MacRae
BigY2: 4137MDKA Birth:
ScotlandTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 4137 |
|---|---|---|---|---|---|---|---|
| hg19:Y:13695047-G-T hg38:Y:11539371-G-T | DYZ17 | A* | |||||
| hg19:Y:25861146-T-C hg38:Y:23714999-T-C | P1_Y1 | A* | |||||
| hg19:Y:25556076-C-T hg38:Y:23409929-C-T | P1_gr1 | ** | |||||
| hg19:Y:13484480-A-C hg38:Y:11328804-A-C | ** | ||||||
| hg19:Y:9146920-T-C hg38:Y:9309311-T-C | M9051 | ** | |||||
| hg19:Y:9146921-G-C hg38:Y:9309312-G-C | BY38843 | M9052 | ** | ||||
| hg19:Y:22297891-G-A hg38:Y:20136005-G-A | DYZ19 | ** | |||||
| hg19:Y:20603841-G-A hg38:Y:18441955-G-A | BY13277 | P5_Dst | 18×GA | ** | |||
| hg19:Y:58987924-T-C hg38:Y:56841777-T-C | ** | ||||||
| hg19:Y:2852900-AAAAT-A hg38:Y:2984859-AAAAT-A | 6×AAAT | ** | |||||
| hg19:Y:3451637-G-A hg38:Y:3583596-G-A | ** | ||||||
| hg19:Y:16047756-T-A hg38:Y:13935876-T-A | FT329849 | ** | |||||
| hg19:Y:21818085-TTTG-T hg38:Y:19656199-TTTG-T | 7×TTG | ** | |||||
| hg19:Y:28507901-T-C hg38:Y:26361754-T-C | PF2431 | Z21070 | ** | ||||
| hg19:Y:13809823-GGACTT-G hg38:Y:11689117-GGACTT-G | DYZ17 | ** | |||||
| hg19:Y:16271807-G-GAA hg38:Y:14159927-G-GAA | 19×A | ** | |||||
| hg19:Y:28794270-G-A hg38:Y:26648123-G-A | ** | ||||||
| hg19:Y:10032261-C-A hg38:Y:10194652-C-A | ** | ||||||
| hg19:Y:15866268-CAAAAAAAAAAAAAAAAAAAAAAAAA-C hg38:Y:13754388-CAAAAAAAAAAAAAAAAAAAAAAAAA-C | 43×A | ** | |||||
| hg19:Y:9983222-C-CA hg38:Y:10145613-C-CA | 10×A | ** | |||||
| hg19:Y:13878687-C-T hg38:Y:11757981-C-T | ** | ||||||
| hg19:Y:14777012-C-A hg38:Y:12665081-C-A | ** | ||||||
| hg38:Y:10767686-C-A | ** | ||||||
| hg19:Y:21195835-C-A hg38:Y:19033949-C-A | FT102820 | ** | |||||
| hg38:Y:11000545-G-T | ** | ||||||
| hg38:Y:10988627-C-G | ** | ||||||
| hg19:Y:9852671-C-A hg38:Y:10015062-C-A | ** | ||||||
| hg19:Y:5189402-C-A hg38:Y:5321361-C-A | ** | ||||||
| hg38:Y:10968496-A-C | ** | ||||||
| hg19:Y:14008778-G-GA hg38:Y:11888072-G-GA | 25×A | ** | |||||
| hg19:Y:18630117-C-A hg38:Y:16518237-C-A | ** | ||||||
| hg19:Y:3155486-C-A hg38:Y:3287445-C-A | ** | ||||||
| hg38:Y:10841949-C-A | ** | ||||||
| hg19:Y:13692798-A-T hg38:Y:11537122-A-T | DYZ17 | ** | |||||
| hg19:Y:17014356-C-A hg38:Y:14902476-C-A | ** | ||||||
| hg38:Y:10983782-G-C | ** | ||||||
| hg38:Y:10975738-C-A | ** | ||||||
| hg19:Y:28545723-T-A hg38:Y:26399576-T-A | ** | ||||||
| hg19:Y:28818927-G-T hg38:Y:26672780-G-T | ** | ||||||
| hg38:Y:10800110-C-A | ** | ||||||
| hg19:Y:16526702-C-A hg38:Y:14414822-C-A | ** | ||||||
| hg38:Y:10764630-C-A | ** | ||||||
| hg19:Y:16749725-G-GTT hg38:Y:14637845-G-GTT | 16×T | ** | |||||
| hg19:Y:9731618-T-TA hg38:Y:9894009-T-TA | IR3_Prx | ** | |||||
| hg38:Y:10801210-C-A | ** | ||||||
| hg38:Y:10950442-T-G | ** | ||||||
| hg38:Y:10688266-A-C | ** | ||||||
| hg19:Y:14285975-C-A hg38:Y:12165269-C-A | ** | ||||||
| hg19:Y:28758150-C-A hg38:Y:26612003-C-A | ** | ||||||
| hg19:Y:13941144-C-A hg38:Y:11820438-C-A | ** | ||||||
| hg19:Y:18242779-C-A hg38:Y:16130899-C-A | ** | ||||||
| hg38:Y:10989112-C-A | ** | ||||||
| hg38:Y:10988632-C-T | ** | ||||||
| hg19:Y:6794770-C-A hg38:Y:6926729-C-A | ** | ||||||
| hg19:Y:5814507-C-A hg38:Y:5946466-C-A | ** | ||||||
| hg19:Y:6114088-C-A hg38:Y:6246047-C-A | ** | ||||||
| hg19:Y:22297897-T-A hg38:Y:20136011-T-A | DYZ19 | ** | |||||
| hg38:Y:10888077-T-C | ** | ||||||
| hg19:Y:4873667-C-A hg38:Y:5005626-C-A | ** | ||||||
| hg19:Y:6989107-T-TAAA hg38:Y:7121066-T-TAAA | 23×A | ** | |||||
