Tree Position

R-P312/S116 > Z290 > L21/S145 > DF13 > ZZ10 > Z253 > ZZ6 > FGC3249 > FGC3236 > BY39757

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRBigY2
266764
20752079-C-CT 18590193-C-CT P4_Prx 11×TA*
6284100-C-T 6416059-C-T BY12541 IR3_Dst A*
19668978-T-C 17557098-T-C BY13931 P5_Prx A*
15802053-T-G 13690173-T-G A21084 YY+
17988773-G-A 15876893-G-A P7_Prx Y+
7157346-TAACAAC-T 7289305-TAACAAC-T 10×AAC+
19243992-G-A 17132112-G-A A21085 YY+
21625934-CA-C 19464048-CA-C 10×A*
14926225-A-T 12814290-A-T **
14910785-T-G 12798852-T-G **
14909647-A-G 12797714-A-G **
14822311-C-A 12710378-C-A **
14799769-C-A 12687840-C-A **
14785484-A-C 12673554-A-C **
14970310-C-A 12858385-C-A **
14784739-TCTGC-T 12672809-TCTGC-T **
15073529-C-A 12961619-C-A **
15114825-C-T 13002912-C-T **
14764290-T-A 12652359-T-A **
14594264-T-G 12482464-T-G **
14722500-T-A 12610568-T-A **
14421982-C-A 12301257-C-A **
14272783-C-A 12152077-C-A **
14283344-C-A 12162638-C-A Y90927 **
14328809-C-A 12208103-C-A **
14348040-T-G 12227335-T-G **
14376222-T-C 12255518-T-C **
14404768-T-G 12284065-T-G **
14429377-T-G 12308652-T-G **
14701427-C-A 12589493-C-A **
14430590-C-A 12309863-C-A **
14485331-G-T 12364600-G-T **
14490953-A-T 12370222-A-T **
14490987-T-A 12370256-T-A **
14591808-T-A 12480008-T-A **
15222961-T-C 13111047-T-C **
15189682-G-A 13077768-G-A **
15270939-C-A 13159028-C-A **
15248874-C-A 13136960-C-A **
15790977-A-C 13679097-A-C **
16738059-A-T 14626179-A-T **
16706107-A-T 14594227-A-T **
16700166-T-A 14588286-T-A **
16618707-C-A 14506827-C-A **
16297394-T-A 14185514-T-A **
16232461-T-C 14120581-T-C **
16114259-TG-T 14002379-TG-T P8_Prx **
16052129-A-C 13940249-A-C **
16036325-T-A 13924445-T-A **
15985370-T-G 13873490-T-G **
15932182-T-A 13820302-T-A **
15909445-A-G 13797565-A-G **
15871647-C-A 13759767-C-A **
15842581-C-A 13730701-C-A **
15717687-G-C 13605807-G-C **
15260685-T-G 13148769-T-G **
15388427-A-C 13276547-A-C **
14208893-C-A 12088187-C-A **
15305702-C-T 13193801-C-T **
15320688-A-C 13208806-A-C **
15321219-A-T 13209337-A-T **
15324434-A-T 13212552-A-T **
15388065-C-A 13276185-C-A **
15394201-T-A 13282321-T-A **
15712342-A-T 13600462-A-T **
15412401-G-A 13300521-G-A **
15439835-C-A 13327955-C-A **
15497044-G-C 13385164-G-C **
15497047-A-T 13385167-A-T **
15498749-T-G 13386869-T-G **
15648628-C-A 13536748-C-A **
14219461-C-A 12098755-C-A **
20326007-C-CTT 18164121-C-CTT P5_Dst 29×T**
14052810-C-A 11932104-C-A **
10996643-C-T **
10996612-C-CCACT **
10996622-C-T **
10996623-G-A **
10996632-C-T **
10996635-C-T **
