Brown
BigY2: 125139MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 125139 |
---|---|---|---|---|---|---|---|---|
26401991-C-T | 24255844-C-T | P1_Y1 | A* | |||||
22454248-G-A | 20292362-G-A | DYZ19 | A* | |||||
22306194-A-C | 20144308-A-C | DYZ19 | A* | |||||
6107214-T-G | 6239173-T-G | A* | ||||||
25947067-A-G | 23800920-A-G | P1_Y1 | A* | |||||
2756036-TC-T | 2887995-TC-T | + | ||||||
2747656-A-G | 2879615-A-G | Y136903 | Y | Y | + | |||
15580330-C-T | 13468450-C-T | Y68494 | Y | Y | + | |||
22461685-C-A | 20299799-C-A | BY220726 | DYZ19 | + | ||||
6974194-T-A | 7106153-T-A | Y136887 | Y | Y | + | |||
22479441-T-G | 20317555-T-G | DYZ19 | + | |||||
18940289-G-A | 16828409-G-A | Y136904 | Y | Y | + | |||
22508631-G-T | 20346745-G-T | BY171817 | DYZ19 | + | ||||
8529913-C-T | 8661872-C-T | Y136877 | Y | Y | + | |||
22508643-G-C | 20346757-G-C | BY196894 | DYZ19 | + | ||||
22508652-T-A | 20346766-T-A | BY44088 | DYZ19 | + | ||||
22508654-T-G | 20346768-T-G | BY44090 | DYZ19 | + | ||||
19033297-T-C | 16921417-T-C | Y136891 | Y | Y | + | |||
23955670-C-A | 21809523-C-A | Y136881 | + | |||||
23871115-T-C | 21709229-T-C | Y136893 | Y | + | ||||
9132573-G-T | 9294964-G-T | Y136872 | Y | + | ||||
16906158-T-G | 14794278-T-G | Y136901 | Y | Y | + | |||
19348207-C-A | 17236327-C-A | Y136871 | Y | Y | + | |||
19416046-G-A | 17304166-G-A | Y136886 | Y | + | ||||
21168287-G-A | 19006401-G-A | Y136870 | Y | Y | + | |||
24444958-C-T | 22298811-C-T | FGC37926 BY2274 | Y | + | ||||
6947759-C-CT | 7079718-C-CT | 9×T | + | |||||
17756317-G-A | 15644437-G-A | Y136894 | Y | Y | + | |||
14920590-G-A | 12808655-G-A | Y40729 | Y | Y | + | |||
21749505-T-G | 19587619-T-G | Y136879 | Y | Y | + | |||
15024514-G-A | 12912602-G-A | Y136874 | Y | Y | + | |||
17956935-A-C | 15845055-A-C | Y136876 | Y | Y | + | |||
7596400-C-T | 7728359-C-T | Y136869 | Y | Y | + | |||
22508653-T-A | 20346767-T-A | BY44089 | DYZ19 | + | ||||
18421099-G-T | 16309219-G-T | Y136896 | P6_Gap | + | ||||
21127732-C-T | 18965846-C-T | Y136897 | Y | Y | + | |||
21566422-C-A | 19404536-C-A | Y136873 | Y | Y | + | |||
14835658-G-A | 12723725-G-A | Y136867 | Y | Y | + | |||
20827124-C-T | 18665238-C-T | Y136875 | P4_Gap | + | ||||
22340705-G-T | 20178819-G-T | DYZ19 | * | |||||
22230375-A-T | 20068489-A-T | DYZ19 | * | |||||
22281299-A-C | 20119413-A-C | BY216017 | DYZ19 | * | ||||
22281298-G-T | 20119412-G-T | BY216016 | DYZ19 | * | ||||
22264183-A-T | 20102297-A-T | DYZ19 | * | |||||
13647971-G-A | 11492295-G-A | * | ||||||
13647966-G-GAATGAAATGGACTCA | 11492290-G-GAATGAAATGGACTCA | * | ||||||
22225395-C-T | 20063509-C-T | Y6789 | DYZ19 | * | ||||
28810862-G-T | 26664715-G-T | * | ||||||
16462739-C-A | 14350859-C-A | ** | ||||||
16305823-G-T | 14193943-G-T | ** | ||||||