| hg19:Y:9997347-C-A hg38:Y:10159738-C-A | ** | ||||||
| hg38:Y:11028144-C-T | ** | ||||||
| hg38:Y:10803750-G-C | ** | ||||||
| hg19:Y:13453158-C-CTAATA hg38:Y:11297482-C-CTAATA | ** | ||||||
| hg19:Y:14712146-C-A hg38:Y:12600213-C-A | ** | ||||||
| hg19:Y:19216397-C-A hg38:Y:17104517-C-A | ** | ||||||
| hg38:Y:10821896-C-A | ** | ||||||
| hg38:Y:10799638-T-TCTACTCCACA | ** | ||||||
| hg38:Y:10759962-C-A | ** | ||||||
| hg19:Y:2668039-T-G hg38:Y:2799998-T-G | ** | ||||||
| hg19:Y:2668083-C-A hg38:Y:2800042-C-A | ** | ||||||
| hg19:Y:2695812-C-A hg38:Y:2827771-C-A | ** | ||||||
| hg19:Y:2697385-A-C hg38:Y:2829344-A-C | ** | ||||||
| hg19:Y:2699733-G-A hg38:Y:2831692-G-A | ** | ||||||
| hg19:Y:2708459-TAACC-T hg38:Y:2840418-TAACC-T | ** | ||||||
| hg19:Y:2708485-T-A hg38:Y:2840444-T-A | ** | ||||||
| hg19:Y:2788271-C-A hg38:Y:2920230-C-A | ** | ||||||
| hg19:Y:3121823-C-A hg38:Y:3253782-C-A | ** | ||||||
| hg19:Y:3164823-G-T hg38:Y:3296782-G-T | ** | ||||||
| hg19:Y:3178224-C-A hg38:Y:3310183-C-A | ** | ||||||
| hg19:Y:3221795-G-T hg38:Y:3353754-G-T | ** | ||||||
| hg19:Y:3435964-C-A hg38:Y:3567923-C-A | ** | ||||||
| hg19:Y:3602709-C-A hg38:Y:3734668-C-A | ** | ||||||
| hg19:Y:3621798-C-A hg38:Y:3753757-C-A | ** | ||||||
| hg19:Y:3746509-C-A hg38:Y:3878468-C-A | ** | ||||||
| hg19:Y:3746519-C-A hg38:Y:3878478-C-A | ** | ||||||
| hg19:Y:3866026-C-A hg38:Y:3997985-C-A | ** | ||||||
| hg19:Y:3987680-C-A hg38:Y:4119639-C-A | ** | ||||||
| hg19:Y:4040849-G-T hg38:Y:4172808-G-T | ** | ||||||
| hg19:Y:4070036-C-A hg38:Y:4201995-C-A | ** | ||||||
| hg19:Y:4244683-C-A hg38:Y:4376642-C-A | ** | ||||||
| hg19:Y:4256991-A-AT hg38:Y:4388950-A-AT | ** | ||||||
| hg19:Y:4293611-C-G hg38:Y:4425570-C-G | ** | ||||||
| hg19:Y:4293624-G-T hg38:Y:4425583-G-T | ** | ||||||
| hg19:Y:4351550-A-C hg38:Y:4483509-A-C | ** | ||||||
| hg19:Y:4919621-G-T hg38:Y:5051580-G-T | ** | ||||||
| hg19:Y:4959321-G-T hg38:Y:5091280-G-T | ** | ||||||
| hg19:Y:4972720-G-T hg38:Y:5104679-G-T | ** | ||||||
| hg19:Y:5148938-G-T hg38:Y:5280897-G-T | ** | ||||||
| hg19:Y:5148996-G-T hg38:Y:5280955-G-T | ** | ||||||
| hg19:Y:5170251-G-A hg38:Y:5302210-G-A | ** | ||||||
| hg19:Y:5213193-G-T hg38:Y:5345152-G-T | ** | ||||||
| hg19:Y:5266997-C-A hg38:Y:5398956-C-A | ** | ||||||
| hg19:Y:5292789-C-A hg38:Y:5424748-C-A | ** | ||||||
| hg19:Y:5313571-C-A hg38:Y:5445530-C-A | ** | ||||||
| hg19:Y:5443426-T-G hg38:Y:5575385-T-G | ** | ||||||
| hg19:Y:5547882-C-A hg38:Y:5679841-C-A | ** | ||||||
| hg19:Y:5603768-C-A hg38:Y:5735727-C-A | ** | ||||||
| hg19:Y:5690956-C-A hg38:Y:5822915-C-A | ** | ||||||
| hg19:Y:5770439-A-T hg38:Y:5902398-A-T | ** | ||||||
| hg19:Y:5814508-TG-T hg38:Y:5946467-TG-T | ** | ||||||
| hg19:Y:5814518-C-A hg38:Y:5946477-C-A | ** | ||||||
| hg19:Y:5861239-C-A hg38:Y:5993198-C-A | ** | ||||||
| hg19:Y:5969709-C-A hg38:Y:6101668-C-A | ** | ||||||
| hg19:Y:6085401-A-T hg38:Y:6217360-A-T | FGC1698 | FGC1698 Y5585 | ** | ||||
| hg19:Y:6367730-C-A hg38:Y:6499689-C-A | ** | ||||||
| hg19:Y:6407730-C-A hg38:Y:6539689-C-A | ** | ||||||
| hg19:Y:6770873-C-A hg38:Y:6902832-C-A | ** | ||||||
| hg19:Y:6775456-C-A hg38:Y:6907415-C-A | ** | ||||||
| hg19:Y:7091303-C-A hg38:Y:7223262-C-A | ** | ||||||
| hg19:Y:7133951-T-C hg38:Y:7265910-T-C | ** | ||||||
| hg19:Y:7157100-G-A hg38:Y:7289059-G-A | ** | ||||||
| hg19:Y:7186203-C-A hg38:Y:7318162-C-A | ** | ||||||
| hg19:Y:7234437-C-A hg38:Y:7366396-C-A | ** | ||||||
