Kirk
BigY2: 651283MDKA Birth: United States > Virginia
Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 651283 |
---|---|---|---|---|---|---|---|---|
22224483-C-A | 20062597-C-A | DYZ19 | A* | |||||
19454644-C-T | 17342764-C-T | BY129219 | Y | Y | + | |||
23471038-CAAAAA-C | 21309152-CAAAAA-C | 19×A | ** | |||||
5785587-C-A | 5917546-C-A | Y888 | ** | |||||
7237230-C-T | 7369189-C-T | ** | ||||||
9962804-T-A | 10125195-T-A | ** | ||||||
15468570-C-A | 13356690-C-A | Z31763 | ** | |||||
19460675-G-A | 17348795-G-A | Y3692 | Y4138 FGC21570 | ** | ||||
59027655-G-T | 56881508-G-T | ** | ||||||
28784635-G-A | 26638488-G-A | ** | ||||||
20213174-TCTTCTC-T | 18051288-TCTTCTC-T | P5_Dst | 6×CTTCTC | ** | ||||
14025759-G-T | 11905053-G-T | FGC13453 | ** | |||||
18923983-GAA-G | 16812103-GAA-G | 22×A | ** | |||||
22902108-CAAA-C | 20740222-CAAA-C | 17×A | ** | |||||
9997849-A-C | 10160240-A-C | ** | ||||||
28784629-G-T | 26638482-G-T | ** | ||||||
11030227-C-A | ** | |||||||
11030245-T-A | ** | |||||||
11030257-G-C | ** | |||||||
10899082-CTCCAT-C | ** | |||||||
10973255-C-A | ** | |||||||
13489007-A-T | 11333331-A-T | ** | ||||||
8172520-TAA-T | 8304479-TAA-T | 9×A | ** | |||||
10787350-A-C | ** | |||||||
10973898-C-T | ** | |||||||
10929777-C-A | ** | |||||||
10929799-T-G | ** | |||||||
10929803-A-C | ** | |||||||
10929811-G-C | ** | |||||||
10929818-G-T | ** | |||||||
10929887-G-A | ** | |||||||
10929890-C-G | ** | |||||||
10929891-C-T | ** | |||||||
11026087-C-CTTCTG | ** | |||||||
11658898-C-A | DYZ17 | ** | ||||||
21584110-G-T | 19422224-G-T | ** | ||||||
22287088-C-T | 20125202-C-T | DYZ19 | ** | |||||
10678274-T-C | ** | |||||||
10678281-T-G | ** | |||||||
10678282-G-C | ** | |||||||
10988665-C-T | ** | |||||||
10980792-T-G | ** | |||||||
26421473-G-T | 24275326-G-T | P1_Y1 | ** | |||||
10994664-C-CA | ** | |||||||
10994668-CCACTCA-C | ** | |||||||
10994690-A-G | ** | |||||||
17675541-GAAAA-G | 15563661-GAAAA-G | 20×A | ** | |||||
10925012-C-CTACCTCATTT | ** | |||||||
10925023-C-T | ** | |||||||
10925035-T-C | ** | |||||||
17093861-C-A | 14981981-C-A | ** | ||||||
10789541-T-C | ** | |||||||
10899037-T-C | ** | |||||||
15593255-C-A | 13481375-C-A | ** | ||||||
16581801-C-A | 14469921-C-A | ** | ||||||
17217398-C-A | 15105518-C-A | ** | ||||||
10925490-A-T | ** | |||||||
10925461-T-A | ** | |||||||
15128205-T-G | 13016292-T-G | ** | ||||||
9942900-A-C | 10105291-A-C | ** | ||||||
10954326-C-A | ** | |||||||
14339857-C-A | 12219152-C-A | ** | ||||||
13468553-T-C | 11312877-T-C | ** | ||||||
19732413-C-G | 17620533-C-G | P5_Prx | ** | |||||
11028189-C-A | ** | |||||||
10692275-A-C | ** | |||||||
14371290-C-A | 12250586-C-A | ** | ||||||
8351804-C-A | 8483763-C-A | ** | ||||||
20776395-G-T | 18614509-G-T | P4_Prx | ** | |||||
10787327-C-T | ** | |||||||
18695976-C-A | 16584096-C-A | FTB37635 | ** | |||||
3345746-C-A | 3477705-C-A | FT123123 | ** | |||||
22540484-C-A | 20378598-C-A | ** | ||||||
19831753-A-AG | 17719873-A-AG | P5_Prx | ** | |||||
21306618-G-AT | 19144732-G-AT | ** | ||||||
11016347-C-G | ** | |||||||
10837015-A-C | ** | |||||||
19052443-G-T | 16940563-G-T | ** | ||||||
7655210-T-TA | 7787169-T-TA | 8×A | ** | |||||
15171503-C-A | 13059589-C-A | ** | ||||||
10896100-C-T | ** | |||||||
22353453-G-T | 20191567-G-T | DYZ19 | ** | |||||
10746855-C-T | ** | |||||||
10746880-T-TACAAA | ** | |||||||
21202432-C-A | 19040546-C-A | ** | ||||||
17318151-C-A | 15206271-C-A | ** | ||||||