16305769-C-CAAA | 14193889-C-CAAA | ** | ||||||
16290803-A-ACACCAC | 14178923-A-ACACCAC | ** | ||||||
16318725-G-T | 14206845-G-T | ** | ||||||
16305806-T-C | 14193926-T-C | ** | ||||||
16305790-T-C | 14193910-T-C | ** | ||||||
16307670-C-A | 14195790-C-A | ** | ||||||
16278673-C-A | 14166793-C-A | ** | ||||||
22868285-T-A | 20706399-T-A | 27×A | ** | |||||
16270700-G-T | 14158820-G-T | ** | ||||||
16020717-G-A | 13908837-G-A | ** | ||||||
15870595-C-T | 13758715-C-T | Z44417 | ** | |||||
15894581-G-A | 13782701-G-A | ** | ||||||
15894596-A-G | 13782716-A-G | ** | ||||||
15894600-G-A | 13782720-G-A | ** | ||||||
15894605-A-C | 13782725-A-C | ** | ||||||
15894634-T-C | 13782754-T-C | ** | ||||||
16005313-T-G | 13893433-T-G | ** | ||||||
16033712-C-A | 13921832-C-A | ** | ||||||
16211127-A-C | 14099247-A-C | ** | ||||||
16056070-G-C | 13944190-G-C | ** | ||||||
16060047-C-T | 13948167-C-T | ** | ||||||
16528364-C-A | 14416484-C-A | ** | ||||||
16060297-T-G | 13948417-T-G | ** | ||||||
16060312-C-T | 13948432-C-T | ** | ||||||
16211038-T-A | 14099158-T-A | ** | ||||||
16211067-T-G | 14099187-T-G | ** | ||||||
16211124-G-C | 14099244-G-C | ** | ||||||
16471640-G-C | 14359760-G-C | ** | ||||||
16763855-C-A | 14651975-C-A | ** | ||||||
16540072-C-A | 14428192-C-A | ** | ||||||
17561344-G-A | 15449464-G-A | ** | ||||||
17376741-A-T | 15264861-A-T | ** | ||||||
17380603-A-C | 15268723-A-C | ** | ||||||
17386733-C-A | 15274853-C-A | ** | ||||||
17413338-T-A | 15301458-T-A | ** | ||||||
17414867-A-T | 15302987-A-T | ** | ||||||
17464737-G-T | 15352857-G-T | FT243408 | ** | |||||
17494617-C-T | 15382737-C-T | ** | ||||||
17512459-A-G | 15400579-A-G | ** | ||||||
17524185-C-A | 15412305-C-A | ** | ||||||
17567369-A-T | 15455489-A-T | ** | ||||||
17280087-G-T | 15168207-G-T | ** | ||||||
17569101-C-A | 15457221-C-A | ** | ||||||
17580695-C-A | 15468815-C-A | ** | ||||||
17638151-T-C | 15526271-T-C | ** | ||||||
17638225-C-A | 15526345-C-A | ** | ||||||
17641438-G-T | 15529558-G-T | ** | ||||||
17692172-C-A | 15580292-C-A | ** | ||||||
17713884-C-A | 15602004-C-A | ** | ||||||
17770225-G-T | 15658345-G-T | ** | ||||||
18019855-G-T | 15907975-G-T | ** | ||||||
17354771-A-G | 15242891-A-G | Y136878 | ** | |||||
17277916-C-A | 15166036-C-A | ** | ||||||
16572817-C-A | 14460937-C-A | ** | ||||||
15865626-C-T | 13753746-C-T | ** | ||||||
16578189-C-A | 14466309-C-A | ** | ||||||
16603432-C-A | 14491552-C-A | ** | ||||||
16651996-G-T | 14540116-G-T | ** | ||||||
16654718-G-A | 14542838-G-A | ** | ||||||
16662423-C-A | 14550543-C-A | ** | ||||||
16673115-C-T | 14561235-C-T | ** | ||||||
16680653-T-C | 14568773-T-C | ** | ||||||
16747501-C-T | 14635621-C-T | ** | ||||||
16760090-C-A | 14648210-C-A | ** | ||||||
16778033-C-T | 14666153-C-T | ** | ||||||