| hg19:Y:7234496-C-A hg38:Y:7366455-C-A | ** | ||||||
| hg19:Y:7572845-T-A hg38:Y:7704804-T-A | ** | ||||||
| hg19:Y:7699070-G-T hg38:Y:7831029-G-T | ** | ||||||
| hg19:Y:7709021-G-A hg38:Y:7840980-G-A | ** | ||||||
| hg19:Y:7773158-C-A hg38:Y:7905117-C-A | ** | ||||||
| hg19:Y:7783305-A-G hg38:Y:7915264-A-G | ** | ||||||
| hg19:Y:7868078-T-AG hg38:Y:8000037-T-AG | ** | ||||||
| hg19:Y:7897199-T-C hg38:Y:8029158-T-C | ** | ||||||
| hg19:Y:7996877-C-A hg38:Y:8128836-C-A | ** | ||||||
| hg19:Y:8173691-G-T hg38:Y:8305650-G-T | ** | ||||||
| hg19:Y:8177604-T-C hg38:Y:8309563-T-C | ** | ||||||
| hg19:Y:8283915-C-A hg38:Y:8415874-C-A | ** | ||||||
| hg19:Y:8342920-C-A hg38:Y:8474879-C-A | ** | ||||||
| hg19:Y:8749096-G-T hg38:Y:8881055-G-T | ** | ||||||
| hg19:Y:8749123-C-A hg38:Y:8881082-C-A | ** | ||||||
| hg19:Y:9040264-C-A hg38:Y:9202655-C-A | ** | ||||||
| hg19:Y:9519761-C-A hg38:Y:9682152-C-A | ** | ||||||
| hg19:Y:9557062-A-AT hg38:Y:9719453-A-AT | IR3_Prx | ** | |||||
| hg19:Y:9761056-T-C hg38:Y:9923447-T-C | ** | ||||||
| hg19:Y:9798100-G-T hg38:Y:9960491-G-T | ** | ||||||
| hg19:Y:9929388-C-A hg38:Y:10091779-C-A | ** | ||||||
| hg19:Y:10023486-G-A hg38:Y:10185877-G-A | ** | ||||||
| hg38:Y:10654526-C-A | ** | ||||||
| hg38:Y:10654536-C-G | ** | ||||||
| hg38:Y:10654540-A-G | ** | ||||||
| hg38:Y:10654559-CTCTCT-C | ** | ||||||
| hg38:Y:10657192-C-A | ** | ||||||
| hg38:Y:10658512-T-A | ** | ||||||
| hg38:Y:10658554-A-AT | ** | ||||||
| hg38:Y:10669374-C-A | ** | ||||||
| hg38:Y:10673888-C-T | ** | ||||||
| hg38:Y:10673909-A-AC | ** | ||||||
| hg38:Y:10673910-T-TAGAC | ** | ||||||
| hg38:Y:10678894-A-T | ** | ||||||
| hg38:Y:10746903-CATTCA-C | ** | ||||||
| hg38:Y:10750487-G-T | ** | ||||||
| hg38:Y:10759953-T-G | ** | ||||||
| hg38:Y:10794224-C-A | ** | ||||||
| hg38:Y:10796102-C-A | ** | ||||||
| hg38:Y:10799348-C-A | ** | ||||||
| hg38:Y:10799387-C-A | ** | ||||||
| hg38:Y:10800336-A-T | ** | ||||||
| hg38:Y:10802463-C-A | ** | ||||||
| hg38:Y:10818743-T-C | ** | ||||||
| hg38:Y:10821860-T-TCCATA | ** | ||||||
| hg38:Y:10821874-C-G | ** | ||||||
| hg38:Y:10821891-C-CCTTTT | ** | ||||||
| hg38:Y:10838035-C-T | ** | ||||||
| hg38:Y:10839624-A-T | ** | ||||||
| hg38:Y:10839919-C-A | ** | ||||||
| hg38:Y:10849752-C-A | ** | ||||||
| hg38:Y:10858152-C-A | ** | ||||||
| hg38:Y:10859554-C-A | ** | ||||||
| hg38:Y:10860009-T-TA | ** | ||||||
| hg38:Y:10860012-A-C | ** | ||||||
| hg38:Y:10860013-AT-A | ** | ||||||
| hg38:Y:10867999-C-G | ** | ||||||
| hg38:Y:10868003-T-A | ** | ||||||
| hg38:Y:10868011-A-G | ** | ||||||
| hg38:Y:10868022-A-G | ** | ||||||
| hg38:Y:10889899-GCATTC-G | ** | ||||||
| hg38:Y:10896158-A-C | ** | ||||||
| hg38:Y:10899040-C-A | ** | ||||||
| hg38:Y:10899071-A-T | ** | ||||||
| hg38:Y:10899095-C-T | ** | ||||||
| hg38:Y:10902607-G-C | ** | ||||||
| hg38:Y:10902614-G-T | ** | ||||||
| hg38:Y:10902631-C-A | ** | ||||||
| hg38:Y:10902688-T-A | ** | ||||||
| hg38:Y:10902732-T-A | ** | ||||||
| hg38:Y:10923779-C-A | ** | ||||||
| hg38:Y:10923841-C-G | ** | ||||||
| hg38:Y:10924380-T-C | ** | ||||||
| hg38:Y:10928311-T-G | ** | ||||||
| hg38:Y:10939527-C-T | ** | ||||||
| hg38:Y:10950435-T-G | ** | ||||||
| hg38:Y:10951464-C-A | ** | ||||||
| hg38:Y:10955292-A-T | ** | ||||||
| hg38:Y:10955301-C-A | ** | ||||||
| hg38:Y:10955312-A-T | ** | ||||||
| hg38:Y:10958233-C-T | ** | ||||||
| hg38:Y:10959438-G-C | ** | ||||||
| hg38:Y:10959535-A-T | ** | ||||||