20579234-C-A | 18417348-C-A | P5_Dst | ** | |||||
22614267-C-A | 20452381-C-A | ** | ||||||
17385642-C-A | 15273762-C-A | ** | ||||||
10787299-T-C | ** | |||||||
7093191-A-G | 7225150-A-G | ** | ||||||
10744219-A-ATCCAC | ** | |||||||
19399750-T-G | 17287870-T-G | ** | ||||||
7437535-C-A | 7569494-C-A | ** | ||||||
23176939-C-A | 21015053-C-A | ** | ||||||
14528353-C-A | 12416554-C-A | ** | ||||||
10779246-C-A | ** | |||||||
7206853-CT-C | 7338812-CT-C | 8×T | ** | |||||
10789536-T-C | ** | |||||||
10868985-T-C | ** | |||||||
18965956-C-A | 16854076-C-A | ** | ||||||
9865206-C-A | 10027597-C-A | ** | ||||||
14582402-C-A | 12470602-C-A | ** | ||||||
19394059-CTTTT-C | 17282179-CTTTT-C | 37×T | ** | |||||
17588599-C-A | 15476719-C-A | ** | ||||||
21388667-C-CTT | 19226781-C-CTT | 14×T | ** | |||||
17153515-C-A | 15041635-C-A | ** | ||||||
11028159-C-T | ** | |||||||
14160251-G-T | 12039545-G-T | ** | ||||||
15509225-C-A | 13397345-C-A | ** | ||||||
2652086-C-A | 2784045-C-A | ** | ||||||
2701763-C-A | 2833722-C-A | ** | ||||||
2708447-A-C | 2840406-A-C | ** | ||||||
2708455-A-T | 2840414-A-T | ** | ||||||
2758292-A-T | 2890251-A-T | ** | ||||||
2758296-A-T | 2890255-A-T | ** | ||||||
2758300-A-T | 2890259-A-T | ** | ||||||
2759607-T-A | 2891566-T-A | ** | ||||||
2771248-G-T | 2903207-G-T | ** | ||||||
2773865-A-C | 2905824-A-C | ** | ||||||
2817777-G-T | 2949736-G-T | ** | ||||||
2845862-A-C | 2977821-A-C | ** | ||||||
2855624-T-G | 2987583-T-G | ** | ||||||
2892546-T-A | 3024505-T-A | ** | ||||||
2901756-T-A | 3033715-T-A | ** | ||||||
2980823-T-A | 3112782-T-A | ** | ||||||
3012594-T-A | 3144553-T-A | ** | ||||||
3166713-A-G | 3298672-A-G | ** | ||||||
3251748-C-A | 3383707-C-A | ** | ||||||
3254310-G-T | 3386269-G-T | ** | ||||||
3347481-C-A | 3479440-C-A | ** | ||||||
3371953-C-A | 3503912-C-A | ** | ||||||
3418073-G-T | 3550032-G-T | ** | ||||||
3419982-GT-G | 3551941-GT-G | 12×T | ** | |||||
3583783-C-A | 3715742-C-A | ** | ||||||
3759272-C-A | 3891231-C-A | ** | ||||||
3865960-G-C | 3997919-G-C | ** | ||||||
4204982-G-T | 4336941-G-T | ** | ||||||
4274985-G-A | 4406944-G-A | ** | ||||||
4315805-C-A | 4447764-C-A | ** | ||||||
4326404-C-A | 4458363-C-A | ** | ||||||
4470066-C-A | 4602025-C-A | ** | ||||||
4532406-G-T | 4664365-G-T | ** | ||||||
4648203-C-T | 4780162-C-T | ** | ||||||
4779899-C-A | 4911858-C-A | ** | ||||||
4908650-T-C | 5040609-T-C | ** | ||||||
4919030-G-T | 5050989-G-T | ** | ||||||
4920108-T-A | 5052067-T-A | ** | ||||||
4920125-A-T | 5052084-A-T | ** | ||||||
4957588-T-C | 5089547-T-C | ** | ||||||
5214163-C-A | 5346122-C-A | Y10902 | ** | |||||
5220687-T-A | 5352646-T-A | ** | ||||||
5232343-G-T | 5364302-G-T | ** | ||||||
5393426-A-T | 5525385-A-T | ** | ||||||
5814141-T-C | 5946100-T-C | ** | ||||||
5822826-A-C | 5954785-A-C | ** | ||||||
5869646-C-A | 6001605-C-A | ** | ||||||
5874163-C-A | 6006122-C-A | ** | ||||||
5881065-G-T | 6013024-G-T | ** | ||||||
5924337-A-T | 6056296-A-T | ** | ||||||
6063520-C-A | 6195479-C-A | ** | ||||||
6142863-T-A | 6274822-T-A | IR3_Dst | ** | |||||
6310881-A-T | 6442840-A-T | IR3_Dst | ** | |||||
6333403-A-T | 6465362-A-T | IR3_Dst | ** | |||||
6333420-C-A | 6465379-C-A | IR3_Dst | ** | |||||
6333427-A-T | 6465386-A-T | IR3_Dst | ** | |||||
6397074-G-T | 6529033-G-T | ** | ||||||
6458221-T-A | 6590180-T-A | ** | ||||||
6489371-CAAA-C | 6621330-CAAA-C | 25×A | ** | |||||
6607975-T-G | 6739934-T-G | ** | ||||||
