-A **
14463699-C-A 12342972-C-A **
14593593-C-A 12481793-C-A **
14658381-C-T 12546446-C-T **
14658382-A-G 12546447-A-G **
14701020-T-. 12589086-C-T CTS3175 **
14703379-T-A 12591445-T-A **
14723922-T-G 12611990-T-G **
14731448-C-A 12619516-C-A **
14743952-A-T 12632021-A-T **
14748119-C-A 12636188-C-A **
14753908-C-T 12641977-C-T FT30365 **
14756580-C-A 12644649-C-A **
14765221-C-A 12653290-C-A **
14771226-C-T 12659295-C-T FTA28027 **
14810887-G-T 12698958-G-T **
14816182-T-A 12704253-T-A **
14844417-C-A 12732483-C-A **
14888273-C-A 12776339-C-A **
14912083-G-T 12800150-G-T **
14913012-C-A 12801079-C-A **
14914794-C-G 12802861-C-G **
14914802-C-G 12802869-C-G **
14914806-C-T 12802873-C-T FTB10776 **
14914813-T-C 12802880-T-C **
14916747-C-A 12804814-C-A **
14984188-C-A 12872256-C-A **
14992956-T-A 12881041-T-A **
15059683-A-T 12947775-A-T **
15059694-T-A 12947786-T-A **
15109646-C-G 12997733-C-G **
15109881-G-T 12997968-G-T **
15111399-C-A 12999486-C-A **
15115110-T-C 13003197-T-C **
15115179-C-A 13003266-C-A **
15136928-T-A 13025015-T-A **
15218844-G-T 13106930-G-T **
15218902-A-C 13106988-A-C **
15236614-C-A 13124700-C-A **
15252890-A-C 13140976-A-C **
15252926-C-CAA 13141012-C-CAA 8×A**
15285985-C-A 13174084-C-A **
15286043-C-A 13174142-C-A **
15379388-C-G 13267508-C-G **
15393090-A-C 13281210-A-C **
15393109-A-C 13281229-A-C **
15397128-G-T 13285248-G-T FGC47973 **
15422097-CCAA-C 13310217-CCAA-C **
15434012-C-A 13322132-C-A **
15493226-A-C 13381346-A-C **
15507781-CTG-C 13395901-CTG-C **
15681964-T-G 13570084-T-G **
15682297-GA-G 13570417-GA-G **
15739967-C-A 13628087-C-A **
15743265-C-A 13631385-C-A **
15746473-C-A 13634593-C-A **
15793351-C-A 13681471-C-A **
15815214-G-T 13703334-G-T **
15842396-T-A 13730516-T-A **
15852600-A-T 13740720-A-T **
15862439-C-A 13750559-C-A **
15882058-G-C 13770178-G-C **
15904066-C-A 13792186-C-A **
15944055-T-A 13832175-T-A **
15997349-G-C 13885469-G-C **
15998785-C-A 13886905-C-A **
15998799-C-A 13886919-C-A **
16053391-C-A 13941511-C-A **
16071770-C-A 13959890-C-A **
16079644-T-G 13967764-T-G **
16102017-G-GT 13990137-G-GT P8_Prx **
16162080-G-T 14050200-G-T P8_Dst **
16178634-C-A 14066754-C-A **
16294859-C-A 14182979-C-A **
16309563-C-A 14197683-C-A **
16312001-C-A 14200121-C-A **
16406939-C-A 14295059-C-A **
16429595-G-C 14317715-G-C **
16451804-A-C 14339924-A-C **
16497953-C-A 14386073-C-A **
16554666-C-G 14442786-C-G **
16605616-C-A 14493736-C-A **
16717435-C-A 14605555-C-A **
16739495-C-A 14627615-C-A **
16826464-C-A 14714584-C-A **
16962915-C-A 14851035-C-A **
16988747-A-T 14876867-A-T **
16988770-T-A 14876890-T-A **
16989336-C-A 14877456-C-A **
17046639-C-A 14934759-C-A FGC33696 **
17115283-C-A 15003403-C-A **
17146502-G-A 15034622-G-A **
17147938-C-A 15036058-C-A **
17158519-T-C 15046639-T-C **
17158522-G-T 15046642-G-T **
17158525-G-A 15046645-G-A FT357741 **