17218253-A-C | 15106373-A-C | ** | ||||||
16781371-C-A | 14669491-C-A | ** | ||||||
16824903-T-A | 14713023-T-A | ** | ||||||
16842552-C-A | 14730672-C-A | ** | ||||||
16930693-G-T | 14818813-G-T | ** | ||||||
16931951-C-A | 14820071-C-A | ** | ||||||
16938214-TTTTC-T | 14826334-TTTTC-T | ** | ||||||
16962699-C-T | 14850819-C-T | ** | ||||||
17083033-T-A | 14971153-T-A | ** | ||||||
17210013-C-A | 15098133-C-A | ** | ||||||
17210117-A-G | 15098237-A-G | ** | ||||||
15866874-C-A | 13754994-C-A | ** | ||||||
15588740-T-C | 13476860-T-C | ** | ||||||
15865615-A-C | 13753735-A-C | ** | ||||||
14352212-C-A | 12231507-C-A | ** | ||||||
14249175-TG-T | 12128469-TG-T | ** | ||||||
14283245-T-G | 12162539-T-G | ** | ||||||
14289604-T-C | 12168898-T-C | ** | ||||||
14296411-C-G | 12175705-C-G | ** | ||||||
14302099-T-G | 12181393-T-G | ** | ||||||
14302105-T-G | 12181399-T-G | ** | ||||||
14302203-G-T | 12181497-G-T | ** | ||||||
14305358-G-T | 12184652-G-T | ** | ||||||
14330795-C-T | 12210089-C-T | ** | ||||||
14379059-A-C | 12258355-A-C | ** | ||||||
14200854-C-A | 12080148-C-A | ** | ||||||
14379064-C-A | 12258360-C-A | ** | ||||||
14391698-A-T | 12270994-A-T | ** | ||||||
14457575-C-T | 12336848-C-T | ** | ||||||
14471660-C-A | 12350929-C-A | ** | ||||||
14490365-A-G | 12369634-A-G | ** | ||||||
14511424-C-T | 12399629-C-T | ** | ||||||
14533334-C-A | 12421535-C-A | ** | ||||||
14537747-C-A | 12425948-C-A | ** | ||||||
14538662-C-A | 12426863-C-A | ** | ||||||
14234654-G-A | 12113948-G-A | ** | ||||||
14196434-C-T | 12075728-C-T | ** | ||||||
14606299-C-A | 12494501-C-A | ** | ||||||
13898754-GTTTTTTT-G | 11778048-GTTTTTTT-G | 26×T | ** | |||||
13325958-G-T | 11170282-G-T | ** | ||||||
13422399-A-T | 11266723-A-T | ** | ||||||
13491616-C-A | 11335940-C-A | ** | ||||||
13594392-C-A | 11438716-C-A | ** | ||||||
13596446-C-A | 11440770-C-A | ** | ||||||
13705408-A-G | 11549732-A-G | ** | ||||||
13721305-G-A | 11565629-G-A | ** | ||||||
11658647-G-T | ** | |||||||
11675567-G-T | FT183052 | ** | ||||||
13927841-C-G | 11807135-C-G | ** | ||||||
14184339-C-G | 12063633-C-G | ** | ||||||
13935630-A-C | 11814924-A-C | ** | ||||||
13974198-G-T | 11853492-G-T | ** | ||||||
13994966-GA-G | 11874260-GA-G | ** | ||||||
14038003-C-A | 11917297-C-A | ** | ||||||
14078872-G-T | 11958166-G-T | ** | ||||||
14079788-C-A | 11959082-C-A | ** | ||||||
14088428-T-G | 11967722-T-G | ** | ||||||
14149285-C-A | 12028579-C-A | ** | ||||||
14151587-T-G | 12030881-T-G | ** | ||||||
14152261-G-A | 12031555-G-A | ** | ||||||
14548107-T-G | 12436308-T-G | ** | ||||||
14635748-G-T | 12523817-G-T | ** | ||||||
15865549-C-A | 13753669-C-A | 22×T | ** | |||||
15635794-G-A | 13523914-G-A | ** | ||||||
15380212-T-G | 13268332-T-G | ** | ||||||
