Larsson
BigY2: 466618MDKA Birth:
SwedenTree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
| Position | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 466618 |
|---|---|---|---|---|---|---|---|
| hg19:Y:16255867-C-T hg38:Y:14143987-C-T | F11909 | Y | Y | + | |||
| hg19:Y:17144797-G-T hg38:Y:15032917-G-T | Y52832 | Y | Y | + | |||
| hg19:Y:18572756-T-C hg38:Y:16460876-T-C | BY122296 | Y | Y | + | |||
| hg19:Y:24425383-A-G hg38:Y:22279236-A-G | Y112823 | Y | + | ||||
| hg19:Y:13711423-A-AG hg38:Y:11555747-A-AG | DYZ17 | ** | |||||
| hg19:Y:16971415-G-T hg38:Y:14859535-G-T | ** | ||||||
| hg19:Y:6808132-T-A hg38:Y:6940091-T-A | ** | ||||||
| hg19:Y:22540573-C-T hg38:Y:20378687-C-T | FT298955 | ** | |||||
| hg19:Y:22234761-A-C hg38:Y:20072875-A-C | DYZ19 | ** | |||||
| hg19:Y:13709316-G-C hg38:Y:11553640-G-C | DYZ17 | ** | |||||
| hg19:Y:9938389-C-A hg38:Y:10100780-C-A | Z20131 | ** | |||||
| hg19:Y:21668736-C-A hg38:Y:19506850-C-A | ** | ||||||
| hg19:Y:21409093-C-A hg38:Y:19247207-C-A | ** | ||||||
| hg19:Y:5358751-C-A hg38:Y:5490710-C-A | ** | ||||||
| hg19:Y:13193998-C-A hg38:Y:11038322-C-A | ** | ||||||
| hg19:Y:19079092-C-A hg38:Y:16967212-C-A | ** | ||||||
| hg38:Y:10648112-C-T | ** | ||||||
| hg19:Y:28463958-C-A hg38:Y:26317811-C-A | ** | ||||||
| hg38:Y:10751074-C-A | ** | ||||||
| hg19:Y:4408803-C-A hg38:Y:4540762-C-A | ** | ||||||
| hg19:Y:4174915-C-A hg38:Y:4306874-C-A | ** | ||||||
| hg19:Y:16070695-C-A hg38:Y:13958815-C-A | ** | ||||||
| hg19:Y:7116017-C-A hg38:Y:7247976-C-A | ** | ||||||
| hg38:Y:10889497-C-A | FGC78271 | ** | |||||
| hg38:Y:10938056-A-T | FT437331 | ** | |||||
| hg38:Y:10938073-G-T | ** | ||||||
| hg38:Y:10881634-ACATTC-A | ** | ||||||
| hg19:Y:5310268-C-A hg38:Y:5442227-C-A | ** | ||||||
| hg38:Y:10870001-C-A | ** | ||||||
| hg38:Y:10958853-T-A | ** | ||||||
| hg19:Y:28794210-G-C hg38:Y:26648063-G-C | ** | ||||||
| hg19:Y:20666087-T-TG hg38:Y:18504201-T-TG | P4_Prx | ** | |||||
| hg38:Y:10769681-A-T | ** | ||||||
| hg19:Y:16968382-C-A hg38:Y:14856502-C-A | ** | ||||||
| hg19:Y:13199303-C-A hg38:Y:11043627-C-A | ** | ||||||
| hg19:Y:13698544-A-T hg38:Y:11542868-A-T | DYZ17 | ** | |||||
| hg19:Y:2708467-A-C hg38:Y:2840426-A-C | ** | ||||||
| hg19:Y:13255208-C-A hg38:Y:11099532-C-A | ** | ||||||
| hg19:Y:22801902-A-G hg38:Y:20640016-A-G | ** | ||||||
| hg38:Y:10760415-C-T | ** | ||||||
| hg38:Y:10883115-C-T | ** | ||||||
| hg38:Y:10825318-T-C | ** | ||||||
| hg38:Y:10754958-A-T | ** | ||||||
| hg19:Y:28806410-G-A hg38:Y:26660263-G-A | ** | ||||||
| hg19:Y:28806423-G-C hg38:Y:26660276-G-C | ** | ||||||
| hg19:Y:28806425-C-A hg38:Y:26660278-C-A | ** | ||||||
| hg19:Y:28806435-AGTGGAGTGGC-A hg38:Y:26660288-AGTGGAGTGGC-A | ** | ||||||
| hg19:Y:28806459-G-C hg38:Y:26660312-G-C | ** | ||||||
| hg19:Y:28806475-A-C hg38:Y:26660328-A-C | ** | ||||||
| hg19:Y:28806477-T-A hg38:Y:26660330-T-A | ** | ||||||
| hg19:Y:28806479-G-A hg38:Y:26660332-G-A | ** | ||||||
| hg19:Y:28806482-T-C hg38:Y:26660335-T-C | ** | ||||||
| hg19:Y:28806493-G-A hg38:Y:26660346-G-A | ** | ||||||
| hg19:Y:28806504-G-A hg38:Y:26660357-G-A | ** | ||||||
| hg19:Y:28806511-A-G hg38:Y:26660364-A-G | ** | ||||||
| hg19:Y:28806513-G-T hg38:Y:26660366-G-T | ** | ||||||
| hg19:Y:28806516-G-A hg38:Y:26660369-G-A | ** | ||||||
| hg38:Y:10763018-T-C | ** | ||||||
| hg19:Y:3626432-T-G hg38:Y:3758391-T-G | ** | ||||||
