Prescott
BigY2: 266764MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 266764 |
---|---|---|---|---|---|---|---|---|
6284100-C-T | 6416059-C-T | BY12541 | IR3_Dst | A* | ||||
7157346-TAACAAC-T | 7289305-TAACAAC-T | 10×AAC | + | |||||
17988773-G-A | 15876893-G-A | BY119031 | P7_Prx | Y | + | |||
19243992-G-A | 17132112-G-A | A21085 | Y | Y | + | |||
21148628-G-A | 18986742-G-A | ** | ||||||
13835212-C-A | 11714506-C-A | ** | ||||||
15492683-G-GA | 13380803-G-GA | 10×A | ** | |||||
22167352-C-T | 20005466-C-T | Y57710 | ** | |||||
22235541-C-A | 20073655-C-A | BY174683 | DYZ19 | ** | ||||
15015255-CTTTTTT-C | 12903343-CTTTTTTT-C | 24×T | ** | |||||
16345144-T-C | 14233264-T-C | ** | ||||||
16345147-T-C | 14233267-T-C | FT346941 | ** | |||||
18933183-C-A | 16821303-C-A | BY53638 | FGC52296 | ** | ||||
58976451-A-G | 56830304-A-G | ** | ||||||
58976408-T-C | 56830261-T-C | ** | ||||||
15394196-G-C | 13282316-G-C | ** | ||||||
7107084-ATTT-A | 7239043-ATTT-A | 14×T | ** | |||||
21148620-G-AT | 18986734-G-AT | ** | ||||||
10754965-TC-GG | ** | |||||||
10658282-G-T | ** | |||||||
10658285-A-C | ** | |||||||
10658287-A-C | ** | |||||||
10658292-C-T | ** | |||||||
10984410-T-A | ** | |||||||
10964224-T-C | ** | |||||||
10973854-C-A | ** | |||||||
10973861-C-T | ** | |||||||
10973865-T-A | ** | |||||||
10973868-CAGTT-C | ** | |||||||
10973874-C-A | ** | |||||||
13981630-G-T | 11860924-G-T | ** | ||||||
10831592-A-T | ** | |||||||
10673655-G-T | ** | |||||||
10663817-C-A | ** | |||||||
11027356-A-T | ** | |||||||
11027363-C-T | ** | |||||||
11027364-T-TCCA | ** | |||||||
10992356-A-C | ** | |||||||
10750949-C-A | ** | |||||||
15156990-C-A | 13045077-C-A | ** | ||||||
13872234-C-A | 11751528-C-A | ** | ||||||
7311522-A-T | 7443481-A-T | ** | ||||||
10747955-T-A | ** | |||||||
27963482-A-AG | 25817335-A-AG | P1_Y2 | ** | |||||
10693430-C-A | ** | |||||||
10684053-C-G | ** | |||||||
22820367-A-T | 20658481-A-T | ** | ||||||
17951325-G-T | 15839445-G-T | ** | ||||||
10989153-A-C | ** | |||||||
10672891-C-A | ** | |||||||
3112226-C-A | 3244185-C-A | ** | ||||||
10667079-C-A | ** | |||||||
2812766-G-T | 2944725-G-T | ** | ||||||
15412464-CA-C | 13300584-CA-C | 10×A | ** | |||||
14319448-GATAT-G | 12198742-GATAT-G | 8×AT | ** | |||||
22236318-G-A | 20074432-G-A | DYZ19 | ** | |||||
10859622-C-A | ** | |||||||
10859661-A-ATTATC | ** | |||||||
10859673-T-G | ** | |||||||
2812768-C-A | 2944727-C-A | ** | ||||||
10985167-T-C | ** | |||||||
10747956-G-A | ** | |||||||
10787302-CTCCAT-C | ** | |||||||
10663799-T-C | ** | |||||||
17381341-C-A | 15269461-C-A | ** | ||||||