6687503-A-T | 6819462-A-T | ** | ||||||
6697109-C-A | 6829068-C-A | ** | ||||||
6697140-C-A | 6829099-C-A | ** | ||||||
6755874-A-G | 6887833-A-G | ** | ||||||
6784307-A-C | 6916266-A-C | ** | ||||||
6795210-C-A | 6927169-C-A | ** | ||||||
6903718-T-A | 7035677-T-A | ** | ||||||
6929213-A-C | 7061172-A-C | ** | ||||||
6930106-C-A | 7062065-C-A | ** | ||||||
7011454-A-C | 7143413-A-C | ** | ||||||
7016952-G-T | 7148911-G-T | ** | ||||||
7016982-A-C | 7148941-A-C | ** | ||||||
7019361-A-T | 7151320-A-T | ** | ||||||
7033352-C-T | 7165311-C-T | ** | ||||||
7062546-C-A | 7194505-C-A | ** | ||||||
7088159-C-A | 7220118-C-A | ** | ||||||
7093151-CA-T | 7225110-CA-T | ** | ||||||
7093156-G-A | 7225115-G-A | ** | ||||||
7093174-G-A | 7225133-G-A | FT75706 | ** | |||||
7093175-T-G | 7225134-T-G | ** | ||||||
7093183-T-C | 7225142-T-C | ** | ||||||
7093184-G-A | 7225143-G-A | ** | ||||||
7093208-A-G | 7225167-A-G | ** | ||||||
7093210-T-G | 7225169-T-G | ** | ||||||
7093217-G-C | 7225176-G-C | ** | ||||||
7093233-T-TG | 7225192-T-TG | ** | ||||||
7093244-A-T | 7225203-A-T | ** | ||||||
7132877-C-A | 7264836-C-A | ** | ||||||
7152684-A-T | 7284643-A-T | ** | ||||||
7154717-A-C | 7286676-A-C | ** | ||||||
7162150-C-A | 7294109-C-A | ** | ||||||
7241290-GCTTTAGTATGAAGGACCCCTAGTTGATAAACCATATATTTC-G | 7373249-GCTTTAGTATGAAGGACCCCTAGTTGATAAACCATATATTTC-G | ** | ||||||
7242723-A-T | 7374682-A-T | ** | ||||||
7242737-T-G | 7374696-T-G | ** | ||||||
7255011-G-T | 7386970-G-T | ** | ||||||
7370764-C-A | 7502723-C-A | ** | ||||||
7371883-G-T | 7503842-G-T | ** | ||||||
7374891-G-T | 7506850-G-T | ** | ||||||
7416672-C-T | 7548631-C-T | ** | ||||||
7424329-A-C | 7556288-A-C | ** | ||||||
7425255-T-A | 7557214-T-A | ** | ||||||
7617718-T-G | 7749677-T-G | ** | ||||||
7664852-T-A | 7796811-T-A | ** | ||||||
7994238-A-G | 8126197-A-G | ** | ||||||
7996030-G-T | 8127989-G-T | A17337 | ** | |||||
8100665-A-AT | 8232624-A-AT | ** | ||||||
8341919-A-C | 8473878-A-C | ** | ||||||
8556170-C-A | 8688129-C-A | ** | ||||||
8671389-T-C | 8803348-T-C | ** | ||||||
8908109-A-T | 9040068-A-T | ** | ||||||
8911690-G-T | 9043649-G-T | ** | ||||||
8981606-C-A | 9143997-C-A | ** | ||||||
9162877-T-G | 9325268-T-G | ** | ||||||
9162884-A-T | 9325275-A-T | ** | ||||||
9401181-C-A | 9563572-C-A | ** | ||||||
9559567-T-A | 9721958-T-A | IR3_Prx | ** | |||||
9654250-A-T | 9816641-A-T | IR3_Prx | ** | |||||
9849761-A-C | 10012152-A-C | ** | ||||||
9849768-T-C | 10012159-T-C | ** | ||||||
9849772-TC-T | 10012163-TC-T | ** | ||||||
9885168-A-C | 10047559-A-C | ** | ||||||
9937132-C-A | 10099523-C-A | A18101 | ** | |||||
9941366-A-T | 10103757-A-T | ** | ||||||
9959179-C-A | 10121570-C-A | ** | ||||||
9972547-A-T | 10134938-A-T | ** | ||||||
10669571-T-A | ** | |||||||
10673145-C-A | ** | |||||||
10678016-G-T | ** | |||||||
10683188-C-A | ** | |||||||
10684819-C-T | ** | |||||||
10693882-T-A | ** | |||||||
10693883-C-G | ** | |||||||
10693894-T-C | ** | |||||||
10693899-A-C | ** | |||||||
10693903-C-A | ** | |||||||
10693905-ATTTCC-A | ** | |||||||
10693920-A-T | ** | |||||||
10693981-C-T | ** | |||||||
10693998-T-A | ** | |||||||
10694017-A-ATTCCTTTCAAT | ** | |||||||
10694022-A-T | ** | |||||||
10694067-C-T | ** | |||||||
10755309-CTCCAA-C | ** | |||||||
10755544-A-C | ** | |||||||
10774174-C-A | ** | |||||||
10775311-C-A | ** | |||||||
10776866-C-A | ** | |||||||
10781308-C-G | ** | |||||||
10787321-A-T | ** | |||||||