| hg38:Y:10760302-C-T | ** | ||||||
| hg19:Y:23807453-G-A hg38:Y:21645567-G-A | ** | ||||||
| hg19:Y:5865426-C-A hg38:Y:5997385-C-A | ** | ||||||
| hg19:Y:21154017-C-A hg38:Y:18992131-C-A | ** | ||||||
| hg19:Y:5212114-GA-G hg38:Y:5344073-GA-G | ** | ||||||
| hg38:Y:10792725-C-T | ** | ||||||
| hg19:Y:2817095-G-A hg38:Y:2949054-G-A | FGC74184 | ** | |||||
| hg38:Y:10837808-A-T | FT90747 | ** | |||||
| hg19:Y:5125768-A-T hg38:Y:5257727-A-T | ** | ||||||
| hg38:Y:11657268-C-A | DYZ17 | ** | |||||
| hg19:Y:9974268-C-A hg38:Y:10136659-C-A | ** | ||||||
| hg38:Y:10938051-T-A | ** | ||||||
| hg38:Y:10938064-C-G | ** | ||||||
| hg38:Y:10756867-C-A | FT429843 | ** | |||||
| hg19:Y:2884752-C-A hg38:Y:3016711-C-A | ** | ||||||
| hg19:Y:2960233-A-T hg38:Y:3092192-A-T | ** | ||||||
| hg19:Y:2962249-C-A hg38:Y:3094208-C-A | ** | ||||||
| hg19:Y:3005998-C-A hg38:Y:3137957-C-A | ** | ||||||
| hg19:Y:3033187-T-A hg38:Y:3165146-T-A | ** | ||||||
| hg19:Y:3093799-T-C hg38:Y:3225758-T-C | ** | ||||||
| hg19:Y:3123360-G-T hg38:Y:3255319-G-T | ** | ||||||
| hg19:Y:3330288-A-T hg38:Y:3462247-A-T | ** | ||||||
| hg19:Y:3346447-C-A hg38:Y:3478406-C-A | ** | ||||||
| hg19:Y:3346452-T-A hg38:Y:3478411-T-A | ** | ||||||
| hg19:Y:3371892-G-C hg38:Y:3503851-G-C | ** | ||||||
| hg19:Y:3372047-C-G hg38:Y:3504006-C-G | ** | ||||||
| hg19:Y:3464565-A-C hg38:Y:3596524-A-C | ** | ||||||
| hg19:Y:3544390-C-A hg38:Y:3676349-C-A | ** | ||||||
| hg19:Y:3686629-G-T hg38:Y:3818588-G-T | ** | ||||||
| hg19:Y:3726591-C-A hg38:Y:3858550-C-A | ** | ||||||
| hg19:Y:3732113-T-A hg38:Y:3864072-T-A | ** | ||||||
| hg19:Y:3834680-C-A hg38:Y:3966639-C-A | ** | ||||||
| hg19:Y:3853232-C-A hg38:Y:3985191-C-A | ** | ||||||
| hg19:Y:3853334-T-A hg38:Y:3985293-T-A | ** | ||||||
| hg19:Y:3853534-T-G hg38:Y:3985493-T-G | ** | ||||||
| hg19:Y:3986129-C-A hg38:Y:4118088-C-A | ** | ||||||
| hg19:Y:4017102-C-G hg38:Y:4149061-C-G | ** | ||||||
| hg19:Y:4067748-T-C hg38:Y:4199707-T-C | ** | ||||||
| hg19:Y:4116088-A-G hg38:Y:4248047-A-G | ** | ||||||
| hg19:Y:4228908-G-T hg38:Y:4360867-G-T | ** | ||||||
| hg19:Y:4228948-G-T hg38:Y:4360907-G-T | ** | ||||||
| hg19:Y:4387949-C-A hg38:Y:4519908-C-A | ** | ||||||
| hg19:Y:4553066-A-C hg38:Y:4685025-A-C | ** | ||||||
| hg19:Y:4756596-T-G hg38:Y:4888555-T-G | ** | ||||||
| hg19:Y:4757078-A-T hg38:Y:4889037-A-T | ** | ||||||
| hg19:Y:4875291-C-T hg38:Y:5007250-C-T | ** | ||||||
| hg19:Y:4888068-T-C hg38:Y:5020027-T-C | ** | ||||||
| hg19:Y:5056383-T-G hg38:Y:5188342-T-G | ** | ||||||
| hg19:Y:5061924-C-A hg38:Y:5193883-C-A | ** | ||||||
| hg19:Y:5279003-A-G hg38:Y:5410962-A-G | ** | ||||||
| hg19:Y:5336976-A-T hg38:Y:5468935-A-T | ** | ||||||
| hg19:Y:5523608-C-A hg38:Y:5655567-C-A | ** | ||||||
| hg19:Y:5545047-T-A hg38:Y:5677006-T-A | ** | ||||||
| hg19:Y:5560606-C-G hg38:Y:5692565-C-G | ** | ||||||
| hg19:Y:5650530-C-A hg38:Y:5782489-C-A | ** | ||||||
| hg19:Y:5819515-C-A hg38:Y:5951474-C-A | ** | ||||||
| hg19:Y:5830175-C-A hg38:Y:5962134-C-A | ** | ||||||
| hg19:Y:5859259-T-C hg38:Y:5991218-T-C | ** | ||||||
| hg19:Y:5927348-A-T hg38:Y:6059307-A-T | ** | ||||||
| hg19:Y:5976339-T-G hg38:Y:6108298-T-G | ** | ||||||
| hg19:Y:6106047-G-T hg38:Y:6238006-G-T | ** | ||||||
| hg19:Y:6106061-C-CAA hg38:Y:6238020-C-CAA | 20×A | ** | |||||
| hg19:Y:6106088-C-A hg38:Y:6238047-C-A | ** | ||||||
| hg19:Y:6106095-C-A hg38:Y:6238054-C-A | ** | ||||||