10996641-A-T **
10996650-C-T **
10993975-T-G **
10996653-T-C **
10996665-A-C **
11000187-G-T **
11014291-T-A **
11016383-A-T **
11016418-A-AGTC **
10996563-T-C **
10992314-AAATTC-A **
11023069-CT-C **
10959700-C-A **
10895870-C-G **
10895888-C-A **
10896146-C-A **
10924296-C-G **
10924322-C-T **
10924323-AT-A **
10961562-C-A **
10992275-C-G **
10961564-T-C **
10964394-ATCCAT-A **
10973903-C-T **
10973969-C-T **
10981353-C-A **
10988012-T-TCCACA **
11023066-C-CCAATCT **
11023075-TCCATGC-T **
16864983-GT-G 14753103-GT-G **
11677807-C-A **
13476211-C-A 11320535-C-A **
13587896-C-A 11432220-C-A **
13600690-C-A 11445014-C-A **
13734343-A-C 11578667-A-C BY26316 ALK93 **
11659914-A-C **
11669314-A-C **
13856739-A-G 11736033-A-G **
13468139-C-A 11312463-C-A **
13890702-A-C 11769996-A-C **
13893668-A-C 11772962-A-C **
13896256-G-C 11775550-G-C **
13919520-C-A 11798814-C-A **
14027150-C-A 11906444-C-A **
14038151-C-A 11917445-C-A **
13468172-C-A 11312496-C-A **
13454273-A-T 11298597-A-T **
11023084-TTTCA-T **
11034839-C-A **
11023102-C-A **
11023104-G-C **
11023118-A-T **
11023149-T-G **
11023156-C-T **
11033072-T-A **
11034857-TCCATGA-T **
13454260-T-C 11298584-T-C **
11034878-G-T **
13254422-T-G 11098746-T-G **
13275623-A-C 11119947-A-C **
13307132-A-T 11151456-A-T **
13454253-A-ACGC 11298577-A-ACGC **
13454254-TTCC-T 11298578-TTCC-T **
16783423-A-C 14671543-A-C **
17206508-T-G 15094628-T-G **
16921241-C-A 14809361-C-A **
22529772-G-A 20367886-G-A **
23729051-A-C 21567165-A-C **
23521000-C-A 21359114-C-A **
23495620-C-A 21333734-C-A **
23465867-C-A 21303981-C-A **
23081890-G-A 20920004-G-A **
23068169-A-G 20906283-A-G **
23010906-A-C 20849020-A-C **
22874325-C-A 20712439-C-A **
22869680-C-A 20707794-C-A **
22836884-C-A 20674998-C-A **
22786990-C-A 20625104-C-A **
22776856-T-G 20614970-T-G **
22652203-C-A 20490317-C-A **
22576402-T-A 20414516-T-A **
22446643-G-A 20284757-G-A DYZ19 **
23786341-C-A 21624455-C-A **
22167359-A-G 20005473-A-G **
22044091-C-A 19882205-C-A **
22078245-T-A 19916359-T-A **
22088758-T-C 19926872-T-C **
22143057-A-T 19981171-A-T **
22167342-C-G 20005456-C-G **
22167351-A-G 20005465-A-G **
22235535-A-C 20073649-A-C DYZ19 **
22325356-T-C 20163470-T-C DYZ19 **
22235542-T-A 20073656-T-A DYZ19 **
22235558-G-A 20073672-G-A DYZ19 **
22235565-A-AC 20073679-A-AC DYZ19 **
22235572-T-C 20073686-T-C DYZ19 **
22235572-TA-T 20073686-TA-T DYZ19 **
22322045-A-T 20160159-A-T DYZ19 **
23742167-C-T 21580281-C-T **
24267287-T-A 22121140-T-A P3_b1 **
21986421-A-C 19824535-A-C **