10787332-C-T | ** | |||||||
10787364-C-CCACTG | ** | |||||||
10787369-C-A | ** | |||||||
10789546-C-T | ** | |||||||
10793592-C-G | ** | |||||||
10794533-G-T | ** | |||||||
10804147-C-A | ** | |||||||
10805107-C-G | ** | |||||||
10815168-C-A | ** | |||||||
10817407-T-C | ** | |||||||
10821849-CTCCGT-C | ** | |||||||
10822879-T-C | ** | |||||||
10822911-C-A | ** | |||||||
10825643-T-C | ** | |||||||
10828274-T-G | ** | |||||||
10837031-A-T | ** | |||||||
10838453-C-T | ** | |||||||
10839849-T-A | ** | |||||||
10840259-C-T | ** | |||||||
10840264-C-T | ** | |||||||
10861225-C-A | ** | |||||||
10861499-A-T | ** | |||||||
10880675-T-C | ** | |||||||
10880697-C-T | ** | |||||||
10880705-CTAAAT-C | ** | |||||||
10885092-C-G | ** | |||||||
10887056-C-A | ** | |||||||
10896098-T-A | ** | |||||||
10899044-C-T | ** | |||||||
10899056-A-T | ** | |||||||
10899074-C-G | ** | |||||||
10899120-C-G | ** | |||||||
10899131-T-A | ** | |||||||
10899141-T-A | ** | |||||||
10899144-C-CT | ** | |||||||
10901559-T-G | ** | |||||||
10906264-C-A | ** | |||||||
10910433-C-A | ** | |||||||
10913164-G-T | ** | |||||||
10919942-C-A | ** | |||||||
10929852-G-T | ** | |||||||
10931368-C-G | ** | |||||||
10935398-A-C | ** | |||||||
10938095-G-T | FT165137 | ** | ||||||
10943174-C-A | ** | |||||||
10965677-G-T | ** | |||||||
10969971-T-G | ** | |||||||
10972267-T-A | ** | |||||||
10973393-T-C | ** | |||||||
10976715-C-T | ** | |||||||
10981550-G-T | ** | |||||||
10983690-C-A | ** | |||||||
11022430-A-T | ** | |||||||
11026869-C-A | ** | |||||||
11026941-T-G | ** | |||||||
11026944-G-C | ** | |||||||
11026947-C-A | ** | |||||||
11027741-C-A | ** | |||||||
11029393-C-A | ** | |||||||
11030985-A-T | ** | |||||||
11031617-A-G | FT202850 | ** | ||||||
13222054-A-C | 11066378-A-C | ** | ||||||
13239681-T-G | 11084005-T-G | ** | ||||||
13242934-C-A | 11087258-C-A | ** | ||||||
13243485-C-A | 11087809-C-A | ** | ||||||
13273815-C-A | 11118139-C-A | ** | ||||||
13461523-T-A | 11305847-T-A | ** | ||||||
13513032-A-G | 11357356-A-G | ** | ||||||
13717492-A-T | 11561816-A-T | DYZ17 | ** | |||||
13717738-T-G | 11562062-T-G | DYZ17 | ** | |||||
13719609-G-T | 11563933-G-T | DYZ17 | ** | |||||
13719614-C-A | 11563938-C-A | DYZ17 | ** | |||||
11650514-C-A | DYZ17 | ** | ||||||
11652989-AGAATG-A | DYZ17 | ** | ||||||
11654092-G-A | DYZ17 | ** | ||||||
11654332-T-C | DYZ17 | ** | ||||||
13880278-T-A | 11759572-T-A | ** | ||||||
13898787-GT-G | 11778081-GT-G | ** | ||||||
13927982-G-A | 11807276-G-A | FTB41305 | ** | |||||
13939158-C-A | 11818452-C-A | ** | ||||||
13940489-G-T | 11819783-G-T | ** | ||||||
13940573-G-T | 11819867-G-T | ** | ||||||
13958683-C-A | 11837977-C-A | ** | ||||||
13969656-G-T | 11848950-G-T | ** | ||||||
13976099-G-A | 11855393-G-A | ** | ||||||
14002761-C-A | 11882055-C-A | ** | ||||||
14008819-T-G | 11888113-T-G | ** | ||||||
14011951-G-T | 11891245-G-T | ** | ||||||
14025755-G-T | 11905049-G-T | ** | ||||||
14035124-A-T | 11914418-A-T | ** | ||||||
14038195-A-T | 11917489-A-T | ** | ||||||
14055543-T-G | 11934837-T-G | ** | ||||||
14108915-C-A | 11988209-C-A | ** | ||||||
14316187-T-A | 12195481-T-A | ** | ||||||
14396618-G-T | 12275914-G-T | ** | ||||||
14420191-T-G | 12299466-T-G | ** | ||||||
14422859-C-A | 12302134-C-A | ** | ||||||
14451959-C-A | 12331232-C-A | ** | ||||||
14458470-A-C | 12337743-A-C | ** | ||||||
14491013-T-G | 12370282-T-G | ** | ||||||
14561835-C-A | 12450036-C-A | ** | ||||||