| hg38:Y:10959586-A-T | ** | ||||||
| hg38:Y:10964797-C-A | ** | ||||||
| hg38:Y:10968491-G-C | ** | ||||||
| hg38:Y:10974876-C-A | ** | ||||||
| hg38:Y:10976839-T-C | ** | ||||||
| hg38:Y:10976882-T-C | ** | ||||||
| hg38:Y:10976893-T-A | ** | ||||||
| hg38:Y:10976897-C-G | ** | ||||||
| hg38:Y:10976898-A-C | ** | ||||||
| hg38:Y:10976909-A-T | FT438869 | ** | |||||
| hg38:Y:10984781-C-A | ** | ||||||
| hg38:Y:10985958-C-A | ** | ||||||
| hg38:Y:10994297-A-G | ** | ||||||
| hg38:Y:10997117-T-A | ** | ||||||
| hg38:Y:11006140-C-A | ** | ||||||
| hg38:Y:11008234-C-A | ** | ||||||
| hg38:Y:11010088-C-A | ** | ||||||
| hg38:Y:11015378-G-T | ** | ||||||
| hg38:Y:11016484-T-G | ** | ||||||
| hg38:Y:11025280-T-G | ** | ||||||
| hg38:Y:11025326-C-A | ** | ||||||
| hg38:Y:11025549-C-A | ** | ||||||
| hg38:Y:11027298-C-G | ** | ||||||
| hg38:Y:11027327-A-G | ** | ||||||
| hg38:Y:11028141-A-C | ** | ||||||
| hg38:Y:11033716-C-A | ** | ||||||
| hg19:Y:13227295-T-A hg38:Y:11071619-T-A | ** | ||||||
| hg19:Y:13227297-G-T hg38:Y:11071621-G-T | ** | ||||||
| hg19:Y:13227307-C-G hg38:Y:11071631-C-G | ** | ||||||
| hg19:Y:13227319-T-A hg38:Y:11071643-T-A | ** | ||||||
| hg19:Y:13393113-C-A hg38:Y:11237437-C-A | ** | ||||||
| hg19:Y:13394796-T-A hg38:Y:11239120-T-A | ** | ||||||
| hg19:Y:13453127-T-G hg38:Y:11297451-T-G | ** | ||||||
| hg19:Y:13453144-C-CACTCGGGATG hg38:Y:11297468-C-CACTCGGGATG | ** | ||||||
| hg19:Y:13453369-C-A hg38:Y:11297693-C-A | ** | ||||||
| hg19:Y:13461288-G-C hg38:Y:11305612-G-C | ** | ||||||
| hg19:Y:13461312-C-A hg38:Y:11305636-C-A | ** | ||||||
| hg19:Y:13461313-A-G hg38:Y:11305637-A-G | ** | ||||||
| hg19:Y:13475483-C-A hg38:Y:11319807-C-A | ** | ||||||
| hg19:Y:13486602-C-A hg38:Y:11330926-C-A | ** | ||||||
| hg19:Y:13603006-T-G hg38:Y:11447330-T-G | ** | ||||||
| hg19:Y:13710154-G-T hg38:Y:11554478-G-T | DYZ17 | ** | |||||
| hg38:Y:11643667-T-G | DYZ17 | ** | |||||
| hg38:Y:11659131-C-A | DYZ17 | ** | |||||
| hg38:Y:11670247-C-A | DYZ17 | ** | |||||
| hg38:Y:11672741-C-A | DYZ17 | ** | |||||
| hg19:Y:13809816-ACAGAT-A hg38:Y:11689110-ACAGAT-A | DYZ17 | ** | |||||
| hg19:Y:13809858-G-A hg38:Y:11689152-G-A | DYZ17 | ** | |||||
| hg19:Y:13854838-G-T hg38:Y:11734132-G-T | DYZ17 | ** | |||||
| hg19:Y:13859425-G-A hg38:Y:11738719-G-A | DYZ17 | ** | |||||
| hg19:Y:13871380-C-A hg38:Y:11750674-C-A | ** | ||||||
| hg19:Y:13928104-C-A hg38:Y:11807398-C-A | ** | ||||||
| hg19:Y:13929346-A-T hg38:Y:11808640-A-T | ** | ||||||
| hg19:Y:13966041-C-T hg38:Y:11845335-C-T | ** | ||||||
| hg19:Y:14000440-C-A hg38:Y:11879734-C-A | ** | ||||||
| hg19:Y:14048835-T-G hg38:Y:11928129-T-G | ** | ||||||
| hg19:Y:14061359-C-G hg38:Y:11940653-C-G | ** | ||||||
| hg19:Y:14076078-C-A hg38:Y:11955372-C-A | ** | ||||||
| hg19:Y:14089903-C-A hg38:Y:11969197-C-A | ** | ||||||
| hg19:Y:14295310-C-A hg38:Y:12174604-C-A | ** | ||||||
| hg19:Y:14354662-C-A hg38:Y:12233957-C-A | ** | ||||||
| hg19:Y:14356193-C-A hg38:Y:12235488-C-A | ** | ||||||
| hg19:Y:14366508-C-T hg38:Y:12245803-C-T | ** | ||||||
| hg19:Y:14465473-C-A hg38:Y:12344746-C-A | ** | ||||||
| hg19:Y:14501076-C-A hg38:Y:12389281-C-A | ** | ||||||
| hg19:Y:14511419-C-A hg38:Y:12399624-C-A | ** | ||||||
| hg19:Y:14611504-C-A hg38:Y:12499710-C-A | ** | ||||||
| hg19:Y:14611699-C-G hg38:Y:12499905-C-G | ** | ||||||
| hg19:Y:14715145-C-A hg38:Y:12603212-C-A | ** | ||||||
| hg19:Y:14826548-GTTTTT-G hg38:Y:12714615-GTTTTT-G | 19×T | ** | |||||