28483772-C-A 26337625-C-A **
56863526-C-T **
56857959-G-C **
56827547-CTTTCC-A **
56826784-T-A **
56825729-G-T **
56763510-T-C **
28816024-T-A 26669877-T-A **
28800852-A-C 26654705-A-C **
28689050-C-A 26542903-C-A **
28601058-C-A 26454911-C-A **
28587933-A-C 26441786-A-C **
28537655-C-A 26391508-C-A **
28517942-G-T 26371795-G-T **
28500746-T-G 26354599-T-G **
27958033-T-G 25811886-T-G P1_Y2 **
24445384-A-G 22299237-A-G **
26377819-C-A 24231672-C-A P1_Y1 **
24502361-C-A 22356214-C-A **
24503231-C-A 22357084-C-A **
24508310-T-A 22362163-T-A **
24511286-A-C 22365139-A-C **
24636131-G-T 22489984-G-T P3_t2 **
26345907-A-C 24199760-A-C P1_Y1 **
26565445-C-A 24419298-C-A P1_g2 **
27769195-G-T 25623048-G-T P1_Y2 **
27127909-A-C 24981762-A-C P1_g3 **
27467152-T-G 25321005-T-G P1_Y2 **
27546776-C-A 25400629-C-A P1_Y2 **
27633724-T-A 25487577-T-A P1_Y2 **
27633732-G-T 25487585-G-T P1_Y2 **
27769176-G-T 25623029-G-T P1_Y2 **
22028306-T-C 19866420-T-C **
21555673-G-T 19393787-G-T **
16952578-C-A 14840698-C-A **
18174479-C-A 16062599-C-A **
18949914-A-C 16838034-A-C **
18905374-C-T 16793494-C-T F23037 **
18891314-A-C 16779434-A-C **
18891258-G-A 16779378-G-A **
18708001-T-G 16596121-T-G **
18633674-C-A 16521794-C-A **
18442876-C-A 16330996-C-A P6_Dst **
18425173-C-T 16313293-C-T P6_Gap **
18423811-G-A 16311931-G-A P6_Gap **
18244466-C-A 16132586-C-A **
18243949-T-A 16132069-T-A **
18223871-C-A 16111991-C-A **
18201561-C-CAA 16089681-C-CAA 14×A**
18190622-C-A 16078742-C-A **
18045369-C-A 15933489-C-A **
19060039-C-A 16948159-C-A **
17413288-C-A 15301408-C-A **
17188327-C-A 15076447-C-A **
10880799-A-G **
17228849-C-A 15116969-C-A **
17278130-C-A 15166250-C-A **
17278240-C-CA 15166360-C-CA 10×A**
17376028-T-C 15264148-T-C **
17428090-A-G 15316210-A-G **
17981937-C-A 15870057-C-A **
17502517-C-A 15390637-C-A **
17580242-C-A 15468362-C-A **
17646770-C-A 15534890-C-A **
17802592-C-A 15690712-C-A **
17865341-C-A 15753461-C-A **
17871712-T-G 15759832-T-G **
18963995-A-C 16852115-A-C **
19106425-A-T 16994545-A-T **
21486412-C-A 19324526-C-A **
20778781-T-TTCTGTG 18616895-T-TTCTGTG P4_Prx 18×TG**
19698567-A-C 17586687-A-C P5_Prx **
20128397-A-C 18016517-A-C P5_Dst **
20469715-CAAA-C 18307829-CAAA-C P5_Dst **
20496942-C-G 18335056-C-G P5_Dst **
20579119-C-CAA 18417233-C-CAA P5_Dst **
20579139-T-A 18417253-T-A P5_Dst **
20778823-A-C 18616937-A-C P4_Prx **
19643243-T-A 17531363-T-A P5_Prx **
21148632-G-T 18986746-G-T **
21152531-C-G 18990645-C-G **
21345023-A-G 19183137-A-G **
21422053-T-C 19260167-T-C **
21438365-A-T 19276479-A-T **