| hg19:Y:6268624-TGTG-T hg38:Y:6400583-TGTG-T | IR3_Dst | ** | |||||
| hg19:Y:6352517-A-G hg38:Y:6484476-A-G | ** | ||||||
| hg19:Y:6357907-G-T hg38:Y:6489866-G-T | ** | ||||||
| hg19:Y:6367474-C-A hg38:Y:6499433-C-A | ** | ||||||
| hg19:Y:6454668-C-A hg38:Y:6586627-C-A | ** | ||||||
| hg19:Y:6626786-A-C hg38:Y:6758745-A-C | ** | ||||||
| hg19:Y:6712564-G-T hg38:Y:6844523-G-T | ** | ||||||
| hg19:Y:6731238-A-T hg38:Y:6863197-A-T | ** | ||||||
| hg19:Y:6748089-T-A hg38:Y:6880048-T-A | ** | ||||||
| hg19:Y:6770646-C-A hg38:Y:6902605-C-A | ** | ||||||
| hg19:Y:6828652-C-A hg38:Y:6960611-C-A | ** | ||||||
| hg19:Y:6922967-T-C hg38:Y:7054926-T-C | ** | ||||||
| hg19:Y:6996798-T-G hg38:Y:7128757-T-G | ** | ||||||
| hg19:Y:7029884-G-A hg38:Y:7161843-G-A | ** | ||||||
| hg19:Y:7041058-C-A hg38:Y:7173017-C-A | ** | ||||||
| hg19:Y:7099942-C-A hg38:Y:7231901-C-A | ** | ||||||
| hg19:Y:7128149-G-C hg38:Y:7260108-G-C | ** | ||||||
| hg19:Y:7154652-C-A hg38:Y:7286611-C-A | ** | ||||||
| hg19:Y:7202160-A-T hg38:Y:7334119-A-T | ** | ||||||
| hg19:Y:7237205-T-C hg38:Y:7369164-T-C | ** | ||||||
| hg19:Y:7238240-C-A hg38:Y:7370199-C-A | ** | ||||||
| hg19:Y:7242602-A-T hg38:Y:7374561-A-T | ** | ||||||
| hg19:Y:7501952-C-T hg38:Y:7633911-C-T | IR1_L | ** | |||||
| hg19:Y:7614025-G-A hg38:Y:7745984-G-A | ** | ||||||
| hg19:Y:7664748-C-A hg38:Y:7796707-C-A | ** | ||||||
| hg19:Y:7896673-C-A hg38:Y:8028632-C-A | ** | ||||||
| hg19:Y:8153856-C-A hg38:Y:8285815-C-A | ** | ||||||
| hg19:Y:8172682-C-A hg38:Y:8304641-C-A | ** | ||||||
| hg19:Y:8296809-T-G hg38:Y:8428768-T-G | ** | ||||||
| hg19:Y:8325425-T-A hg38:Y:8457384-T-A | ** | ||||||
| hg19:Y:8379299-C-A hg38:Y:8511258-C-A | ** | ||||||
| hg19:Y:8969461-C-A hg38:Y:9131852-C-A | ** | ||||||
| hg19:Y:9007173-C-A hg38:Y:9169564-C-A | ** | ||||||
| hg19:Y:9015506-G-T hg38:Y:9177897-G-T | ** | ||||||
| hg19:Y:9030377-G-T hg38:Y:9192768-G-T | ** | ||||||
| hg19:Y:9211368-C-T hg38:Y:9373759-C-T | ** | ||||||
| hg19:Y:9381915-C-A hg38:Y:9544306-C-A | ** | ||||||
| hg19:Y:9444637-C-A hg38:Y:9607028-C-A | ** | ||||||
| hg19:Y:9507965-A-T hg38:Y:9670356-A-T | ** | ||||||
| hg19:Y:9507982-C-A hg38:Y:9670373-C-A | 34×T | ** | |||||
| hg19:Y:9899532-A-C hg38:Y:10061923-A-C | ** | ||||||
| hg19:Y:9933890-GT-G hg38:Y:10096281-GT-G | ** | ||||||
| hg19:Y:10019797-A-G hg38:Y:10182188-A-G | ** | ||||||
| hg19:Y:10067221-G-T hg38:Y:10229612-G-T | ** | ||||||
| hg19:Y:10093771-C-T hg38:Y:10256162-C-T | ** | ||||||
| hg38:Y:10625622-C-A | ** | ||||||
| hg38:Y:10629620-T-A | ** | ||||||
| hg38:Y:10629627-C-T | ** | ||||||
| hg38:Y:10629654-T-A | ** | ||||||
| hg38:Y:10629665-T-G | ** | ||||||
| hg38:Y:10648071-C-T | ** | ||||||
| hg38:Y:10657824-A-T | ** | ||||||
| hg38:Y:10659532-CAT-C | ** | ||||||
| hg38:Y:10661351-C-A | ** | ||||||
| hg38:Y:10670903-T-G | ** | ||||||
| hg38:Y:10748845-C-A | ** | ||||||
| hg38:Y:10751075-A-T | ** | ||||||
| hg38:Y:10754918-A-G | ** | ||||||
| hg38:Y:10754928-A-T | ** | ||||||
| hg38:Y:10756862-C-A | ** | ||||||
| hg38:Y:10760286-A-C | ** | ||||||
| hg38:Y:10760290-CGAATG-C | ** | ||||||
| hg38:Y:10760308-T-G | ** | ||||||
| hg38:Y:10763008-T-G | ** | ||||||
| hg38:Y:10763023-C-G | ** | ||||||
| hg38:Y:10763023-CTGCAT-C | ** | ||||||
| hg38:Y:10763033-T-G | ** | ||||||
| hg38:Y:10765140-G-T | ** | ||||||
| hg38:Y:10767320-G-T | ** | ||||||