14581024-C-A | 12469224-C-A | ** | ||||||
14719884-G-T | 12607952-G-T | ** | ||||||
14762350-T-G | 12650419-T-G | ** | ||||||
14799764-A-T | 12687835-A-T | ** | ||||||
14824828-T-C | 12712895-T-C | ** | ||||||
15074654-C-A | 12962744-C-A | ** | ||||||
15074696-T-G | 12962786-T-G | ** | ||||||
15076402-C-A | 12964492-C-A | ** | ||||||
15116476-T-A | 13004563-T-A | ** | ||||||
15116480-A-T | 13004567-A-T | ** | ||||||
15116518-C-A | 13004605-C-A | ** | ||||||
15181709-C-A | 13069795-C-A | ** | ||||||
15249101-C-A | 13137187-C-A | ** | ||||||
15259128-T-G | 13147212-T-G | ** | ||||||
15276531-G-T | 13164620-G-T | ** | ||||||
15276567-G-T | 13164656-G-T | ** | ||||||
15317440-A-C | 13205546-A-C | ** | ||||||
15336624-T-A | 13224742-T-A | ** | ||||||
15369151-C-A | 13257271-C-A | ** | ||||||
15376311-C-A | 13264431-C-A | ** | ||||||
15393948-T-C | 13282068-T-C | ** | ||||||
15430645-C-A | 13318765-C-A | ** | ||||||
15435173-G-T | 13323293-G-T | ** | ||||||
15536537-C-A | 13424657-C-A | ** | ||||||
15650473-T-G | 13538593-T-G | ** | ||||||
15698453-C-T | 13586573-C-T | ** | ||||||
15913905-A-T | 13802025-A-T | ** | ||||||
15918357-C-A | 13806477-C-A | ** | ||||||
15950206-C-A | 13838326-C-A | ** | ||||||
16033371-T-G | 13921491-T-G | ** | ||||||
16033382-A-T | 13921502-A-T | ** | ||||||
16039386-C-A | 13927506-C-A | ** | ||||||
16079159-T-G | 13967279-T-G | ** | ||||||
16085374-C-A | 13973494-C-A | BY26392 | ** | |||||
16096333-G-T | 13984453-G-T | P8_Prx | ** | |||||
16102030-T-G | 13990150-T-G | P8_Prx | ** | |||||
16227995-G-T | 14116115-G-T | ** | ||||||
16271901-T-G | 14160021-T-G | ** | ||||||
16478287-C-A | 14366407-C-A | ** | ||||||
16524956-G-T | 14413076-G-T | ** | ||||||
16545628-A-ATT | 14433748-A-ATT | 15×T | ** | |||||
16562834-T-A | 14450954-T-A | ** | ||||||
16574008-C-G | 14462128-C-G | ** | ||||||
16574018-C-T | 14462138-C-T | ** | ||||||
16574023-T-A | 14462143-T-A | ** | ||||||
16574029-A-T | 14462149-A-T | ** | ||||||
16578217-G-C | 14466337-G-C | ** | ||||||
16734822-T-A | 14622942-T-A | ** | ||||||
16784373-C-A | 14672493-C-A | ** | ||||||
16838939-C-A | 14727059-C-A | ** | ||||||
16874671-C-A | 14762791-C-A | ** | ||||||
16936038-C-A | 14824158-C-A | ** | ||||||
16988748-C-A | 14876868-C-A | ** | ||||||
17030905-G-T | 14919025-G-T | ** | ||||||
17083034-CTTTT-C | 14971154-CTTTT-C | ** | ||||||
17187378-C-A | 15075498-C-A | ** | ||||||
17362944-A-C | 15251064-A-C | ** | ||||||
17375443-G-T | 15263563-G-T | ** | ||||||
17513225-T-A | 15401345-T-A | ** | ||||||
17534655-C-G | 15422775-C-G | ** | ||||||
17707375-TCA-T | 15595495-TCA-T | ** | ||||||
17709273-G-A | 15597393-G-A | ** | ||||||
17821860-G-A | 15709980-G-A | ** | ||||||
17874271-T-A | 15762391-T-A | ** | ||||||
17874288-T-A | 15762408-T-A | ** | ||||||
17874306-A-T | 15762426-A-T | ** | ||||||
17897926-C-A | 15786046-C-A | ** | ||||||
18007566-C-A | 15895686-C-A | P7_Gap | ** | |||||
18007567-T-A | 15895687-T-A | P7_Gap | ** | |||||
18007577-G-T | 15895697-G-T | P7_Gap | ** | |||||
18007583-G-T | 15895703-G-T | P7_Gap | ** | |||||
18052776-C-A | 15940896-C-A | ** | ||||||
18124283-A-G | 16012403-A-G | ** | ||||||
18124802-T-A | 16012922-T-A | ** | ||||||
18212012-G-T | 16100132-G-T | ** | ||||||
18226130-C-A | 16114250-C-A | ** | ||||||
18243411-C-A | 16131531-C-A | ** | ||||||
18244481-C-A | 16132601-C-A | ** | ||||||
18246368-G-T | 16134488-G-T | ** | ||||||
18390020-A-C | 16278140-A-C | P6_Gap | ** | |||||