17158529-T-G 15046649-T-G **
17169772-T-G 15057892-T-G **
17224330-C-A 15112450-C-A **
17233789-T-G 15121909-T-G **
17309949-C-A 15198069-C-A **
17400334-C-A 15288454-C-A **
17424394-C-A 15312514-C-A **
17434075-G-A 15322195-G-A **
17434114-G-C 15322234-G-C **
17480243-C-A 15368363-C-A **
17648386-C-A 15536506-C-A **
17672187-C-A 15560307-C-A **
17707162-T-C 15595282-T-C **
17741944-T-C 15630064-T-C **
17763155-T-A 15651275-T-A **
17831245-C-A 15719365-C-A **
17844281-C-A 15732401-C-A **
17882922-C-A 15771042-C-A FTA6077 **
17920835-G-A 15808955-G-A MF1880 **
17928556-C-A 15816676-C-A **
18019855-G-A 15907975-G-A **
18019940-G-A 15908060-G-A **
18036141-C-A 15924261-C-A **
18036439-C-A 15924559-C-A **
18150536-C-A 16038656-C-A **
18165888-A-C 16054008-A-C **
18165949-A-C 16054069-A-C **
18165954-C-G 16054074-C-G **
18166238-C-A 16054358-C-A **
18184982-G-T 16073102-G-T **
18219208-C-A 16107328-C-A FT139800 **
18246465-A-G 16134585-A-G **
18288740-T-G 16176860-T-G P6_Prx **
18397439-C-A 16285559-C-A P6_Gap **
18570227-C-A 16458347-C-A F22673 **
18607114-G-C 16495234-G-C **
18631964-T-C 16520084-T-C **
18631966-C-A 16520086-C-A **
18703721-C-A 16591841-C-A **
18709695-C-T 16597815-C-T S2555Y10716 FGC29563 **
18719068-C-A 16607188-C-A **
18785310-C-A 16673430-C-A **
18804050-C-A 16692170-C-A **
18816988-C-A 16705108-C-A **
18822020-T-G 16710140-T-G **
18832810-T-G 16720930-T-G **
18847565-T-A 16735685-T-A **
18853938-C-G 16742058-C-G **
18894959-C-A 16783079-C-A **
18921191-G-A 16809311-G-A **
18937638-C-A 16825758-C-A **
18959010-A-T 16847130-A-T **
18973254-C-A 16861374-C-A **
19041100-A-T 16929220-A-T **
19041131-C-A 16929251-C-A **
19043873-T-A 16931993-T-A **
19043921-A-G 16932041-A-G **
19187680-T-A 17075800-T-A **
19299679-C-A 17187799-C-A **
19322179-C-A 17210299-C-A **
19377627-G-C 17265747-G-C **
19377649-T-G 17265769-T-G **
19382873-C-A 17270993-C-A **
19402624-C-A 17290744-C-A **
19429621-C-A 17317741-C-A **
19463492-C-A 17351612-C-A **
19537061-A-G 17425181-A-G **
19564202-C-A 17452322-C-A **
19567823-GAGC-G 17455943-GAGC-G P5_Prx **
19732397-C-A 17620517-C-A P5_Prx **
20052714-G-C 17940834-G-C P5_Prx **
20352384-G-T 18190498-G-T P5_Dst **
20379993-G-T 18218107-G-T P5_Dst **
20612634-G-T 18450748-G-T P4_Prx **
20712378-T-G 18550492-T-G P4_Prx **
20815553-C-A 18653667-C-A P4_Gap **
21006514-ACAC-A 18844628-ACAC-A P4_Dst **
21091049-A-G 18929163-A-G **
21149504-C-A 18987618-C-A **
21172614-A-C 19010728-A-C **
21194443-C-A 19032557-C-A **
21212375-C-A 19050489-C-A **
21240688-G-T 19078802-G-T **
21252027-C-A 19090141-C-A **
21260263-G-T 19098377-G-T **
21308738-C-A 19146852-C-A **
21355344-C-G 19193458-C-G **
21464233-A-AAAGT 19302347-A-AAAGT **
21468988-C-A 19307102-C-A **
21469003-AT-A 19307117-AT-A **
21544938-G-T 19383052-G-T **
21545217-C-A 19383331-C-A **
21554999-C-G 19393113-C-G **
21650610-C-T 19488724-C-T **