| hg38:Y:10767685-C-G | ** | ||||||
| hg38:Y:10767744-T-A | ** | ||||||
| hg38:Y:10786268-A-T | ** | ||||||
| hg38:Y:10804776-ATT-C | ** | ||||||
| hg38:Y:10804780-T-TAA | ** | ||||||
| hg38:Y:10804792-T-C | ** | ||||||
| hg38:Y:10804797-T-C | ** | ||||||
| hg38:Y:10804809-C-T | ** | ||||||
| hg38:Y:10827942-T-C | ** | ||||||
| hg38:Y:10844043-C-T | ** | ||||||
| hg38:Y:10844419-G-T | ** | ||||||
| hg38:Y:10844422-T-A | ** | ||||||
| hg38:Y:10844430-T-G | ** | ||||||
| hg38:Y:10844439-A-T | ** | ||||||
| hg38:Y:10849763-C-T | ** | ||||||
| hg38:Y:10851814-A-T | ** | ||||||
| hg38:Y:10852545-C-A | ** | ||||||
| hg38:Y:10857489-T-G | ** | ||||||
| hg38:Y:10857983-C-A | ** | ||||||
| hg38:Y:10869981-C-T | ** | ||||||
| hg38:Y:10880349-C-CTCCAT | ** | ||||||
| hg38:Y:10935593-A-ACTCCT | ** | ||||||
| hg38:Y:10938015-C-A | ** | ||||||
| hg38:Y:10938024-CCATTT-C | ** | ||||||
| hg38:Y:10938046-A-C | ** | ||||||
| hg38:Y:10938069-G-T | ** | ||||||
| hg38:Y:10938082-C-A | ** | ||||||
| hg38:Y:10938083-A-C | ** | ||||||
| hg38:Y:10941542-C-A | ** | ||||||
| hg38:Y:10945925-A-G | ** | ||||||
| hg38:Y:10949537-C-G | ** | ||||||
| hg38:Y:10949548-C-A | ** | ||||||
| hg38:Y:10949560-T-A | ** | ||||||
| hg38:Y:10949565-T-TTCCAA | ** | ||||||
| hg38:Y:10950762-A-C | ** | ||||||
| hg38:Y:10958858-T-G | ** | ||||||
| hg38:Y:10962798-T-A | ** | ||||||
| hg38:Y:10973980-T-C | ** | ||||||
| hg38:Y:10981452-C-A | ** | ||||||
| hg38:Y:10982331-C-A | ** | ||||||
| hg38:Y:10982691-C-A | ** | ||||||
| hg38:Y:10993010-A-ACTCCG | ** | ||||||
| hg38:Y:10993023-C-G | ** | ||||||
| hg38:Y:10993038-C-A | ** | ||||||
| hg38:Y:10994107-TTCCG-T | ** | ||||||
| hg38:Y:10998572-A-T | ** | ||||||
| hg38:Y:11002116-T-C | ** | ||||||
| hg38:Y:11003164-C-A | ** | ||||||
| hg38:Y:11017495-G-T | ** | ||||||
| hg38:Y:11025925-T-A | ** | ||||||
| hg38:Y:11025978-C-A | ** | ||||||
| hg38:Y:11033167-C-A | ** | ||||||
| hg19:Y:13196899-C-A hg38:Y:11041223-C-A | ** | ||||||
| hg19:Y:13236259-C-A hg38:Y:11080583-C-A | ** | ||||||
| hg19:Y:13266954-G-T hg38:Y:11111278-G-T | ** | ||||||
| hg19:Y:13280197-C-A hg38:Y:11124521-C-A | ** | ||||||
| hg19:Y:13361430-T-G hg38:Y:11205754-T-G | ** | ||||||
| hg19:Y:13367744-C-A hg38:Y:11212068-C-A | ** | ||||||
| hg19:Y:13371515-A-T hg38:Y:11215839-A-T | ** | ||||||
| hg19:Y:13432687-C-A hg38:Y:11277011-C-A | ** | ||||||
| hg19:Y:13460291-G-T hg38:Y:11304615-G-T | ** | ||||||
| hg19:Y:13460295-A-G hg38:Y:11304619-A-G | ** | ||||||
| hg19:Y:13460907-A-G hg38:Y:11305231-A-G | ** | ||||||
| hg19:Y:13460911-G-A hg38:Y:11305235-G-A | ** | ||||||
| hg19:Y:13480779-G-T hg38:Y:11325103-G-T | ** | ||||||
| hg19:Y:13572362-A-G hg38:Y:11416686-A-G | ** | ||||||
| hg19:Y:13594875-G-T hg38:Y:11439199-G-T | ** | ||||||
| hg19:Y:13698529-A-T hg38:Y:11542853-A-T | DYZ17 | ** | |||||
| hg19:Y:13705469-T-A hg38:Y:11549793-T-A | DYZ17 | ** | |||||
| hg19:Y:13708552-T-A hg38:Y:11552876-T-A | DYZ17 | ** | |||||
| hg19:Y:13708559-T-A hg38:Y:11552883-T-A | DYZ17 | ** | |||||
| hg19:Y:13709306-C-G hg38:Y:11553630-C-G | DYZ17 | ** | |||||
| hg19:Y:13709317-A-G hg38:Y:11553641-A-G | DYZ17 | ** | |||||
| hg38:Y:11655242-G-T | DYZ17 | ** | |||||
| hg38:Y:11660025-T-A | DYZ17 | ** | |||||
| hg38:Y:11675701-G-C | DYZ17 | ** | |||||
| hg38:Y:11676501-G-T | DYZ17 | ** | |||||
| hg38:Y:11676714-A-T | DYZ17 | ** | |||||
| hg19:Y:13828329-A-G hg38:Y:11707623-A-G | DYZ17 | ** | |||||