18391162-C-A | 16279282-C-A | FTB29575 | P6_Gap | ** | ||||
18395932-G-A | 16284052-G-A | P6_Gap | ** | |||||
18412327-G-C | 16300447-G-C | P6_Gap | ** | |||||
18512560-A-T | 16400680-A-T | P6_Dst | ** | |||||
18558196-C-A | 16446316-C-A | ** | ||||||
18614482-C-A | 16502602-C-A | ** | ||||||
18628083-C-A | 16516203-C-A | ** | ||||||
18636613-T-A | 16524733-T-A | ** | ||||||
18739554-C-A | 16627674-C-A | ** | ||||||
18749317-C-A | 16637437-C-A | ** | ||||||
18769555-C-A | 16657675-C-A | ** | ||||||
18775687-C-T | 16663807-C-T | ** | ||||||
18800991-C-A | 16689111-C-A | ** | ||||||
18801006-C-T | 16689126-C-T | ** | ||||||
18825736-C-A | 16713856-C-A | ** | ||||||
18895216-G-T | 16783336-G-T | ** | ||||||
18963542-G-C | 16851662-G-C | ** | ||||||
18976217-G-T | 16864337-G-T | ** | ||||||
18978654-A-T | 16866774-A-T | ** | ||||||
18981207-G-T | 16869327-G-T | ** | ||||||
19053407-C-G | 16941527-C-G | ** | ||||||
19125680-G-T | 17013800-G-T | ** | ||||||
19231319-CTTTTT-C | 17119439-CTTTTT-C | 24×T | ** | |||||
19268260-T-G | 17156380-T-G | ** | ||||||
19345350-C-A | 17233470-C-A | ** | ||||||
19361046-C-G | 17249166-C-G | ** | ||||||
19398843-T-A | 17286963-T-A | ** | ||||||
19422971-T-A | 17311091-T-A | ** | ||||||
19524609-C-A | 17412729-C-A | ** | ||||||
19537127-T-A | 17425247-T-A | ** | ||||||
19585831-ATTT-A | 17473951-ATTT-A | P5_Prx | ** | |||||
19619115-T-A | 17507235-T-A | P5_Prx | ** | |||||
19689615-T-TG | 17577735-T-TG | P5_Prx | ** | |||||
19733400-C-A | 17621520-C-A | P5_Prx | ** | |||||
19733403-G-T | 17621523-G-T | P5_Prx | ** | |||||
19847599-G-C | 17735719-G-C | P5_Prx | ** | |||||
19913933-A-T | 17802053-A-T | P5_Prx | ** | |||||
19954393-A-T | 17842513-A-T | P5_Prx | ** | |||||
19954410-A-T | 17842530-A-T | P5_Prx | ** | |||||
19954420-A-T | 17842540-A-T | P5_Prx | ** | |||||
20348016-T-TA | 18186130-T-TA | P5_Dst | ** | |||||
20348086-T-A | 18186200-T-A | P5_Dst | ** | |||||
20579204-T-A | 18417318-T-A | P5_Dst | ** | |||||
20579209-C-A | 18417323-C-A | P5_Dst | ** | |||||
20579228-T-A | 18417342-T-A | P5_Dst | ** | |||||
20579232-T-G | 18417346-T-G | P5_Dst | ** | |||||
20811840-T-G | 18649954-T-G | P4_Gap | ** | |||||
20826397-C-CTT | 18664511-C-CTT | P4_Gap | 17×T | ** | ||||
21262200-T-A | 19100314-T-A | ** | ||||||
21297832-A-T | 19135946-A-T | ** | ||||||
21388663-C-A | 19226777-C-A | ** | ||||||
21473659-C-A | 19311773-C-A | ** | ||||||
21491285-C-A | 19329399-C-A | ** | ||||||
21499048-TA-T | 19337162-TA-T | 9×A | ** | |||||
21556669-G-T | 19394783-G-T | ** | ||||||
21561699-T-A | 19399813-T-A | ** | ||||||
21563771-C-A | 19401885-C-A | ** | ||||||
21616760-T-G | 19454874-T-G | ** | ||||||
21737843-C-A | 19575957-C-A | ** | ||||||
21809914-C-A | 19648028-C-A | ** | ||||||
21834228-G-A | 19672342-G-A | Y77224 | ** | |||||
21875308-C-A | 19713422-C-A | ** | ||||||
22027715-C-T | 19865829-C-T | ** | ||||||
22060471-C-A | 19898585-C-A | ** | ||||||
22076930-T-G | 19915044-T-G | ** | ||||||
22077019-C-A | 19915133-C-A | ** | ||||||
22077352-A-C | 19915466-A-C | ** | ||||||
22085440-C-A | 19923554-C-A | ** | ||||||
22095763-T-C | 19933877-T-C | ** | ||||||
22130313-T-A | 19968427-T-A | ** | ||||||
22176271-G-C | 20014385-G-C | ** | ||||||
22202492-C-A | 20040606-C-A | ** | ||||||
22204376-C-A | 20042490-C-A | ** | ||||||
22287093-AG-A | 20125207-AG-A | DYZ19 | ** | |||||
22287100-A-G | 20125214-A-G | DYZ19 | ** | |||||
22451309-T-G | 20289423-T-G | DYZ19 | ** | |||||