21748430-C-A 19586544-C-A **
21771686-T-A 19609800-T-A **
21818838-A-T 19656952-A-T **
21824969-C-A 19663083-C-A **
21839949-T-A 19678063-T-A **
22023863-T-A 19861977-T-A **
22055270-A-T 19893384-A-T **
22104665-A-C 19942779-A-C **
22146258-C-A 19984372-C-A **
22166781-T-G 20004895-T-G **
22213882-T-A 20051996-T-A **
22258355-C-A 20096469-C-A DYZ19 **
22316250-A-T 20154364-A-T DYZ19 **
22429129-T-A 20267243-T-A DYZ19 **
22436829-T-C 20274943-T-C DYZ19 **
22446093-G-A 20284207-G-A DYZ19 **
22522465-C-A 20360579-C-A **
22522749-C-A 20360863-C-A **
22576634-C-A 20414748-C-A **
22605165-C-A 20443279-C-A **
22678286-A-AT 20516400-A-AT **
22749421-G-A 20587535-G-A ZS11536 **
22749429-C-T 20587543-C-T **
22832564-C-A 20670678-C-A **
22832593-C-A 20670707-C-A **
22866098-A-C 20704212-A-C **
22875490-C-A 20713604-C-A **
22881221-C-G 20719335-C-G **
22979275-A-T 20817389-A-T **
22988663-T-A 20826777-T-A **
22988670-G-C 20826784-G-C **
22991704-T-G 20829818-T-G **
23074132-T-A 20912246-T-A **
23119998-C-A 20958112-C-A **
23250232-C-A 21088346-C-A **
23252744-C-A 21090858-C-A **
23299859-C-T 21137973-C-T **
23449268-C-A 21287382-C-A **
23471402-C-A 21309516-C-A **
23528505-C-A 21366619-C-A **
23529555-A-C 21367669-A-C **
23597637-T-A 21435751-T-A **
23651131-G-T 21489245-G-T **
23779610-G-T 21617724-G-T **
23808232-T-G 21646346-T-G **
23819207-C-A 21657321-C-A **
23840130-C-A 21678244-C-A **
24220979-G-T 22074832-G-T P3_b1 **
24354003-C-A 22207856-C-A P3_t1 **
24373025-C-A 22226878-C-A **
24421754-A-C 22275607-A-C **
24475144-G-T 22328997-G-T **
24491656-C-A 22345509-C-A **
24874451-A-G 22728304-A-G g1 **
24875661-C-A 22729514-C-A g1 **
26095352-T-C 23949205-T-C P1_Y1 **
26201714-C-G 24055567-C-G P1_Y1 **
26415676-CAAAAAAAA-C 24269529-CAAAAAAAA-C P1_Y1 20×A**
27714846-G-T 25568699-G-T P1_Y2 **
27791952-T-C 25645805-T-C P1_Y2 **
27829172-C-A 25683025-C-A P1_Y2 **
27919843-A-C 25773696-A-C P1_Y2 **
28535692-C-A 26389545-C-A **
28622891-C-A 26476744-C-A **
28664925-TACAC-T 26518778-TACAC-T 12×AC**
28711975-C-A 26565828-C-A **
28772923-C-A 26626776-C-A **
28801628-A-T 26655481-A-T **
56826642-G-A **
56859016-G-C **
13467840-C-T 11312164-C-T ***
14827211-T-TA 12715278-T-TA 10×A***
14868989-GGT-G 12757059-GGT-G ***
15618831-C-A 13506951-C-A ***
15964912-G-GT 13853032-G-GT 9×T***
16912727-C-A 14800847-C-A ***
19199359-G-A 17087479-G-A ***
17447346-C-CT 15335466-C-CT 8×T***
14880544-AT-A 12768614-AT-A 10×T***
7142640-C-A 7274599-C-A ***
7947843-T-A 8079802-T-A BY176511 ***
7947844-A-G 8079803-A-G BY176512 ***
13487135-G-A 11331459-G-A A16108 ***
24520707-G-GA 22374560-G-GA 10×A***
17004767-C-A 14892887-C-A ***
11014438-A-G ***
21572228-GA-G,GAA 19410342-GA-G,GAA 14×A***
22647516-C-A 20485630-C-A ***
21925462-CA-C 19763576-CA-C 9×A***
22591713-C-A 20429827-C-A ***
17029465-GAA-G,GA 14917585-GAA-G,GA 15×A***
8846843-C-A 8978802-C-A ***