21476645-C-A 19314759-C-A **
19643256-T-A 17531376-T-A P5_Prx **
19643229-T-A 17531349-T-A P5_Prx **
19106439-G-T 16994559-G-T **
19313671-A-G 17201791-A-G **
19127881-T-C 17016001-T-C **
19172671-T-G 17060791-T-G **
19183812-T-TA 17071932-T-TA **
19202912-A-C 17091032-A-C **
19226075-C-A 17114195-C-A **
19310119-A-G 17198239-A-G **
19338252-C-A 17226372-C-A **
19535512-C-G 17423632-C-G **
19369267-C-A 17257387-C-A **
19394182-C-G 17282302-C-G **
19416475-A-T 17304595-A-T **
19416478-A-T 17304598-A-T **
19509759-C-A 17397879-C-A **
19522601-C-A 17410721-C-A **
10881117-C-A **
10996645-C-T **
10876290-C-A **
2812766-G-T 2944725-G-T **
10985167-T-C **
2812768-C-A 2944727-C-A **
20579297-ACC-A 18417411-ACC-A P5_Dst **
10912192-A-C **
10859673-T-G **
10859661-A-ATTATC **
10859622-C-A **
22236318-G-A 20074432-G-A DYZ19 **
14319448-GATAT-G 12198742-GATAT-G 8×AT**
11001925-T-C **
11001918-C-T **
15412464-CA-C 13300584-CA-C 10×A**
10949945-C-A **
10667079-C-A **
10747956-G-A **
11013442-T-C **
11013436-C-G **
3112226-C-A 3244185-C-A **
27958080-AAAAC-A 25811933-AAAAC-A P1_Y2 **
10672891-C-A **
10989153-A-C **
17951325-G-T 15839445-G-T **
22820367-A-T 20658481-A-T **
10684053-C-G **
10693430-C-A **
10691369-T-TACAC **
14098733-T-TA 11978027-T-TA 10×A**
10896124-T-G **
10896109-T-G **
11001921-T-C **
10787302-CTCCAT-C **
22236320-T-C 20074434-T-C DYZ19 **
10776638-G-T **
2914906-C-A 3046865-C-A **
2862766-T-A 2994725-T-A **
2773528-A-C 2905487-A-C **
2773515-G-T 2905474-G-T **
2773376-T-A 2905335-T-A **
2762725-A-T 2894684-A-T **
2741300-T-C 2873259-T-C **
2651900-T-G 2783859-T-G **
21091054-C-CAA 18929168-C-CAA 16×A**
10861233-T-G **
16760174-C-A 14648294-C-A **
5110127-TA-T 5242086-TA-T 12×A**
8214097-C-A 8346056-C-A **
18150565-C-A 16038685-C-A **
16786200-C-A 14674320-C-A **
11022907-C-A **
10896156-A-C **
10896152-T-A **
10876188-T-A **
10912646-G-A **
10912644-T-G **
10912643-T-C **
10912632-A-T **
28816018-A-C 26669871-A-C **
6651274-T-G 6783233-T-G **
10895897-ACTCAG-A **
18547340-TAA-T 16435460-TAA-T 12×A**
10685759-T-C **
17381341-C-A 15269461-C-A **
10663799-T-C **
27963482-A-AG 25817335-A-AG P1_Y2 **
10747955-T-A **
3343849-C-A 3475808-C-A **
15015255-CTTTTTT-C 12903343-CTTTTTTT-C 24×T**
16036262-C-CT 13924382-C-CT 11×T**
10754965-TC-GG **
21148620-G-AT 18986734-G-AT **
10785295-T-A **
7107084-ATTT-A 7239043-ATTT-A 14×T**
15394196-G-C 13282316-G-C **
58976408-T-C 56830261-T-C **
58976451-A-G 56830304-A-G **
18933183-C-A 16821303-C-A FGC52296 **
28517963-CA-C 26371816-CA-C 11×A**