22451323-C-A | 20289437-C-A | DYZ19 | ** | |||||
22451341-G-A | 20289455-G-A | DYZ19 | ** | |||||
22730275-C-A | 20568389-C-A | ** | ||||||
22739648-A-T | 20577762-A-T | ** | ||||||
22801860-C-A | 20639974-C-A | ** | ||||||
22816176-A-C | 20654290-A-C | ** | ||||||
22903832-G-T | 20741946-G-T | ** | ||||||
23120032-A-C | 20958146-A-C | ** | ||||||
23198829-C-A | 21036943-C-A | ** | ||||||
23204387-T-G | 21042501-T-G | ** | ||||||
23257884-C-A | 21095998-C-A | ** | ||||||
23293594-GTGTGTATATATATATA-G | 21131708-GTGTGTATATATATATA-G | ** | ||||||
23327263-C-A | 21165377-C-A | ** | ||||||
23327271-C-A | 21165385-C-A | ** | ||||||
23464682-G-T | 21302796-G-T | ** | ||||||
23473388-G-T | 21311502-G-T | ** | ||||||
23493532-G-T | 21331646-G-T | ** | ||||||
23597943-T-C | 21436057-T-C | ** | ||||||
23808161-A-T | 21646275-A-T | ** | ||||||
23838559-T-A | 21676673-T-A | ** | ||||||
21750889-G-T | ** | |||||||
21754397-G-T | ** | |||||||
24267703-A-C | 22121556-A-C | P3_b1 | ** | |||||
24341708-A-C | 22195561-A-C | P3_t1 | ** | |||||
24341711-A-T | 22195564-A-T | P3_t1 | ** | |||||
24341725-A-C | 22195578-A-C | P3_t1 | ** | |||||
24341739-A-T | 22195592-A-T | P3_t1 | ** | |||||
24341745-A-C | 22195598-A-C | P3_t1 | ** | |||||
24341756-A-T | 22195609-A-T | P3_t1 | ** | |||||
24363601-C-A | 22217454-C-A | ** | ||||||
24402451-C-A | 22256304-C-A | ** | ||||||
25932476-T-A | 23786329-T-A | P1_Y1 | ** | |||||
25932491-T-A | 23786344-T-A | P1_Y1 | ** | |||||
26032887-C-G | 23886740-C-G | P1_Y1 | ** | |||||
26314651-C-T | 24168504-C-T | P1_Y1 | ** | |||||
26314860-T-G | 24168713-T-G | P1_Y1 | ** | |||||
26421492-G-T | 24275345-G-T | P1_Y1 | ** | |||||
27424134-C-A | 25277987-C-A | P1_g3 | ** | |||||
27424138-G-T | 25277991-G-T | P1_g3 | ** | |||||
27424144-T-A | 25277997-T-A | P1_g3 | ** | |||||
27424168-T-A | 25278021-T-A | P1_g3 | ** | |||||
27838557-C-A | 25692410-C-A | P1_Y2 | ** | |||||
27889242-C-T | 25743095-C-T | P1_Y2 | ** | |||||
27936326-A-AT | 25790179-A-AT | P1_Y2 | ** | |||||
28500090-G-T | 26353943-G-T | ** | ||||||
28517217-C-A | 26371070-C-A | ** | ||||||
28542443-A-T | 26396296-A-T | ** | ||||||
28561834-TTTACTATTAAATATTAC-T | 26415687-TTTACTATTAAATATTAC-T | ** | ||||||
28570340-A-C | 26424193-A-C | ** | ||||||
28591278-T-G | 26445131-T-G | ** | ||||||
28693637-C-A | 26547490-C-A | ** | ||||||
28784618-T-C | 26638471-T-C | ** | ||||||
28784624-C-T | 26638477-C-T | ** | ||||||
56849967-G-T | ** | |||||||
56859015-T-C | ** | |||||||
56859016-G-A | ** | |||||||
17764068-AAATT-A | 15652188-AAATT-A | A5388 | 7×AATT | *** | ||||
15989092-CA-C | 13877212-CA-C | 10×A | *** | |||||
13236473-T-C | 11080797-T-C | PF2327 | *** | |||||
18036576-T-G | 15924696-T-G | *** | ||||||
19132676-CA-C | 17020796-CA-C | 8×A | *** | |||||
13448317-CTCCATTCCAG-C | 11292641-CTCCATTCCAG-C | *** | ||||||
21209036-T-C | 19047150-T-C | *** | ||||||
5842278-GA-G | 5974237-GA-G | 10×A | *** | |||||
10791278-A-C | *** | |||||||
10791287-A-C | *** | |||||||
10791290-C-T | *** | |||||||
10791303-C-G | *** | |||||||
7518493-CAA-C,CA | 7650452-CAA-C,CA | 19×A | *** | |||||
23207965-CT-C | 21046079-CT-C | 10×T | *** | |||||
8705698-CT-C,CTT | 8837657-CT-C,CTT | 16×T | *** | |||||
15947930-C-A | 13836050-C-A | *** | ||||||
21220240-CTTT-C,CTTTT | 19058354-CTTT-C,CTTTT | 19×T | *** | |||||
10673870-T-G | *** | |||||||
13521039-GATAT-G,GATATAT | 11365363-GATAT-G,GATATAT | 10×AT | *** | |||||
5524481-AT-A,ATT | 5656440-AT-A,ATT | 13×T | *** | |||||