| hg19:Y:14943558-T-C hg38:Y:12831632-T-C | ** | ||||||
| hg19:Y:14943559-C-T hg38:Y:12831633-C-T | ** | ||||||
| hg19:Y:14943565-T-C hg38:Y:12831639-T-C | ** | ||||||
| hg19:Y:14943568-A-G hg38:Y:12831642-A-G | ** | ||||||
| hg19:Y:14965421-G-T hg38:Y:12853496-G-T | ** | ||||||
| hg19:Y:15038373-C-A hg38:Y:12926463-C-A | ** | ||||||
| hg19:Y:15093883-C-A hg38:Y:12981971-C-A | ** | ||||||
| hg19:Y:15190203-G-A hg38:Y:13078289-G-A | ** | ||||||
| hg19:Y:15192835-C-A hg38:Y:13080921-C-A | ** | ||||||
| hg19:Y:15218561-C-A hg38:Y:13106647-C-A | ** | ||||||
| hg19:Y:15286157-G-T hg38:Y:13174256-G-T | ** | ||||||
| hg19:Y:15288063-G-T hg38:Y:13176162-G-T | ** | ||||||
| hg19:Y:15320600-G-T hg38:Y:13208706-G-T | Y40927 | ** | |||||
| hg19:Y:15353945-CAAAACA-C hg38:Y:13242064-CAAAACA-C | 4×AAAACA | ** | |||||
| hg19:Y:15480262-T-C hg38:Y:13368382-T-C | ** | ||||||
| hg19:Y:15486066-T-A hg38:Y:13374186-T-A | ** | ||||||
| hg19:Y:15515287-C-A hg38:Y:13403407-C-A | ** | ||||||
| hg19:Y:15655666-G-T hg38:Y:13543786-G-T | ** | ||||||
| hg19:Y:15780049-C-A hg38:Y:13668169-C-A | ** | ||||||
| hg19:Y:15942955-C-A hg38:Y:13831075-C-A | ** | ||||||
| hg19:Y:15987412-G-A hg38:Y:13875532-G-A | ** | ||||||
| hg19:Y:15987434-G-T hg38:Y:13875554-G-T | ** | ||||||
| hg19:Y:16018937-C-A hg38:Y:13907057-C-A | ** | ||||||
| hg19:Y:16047138-C-A hg38:Y:13935258-C-A | ** | ||||||
| hg19:Y:16047879-T-A hg38:Y:13935999-T-A | ** | ||||||
| hg19:Y:16278571-C-A hg38:Y:14166691-C-A | ** | ||||||
| hg19:Y:16319599-G-C hg38:Y:14207719-G-C | ** | ||||||
| hg19:Y:16421801-C-A hg38:Y:14309921-C-A | ** | ||||||
| hg19:Y:16424286-C-A hg38:Y:14312406-C-A | ** | ||||||
| hg19:Y:16494319-T-C hg38:Y:14382439-T-C | ** | ||||||
| hg19:Y:16571781-G-T hg38:Y:14459901-G-T | ** | ||||||
| hg19:Y:16656658-C-CTTT hg38:Y:14544778-C-CTTT | 14×T | ** | |||||
| hg19:Y:16678648-C-A hg38:Y:14566768-C-A | ** | ||||||
| hg19:Y:16706864-C-A hg38:Y:14594984-C-A | ** | ||||||
| hg19:Y:16905896-G-A hg38:Y:14794016-G-A | ** | ||||||
| hg19:Y:16986926-C-G hg38:Y:14875046-C-G | ** | ||||||
| hg19:Y:17096915-C-A hg38:Y:14985035-C-A | ** | ||||||
| hg19:Y:17098989-C-A hg38:Y:14987109-C-A | ** | ||||||
| hg19:Y:17185131-C-A hg38:Y:15073251-C-A | ** | ||||||
| hg19:Y:17210879-A-C hg38:Y:15098999-A-C | ** | ||||||
| hg19:Y:17239182-A-G hg38:Y:15127302-A-G | ** | ||||||
| hg19:Y:17283133-C-A hg38:Y:15171253-C-A | ** | ||||||
| hg19:Y:17326692-C-A hg38:Y:15214812-C-A | ** | ||||||
| hg19:Y:17353721-C-A hg38:Y:15241841-C-A | ** | ||||||
| hg19:Y:17355669-C-A hg38:Y:15243789-C-A | ** | ||||||
| hg19:Y:17375535-C-A hg38:Y:15263655-C-A | ** | ||||||
| hg19:Y:17376550-A-T hg38:Y:15264670-A-T | ** | ||||||
| hg19:Y:17478918-C-A hg38:Y:15367038-C-A | ** | ||||||
| hg19:Y:17591773-A-T hg38:Y:15479893-A-T | ** | ||||||
| hg19:Y:17637082-C-A hg38:Y:15525202-C-A | ** | ||||||
| hg19:Y:17896324-A-G hg38:Y:15784444-A-G | ** | ||||||
| hg19:Y:17918659-G-T hg38:Y:15806779-G-T | ** | ||||||
| hg19:Y:17983517-C-A hg38:Y:15871637-C-A | ** | ||||||
| hg19:Y:17997466-G-C hg38:Y:15885586-G-C | P7_Gap | ** | |||||
| hg19:Y:18059853-T-A hg38:Y:15947973-T-A | ** | ||||||
| hg19:Y:18067223-T-G hg38:Y:15955343-T-G | ** | ||||||
| hg19:Y:18144717-A-T hg38:Y:16032837-A-T | ** | ||||||
| hg19:Y:18174811-G-T hg38:Y:16062931-G-T | ** | ||||||
| hg19:Y:18192119-G-T hg38:Y:16080239-G-T | ** | ||||||
| hg19:Y:18195820-C-A hg38:Y:16083940-C-A | ** | ||||||