6651274-T-G | 6783233-T-G | ** | ||||||
28816018-A-C | 26669871-A-C | ** | ||||||
10896152-T-A | ** | |||||||
10896156-A-C | ** | |||||||
16786200-C-A | 14674320-C-A | ** | ||||||
10776638-G-T | ** | |||||||
18150565-C-A | 16038685-C-A | ** | ||||||
8214097-C-A | 8346056-C-A | ** | ||||||
16760174-C-A | 14648294-C-A | ** | ||||||
21091054-C-CAA | 18929168-C-CAA | 16×A | ** | |||||
2651900-T-G | 2783859-T-G | ** | ||||||
2741300-T-C | 2873259-T-C | ** | ||||||
2762725-A-T | 2894684-A-T | ** | ||||||
2773376-T-A | 2905335-T-A | ** | ||||||
2773515-G-T | 2905474-G-T | ** | ||||||
2773528-A-C | 2905487-A-C | ** | ||||||
2862766-T-A | 2994725-T-A | ** | ||||||
2914906-C-A | 3046865-C-A | ** | ||||||
2928365-A-T | 3060324-A-T | ** | ||||||
3343849-C-A | 3475808-C-A | ** | ||||||
3389108-T-A | 3521067-T-A | ** | ||||||
3602850-G-C | 3734809-G-C | ** | ||||||
4062754-A-C | 4194713-A-C | ** | ||||||
4229910-T-G | 4361869-T-G | ** | ||||||
4237473-G-C | 4369432-G-C | ** | ||||||
4237504-T-A | 4369463-T-A | ** | ||||||
4438014-G-C | 4569973-G-C | ** | ||||||
4554462-T-C | 4686421-T-C | ** | ||||||
4703174-T-A | 4835133-T-A | ** | ||||||
5141303-G-T | 5273262-G-T | ** | ||||||
5527127-A-G | 5659086-A-G | ** | ||||||
5528822-C-A | 5660781-C-A | ** | ||||||
5532894-C-A | 5664853-C-A | ** | ||||||
5599929-C-A | 5731888-C-A | ** | ||||||
5621397-C-A | 5753356-C-A | ** | ||||||
5871911-A-T | 6003870-A-T | ** | ||||||
6000061-C-A | 6132020-C-A | ** | ||||||
6229403-A-C | 6361362-A-C | IR3_Dst | ** | |||||
6425697-A-T | 6557656-A-T | ** | ||||||
6445073-A-T | 6577032-A-T | ** | ||||||
6577027-C-A | 6708986-C-A | ** | ||||||
6798713-G-T | 6930672-G-T | ** | ||||||
7009187-C-CTTT | 7141146-C-CTTT | 19×T | ** | |||||
7099306-C-A | 7231265-C-A | ** | ||||||
7112527-G-T | 7244486-G-T | ** | ||||||
7158059-T-A | 7290018-T-A | ** | ||||||
7160412-T-G | 7292371-T-G | ** | ||||||
7201399-C-A | 7333358-C-A | ** | ||||||
7208242-C-A | 7340201-C-A | ** | ||||||
7240156-C-A | 7372115-C-A | ** | ||||||
7270276-CTTTTTTT-C | 7402235-CTTTTTTT-C | 25×T | ** | |||||
7279567-A-C | 7411526-A-C | ** | ||||||
7311523-C-A | 7443482-C-A | ** | ||||||
7313005-C-A | 7444964-C-A | ** | ||||||
7318964-C-A | 7450923-C-A | ** | ||||||
7359306-C-A | 7491265-C-A | ** | ||||||
7412542-T-A | 7544501-T-A | ** | ||||||
7423886-C-A | 7555845-C-A | ** | ||||||
7424070-C-CA | 7556029-C-CA | ** | ||||||
7784859-A-G | 7916818-A-G | ** | ||||||
8012580-C-A | 8144539-C-A | ** | ||||||
8052702-C-A | 8184661-C-A | ** | ||||||
8139885-T-A | 8271844-T-A | ** | ||||||
8139891-T-A | 8271850-T-A | ** | ||||||