22236296-G-A 20074410-G-A DYZ19 **
16345147-T-C 14233267-T-C **
16345144-T-C 14233264-T-C **
22235541-C-A 20073655-C-A DYZ19 **
10658285-A-C **
22167352-C-T 20005466-C-T Y57710 **
59026601-C-T 56880454-C-T **
59004088-G-A 56857941-G-A **
22236271-G-T 20074385-G-T DYZ19 **
22236270-A-T 20074384-A-T DYZ19 **
22236302-A-G 20074416-A-G DYZ19 **
15492683-G-GA 13380803-G-GA 10×A**
22236264-G-T 20074378-G-T DYZ19 **
3195276-T-C 3327235-T-C **
18043083-TA-T 15931203-TA-T 10×A**
14639064-C-CT 12527133-C-CT 18×T**
13835212-C-A 11714506-C-A **
21148628-G-A 18986742-G-A **
13887941-A-G 11767235-A-G **
10658282-G-T **
10658287-A-C **
10912271-A-T **
10831592-A-T **
7311522-A-T 7443481-A-T **
13872234-C-A 11751528-C-A **
15156990-C-A 13045077-C-A **
10912220-C-A **
10750949-C-A **
10992356-A-C **
11027364-T-TCCA **
11027363-C-T **
11027356-A-T **
10663817-C-A **
10673655-G-T **
10845696-C-G **
10845650-C-A **
18346573-C-A 16234693-C-A P6_Prx **
13981630-G-T 11860924-G-T **
10658288-A-C **
10754948-A-ACTAAACTC **
10658295-C-G **
10973874-C-A **
10973868-CAGTT-C **
10973865-T-A **
10973861-C-T **
10973854-C-A **
10792413-A-T **
10792404-T-C **
10792397-C-T **
15070614-CAAA-C 12958705-CAAA-C 20×A**
10964224-T-C **
10984410-T-A **
10658292-C-T **
2928365-A-T 3060324-A-T **
10912227-T-A **
3389108-T-A 3521067-T-A **
9524231-CTA-C 9686622-CTA-C **
8713811-T-A 8845770-T-A **
8826479-C-A 8958438-C-A **
8977711-A-C 9140102-A-C **
9029894-C-A 9192285-C-A **
9454081-C-A 9616472-C-A **
9460918-C-A 9623309-C-A **
9820474-T-G 9982865-T-G **
8216640-C-A 8348599-C-A **
9958882-A-T 10121273-A-T **
9958883-A-T 10121274-A-T **
9958885-A-T 10121276-A-T **
9958899-A-T 10121290-A-T **
9958906-A-T 10121297-A-T **
9980668-C-A 10143059-C-A **
8268883-T-G 8400842-T-G **
8171718-T-G 8303677-T-G **
10652942-T-G **
7423886-C-A 7555845-C-A **
7279567-A-C 7411526-A-C **
7311523-C-A 7443482-C-A **
7313005-C-A 7444964-C-A **
7318964-C-A 7450923-C-A **
7359306-C-A 7491265-C-A **
7412542-T-A 7544501-T-A **
7424070-C-CA 7556029-C-CA **
8171149-C-A 8303108-C-A **
7784859-A-G 7916818-A-G **
8012580-C-A 8144539-C-A **
8052702-C-A 8184661-C-A **
8139885-T-A 8271844-T-A **
8139891-T-A 8271850-T-A **
8163009-C-A 8294968-C-A **
10652665-T-G **
10652951-A-T **
7240156-C-A 7372115-C-A **
10826780-GTTCCA-G **
10805301-G-T **
10809638-C-CA **
10810645-C-A **
10821801-C-A **
10822041-G-A **
10822599-A-T **
10828474-C-A **
10804813-T-G **
10828955-T-G **
10841939-C-A **
10856715-T-C **
10859637-C-A **
10860676-C-A **
10865978-C-A **
10804818-T-G **