| hg19:Y:13886148-G-T hg38:Y:11765442-G-T | ** | ||||||
| hg19:Y:13935030-T-C hg38:Y:11814324-T-C | ** | ||||||
| hg19:Y:13946164-C-A hg38:Y:11825458-C-A | ** | ||||||
| hg19:Y:13996349-C-A hg38:Y:11875643-C-A | ** | ||||||
| hg19:Y:13997581-A-T hg38:Y:11876875-A-T | ** | ||||||
| hg19:Y:13997798-T-A hg38:Y:11877092-T-A | ** | ||||||
| hg19:Y:14025904-G-T hg38:Y:11905198-G-T | ** | ||||||
| hg19:Y:14224379-C-G hg38:Y:12103673-C-G | ** | ||||||
| hg19:Y:14224381-C-G hg38:Y:12103675-C-G | ** | ||||||
| hg19:Y:14328391-C-A hg38:Y:12207685-C-A | ** | ||||||
| hg19:Y:14344173-T-G hg38:Y:12223468-T-G | ** | ||||||
| hg19:Y:14359923-G-GAA hg38:Y:12239218-G-GAA | 14×A | ** | |||||
| hg19:Y:14380924-A-C hg38:Y:12260220-A-C | ** | ||||||
| hg19:Y:14420219-T-G hg38:Y:12299494-T-G | ** | ||||||
| hg19:Y:14468391-A-C hg38:Y:12347660-A-C | ** | ||||||
| hg19:Y:14507650-C-A hg38:Y:12395855-C-A | ** | ||||||
| hg19:Y:14510002-A-C hg38:Y:12398207-A-C | ** | ||||||
| hg19:Y:14527583-C-A hg38:Y:12415784-C-A | ** | ||||||
| hg19:Y:14717109-T-G hg38:Y:12605177-T-G | ** | ||||||
| hg19:Y:14741912-C-T hg38:Y:12629980-C-T | ** | ||||||
| hg19:Y:14765135-G-T hg38:Y:12653204-G-T | ** | ||||||
| hg19:Y:14815983-T-G hg38:Y:12704054-T-G | ** | ||||||
| hg19:Y:15114212-T-C hg38:Y:13002299-T-C | ** | ||||||
| hg19:Y:15138126-C-A hg38:Y:13026213-C-A | ** | ||||||
| hg19:Y:15191231-T-G hg38:Y:13079317-T-G | ** | ||||||
| hg19:Y:15211184-G-T hg38:Y:13099270-G-T | ** | ||||||
| hg19:Y:15239606-A-T hg38:Y:13127692-A-T | ** | ||||||
| hg19:Y:15239637-T-A hg38:Y:13127723-T-A | ** | ||||||
| hg19:Y:15320737-C-A hg38:Y:13208855-C-A | ** | ||||||
| hg19:Y:15364723-T-G hg38:Y:13252843-T-G | ** | ||||||
| hg19:Y:15396940-C-A hg38:Y:13285060-C-A | ** | ||||||
| hg19:Y:15481278-TA-T hg38:Y:13369398-TA-T | ** | ||||||
| hg19:Y:15495193-C-A hg38:Y:13383313-C-A | ** | ||||||
| hg19:Y:15600015-T-G hg38:Y:13488135-T-G | ** | ||||||
| hg19:Y:15671105-T-A hg38:Y:13559225-T-A | ** | ||||||
| hg19:Y:15728742-A-C hg38:Y:13616862-A-C | ** | ||||||
| hg19:Y:15761769-A-T hg38:Y:13649889-A-T | ** | ||||||
| hg19:Y:15769161-C-A hg38:Y:13657281-C-A | ** | ||||||
| hg19:Y:15786567-G-T hg38:Y:13674687-G-T | ** | ||||||
| hg19:Y:15824065-T-C hg38:Y:13712185-T-C | ** | ||||||
| hg19:Y:15918654-A-T hg38:Y:13806774-A-T | ** | ||||||
| hg19:Y:15927756-G-T hg38:Y:13815876-G-T | ** | ||||||
| hg19:Y:15927850-C-A hg38:Y:13815970-C-A | ** | ||||||
| hg19:Y:15986642-C-A hg38:Y:13874762-C-A | ** | ||||||
| hg19:Y:16004196-G-T hg38:Y:13892316-G-T | ** | ||||||
| hg19:Y:16028611-G-A hg38:Y:13916731-G-A | ** | ||||||
| hg19:Y:16047603-C-A hg38:Y:13935723-C-A | ** | ||||||
| hg19:Y:16210750-T-G hg38:Y:14098870-T-G | Y139137 | ** | |||||
| hg19:Y:16319231-T-A hg38:Y:14207351-T-A | ** | ||||||
| hg19:Y:16323838-T-A hg38:Y:14211958-T-A | ** | ||||||
| hg19:Y:16323844-C-A hg38:Y:14211964-C-A | ** | ||||||
| hg19:Y:16323853-T-A hg38:Y:14211973-T-A | ** | ||||||
| hg19:Y:16399874-A-G hg38:Y:14287994-A-G | ** | ||||||
| hg19:Y:16432697-C-A hg38:Y:14320817-C-A | ** | ||||||
| hg19:Y:16463442-G-A hg38:Y:14351562-G-A | ** | ||||||
| hg19:Y:16505007-C-A hg38:Y:14393127-C-A | ** | ||||||
| hg19:Y:16588458-C-A hg38:Y:14476578-C-A | ** | ||||||
| hg19:Y:16598666-A-C hg38:Y:14486786-A-C | ** | ||||||
| hg19:Y:16618591-G-A hg38:Y:14506711-G-A | ** | ||||||