15396495-G-A | 13284615-G-A | ** | ||||||
15406927-T-G | 13295047-T-G | ** | ||||||
15423745-T-C | 13311865-T-C | ** | ||||||
15430718-C-A | 13318838-C-A | ** | ||||||
15449923-T-G | 13338043-T-G | ** | ||||||
15575178-C-A | 13463298-C-A | ** | ||||||
18019858-A-C | 15907978-A-C | ** | ||||||
15588745-G-C | 13476865-G-C | ** | ||||||
15683770-G-A | 13571890-G-A | ** | ||||||
15358665-G-A | 13246784-G-A | ** | ||||||
15699885-T-G | 13588005-T-G | ** | ||||||
15776049-C-A | 13664169-C-A | ** | ||||||
15801651-A-C | 13689771-A-C | ** | ||||||
15831571-C-A | 13719691-C-A | ** | ||||||
15859428-G-T | 13747548-G-T | ** | ||||||
15860032-G-A | 13748152-G-A | BY162038 | ** | |||||
15860043-T-G | 13748163-T-G | ** | ||||||
15860051-C-G | 13748171-C-G | ** | ||||||
15860052-A-T | 13748172-A-T | ** | ||||||
15860055-T-A | 13748175-T-A | ** | ||||||
15371014-C-A | 13259134-C-A | Y68132 | ** | |||||
15324359-GA-C | 13212477-GA-C | ** | ||||||
14717693-C-T | 12605761-C-T | ** | ||||||
15045814-A-T | 12933904-A-T | ** | ||||||
14717728-C-A | 12605796-C-A | ** | ||||||
14717733-C-A | 12605801-C-A | ** | ||||||
14741904-G-T | 12629972-G-T | ** | ||||||
14743931-T-A | 12632000-T-A | ** | ||||||
14776921-T-C | 12664990-T-C | ** | ||||||
14776956-C-T | 12665025-C-T | ** | ||||||
14785684-C-A | 12673754-C-A | ** | ||||||
14893972-C-CTT | 12782038-C-CTT | 11×T | ** | |||||
14910936-A-T | 12799003-A-T | ** | ||||||
15065804-T-C | 12953896-T-C | ** | ||||||
15324353-AT-A | 13212471-AT-A | ** | ||||||
15126268-C-A | 13014355-C-A | ** | ||||||
15126791-T-C | 13014878-T-C | ** | ||||||
15132135-C-A | 13020222-C-A | ** | ||||||
15151767-A-C | 13039854-A-C | ** | ||||||
15161167-C-A | 13049253-C-A | ** | ||||||
15242574-C-A | 13130660-C-A | ** | ||||||
15259337-T-G | 13147421-T-G | ** | ||||||
15264744-A-G | 13152833-A-G | ** | ||||||
15285862-C-A | 13173961-C-A | ** | ||||||
15302784-C-A | 13190883-C-A | ** | ||||||
18019857-C-A | 15907977-C-A | ** | ||||||
18737669-A-G | 16625789-A-G | ** | ||||||
18019870-C-G | 15907990-C-G | ** | ||||||
23061125-C-A | 20899239-C-A | ** | ||||||
22865158-G-A | 20703272-G-A | ** | ||||||
22868266-C-T | 20706380-C-T | ** | ||||||
22868275-A-G | 20706389-A-G | ** | ||||||
22868283-C-A | 20706397-C-A | ** | ||||||
22886333-C-A | 20724447-C-A | ** | ||||||
22995850-C-T | 20833964-C-T | ** | ||||||
23004935-G-T | 20843049-G-T | ** | ||||||
23052463-C-A | 20890577-C-A | ** | ||||||
23086858-T-G | 20924972-T-G | ** | ||||||
22804102-C-G | 20642216-C-G | ** | ||||||
23096733-C-T | 20934847-C-T | ** | ||||||
23128879-C-A | 20966993-C-A | ** | ||||||
23128886-C-A | 20967000-C-A | ** | ||||||
23151408-C-A | 20989522-C-A | ** | ||||||
23190348-A-T | 21028462-A-T | ** | ||||||
23253177-C-A | 21091291-C-A | ** | ||||||
23272372-T-C | 21110486-T-C | ** | ||||||