| hg19:Y:18292840-C-A hg38:Y:16180960-C-A | P6_Prx | ** | |||||
| hg19:Y:18365665-G-T hg38:Y:16253785-G-T | P6_Prx | ** | |||||
| hg19:Y:18567767-C-A hg38:Y:16455887-C-A | ** | ||||||
| hg19:Y:18604464-C-A hg38:Y:16492584-C-A | ** | ||||||
| hg19:Y:18670226-C-T hg38:Y:16558346-C-T | FT111859 | ** | |||||
| hg19:Y:18682863-T-C hg38:Y:16570983-T-C | ** | ||||||
| hg19:Y:18768617-A-G hg38:Y:16656737-A-G | ** | ||||||
| hg19:Y:18826609-C-A hg38:Y:16714729-C-A | ** | ||||||
| hg19:Y:18880123-C-A hg38:Y:16768243-C-A | ** | ||||||
| hg19:Y:18948085-A-G hg38:Y:16836205-A-G | ** | ||||||
| hg19:Y:18965106-C-A hg38:Y:16853226-C-A | ** | ||||||
| hg19:Y:19020023-A-C hg38:Y:16908143-A-C | ** | ||||||
| hg19:Y:19020029-T-G hg38:Y:16908149-T-G | ** | ||||||
| hg19:Y:19122169-C-T hg38:Y:17010289-C-T | ** | ||||||
| hg19:Y:19202782-A-C hg38:Y:17090902-A-C | ** | ||||||
| hg19:Y:19302416-T-A hg38:Y:17190536-T-A | ** | ||||||
| hg19:Y:19429693-GC-G hg38:Y:17317813-GC-G | ** | ||||||
| hg19:Y:19517252-G-T hg38:Y:17405372-G-T | ** | ||||||
| hg19:Y:19545992-C-A hg38:Y:17434112-C-A | ** | ||||||
| hg19:Y:19551664-C-A hg38:Y:17439784-C-A | ** | ||||||
| hg19:Y:19677212-C-T hg38:Y:17565332-C-T | P5_Prx | ** | |||||
| hg19:Y:19936170-C-A hg38:Y:17824290-C-A | P5_Prx | ** | |||||
| hg19:Y:20216000-T-A hg38:Y:18054114-T-A | P5_Dst | ** | |||||
| hg19:Y:20675799-G-C hg38:Y:18513913-G-C | P4_Prx | ** | |||||
| hg19:Y:20675821-C-G hg38:Y:18513935-C-G | P4_Prx | ** | |||||
| hg19:Y:20711368-T-A hg38:Y:18549482-T-A | P4_Prx | ** | |||||
| hg19:Y:20711386-A-C hg38:Y:18549500-A-C | P4_Prx | ** | |||||
| hg19:Y:20711395-G-T hg38:Y:18549509-G-T | P4_Prx | ** | |||||
| hg19:Y:20711398-T-A hg38:Y:18549512-T-A | P4_Prx | ** | |||||
| hg19:Y:20711419-T-A hg38:Y:18549533-T-A | P4_Prx | ** | |||||
| hg19:Y:20841005-T-A hg38:Y:18679119-T-A | P4_Gap | ** | |||||
| hg19:Y:21071095-C-A hg38:Y:18909209-C-A | ** | ||||||
| hg19:Y:21090910-G-C hg38:Y:18929024-G-C | ** | ||||||
| hg19:Y:21090933-G-T hg38:Y:18929047-G-T | ** | ||||||
| hg19:Y:21162828-C-A hg38:Y:19000942-C-A | ** | ||||||
| hg19:Y:21177453-C-A hg38:Y:19015567-C-A | ** | ||||||
| hg19:Y:21306590-CAA-C hg38:Y:19144704-CAA-C | 27×A | ** | |||||
| hg19:Y:21316936-T-C hg38:Y:19155050-T-C | ** | ||||||
| hg19:Y:21317634-C-A hg38:Y:19155748-C-A | ** | ||||||
| hg19:Y:21386287-C-A hg38:Y:19224401-C-A | ** | ||||||
| hg19:Y:21386344-C-A hg38:Y:19224458-C-A | ** | ||||||
| hg19:Y:21427785-C-A hg38:Y:19265899-C-A | FT93379 | ** | |||||
| hg19:Y:21443464-T-A hg38:Y:19281578-T-A | ** | ||||||
| hg19:Y:21443470-G-T hg38:Y:19281584-G-T | ** | ||||||
| hg19:Y:21443520-A-T hg38:Y:19281634-A-T | ** | ||||||
| hg19:Y:21455893-C-A hg38:Y:19294007-C-A | ** | ||||||
| hg19:Y:21515889-AAGAAGC-A hg38:Y:19354003-AAGAAGC-A | ** | ||||||
| hg19:Y:21550069-C-A hg38:Y:19388183-C-A | ** | ||||||
| hg19:Y:21796641-G-T hg38:Y:19634755-G-T | ** | ||||||
| hg19:Y:21863855-G-T hg38:Y:19701969-G-T | ** | ||||||
| hg19:Y:21895583-C-A hg38:Y:19733697-C-A | ** | ||||||
| hg19:Y:21974727-T-G hg38:Y:19812841-T-G | ** | ||||||
| hg19:Y:22088914-A-T hg38:Y:19927028-A-T | ** | ||||||
| hg19:Y:22455008-T-C hg38:Y:20293122-T-C | DYZ19 | ** | |||||
| hg19:Y:22527221-C-A hg38:Y:20365335-C-A | ** | ||||||
| hg19:Y:22629796-C-A hg38:Y:20467910-C-A | ** | ||||||
| hg19:Y:22649309-C-A hg38:Y:20487423-C-A | ** | ||||||
| hg19:Y:22729425-C-A hg38:Y:20567539-C-A | ** | ||||||
| hg19:Y:22824819-C-A hg38:Y:20662933-C-A | ** | ||||||