| hg19:Y:16640336-C-A hg38:Y:14528456-C-A | ** | ||||||
| hg19:Y:16719695-G-A hg38:Y:14607815-G-A | FT187442 | ** | |||||
| hg19:Y:16971861-T-A hg38:Y:14859981-T-A | ** | ||||||
| hg19:Y:17213143-A-C hg38:Y:15101263-A-C | ** | ||||||
| hg19:Y:17406902-T-C hg38:Y:15295022-T-C | ** | ||||||
| hg19:Y:17503378-T-G hg38:Y:15391498-T-G | ** | ||||||
| hg19:Y:17547922-G-A hg38:Y:15436042-G-A | ** | ||||||
| hg19:Y:17575479-GATT-G hg38:Y:15463599-GATT-G | ** | ||||||
| hg19:Y:17584170-G-A hg38:Y:15472290-G-A | ** | ||||||
| hg19:Y:17629625-T-A hg38:Y:15517745-T-A | ** | ||||||
| hg19:Y:17756785-C-A hg38:Y:15644905-C-A | ** | ||||||
| hg19:Y:17788869-G-T hg38:Y:15676989-G-T | ** | ||||||
| hg19:Y:17884580-T-A hg38:Y:15772700-T-A | ** | ||||||
| hg19:Y:17968838-C-A hg38:Y:15856958-C-A | ** | ||||||
| hg19:Y:17994874-C-CAA hg38:Y:15882994-C-CAA | P7_Prx | 39×A | ** | ||||
| hg19:Y:18071814-A-T hg38:Y:15959934-A-T | ** | ||||||
| hg19:Y:18088381-G-A hg38:Y:15976501-G-A | ** | ||||||
| hg19:Y:18154459-T-G hg38:Y:16042579-T-G | ** | ||||||
| hg19:Y:18195999-G-A hg38:Y:16084119-G-A | ** | ||||||
| hg19:Y:18244599-G-C hg38:Y:16132719-G-C | ** | ||||||
| hg19:Y:18263393-C-A hg38:Y:16151513-C-A | ** | ||||||
| hg19:Y:18361465-ATC-A hg38:Y:16249585-ATC-A | P6_Prx | ** | |||||
| hg19:Y:18361468-A-AAC hg38:Y:16249588-A-AAC | P6_Prx | ** | |||||
| hg19:Y:18371620-C-A hg38:Y:16259740-C-A | P6_Prx | ** | |||||
| hg19:Y:18407027-T-A hg38:Y:16295147-T-A | P6_Gap | ** | |||||
| hg19:Y:18407038-C-T hg38:Y:16295158-C-T | P6_Gap | ** | |||||
| hg19:Y:18688253-A-T hg38:Y:16576373-A-T | ** | ||||||
| hg19:Y:18710485-C-A hg38:Y:16598605-C-A | ** | ||||||
| hg19:Y:18749376-C-A hg38:Y:16637496-C-A | ** | ||||||
| hg19:Y:18928709-G-A hg38:Y:16816829-G-A | ** | ||||||
| hg19:Y:18990874-A-T hg38:Y:16878994-A-T | ** | ||||||
| hg19:Y:19250139-T-G hg38:Y:17138259-T-G | ** | ||||||
| hg19:Y:19250152-T-G hg38:Y:17138272-T-G | ** | ||||||
| hg19:Y:19250180-G-C hg38:Y:17138300-G-C | ** | ||||||
| hg19:Y:19358625-A-G hg38:Y:17246745-A-G | ** | ||||||
| hg19:Y:19462285-C-A hg38:Y:17350405-C-A | ** | ||||||
| hg19:Y:19517746-C-A hg38:Y:17405866-C-A | ** | ||||||
| hg19:Y:19531492-C-A hg38:Y:17419612-C-A | ** | ||||||
| hg19:Y:19581121-G-T hg38:Y:17469241-G-T | P5_Prx | ** | |||||
| hg19:Y:19625166-C-A hg38:Y:17513286-C-A | P5_Prx | ** | |||||
| hg19:Y:20125674-G-T hg38:Y:18013794-G-T | P5_Dst | ** | |||||
| hg19:Y:20428027-A-T hg38:Y:18266141-A-T | P5_Dst | ** | |||||
| hg19:Y:20428075-C-A hg38:Y:18266189-C-A | P5_Dst | ** | |||||
| hg19:Y:20428092-A-T hg38:Y:18266206-A-T | P5_Dst | ** | |||||
| hg19:Y:20757394-T-A hg38:Y:18595508-T-A | BY212341 | P4_Prx | ** | ||||
| hg19:Y:20762209-A-T hg38:Y:18600323-A-T | P4_Prx | ** | |||||
| hg19:Y:20762223-C-A hg38:Y:18600337-C-A | P4_Prx | ** | |||||
| hg19:Y:20762245-A-T hg38:Y:18600359-A-T | P4_Prx | ** | |||||
| hg19:Y:20815811-G-T hg38:Y:18653925-G-T | P4_Gap | ** | |||||
| hg19:Y:21106907-A-T hg38:Y:18945021-A-T | ** | ||||||
| hg19:Y:21106931-A-C hg38:Y:18945045-A-C | ** | ||||||
| hg19:Y:21118563-A-C hg38:Y:18956677-A-C | ** | ||||||
| hg19:Y:21196652-C-A hg38:Y:19034766-C-A | ** | ||||||
| hg19:Y:21225101-C-A hg38:Y:19063215-C-A | ** | ||||||
| hg19:Y:21408452-A-C hg38:Y:19246566-A-C | ** | ||||||
| hg19:Y:21422289-T-G hg38:Y:19260403-T-G | ** | ||||||
| hg19:Y:21427072-G-T hg38:Y:19265186-G-T | ** | ||||||