21905283-CA-C,CAA 19743397-CA-C,CAA 16×A***
2688345-C-A 2820304-C-A ***
2724580-A-AT 2856539-A-AT 9×T***
2782392-C-A 2914351-C-A ***
2821332-C-A 2953291-C-A ***
2868844-C-A 3000803-C-A ***
2912975-C-A 3044934-C-A ***
3821450-C-A 3953409-C-A ***
4272226-C-A 4404185-C-A ***
4567444-G-A 4699403-G-A ***
4567479-C-A 4699438-C-A ***
5191056-C-A 5323015-C-A ***
6426320-C-A 6558279-C-A ***
6674465-A-ATT 6806424-A-ATT 16×T***
6741259-C-A 6873218-C-A ***
6741825-G-C 6873784-G-C ***
6799454-C-A 6931413-C-A ***
6849316-A-T 6981275-A-T ***
6997004-TAA-T 7128963-TAA-T 12×A***
7134851-T-C 7266810-T-C ***
7237506-C-A 7369465-C-A ***
7538813-C-A 7670772-C-A ***
7647319-C-A 7779278-C-A ***
7647729-G-T 7779688-G-T ***
7825211-C-A 7957170-C-A ***
7868225-C-CA 8000184-C-CA 9×A***
7921928-C-A 8053887-C-A ***
7947826-T-A 8079785-T-A ***
7947848-C-A 8079807-C-A BY176513 ***
7973930-C-A 8105889-C-A ***
8266861-T-C 8398820-T-C ***
8387998-C-A 8519957-C-A ***
8426560-C-A 8558519-C-A ***
8470549-CAAAAA-C 8602508-CAAAAA-C 22×A***
8676853-C-A 8808812-C-A Y87699 ***
8681403-C-A 8813362-C-A ***
8992768-G-T 9155159-G-T ***
9418853-C-A 9581244-C-A ***
9453582-C-A 9615973-C-A ***
9471398-C-A 9633789-C-A ***
9475913-T-C 9638304-T-C ***
9727046-G-T 9889437-G-T IR3_Prx ***
9737391-T-A 9899782-T-A IR3_Prx ***
9815889-C-A 9978280-C-A ***
10026415-C-A 10188806-C-A ***
10746932-C-A ***
10914709-T-C ***
10914719-A-C,G ***
10914728-A-C,T ***
11003723-C-A ***
13219032-C-A 11063356-C-A ***
13257708-C-A 11102032-C-A ***
13472278-C-A 11316602-C-A ***
13483876-C-A 11328200-C-A ***
13487138-C-T 11331462-C-T ***
13817922-C-A 11697216-C-A DYZ17 ***
13883958-C-A 11763252-C-A ***
14030965-T-C 11910259-T-C ***
14180896-C-A 12060190-C-A ***
14485030-G-T 12364299-G-T ***
14629826-T-C 12517895-T-C ***
14777586-C-A 12665655-C-A ***
14807708-C-A 12695779-C-A ***
14888753-C-A 12776819-C-A ***
14888799-GTGTGAAGTTGA-G 12776865-GTGTGAAGTTGA-G ***
14928661-G-C 12816726-G-C ***
14965672-C-A 12853747-C-A ***
15057144-C-A 12945236-C-A ***
15178082-C-A 13066168-C-A ***
15182329-C-A 13070415-C-A ***
15199469-C-A 13087555-C-A ***
15277204-G-T 13165293-G-T ***
15289559-C-A 13177658-C-A ***
15303616-C-A 13191715-C-A ***
15360673-C-A 13248793-C-A ***
15372696-A-G 13260816-A-G ***
15456735-C-A 13344855-C-A ***
15479175-C-A 13367295-C-A ***
15480194-G-A 13368314-G-A ***
15480204-G-GC 13368324-G-GC ***
15512621-C-A 13400741-C-A ***
15564013-C-A 13452133-C-A ***
15576119-C-A 13464239-C-A ***
15588805-C-A 13476925-C-A ***
15604882-C-A 13493002-C-A ***
15681840-C-A 13569960-C-A ***
15815200-A-G 13703320-A-G BY104298 ***
15845963-C-A 13734083-C-A ***
15869060-TTTTTTA-T 13757180-TTTTTTA-T ***
15901182-C-A 13789302-C-A ***
15911984-C-A 13800104-C-A ***
16058314-C-A 13946434-C-A ***
16063334-AT-A 13951454-AT-A 8×T***
16078797-C-A 13966917-C-A FT212747 ***
16297570-C-A 14185690-C-A ***