23309447-C-A | 21147561-C-A | ** | ||||||
23316130-C-A | 21154244-C-A | ** | ||||||
22815503-C-G | 20653617-C-G | ** | ||||||
22804040-C-T | 20642154-C-T | ** | ||||||
23345693-C-A | 21183807-C-A | FT124405 | ** | |||||
22527203-C-A | 20365317-C-A | ** | ||||||
22128552-C-T | 19966666-C-T | ** | ||||||
22128559-C-T | 19966673-C-T | ** | ||||||
22128585-G-A | 19966699-G-A | ** | ||||||
22132309-A-G | 19970423-A-G | ** | ||||||
22309847-A-T | 20147961-A-T | DYZ19 | ** | |||||
22484001-C-G | 20322115-C-G | DYZ19 | ** | |||||
22508726-G-C | 20346840-G-C | DYZ19 | ** | |||||
22508727-A-G | 20346841-A-G | DYZ19 | ** | |||||
22508731-G-T | 20346845-G-T | DYZ19 | ** | |||||
22529898-C-A | 20368012-C-A | ** | ||||||
22794011-C-A | 20632125-C-A | ** | ||||||
22564553-TC-T | 20402667-TC-T | ** | ||||||
22634817-G-T | 20472931-G-T | ** | ||||||
22722398-G-C | 20560512-G-C | ** | ||||||
22722481-G-T | 20560595-G-T | ** | ||||||
22722501-A-T | 20560615-A-T | ** | ||||||
22722529-G-T | 20560643-G-T | ** | ||||||
22727296-C-A | 20565410-C-A | ** | ||||||
22730015-T-A | 20568129-T-A | ** | ||||||
22732771-A-T | 20570885-A-T | ** | ||||||
23343593-C-A | 21181707-C-A | ** | ||||||
23391584-C-T | 21229698-C-T | FT144416 | ** | |||||
22113208-A-AG | 19951322-A-AG | ** | ||||||
28720009-C-A | 26573862-C-A | ** | ||||||
28614262-C-T | 26468115-C-T | ** | ||||||
28614271-A-G | 26468124-A-G | ** | ||||||
28635947-A-C | 26489800-A-C | ** | ||||||
28643444-C-A | 26497297-C-A | ** | ||||||
28650151-C-A | 26504004-C-A | ** | ||||||
28657120-G-A | 26510973-G-A | ** | ||||||
28657574-C-A | 26511427-C-A | ** | ||||||
28701744-G-A | 26555597-G-A | ** | ||||||
28711996-G-T | 26565849-G-T | ** | ||||||
28731921-T-C | 26585774-T-C | ** | ||||||
28558474-C-A | 26412327-C-A | ** | ||||||
28757870-A-G | 26611723-A-G | ** | ||||||
28759715-T-C | 26613568-T-C | ** | ||||||
28764364-C-T | 26618217-C-T | ** | ||||||
28773933-T-G | 26627786-T-G | ** | ||||||
28782165-T-C | 26636018-T-C | ** | ||||||
28798357-A-C | 26652210-A-C | ** | ||||||
56756845-A-G | ** | |||||||
56841886-C-A | ** | |||||||
56845068-T-A | ** | |||||||
28596823-C-A | 26450676-C-A | ** | ||||||
28506139-G-A | 26359992-G-A | ** | ||||||
23391587-A-C | 21229701-A-C | ** | ||||||
24879646-G-T | 22733499-G-T | g1 | ** | |||||
23493611-C-A | 21331725-C-A | ** | ||||||
23493613-C-A | 21331727-C-A | ** | ||||||
23609460-G-T | 21447574-G-T | ** | ||||||
23834777-G-A | 21672891-G-A | ** | ||||||
23857101-A-T | 21695215-A-T | ** | ||||||
24369509-A-G | 22223362-A-G | ** | ||||||
24371980-A-G | 22225833-A-G | ** | ||||||
24403188-C-A | 22257041-C-A | ** | ||||||
24492504-G-A | 22346357-G-A | ** | ||||||
25356482-G-A | 23210335-G-A | P2_r2 | ** | |||||
28483509-T-C | 26337362-T-C | ** | ||||||