10804808-T-G **
10658222-A-C **
10760232-C-A **
10661261-G-A **
10685739-C-T **
10685749-G-C **
10685781-C-T **
10693199-C-A **
10754200-A-T **
10761884-C-A **
10796567-T-A **
10773553-T-G **
10773562-C-A **
10776107-C-G **
10776159-G-A **
10782883-CTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCAT-C **
10783593-C-A **
10785264-ATTC-A **
7270276-CTTTTTTT-C 7402235-CTTTTTTT-C 25×T**
56867808-T-C **
7208242-C-A 7340201-C-A **
6798713-G-T 6930672-G-T **
7099306-C-A 7231265-C-A **
4703174-T-A 4835133-T-A **
5599929-C-A 5731888-C-A **
7009187-C-CTTT 7141146-C-CTTT 19×T**
5532894-C-A 5664853-C-A **
5528822-C-A 5660781-C-A **
4554462-T-C 4686421-T-C **
7112527-G-T 7244486-G-T **
6425697-A-T 6557656-A-T **
6445073-A-T 6577032-A-T **
5527127-A-G 5659086-A-G **
5446392-C-A 5578351-C-A **
6577027-C-A 6708986-C-A **
5141303-G-T 5273262-G-T **
4438014-G-C 4569973-G-C **
6229403-A-C 6361362-A-C IR3_Dst **
4237504-T-A 4369463-T-A **
5863971-G-A 5995930-G-A **
7158059-T-A 7290018-T-A **
7160412-T-G 7292371-T-G **
7201399-C-A 7333358-C-A **
3602850-G-C 3734809-G-C **
6000061-C-A 6132020-C-A **
4062754-A-C 4194713-A-C **
5871911-A-T 6003870-A-T **
4237473-G-C 4369432-G-C **
5621397-C-A 5753356-C-A **
4229910-T-G 4361869-T-G **
16631462-AT-A,ATT 14519582-AT-A,ATT 14×T***
16668162-G-T 14556282-G-T ***
56826901-C-T ***
23597497-C-A 21435611-C-A ***
23209052-C-A 21047166-C-A ***
16764559-T-C 14652679-T-C ***
23439734-CT-C 21277848-CT-C 9×T***
16768601-CTTT-C,CT 14656721-CTTT-C,CT 17×T***
22768365-AT-A,AAT 20606479-AT-A,AAT ***
16862301-C-A 14750421-C-A ***
7567753-CTTT-C 7699712-CTTT-C 25×T***
5459425-C-A 5591384-C-A ***
16931759-G-A 14819879-G-A ***
23981983-G-A 21835836-G-A ***
10789574-C-A ***
24445374-T-G 22299227-T-G ***
2663777-A-G 2795736-A-G ***
3831262-T-C 3963221-T-C ***
22487426-G-C 20325540-G-C DYZ19 ***
2835539-CAA-C 2967498-CAA-C 12×A***
7648572-TA-T 7780531-TA-T 10×A***
28809618-T-A 26663471-T-A ***
8631875-C-CA 8763834-C-CA BY3257 10×A***
10839911-G-A,C ***
13441728-C-A 11286052-C-A ***
17678621-CTTTTT-C 15566741-CTTTTT-C 26×T***
28492167-T-TA 26346020-T-TA 8×A***
16040033-C-A 13928153-C-A ***
4521612-TAAA-T,TAA 4653571-TAAA-T,TAA 17×A***
10969522-C-A ***
16185939-CATACCTAACATTTTTTGTGA-C 14074059-CATACCTAACATTTTTTGTGA-C ***
24445376-G-A 22299229-G-A ***
9854343-CTTTTTTTT-C 10016734-CTTTTTTTT-C 19×T***
15382957-C-A 13271077-C-A ***
16340190-T-A 14228310-T-A ***
16481731-ATTT-A 14369851-ATTT-A 18×T***
16530502-C-A 14418622-C-A ***
13319489-CAGAG-C 11163813-CAGAG-C 8×AG***