8163009-C-A | 8294968-C-A | ** | ||||||
8171149-C-A | 8303108-C-A | ** | ||||||
8171718-T-G | 8303677-T-G | ** | ||||||
8216640-C-A | 8348599-C-A | ** | ||||||
8268883-T-G | 8400842-T-G | ** | ||||||
8713811-T-A | 8845770-T-A | ** | ||||||
8826479-C-A | 8958438-C-A | ** | ||||||
8977711-A-C | 9140102-A-C | ** | ||||||
9029894-C-A | 9192285-C-A | ** | ||||||
9454081-C-A | 9616472-C-A | ** | ||||||
9460918-C-A | 9623309-C-A | ** | ||||||
9524231-CTA-C | 9686622-CTA-C | ** | ||||||
9820474-T-G | 9982865-T-G | ** | ||||||
9958882-A-T | 10121273-A-T | ** | ||||||
9958883-A-T | 10121274-A-T | ** | ||||||
9958885-A-T | 10121276-A-T | ** | ||||||
9958899-A-T | 10121290-A-T | ** | ||||||
9958906-A-T | 10121297-A-T | ** | ||||||
9980668-C-A | 10143059-C-A | ** | ||||||
10652665-T-G | ** | |||||||
10652942-T-G | ** | |||||||
10652951-A-T | ** | |||||||
10658222-A-C | ** | |||||||
10685739-C-T | FT429027 | ** | ||||||
10685749-G-C | ** | |||||||
10693199-C-A | ** | |||||||
10754200-A-T | ** | |||||||
10760232-C-A | ** | |||||||
10761884-C-A | ** | |||||||
10773553-T-G | ** | |||||||
10773562-C-A | ** | |||||||
10776107-C-G | ** | |||||||
10776159-G-A | ** | |||||||
10783593-C-A | ** | |||||||
10785264-ATTC-A | ** | |||||||
10796567-T-A | ** | |||||||
10805301-G-T | ** | |||||||
10809638-C-CA | ** | |||||||
10810645-C-A | ** | |||||||
10821801-C-A | ** | |||||||
10822041-G-A | 8534121-G-T | FT94224 | ** | |||||
10822599-A-T | ** | |||||||
10828474-C-A | ** | |||||||
10828955-T-G | ** | |||||||
10841939-C-A | ** | |||||||
10856715-T-C | ** | |||||||
10859637-C-A | ** | |||||||
10860676-C-A | ** | |||||||
10865978-C-A | ** | |||||||
10876188-T-A | ** | |||||||
10876290-C-A | ** | |||||||
10880799-A-G | ** | |||||||
10881117-C-A | ** | |||||||
10895870-C-G | ** | |||||||
10895888-C-A | ** | |||||||
10896146-C-A | ** | |||||||
10924296-C-G | ** | |||||||
10924322-C-T | ** | |||||||
10924323-AT-A | ** | |||||||
10959700-C-A | ** | |||||||
10961562-C-A | ** | |||||||
10961564-T-C | ** | |||||||
10964394-ATCCAT-A | ** | |||||||
10973903-C-T | ** | |||||||
10973969-C-T | ** | |||||||
10981353-C-A | ** | |||||||
10988012-T-TCCACA | ** | |||||||
10992275-C-G | ** | |||||||
10992314-AAATTC-A | ** | |||||||
10993975-T-G | ** | |||||||
10996563-T-C | ** | |||||||
10996612-C-CCACT | ** | |||||||
10996622-C-T | ** | |||||||
10996623-G-A | ** | |||||||
10996632-C-T | ** | |||||||
10996635-C-T | ** | |||||||
10996641-A-T | ** | |||||||
10996643-C-T | ** | |||||||
10996645-C-T | ** | |||||||
10996650-C-T | ** | |||||||
10996653-T-C | ** | |||||||
10996665-A-C | ** | |||||||