25955585-C-A | 23809438-C-A | P1_Y1 | ** | |||||
26248883-T-C | 24102736-T-C | P1_Y1 | ** | |||||
26355410-C-A | 24209263-C-A | P1_Y1 | ** | |||||
26415896-G-T | 24269749-G-T | P1_Y1 | ** | |||||
27396997-G-T | 25250850-G-T | P1_g3 | ** | |||||
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10749115-T-G | ** | |||||||
11005862-G-T | ** | |||||||
10990846-T-C | ** | |||||||
10995679-T-A | ** | |||||||
10995701-C-T | ** | |||||||
10995705-C-CTCCA | ** | |||||||
10995710-A-T | ** | |||||||
10995732-TTCAATCC-T | ** | |||||||
10995743-CTGTTTGAA-C | ** | |||||||
10995800-A-AATCCT | ** | |||||||
11001979-A-G | ** | |||||||
11005168-T-G | ** | |||||||
11016341-C-A | ** | |||||||
10989374-T-C | ** | |||||||
11016342-C-CATTCA | ** | |||||||
11016357-C-CTTTCA | ** | |||||||
11016363-A-T | ** | |||||||
11023196-C-T | ** | |||||||
11024938-C-T | ** | |||||||
11037955-C-T | ** | |||||||
13214018-T-G | 11058342-T-G | ** | ||||||
13217209-C-G | 11061533-C-G | ** | ||||||
13255164-A-T | 11099488-A-T | ** | ||||||
13273936-C-A | 11118260-C-A | ** | ||||||
10990770-T-C | ** | |||||||
10985046-C-A | FT183054 | ** | ||||||
10885264-T-G | ** | |||||||
10948321-C-T | ** | |||||||
10892877-A-C | ** | |||||||
10893046-A-G | ** | |||||||
10900686-T-A | ** | |||||||
10900697-C-T | ** | |||||||
10902309-A-C | ** | |||||||
10907849-C-A | ** | |||||||
10916349-C-T | ** | |||||||
10930631-C-A | ** | |||||||
10935594-T-TCTAA | ** | |||||||
10944043-T-C | ** | |||||||
10948348-C-T | ** | |||||||
10981273-C-A | ** | |||||||
10948358-T-A | ** | |||||||
10948378-TTACAA-T | ** | |||||||
10948390-C-G | ** | |||||||
10954594-T-A | ** | |||||||
10956649-C-A | ** | |||||||
10959429-C-T | ** | |||||||
10960259-CTCCAT-C | ** | |||||||
10968600-A-C | ** | |||||||
10969155-C-A | ** | |||||||
10971299-C-A | ** | |||||||
10975862-T-A | ** | |||||||
10753289-G-C | ** | |||||||
10808832-A-T | ** | |||||||
10748886-T-A | ** | |||||||
9538063-G-T | 9700454-G-T | IR3_Prx | ** | |||||
9062212-G-T | 9224603-G-T | ** | ||||||
9169572-C-A | 9331963-C-A | ** | ||||||
9334119-T-A | 9496510-T-A | ** | ||||||
9421106-C-A | 9583497-C-A | ** | ||||||
9456065-A-T | 9618456-A-T | ** | ||||||
9465299-C-A | 9627690-C-A | ** | ||||||
9482184-A-C | 9644575-A-C | ** | ||||||
9516765-TG-T | 9679156-TG-T | ** | ||||||
9697274-T-G | 9859665-T-G | IR3_Prx | ** | |||||
8988079-CT-C | 9150470-CT-C | ** | ||||||
9765908-G-T | 9928299-G-T | ** | ||||||
9859181-A-T | 10021572-A-T | ** | ||||||
9865211-G-T | 10027602-G-T | ** | ||||||
9927431-T-C | 10089822-T-C | ** | ||||||
9928123-G-A | 10090514-G-A | ** | ||||||
9940217-C-A | 10102608-C-A | ** | ||||||
9945881-A-G | 10108272-A-G | ** | ||||||
10070438-A-G | 10232829-A-G | ** | ||||||
9015357-C-A | 9177748-C-A | ** | ||||||