16528883-C-A 14417003-C-A ***
16599723-C-A 14487843-C-A ***
16888783-C-A 14776903-C-A ***
16918927-C-A 14807047-C-A ***
16922409-TA-T,TAA 14810529-TA-T,TAA 12×A***
16988034-AAAAAAAATAGAAAAAAAAAAG-A 14876154-AAAAAAAATAGAAAAAAAAAAG-A ***
17022956-C-A 14911076-C-A ***
17077195-C-T 14965315-C-T ***
17110449-C-A 14998569-C-A ***
17112830-C-A 15000950-C-A ***
17141614-C-A 15029734-C-A ***
17348297-CA-C,CAA 15236417-CA-C,CAA 17×A***
17673038-C-A 15561158-C-A ***
17693525-C-A 15581645-C-A Y72168 ***
17711768-TCTTTTTTTTTTTC-T 15599888-TCTTTTTTTTTTTC-T ***
18395387-C-G 16283507-C-G P6_Gap ***
18395404-A-C 16283524-A-C P6_Gap ***
18603500-C-A 16491620-C-A ***
18695803-C-A 16583923-C-A ***
18725155-C-A 16613275-C-A ***
18754673-T-C 16642793-T-C ***
18775749-T-C 16663869-T-C ***
18904475-C-A 16792595-C-A ***
18910725-C-A 16798845-C-A ***
18919584-C-A 16807704-C-A ***
18929197-C-A 16817317-C-A ***
18942583-C-A 16830703-C-A ***
18986293-C-A 16874413-C-A ***
19240232-A-G 17128352-A-G ***
19269218-C-A 17157338-C-A ***
19333229-AT-A,ATT 17221349-AT-A,ATT 21×T***
19373640-C-A 17261760-C-A ***
19449009-CT-C,CTT 17337129-CT-C,CTT 13×T***
19528904-C-A 17417024-C-A ***
20063941-TAA-T,TA 17952061-TAA-T,TA P5_Gap 18×A***
20548387-G-T 18386501-G-T P5_Dst ***
20554554-G-T 18392668-G-T P5_Dst ***
20817405-C-A 18655519-C-A P4_Gap ***
21070546-C-A 18908660-C-A ***
21189714-T-A,C 19027828-T-A,C ***
21398896-C-A 19237010-C-A ***
21428368-C-A 19266482-C-A ***
21471502-C-A 19309616-C-A ***
21504461-C-A 19342575-C-A ***
21557203-TATACTGCTGGTG-T 19395317-TATACTGCTGGTG-T ***
21846080-C-A 19684194-C-A ***
22108904-T-C 19947018-T-C ***
22137831-C-A 19975945-C-A ***
22514844-T-TA 20352958-T-TA 8×A***
22519572-C-A 20357686-C-A ***
22578101-C-A 20416215-C-A ***
22614428-G-A 20452542-G-A ***
22650418-C-A 20488532-C-A ***
22727416-C-A 20565530-C-A ***
22734798-C-A 20572912-C-A ***
22744273-C-T 20582387-C-T ***
22867373-C-A 20705487-C-A ***
22870711-TCA-T 20708825-TCA-T ***
22978846-C-A 20816960-C-A ***
23034514-T-A 20872628-T-A ***
23040157-TA-T,TAAA 20878271-TA-T,TAAA 17×A***
23052826-C-A 20890940-C-A ***
23322007-C-A 21160121-C-A ***
23380102-C-A 21218216-C-A ***
23481218-C-A 21319332-C-A ***
23515162-A-ATT 21353276-A-ATT 14×T***
23532212-T-C 21370326-T-C ***
23639941-C-A 21478055-C-A ***
23769659-C-A 21607773-C-A ***
23776952-C-A 21615066-C-A ***
23792504-C-A 21630618-C-A ***
23803592-C-A 21641706-C-A ***
23827530-T-TA 21665644-T-TA 9×A***
23828897-T-C 21667011-T-C ***
24469420-C-A 22323273-C-A ***
24483636-G-A 22337489-G-A ***
24494722-C-A 22348575-C-A ***
24523626-G-T 22377479-G-T ***
27263174-G-T 25117027-G-T P1_g3 ***
28170053-G-A 26023906-G-A P1_b4 ***
28478685-C-A 26332538-C-A ***
28547656-C-A 26401509-C-A ***
28784441-G-A 26638294-G-A ***
28784443-G-GTGTAT 26638296-G-GTGTAT ***
56832030-T-G ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.