10999890-A-T | *** | |||||||
10882046-A-G | *** | |||||||
7761047-GA-G | 7893006-GA-G | 9×A | *** | |||||
18263587-C-A | 16151707-C-A | *** | ||||||
21230024-C-A | 19068138-C-A | *** | ||||||
10694064-C-T | *** | |||||||
18222556-C-A | 16110676-C-A | *** | ||||||
2649802-C-CA | 2781761-C-CA | 24×A | *** | |||||
2783080-C-A | 2915039-C-A | *** | ||||||
3131151-C-CAGAT,CAGATAGAT | 3263110-C-CAGAT,CAGATAGAT | 12×AGAT | *** | |||||
3621616-A-G | 3753575-A-G | *** | ||||||
3627547-C-A | 3759506-C-A | *** | ||||||
5393380-A-G | 5525339-A-G | *** | ||||||
6120358-C-A | 6252317-C-A | *** | ||||||
6675797-C-A | 6807756-C-A | *** | ||||||
6675843-GAA-G,GAAA | 6807802-GAA-G,GAAA | 12×A | *** | |||||
7201743-C-A | 7333702-C-A | *** | ||||||
7250294-A-G | 7382253-A-G | *** | ||||||
7515525-C-A | 7647484-C-A | *** | ||||||
7981616-C-A | 8113575-C-A | *** | ||||||
8093643-C-T | 8225602-C-T | *** | ||||||
8134469-C-A | 8266428-C-A | *** | ||||||
8169126-C-A | 8301085-C-A | *** | ||||||
8466074-C-A | 8598033-C-A | *** | ||||||
8880918-G-A | 9012877-G-A | *** | ||||||
9023438-AT-A | 9185829-AT-A | *** | ||||||
9041520-C-T | 9203911-C-T | *** | ||||||
9522072-C-A | 9684463-C-A | *** | ||||||
9989932-G-T | 10152323-G-T | *** | ||||||
10661111-C-A | *** | |||||||
10686888-C-A | *** | |||||||
10791315-C-A | *** | |||||||
10885097-C-A | *** | |||||||
10938623-C-A | *** | |||||||
10976703-T-A | *** | |||||||
11022123-T-G | *** | |||||||
13294157-C-A | 11138481-C-A | *** | ||||||
13430354-C-A | 11274678-C-A | *** | ||||||
13486752-G-T | 11331076-G-T | *** | ||||||
11642972-C-A | DYZ17 | *** | ||||||
11668576-A-G | DYZ17 | *** | ||||||
13940948-G-A | 11820242-G-A | *** | ||||||
14147303-C-A | 12026597-C-A | *** | ||||||
14171798-A-G | 12051092-A-G | *** | ||||||
14285867-C-A | 12165161-C-A | *** | ||||||
14833184-G-A | 12721251-G-A | *** | ||||||
14889015-C-A | 12777081-C-A | *** | ||||||
14953135-C-A | 12841209-C-A | *** | ||||||
15208800-C-A | 13096886-C-A | *** | ||||||
15255001-C-T | 13143087-C-T | *** | ||||||
15546162-A-C | 13434282-A-C | *** | ||||||
15588715-CAA-C,CAAA | 13476835-CAA-C,CAAA | 14×A | *** | |||||
15904366-C-A | 13792486-C-A | *** | ||||||
16422145-G-A | 14310265-G-A | *** | ||||||
16533154-C-A | 14421274-C-A | A16409 | *** | |||||
16770438-C-A | 14658558-C-A | *** | ||||||
16874064-C-A | 14762184-C-A | *** | ||||||
17115265-TGAGGG-T | 15003385-TGAGGG-T | *** | ||||||
17943727-C-A | 15831847-C-A | *** | ||||||
18412413-G-T | 16300533-G-T | P6_Gap | *** | |||||
18413358-AT-A | 16301478-AT-A | P6_Gap | 9×T | *** | ||||
18742839-C-A | 16630959-C-A | *** | ||||||
18898310-C-G | 16786430-C-G | *** | ||||||
19113657-T-C | 17001777-T-C | *** | ||||||
19225754-C-A | 17113874-C-A | *** | ||||||
19294129-C-A | 17182249-C-A | *** | ||||||
19397142-AAT-A | 17285262-AAT-A | *** | ||||||
19526500-C-A | 17414620-C-A | *** | ||||||
21190875-CT-C,CTT | 19028989-CT-C,CTT | 13×T | *** | |||||
21362486-C-A | 19200600-C-A | *** | ||||||
21813991-C-A | 19652105-C-A | *** | ||||||
21889702-TA-T | 19727816-TA-T | *** | ||||||
21947283-C-A | 19785397-C-A | *** | ||||||
21948639-G-A | 19786753-G-A | *** | ||||||
22698738-C-A | 20536852-C-A | *** | ||||||
23327229-C-A | 21165343-C-A | *** | ||||||
23377722-G-A | 21215836-G-A | *** | ||||||
28600819-C-A | 26454672-C-A | *** | ||||||
28658301-G-T | 26512154-G-T | *** | ||||||
56842100-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.