8981040-C-A | 9143431-C-A | ** | ||||||
10629075-T-C | ** | |||||||
8728284-C-A | 8860243-C-A | ** | ||||||
8166686-C-T | 8298645-C-T | ** | ||||||
8217927-T-C | 8349886-T-C | ** | ||||||
8281634-C-A | 8413593-C-A | ** | ||||||
8286896-T-A | 8418855-T-A | ** | ||||||
8556333-G-A | 8688292-G-A | ** | ||||||
8671373-G-A | 8803332-G-A | ** | ||||||
8705795-C-A | 8837754-C-A | ** | ||||||
8711335-C-G | 8843294-C-G | Y132123 | ** | |||||
8851904-G-C | 8983863-G-C | ** | ||||||
8981030-T-C | 9143421-T-C | ** | ||||||
8865921-G-T | 8997880-G-T | ** | ||||||
8879596-C-A | 9011555-C-A | ** | ||||||
8914488-G-A | 9046447-G-A | ** | ||||||
8914499-A-G | 9046458-A-G | ** | ||||||
8914509-A-T | 9046468-A-T | ** | ||||||
8914848-C-G | 9046807-C-G | ** | ||||||
9117583-T-G | ** | |||||||
8970819-G-A | 9133210-G-A | ** | ||||||
10627978-T-G | ** | |||||||
56850952-A-T | ** | |||||||
10669424-C-T | ** | |||||||
10661104-A-T | ** | |||||||
10673517-C-A | ** | |||||||
10678796-A-G | ** | |||||||
10669129-G-T | ** | |||||||
10666668-T-G | ** | |||||||
10683793-C-A | ** | |||||||
10685998-C-T | ** | |||||||
10690665-C-T | ** | |||||||
10691351-C-A | ** | |||||||
10665856-C-A | ** | |||||||
10665544-C-A | ** | |||||||
10746508-C-T | ** | |||||||
10663757-AATTCCATTCC-A | ** | |||||||
10744583-C-A | ** | |||||||
10655216-T-A | ** | |||||||
10747103-C-A | ** | |||||||
10654253-C-A | ** | |||||||
10953551-C-A | *** | |||||||
8156814-C-A | 8288773-C-A | *** | ||||||
17663014-A-G | 15551134-A-G | *** | ||||||
6402493-G-A | 6534452-G-A | Z36464 | *** | |||||
17136866-C-A | 15024986-C-A | *** | ||||||
4107967-A-G | 4239926-A-G | *** | ||||||
21443266-T-C | 19281380-T-C | *** | ||||||
56828598-C-G | *** | |||||||
17018825-C-A | 14906945-C-A | *** | ||||||
7289319-C-A | 7421278-C-A | *** | ||||||
7180194-T-C | 7312153-T-C | *** | ||||||
8888419-G-T | 9020378-G-T | *** | ||||||
14289125-A-T | 12168419-A-T | *** | ||||||
8498355-G-A | 8630314-G-A | *** | ||||||
16957750-C-A | 14845870-C-A | *** | ||||||
4960692-C-A | 5092651-C-A | *** | ||||||
14300255-C-A | 12179549-C-A | *** | ||||||
7180202-T-C | 7312161-T-C | Y83524 | *** | |||||
15928776-C-A | 13816896-C-A | *** | ||||||
13575985-T-A | 11420309-T-A | *** | ||||||
7254024-G-T | 7385983-G-T | *** | ||||||
21285220-C-A | 19123334-C-A | *** | ||||||
11655537-G-A | *** | |||||||
21297990-A-G | 19136104-A-G | *** | ||||||
8649767-A-G | 8781726-A-G | *** | ||||||
21308120-C-A | 19146234-C-A | *** | ||||||
7975641-C-A | 8107600-C-A | *** | ||||||
7975634-C-A | 8107593-C-A | *** | ||||||
17716551-C-A | 15604671-C-A | *** | ||||||
17551970-G-T | 15440090-G-T | *** | ||||||
8576007-C-A | 8707966-C-A | *** | ||||||
4582206-C-A | 4714165-C-A | *** | ||||||
28621222-C-T | 26475075-C-T | *** | ||||||
14318253-C-A | 12197547-C-A | *** | ||||||