11000187-G-T | ** | |||||||
11014291-T-A | ** | |||||||
11016383-A-T | ** | |||||||
11016418-A-AGTC | ** | |||||||
11023066-C-CCAATCT | ** | |||||||
11023069-CT-C | ** | |||||||
11023075-TCCATGC-T | ** | |||||||
11023084-TTTCA-T | ** | |||||||
11023102-C-A | ** | |||||||
11023104-G-C | ** | |||||||
11023118-A-T | ** | |||||||
11023149-T-G | ** | |||||||
11023156-C-T | ** | |||||||
11033072-T-A | ** | |||||||
11034839-C-A | ** | |||||||
11034857-TCCATGA-T | ** | |||||||
11034878-G-T | ** | |||||||
13254422-T-G | 11098746-T-G | ** | ||||||
13275623-A-C | 11119947-A-C | ** | ||||||
13307132-A-T | 11151456-A-T | ** | ||||||
13454253-A-ACGC | 11298577-A-ACGC | ** | ||||||
13454254-TTCC-T | 11298578-TTCC-T | ** | ||||||
13454260-T-C | 11298584-T-C | ** | ||||||
13454273-A-T | 11298597-A-T | ** | ||||||
13468139-C-A | 11312463-C-A | ** | ||||||
13476211-C-A | 11320535-C-A | ** | ||||||
13587896-C-A | 11432220-C-A | ** | ||||||
13600690-C-A | 11445014-C-A | ** | ||||||
11659914-A-C | ** | |||||||
11669314-A-C | ** | |||||||
11677807-C-A | ** | |||||||
13856739-A-G | 11736033-A-G | ** | ||||||
13890702-A-C | 11769996-A-C | ** | ||||||
13893668-A-C | 11772962-A-C | ** | ||||||
13896256-G-C | 11775550-G-C | ** | ||||||
13919520-C-A | 11798814-C-A | ** | ||||||
14027150-C-A | 11906444-C-A | ** | ||||||
14038151-C-A | 11917445-C-A | ** | ||||||
14052810-C-A | 11932104-C-A | ** | ||||||
14208893-C-A | 12088187-C-A | ** | ||||||
14219461-C-A | 12098755-C-A | ** | ||||||
14272783-C-A | 12152077-C-A | ** | ||||||
14283344-C-A | 12162638-C-A | Y90927 | ** | |||||
14328809-C-A | 12208103-C-A | ** | ||||||
14348040-T-G | 12227335-T-G | ** | ||||||
14376222-T-C | 12255518-T-C | ** | ||||||
14404768-T-G | 12284065-T-G | ** | ||||||
14421982-C-A | 12301257-C-A | ** | ||||||
14429377-T-G | 12308652-T-G | ** | ||||||
14430590-C-A | 12309863-C-A | ** | ||||||
14485331-G-T | 12364600-G-T | ** | ||||||
14490953-A-T | 12370222-A-T | ** | ||||||
14490987-T-A | 12370256-T-A | ** | ||||||
14591808-T-A | 12480008-T-A | ** | ||||||
14594264-T-G | 12482464-T-G | ** | ||||||
14701427-C-A | 12589493-C-A | ** | ||||||
14722500-T-A | 12610568-T-A | ** | ||||||
14764290-T-A | 12652359-T-A | ** | ||||||
14784739-TCTGC-T | 12672809-TCTGC-T | ** | ||||||
14785484-A-C | 12673554-A-C | ** | ||||||
14799769-C-A | 12687840-C-A | ** | ||||||
14822311-C-A | 12710378-C-A | ** | ||||||
14909647-A-G | 12797714-A-G | ** | ||||||
14910785-T-G | 12798852-T-G | ** | ||||||
14926225-A-T | 12814290-A-T | ** | ||||||
14970310-C-A | 12858385-C-A | FT224251 | ** | |||||
15073529-C-A | 12961619-C-A | ** | ||||||