| hg19:Y:21457969-G-T hg38:Y:19296083-G-T | ** | ||||||
| hg19:Y:21473736-G-T hg38:Y:19311850-G-T | ** | ||||||
| hg19:Y:21556681-C-A hg38:Y:19394795-C-A | FT93389 | ** | |||||
| hg19:Y:21697210-C-G hg38:Y:19535324-C-G | ** | ||||||
| hg19:Y:21819001-C-A hg38:Y:19657115-C-A | ** | ||||||
| hg19:Y:22090201-T-G hg38:Y:19928315-T-G | ** | ||||||
| hg19:Y:22146540-C-A hg38:Y:19984654-C-A | ** | ||||||
| hg19:Y:22172607-G-T hg38:Y:20010721-G-T | ** | ||||||
| hg19:Y:22203738-C-A hg38:Y:20041852-C-A | ** | ||||||
| hg19:Y:22234767-A-T hg38:Y:20072881-A-T | DYZ19 | ** | |||||
| hg19:Y:22262476-C-A hg38:Y:20100590-C-A | DYZ19 | ** | |||||
| hg19:Y:22262478-T-A hg38:Y:20100592-T-A | DYZ19 | ** | |||||
| hg19:Y:22262519-T-A hg38:Y:20100633-T-A | DYZ19 | ** | |||||
| hg19:Y:22282015-A-T hg38:Y:20120129-A-T | DYZ19 | ** | |||||
| hg19:Y:22282059-C-A hg38:Y:20120173-C-A | DYZ19 | ** | |||||
| hg19:Y:22548054-T-A hg38:Y:20386168-T-A | ** | ||||||
| hg19:Y:22991018-T-A hg38:Y:20829132-T-A | ** | ||||||
| hg19:Y:23184476-G-A hg38:Y:21022590-G-A | FT250258 | ** | |||||
| hg19:Y:23184489-A-C hg38:Y:21022603-A-C | ** | ||||||
| hg19:Y:23188494-T-G hg38:Y:21026608-T-G | ** | ||||||
| hg19:Y:23190373-G-T hg38:Y:21028487-G-T | ** | ||||||
| hg19:Y:23209769-C-A hg38:Y:21047883-C-A | ** | ||||||
| hg19:Y:23338861-G-T hg38:Y:21176975-G-T | ** | ||||||
| hg19:Y:23341661-A-T hg38:Y:21179775-A-T | ** | ||||||
| hg19:Y:23350660-C-A hg38:Y:21188774-C-A | ** | ||||||
| hg19:Y:23419578-T-C hg38:Y:21257692-T-C | ** | ||||||
| hg19:Y:23779889-C-A hg38:Y:21618003-C-A | ** | ||||||
| hg19:Y:23806997-A-T hg38:Y:21645111-A-T | ** | ||||||
| hg19:Y:23807416-T-TA hg38:Y:21645530-T-TA | ** | ||||||
| hg19:Y:23807442-A-C hg38:Y:21645556-A-C | ** | ||||||
| hg19:Y:23807449-G-A hg38:Y:21645563-G-A | ** | ||||||
| hg19:Y:23807484-G-C hg38:Y:21645598-G-C | ** | ||||||
| hg19:Y:23875557-T-A hg38:Y:21713671-T-A | ** | ||||||
| hg19:Y:23954035-T-G hg38:Y:21807888-T-G | ** | ||||||
| hg19:Y:24293154-C-A hg38:Y:22147007-C-A | P3_t1 | ** | |||||
| hg19:Y:24475295-C-A hg38:Y:22329148-C-A | ** | ||||||
| hg19:Y:25651031-A-T hg38:Y:23504884-A-T | P1_b3 | ** | |||||
| hg19:Y:25651037-C-G hg38:Y:23504890-C-G | P1_b3 | ** | |||||
| hg19:Y:25651046-A-T hg38:Y:23504899-A-T | P1_b3 | ** | |||||
| hg19:Y:25651057-A-T hg38:Y:23504910-A-T | P1_b3 | ** | |||||
| hg19:Y:25651070-A-T hg38:Y:23504923-A-T | P1_b3 | ** | |||||
| hg19:Y:25651071-C-G hg38:Y:23504924-C-G | P1_b3 | ** | |||||
| hg19:Y:25651073-A-T hg38:Y:23504926-A-T | P1_b3 | ** | |||||
| hg19:Y:25885039-A-T hg38:Y:23738892-A-T | P1_Y1 | ** | |||||
| hg19:Y:25907938-G-T hg38:Y:23761791-G-T | P1_Y1 | ** | |||||
| hg19:Y:25942835-A-T hg38:Y:23796688-A-T | P1_Y1 | ** | |||||
| hg19:Y:25942837-G-T hg38:Y:23796690-G-T | P1_Y1 | ** | |||||
| hg19:Y:25942843-G-T hg38:Y:23796696-G-T | P1_Y1 | ** | |||||
| hg19:Y:25942850-A-T hg38:Y:23796703-A-T | P1_Y1 | ** | |||||
| hg19:Y:25942856-A-T hg38:Y:23796709-A-T | P1_Y1 | ** | |||||
| hg19:Y:26021446-A-T hg38:Y:23875299-A-T | P1_Y1 | ** | |||||
| hg19:Y:26021454-C-A hg38:Y:23875307-C-A | P1_Y1 | ** | |||||
| hg19:Y:27263166-T-G hg38:Y:25117019-T-G | P1_g3 | ** | |||||
| hg19:Y:27757834-T-A hg38:Y:25611687-T-A | P1_Y2 | ** | |||||
| hg19:Y:28468711-A-T hg38:Y:26322564-A-T | ** | ||||||
| hg19:Y:28506305-C-A hg38:Y:26360158-C-A | ** | ||||||
| hg19:Y:28514493-T-C hg38:Y:26368346-T-C | ** | ||||||