14390412-CT-C | 12269708-CT-C | 9×T | *** | |||||
18124686-G-A | 16012806-G-A | S20670 | *** | |||||
8819093-C-A | 8951052-C-A | *** | ||||||
21625153-T-C | 19463267-T-C | *** | ||||||
28479373-C-A | 26333226-C-A | *** | ||||||
7180186-C-A | 7312145-C-A | *** | ||||||
20611360-G-T | 18449474-G-T | P5_Dst | *** | |||||
8751125-C-A | 8883084-C-A | *** | ||||||
6064019-C-A | 6195978-C-A | *** | ||||||
10859343-T-C | *** | |||||||
5459396-C-A | 5591355-C-A | *** | ||||||
9807150-C-A | 9969541-C-A | *** | ||||||
9837155-C-A | 9999546-C-A | *** | ||||||
14994695-C-A | 12882780-C-A | *** | ||||||
16519066-A-G | 14407186-A-G | *** | ||||||
15057738-ATTT-A,AT | 12945830-ATTT-A,AT | 18×T | *** | |||||
16261597-C-A | 14149717-C-A | *** | ||||||
22665071-C-A | 20503185-C-A | FT70390 | *** | |||||
15143903-T-C | 13031990-T-C | *** | ||||||
17878118-C-A | 15766238-C-A | *** | ||||||
23277412-C-A | 21115526-C-A | *** | ||||||
9771964-C-A | 9934355-C-A | *** | ||||||
19529077-C-A | 17417197-C-A | Y30016 | *** | |||||
15940520-CTT-C,CT | 13828640-CTT-C,CT | 12×T | *** | |||||
15181916-A-T | 13070002-A-T | *** | ||||||
15223064-G-T | 13111150-G-T | *** | ||||||
2702464-C-A | 2834423-C-A | *** | ||||||
13940793-C-A | 11820087-C-A | A19096 | *** | |||||
22287587-A-G | 20125701-A-G | FT183055 | DYZ19 | *** | ||||
20611368-T-C | 18449482-T-C | P5_Dst | *** | |||||
16077621-A-T | 13965741-A-T | *** | ||||||
19172815-T-A | 17060935-T-A | BY126963 | *** | |||||
23803388-C-A | 21641502-C-A | *** | ||||||
9077122-C-A | 9239513-C-A | *** | ||||||
14345266-TA-T | 12224561-TA-T | 9×A | *** | |||||
22346335-A-T | 20184449-A-T | DYZ19 | *** | |||||
10801717-C-G | *** | |||||||
21939475-C-T | 19777589-C-T | *** | ||||||
16905147-C-A | 14793267-C-A | *** | ||||||
16850040-C-A | 14738160-C-A | *** | ||||||
15589531-GTCTATCTGAAA-G | 13477651-GTCTATCTGAAA-G | *** | ||||||
17591494-GA-G | 15479614-GA-G | *** | ||||||
21985308-C-A | 19823422-C-A | *** | ||||||
5204669-T-A | 5336628-T-A | *** | ||||||
4124018-G-A | 4255977-G-A | *** | ||||||
15498460-T-C | 13386580-T-C | *** | ||||||
18996582-C-A | 16884702-C-A | *** | ||||||
19004823-C-A | 16892943-C-A | *** | ||||||
14667673-C-T | 12555739-C-T | *** | ||||||
9461009-C-A | 9623400-C-A | *** | ||||||
23045760-T-A | 20883874-T-A | *** | ||||||
23011078-C-A | 20849192-C-A | *** | ||||||
15489868-G-C | 13377988-G-C | *** | ||||||
23002416-C-A | 20840530-C-A | *** | ||||||
22095824-C-A | 19933938-C-A | *** | ||||||
19060217-C-A | 16948337-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
All | McDonald | YFull | |
Kit: 125139 | 9181362 | 7490818 | 7413172 |
Used in age calculations | 9181362 | 7490818 | 7413172 |
Counts of SNPs | 19 | 21 |
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