15114825-C-T | 13002912-C-T | ** | ||||||
15189682-G-A | 13077768-G-A | ** | ||||||
15222961-T-C | 13111047-T-C | ** | ||||||
15248874-C-A | 13136960-C-A | ** | ||||||
15260685-T-G | 13148769-T-G | ** | ||||||
15270939-C-A | 13159028-C-A | ** | ||||||
15305702-C-T | 13193801-C-T | ** | ||||||
15320688-A-C | 13208806-A-C | ** | ||||||
15321219-A-T | 13209337-A-T | ** | ||||||
15324434-A-T | 13212552-A-T | ** | ||||||
15388065-C-A | 13276185-C-A | ** | ||||||
15388427-A-C | 13276547-A-C | ** | ||||||
15394201-T-A | 13282321-T-A | ** | ||||||
15412401-G-A | 13300521-G-A | ** | ||||||
15439835-C-A | 13327955-C-A | ** | ||||||
15497044-G-C | 13385164-G-C | ** | ||||||
15497047-A-T | 13385167-A-T | ** | ||||||
15498749-T-G | 13386869-T-G | ** | ||||||
15648628-C-A | 13536748-C-A | ** | ||||||
15712342-A-T | 13600462-A-T | ** | ||||||
15717687-G-C | 13605807-G-C | ** | ||||||
15790977-A-C | 13679097-A-C | ** | ||||||
15842581-C-A | 13730701-C-A | ** | ||||||
15871647-C-A | 13759767-C-A | ** | ||||||
15909445-A-G | 13797565-A-G | ** | ||||||
15932182-T-A | 13820302-T-A | ** | ||||||
15985370-T-G | 13873490-T-G | ** | ||||||
16036325-T-A | 13924445-T-A | ** | ||||||
16052129-A-C | 13940249-A-C | ** | ||||||
16114259-TG-T | 14002379-TG-T | P8_Prx | ** | |||||
16232461-T-C | 14120581-T-C | ** | ||||||
16297394-T-A | 14185514-T-A | ** | ||||||
16618707-C-A | 14506827-C-A | ** | ||||||
16700166-T-A | 14588286-T-A | ** | ||||||
16706107-A-T | 14594227-A-T | ** | ||||||
16738059-A-T | 14626179-A-T | ** | ||||||
16783423-A-C | 14671543-A-C | ** | ||||||
16864983-GT-G | 14753103-GT-G | ** | ||||||
16921241-C-A | 14809361-C-A | ** | ||||||
16952578-C-A | 14840698-C-A | ** | ||||||
17188327-C-A | 15076447-C-A | ** | ||||||
17206508-T-G | 15094628-T-G | ** | ||||||
17228849-C-A | 15116969-C-A | ** | ||||||
17278130-C-A | 15166250-C-A | ** | ||||||
17376028-T-C | 15264148-T-C | ** | ||||||
17413288-C-A | 15301408-C-A | ** | ||||||
17428090-A-G | 15316210-A-G | ** | ||||||
17502517-C-A | 15390637-C-A | ** | ||||||
17580242-C-A | 15468362-C-A | ** | ||||||
17646770-C-A | 15534890-C-A | ** | ||||||
17802592-C-A | 15690712-C-A | ** | ||||||
17865341-C-A | 15753461-C-A | ** | ||||||
17871712-T-G | 15759832-T-G | ** | ||||||
17981937-C-A | 15870057-C-A | ** | ||||||
18045369-C-A | 15933489-C-A | ** | ||||||
18174479-C-A | 16062599-C-A | ** | ||||||
18190622-C-A | 16078742-C-A | ** | ||||||
18201561-C-CAA | 16089681-C-CAA | 14×A | ** | |||||
18223871-C-A | 16111991-C-A | ** | ||||||
18243949-T-A | 16132069-T-A | ** | ||||||
18244466-C-A | 16132586-C-A | ** | ||||||