| hg19:Y:22837982-T-A hg38:Y:20676096-T-A | ** | ||||||
| hg19:Y:22935420-C-A hg38:Y:20773534-C-A | ** | ||||||
| hg19:Y:22950716-C-A hg38:Y:20788830-C-A | ** | ||||||
| hg19:Y:22951184-T-A hg38:Y:20789298-T-A | ** | ||||||
| hg19:Y:22951200-T-C hg38:Y:20789314-T-C | ** | ||||||
| hg19:Y:23005399-C-A hg38:Y:20843513-C-A | ** | ||||||
| hg19:Y:23127094-C-A hg38:Y:20965208-C-A | ** | ||||||
| hg19:Y:23425291-C-A hg38:Y:21263405-C-A | ** | ||||||
| hg19:Y:23609222-ATTTT-A hg38:Y:21447336-ATTTT-A | 14×T | ** | |||||
| hg19:Y:23786296-T-G hg38:Y:21624410-T-G | ** | ||||||
| hg19:Y:23792339-C-A hg38:Y:21630453-C-A | ** | ||||||
| hg19:Y:24170252-C-G hg38:Y:22024105-C-G | P3_b1 | ** | |||||
| hg19:Y:24242207-G-T hg38:Y:22096060-G-T | P3_b1 | ** | |||||
| hg19:Y:24421872-T-A hg38:Y:22275725-T-A | ** | ||||||
| hg19:Y:25720195-G-T hg38:Y:23574048-G-T | P1_b3 | ** | |||||
| hg19:Y:25880471-GT-G hg38:Y:23734324-GT-G | P1_Y1 | ** | |||||
| hg19:Y:26084949-C-A hg38:Y:23938802-C-A | P1_Y1 | ** | |||||
| hg19:Y:26355431-T-G hg38:Y:24209284-T-G | P1_Y1 | ** | |||||
| hg19:Y:26671586-C-A hg38:Y:24525439-C-A | P1_g2 | ** | |||||
| hg19:Y:27466779-C-A hg38:Y:25320632-C-A | P1_Y2 | ** | |||||
| hg19:Y:27523292-C-A hg38:Y:25377145-C-A | P1_Y2 | ** | |||||
| hg19:Y:28500799-A-T hg38:Y:26354652-A-T | ** | ||||||
| hg19:Y:28507902-G-A hg38:Y:26361755-G-A | ** | ||||||
| hg19:Y:28545793-C-A hg38:Y:26399646-C-A | ** | ||||||
| hg19:Y:28660506-C-A hg38:Y:26514359-C-A | ** | ||||||
| hg19:Y:28661066-C-A hg38:Y:26514919-C-A | ** | ||||||
| hg19:Y:28688945-C-A hg38:Y:26542798-C-A | ** | ||||||
| hg19:Y:28706718-C-G hg38:Y:26560571-C-G | ** | ||||||
| hg19:Y:28767795-C-A hg38:Y:26621648-C-A | ** | ||||||
| hg38:Y:56825694-G-T | ** | ||||||
| hg38:Y:56841754-A-C | ** | ||||||
| hg38:Y:56841770-A-G | ** | ||||||
| hg38:Y:56841773-G-A | ** | ||||||
| hg38:Y:56841787-G-T | ** | ||||||
| hg38:Y:56841790-C-T | ** | ||||||
| hg38:Y:56841797-T-G | ** | ||||||
| hg38:Y:56843285-A-C | ** | ||||||
| hg38:Y:56858002-G-T | ** | ||||||
| hg19:Y:16301002-GAAAA-G hg38:Y:14189122-GAAAA-G | 18×A | *** | |||||
| hg19:Y:28631764-C-A hg38:Y:26485617-C-A | *** | ||||||
| hg19:Y:9959863-TTAA-T hg38:Y:10122254-TTAA-T | 7×TAA | *** | |||||
| hg38:Y:10986907-T-A,C | *** | ||||||
| hg19:Y:13488816-G-A hg38:Y:11333140-G-A | *** | ||||||
| hg19:Y:18596252-C-A hg38:Y:16484372-C-A | *** | ||||||
| hg19:Y:7165183-AT-A hg38:Y:7297142-AT-A | 8×T | *** | |||||
| hg19:Y:13513142-CA-C hg38:Y:11357466-CA-C | *** | ||||||
| hg19:Y:19391099-CTTTT-C hg38:Y:17279219-CTTTT-C | 17×T | *** | |||||
| hg38:Y:11017693-T-A | *** | ||||||
| hg19:Y:13447224-C-A hg38:Y:11291548-C-A | *** | ||||||
| hg38:Y:11014466-C-T | *** | ||||||
| hg19:Y:13821302-C-A hg38:Y:11700596-C-A | DYZ17 | *** | |||||
| hg19:Y:6768885-CTT-C,CTTT hg38:Y:6900844-CTT-C,CTTT | 17×T | *** | |||||
| hg19:Y:13992191-C-CAA hg38:Y:11871485-C-CAA | 22×A | *** | |||||
| hg19:Y:5782360-C-A hg38:Y:5914319-C-A | *** | ||||||
| hg19:Y:6146478-G-C hg38:Y:6278437-G-C | IR3_Dst | *** | |||||
| hg19:Y:6807750-G-A hg38:Y:6939709-G-A | *** | ||||||
| hg19:Y:6961458-C-A hg38:Y:7093417-C-A | *** | ||||||
| hg19:Y:7038725-C-A hg38:Y:7170684-C-A | *** | ||||||
| hg19:Y:7142507-C-A hg38:Y:7274466-C-A | *** | ||||||
| hg19:Y:7342053-C-T hg38:Y:7474012-C-T | *** | ||||||
| hg19:Y:8182205-CAAA-C,CAAAA hg38:Y:8314164-CAAA-C,CAAAA | 18×A | *** | |||||
| hg19:Y:8775842-C-A hg38:Y:8907801-C-A | *** | ||||||