16590953-CT-C,CTT 14479073-CT-C,CTT 11×T***
10677465-C-A ***
10785306-T-G ***
10785270-T-TCAA ***
17459485-CAAAAAAAA-C 15347605-CAAAAAAAA-C 25×A***
17799260-C-A 15687380-C-A BY30417BY30426 ***
24445383-C-T 22299236-C-T ***
22647489-C-A 20485603-C-A ***
15057738-ATTTTT-A 12945830-ATTTTT-A 18×T***
22538537-G-T 20376651-G-T ***
19395076-C-A 17283196-C-A ***
11643714-G-C ***
11643722-T-TAAACC ***
14806207-C-A 12694278-C-A ***
15662681-T-C 13550801-T-C ***
18052568-ATT-A,ATTTT 15940688-ATT-A,ATTTT 16×T***
18085314-C-A 15973434-C-A ***
6757366-G-T 6889325-G-T ***
8101804-C-A 8233763-C-A ***
8088173-CAAA-C,CAA 8220132-CAAA-C,CAA 16×A***
10748036-C-G ***
8001754-C-T 8133713-C-T A14156 Z45558 ***
7976561-G-T 8108520-G-T ***
18256041-G-T 16144161-G-T ***
6703708-C-A 6835667-C-A ***
14327932-C-CT 12207226-C-CT 8×T***
19294117-C-A 17182237-C-A ***
15484439-C-A 13372559-C-A ***
10985048-T-G ***
14566914-A-G 12455114-A-G ***
18706981-G-A 16595101-G-A ***
16679099-ATT-A,AT 14567219-ATT-A,AT 25×T***
19107045-A-G 16995165-A-G ***
2840099-CAAAAAA-C 2972058-CAAAAAA-C 20×A***
10807284-T-A ***
14528531-C-A 12416732-C-A ***
18832757-TAAA-T 16720877-TAAA-T 12×A***
14449582-C-A 12328855-C-A ***
18034724-C-T 15922844-C-T ***
21087399-CAAAA-C 18925513-CAAAA-C 14×A***
16960448-C-A 14848568-C-A ***
22023684-GTT-G,GT 19861798-GTT-G,GT 17×T***
17094838-C-A 14982958-C-A ***
7241663-G-T 7373622-G-T ***
17289193-AT-A 15177313-AT-A ***
15000979-C-A 12889064-C-A ***
17395552-C-A 15283672-C-A ***
14938274-A-G 12826349-A-G ***
9765752-G-A 9928143-G-A ***
22165498-C-A 20003612-C-A ***
22159368-C-A 19997482-C-A ***
13321622-T-C 11165946-T-C ***
11643780-A-T ***
15402253-C-A 13290373-C-A ***
9443734-AAAG-A 9606125-AAAG-A ***
21095229-C-A 18933343-C-A ***
21814078-C-A 19652192-C-A ***
21572450-C-A 19410564-C-A ***
21510199-CT-C,CTTT 19348313-CT-C,CTTT 13×T***
21503994-ATTTT-A,ATTT 19342108-ATTTT-A,ATTT 19×T***
6768885-CTTT-C,CTT 6900844-CTTT-C,CTT 17×T***
14867029-C-A 12755099-C-A ***
8054663-C-A 8186622-C-A ***
13510993-C-A 11355317-C-A ***
13468227-C-T 11312551-C-T ***
21172497-C-A 19010611-C-A ***
21169065-C-A 19007179-C-A ***
8563745-CTTT-C 8695704-CTTT-C 21×T***
8652786-C-A 8784745-C-A ***
15677505-CAA-C,CA 13565625-CAA-C,CA 16×A***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.

Age Analysis Information (work in progress)

AllMcDonaldYFull
Kit: 266764887219073004877235702
Used in age calculations887219073004877235702
Counts of SNPs32
Variant counts last updated 2018-05-16 18:02:12.



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