| hg19:Y:28549061-G-T hg38:Y:26402914-G-T | ** | ||||||
| hg19:Y:28549065-T-A hg38:Y:26402918-T-A | ** | ||||||
| hg19:Y:28567247-A-T hg38:Y:26421100-A-T | ** | ||||||
| hg19:Y:28610161-C-A hg38:Y:26464014-C-A | ** | ||||||
| hg19:Y:28655374-A-C hg38:Y:26509227-A-C | ** | ||||||
| hg19:Y:28657501-C-A hg38:Y:26511354-C-A | ** | ||||||
| hg19:Y:28715197-G-T hg38:Y:26569050-G-T | ** | ||||||
| hg19:Y:28715354-T-A hg38:Y:26569207-T-A | ** | ||||||
| hg19:Y:28715436-C-T hg38:Y:26569289-C-T | ** | ||||||
| hg19:Y:28728810-C-A hg38:Y:26582663-C-A | ** | ||||||
| hg19:Y:28763756-A-T hg38:Y:26617609-A-T | ** | ||||||
| hg19:Y:28780132-C-A hg38:Y:26633985-C-A | ** | ||||||
| hg19:Y:28812219-G-T hg38:Y:26666072-G-T | ** | ||||||
| hg19:Y:28812235-G-T hg38:Y:26666088-G-T | ** | ||||||
| hg38:Y:56749981-G-T | ** | ||||||
| hg38:Y:56827707-C-T | ** | ||||||
| hg38:Y:56838531-G-T | ** | ||||||
| hg38:Y:56838548-T-A | ** | ||||||
| hg38:Y:56839920-G-T | ** | ||||||
| hg38:Y:56887068-C-A | ** | ||||||
| hg19:Y:22511385-G-A hg38:Y:20349499-G-A | BY177541 | DYZ19 | *** | ||||
| hg38:Y:10769639-C-A | *** | ||||||
| hg38:Y:10769646-A-AT | *** | ||||||
| hg38:Y:10769649-CT-C | *** | ||||||
| hg19:Y:3991966-A-T hg38:Y:4123925-A-T | A16893 | *** | |||||
| hg38:Y:10821894-C-G | *** | ||||||
| hg19:Y:5335492-TA-T,TAA hg38:Y:5467451-TA-T,TAA | 11×A | *** | |||||
| hg19:Y:2763793-ACC-A,AACC hg38:Y:2895752-ACC-A,AACC | *** | ||||||
| hg19:Y:2854850-A-G hg38:Y:2986809-A-G | *** | ||||||
| hg19:Y:3345880-C-A hg38:Y:3477839-C-A | *** | ||||||
| hg19:Y:9158902-A-T hg38:Y:9321293-A-T | *** | ||||||
| hg19:Y:9169768-C-A hg38:Y:9332159-C-A | *** | ||||||
| hg19:Y:9375563-A-G hg38:Y:9537954-A-G | *** | ||||||
| hg19:Y:9978140-G-T hg38:Y:10140531-G-T | *** | ||||||
| hg38:Y:10796691-C-CGGTTTGAAGG | *** | ||||||
| hg19:Y:13474030-C-A hg38:Y:11318354-C-A | *** | ||||||
| hg19:Y:13932766-T-C hg38:Y:11812060-T-C | *** | ||||||
| hg19:Y:14059441-C-A hg38:Y:11938735-C-A | *** | ||||||
| hg19:Y:14704981-C-A hg38:Y:12593047-C-A | *** | ||||||
| hg19:Y:15076180-CTTT-C,CTT hg38:Y:12964270-CTTT-C,CTT | 16×T | *** | |||||
| hg19:Y:16889914-TATAAATAA-T,TATAA hg38:Y:14778034-TATAAATAA-T,TATAA | 11×ATAA | *** | |||||
| hg19:Y:17169828-G-T hg38:Y:15057948-G-T | *** | ||||||
| hg19:Y:18191921-G-T hg38:Y:16080041-G-T | *** | ||||||
| hg19:Y:18925041-C-A hg38:Y:16813161-C-A | *** | ||||||
| hg19:Y:19415265-C-A hg38:Y:17303385-C-A | *** | ||||||
| hg19:Y:21464599-A-G hg38:Y:19302713-A-G | *** | ||||||
| hg19:Y:22200860-C-A hg38:Y:20038974-C-A | *** | ||||||
| hg19:Y:22934287-GTT-G hg38:Y:20772401-GTT-G | 12×T | *** | |||||
| hg19:Y:22998836-C-A hg38:Y:20836950-C-A | *** | ||||||
| hg19:Y:23089599-T-C hg38:Y:20927713-T-C | *** | ||||||
| hg19:Y:23142650-G-A hg38:Y:20980764-G-A | *** | ||||||
| hg19:Y:23424189-T-C hg38:Y:21262303-T-C | *** | ||||||
| hg19:Y:23597409-T-C hg38:Y:21435523-T-C | *** | ||||||
| hg19:Y:27216712-C-A hg38:Y:25070565-C-A | P1_g3 | *** | |||||
| hg19:Y:28698236-C-A hg38:Y:26552089-C-A | *** | ||||||
| hg38:Y:56836181-C-A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.
Age Analysis Information (work in progress)
| All | McDonald | YFull | |
| Kit: 466618 | 9686445 | 7936127 | 7828473 |
| Used in age calculations | 9686445 | 7936127 | 7828473 |
| Counts of SNPs | 3 | 4 |
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