| hg19:Y:8820108-C-A hg38:Y:8952067-C-A | *** | ||||||
| hg19:Y:8974873-G-T hg38:Y:9137264-G-T | *** | ||||||
| hg19:Y:9090754-C-A hg38:Y:9253145-C-A | *** | ||||||
| hg19:Y:9427761-G-T hg38:Y:9590152-G-T | *** | ||||||
| hg19:Y:9843184-C-CAA hg38:Y:10005575-C-CAA | 15×A | *** | |||||
| hg38:Y:10755331-C-A | *** | ||||||
| hg38:Y:10788994-C-A | *** | ||||||
| hg38:Y:10889866-G-T | *** | ||||||
| hg19:Y:13194033-C-A hg38:Y:11038357-C-A | *** | ||||||
| hg19:Y:13253926-C-A hg38:Y:11098250-C-A | *** | ||||||
| hg19:Y:13319580-C-A hg38:Y:11163904-C-A | *** | ||||||
| hg19:Y:13465408-C-A hg38:Y:11309732-C-A | *** | ||||||
| hg19:Y:13488837-G-C hg38:Y:11333161-G-C | *** | ||||||
| hg19:Y:13488844-G-C,GGC hg38:Y:11333168-G-C,GGC | *** | ||||||
| hg19:Y:13488853-G-T hg38:Y:11333177-G-T | *** | ||||||
| hg19:Y:13488865-G-C hg38:Y:11333189-G-C | *** | ||||||
| hg19:Y:13488904-G-C hg38:Y:11333228-G-C | *** | ||||||
| hg19:Y:13643765-C-A hg38:Y:11488089-C-A | *** | ||||||
| hg19:Y:13659517-C-A hg38:Y:11503841-C-A | DYZ17 | *** | |||||
| hg19:Y:13865856-A-G hg38:Y:11745150-A-G | FT101520 | DYZ17 | *** | ||||
| hg19:Y:13939314-C-A hg38:Y:11818608-C-A | *** | ||||||
| hg19:Y:14021257-G-T hg38:Y:11900551-G-T | *** | ||||||
| hg19:Y:14219156-C-A hg38:Y:12098450-C-A | *** | ||||||
| hg19:Y:14232713-C-A hg38:Y:12112007-C-A | *** | ||||||
| hg19:Y:15001598-C-A hg38:Y:12889683-C-A | *** | ||||||
| hg19:Y:15158224-C-A hg38:Y:13046310-C-A | *** | ||||||
| hg19:Y:15249995-C-A hg38:Y:13138081-C-A | *** | ||||||
| hg19:Y:15358759-A-G hg38:Y:13246878-A-G | *** | ||||||
| hg19:Y:15588715-C-CAAA hg38:Y:13476835-C-CAAA | 14×A | *** | |||||
| hg19:Y:16057096-C-A hg38:Y:13945216-C-A | *** | ||||||
| hg19:Y:16333088-A-G hg38:Y:14221208-A-G | *** | ||||||
| hg19:Y:16682459-ATTAT-A hg38:Y:14570579-ATTAT-A | 6×TTAT | *** | |||||
| hg19:Y:17110248-C-A hg38:Y:14998368-C-A | *** | ||||||
| hg19:Y:17141894-C-A hg38:Y:15030014-C-A | *** | ||||||
| hg19:Y:17278129-G-T hg38:Y:15166249-G-T | *** | ||||||
| hg19:Y:17419439-ATT-A,AT hg38:Y:15307559-ATT-A,AT | 25×T | *** | |||||
| hg19:Y:17448497-A-T hg38:Y:15336617-A-T | *** | ||||||
| hg19:Y:18933097-A-G hg38:Y:16821217-A-G | *** | ||||||
| hg19:Y:19189392-C-A hg38:Y:17077512-C-A | *** | ||||||
| hg19:Y:19293971-C-A hg38:Y:17182091-C-A | *** | ||||||
| hg19:Y:21164768-C-A hg38:Y:19002882-C-A | *** | ||||||
| hg19:Y:21323817-G-T hg38:Y:19161931-G-T | *** | ||||||
| hg19:Y:21464765-C-A hg38:Y:19302879-C-A | *** | ||||||
| hg19:Y:21625202-C-A hg38:Y:19463316-C-A | *** | ||||||
| hg19:Y:21798986-A-T hg38:Y:19637100-A-T | *** | ||||||
| hg19:Y:21976347-C-A hg38:Y:19814461-C-A | *** | ||||||
| hg19:Y:22011809-C-A hg38:Y:19849923-C-A | *** | ||||||
| hg19:Y:22027353-T-TAA hg38:Y:19865467-T-TAA | 14×A | *** | |||||
| hg19:Y:22202891-T-G hg38:Y:20041005-T-G | *** | ||||||
| hg19:Y:23335853-C-A hg38:Y:21173967-C-A | *** | ||||||
| hg19:Y:23445307-C-A hg38:Y:21283421-C-A | *** | ||||||
| hg19:Y:23579503-C-A hg38:Y:21417617-C-A | *** | ||||||
| hg19:Y:23624189-C-A hg38:Y:21462303-C-A | *** | ||||||
| hg19:Y:28742931-C-A hg38:Y:26596784-C-A | *** | ||||||
| hg38:Y:56835888-C-G | *** | ||||||
| hg38:Y2:36575-A-C | *** | ||||||
| hg38:Y2:36576-T-C | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 4137 | 9121470 | 7475344 | 7406008 |
| Used in age calculations | 9121470 | 7475344 | 7406008 |
| Counts of SNPs | 0 | 0 |
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