18423811-G-A | 16311931-G-A | P6_Gap | ** | |||||
18425173-C-T | 16313293-C-T | P6_Gap | ** | |||||
18442876-C-A | 16330996-C-A | P6_Dst | ** | |||||
18633674-C-A | 16521794-C-A | ** | ||||||
18708001-T-G | 16596121-T-G | ** | ||||||
18891258-G-A | 16779378-G-A | ** | ||||||
18891314-A-C | 16779434-A-C | ** | ||||||
18905374-C-T | 16793494-C-T | F23037 | ** | |||||
18949914-A-C | 16838034-A-C | ** | ||||||
18963995-A-C | 16852115-A-C | ** | ||||||
19060039-C-A | 16948159-C-A | ** | ||||||
19106425-A-T | 16994545-A-T | ** | ||||||
19106439-G-T | 16994559-G-T | ** | ||||||
19127881-T-C | 17016001-T-C | ** | ||||||
19172671-T-G | 17060791-T-G | ** | ||||||
19183812-T-TA | 17071932-T-TA | ** | ||||||
19202912-A-C | 17091032-A-C | ** | ||||||
19226075-C-A | 17114195-C-A | ** | ||||||
19310119-A-G | 17198239-A-G | FT257475 | ** | |||||
19313671-A-G | 17201791-A-G | ** | ||||||
19338252-C-A | 17226372-C-A | ** | ||||||
19369267-C-A | 17257387-C-A | ** | ||||||
19394182-C-G | 17282302-C-G | ** | ||||||
19416475-A-T | 17304595-A-T | ** | ||||||
19416478-A-T | 17304598-A-T | ** | ||||||
19509759-C-A | 17397879-C-A | ** | ||||||
19522601-C-A | 17410721-C-A | ** | ||||||
19535512-C-G | 17423632-C-G | ** | ||||||
19643229-T-A | 17531349-T-A | P5_Prx | ** | |||||
19643243-T-A | 17531363-T-A | P5_Prx | ** | |||||
19643256-T-A | 17531376-T-A | P5_Prx | ** | |||||
19698567-A-C | 17586687-A-C | P5_Prx | ** | |||||
20128397-A-C | 18016517-A-C | P5_Dst | ** | |||||
20469715-CAAA-C | 18307829-CAAA-C | P5_Dst | ** | |||||
20496942-C-G | 18335056-C-G | P5_Dst | ** | |||||
20579119-C-CAA | 18417233-C-CAA | P5_Dst | ** | |||||
20579139-T-A | 18417253-T-A | P5_Dst | ** | |||||
20778781-T-TTCTGTG | 18616895-T-TTCTGTG | P4_Prx | 18×TG | ** | ||||
20778823-A-C | 18616937-A-C | P4_Prx | ** | |||||
21148632-G-T | 18986746-G-T | ** | ||||||
21152531-C-G | 18990645-C-G | ** | ||||||
21345023-A-G | 19183137-A-G | ** | ||||||
21422053-T-C | 19260167-T-C | ** | ||||||
21438365-A-T | 19276479-A-T | ** | ||||||
21476645-C-A | 19314759-C-A | ** | ||||||
21486412-C-A | 19324526-C-A | ** | ||||||
21555673-G-T | 19393787-G-T | FT182153 | ** | |||||
21986421-A-C | 19824535-A-C | ** | ||||||
22028306-T-C | 19866420-T-C | ** | ||||||
22044091-C-A | 19882205-C-A | ** | ||||||
22078245-T-A | 19916359-T-A | ** | ||||||
22088758-T-C | 19926872-T-C | ** | ||||||
22143057-A-T | 19981171-A-T | ** | ||||||
22167342-C-G | 20005456-C-G | ** | ||||||
22167351-A-G | 20005465-A-G | ** | ||||||
22167359-A-G | 20005473-A-G | ** | ||||||
22235535-A-C | 20073649-A-C | DYZ19 | ** | |||||
22235542-T-A | 20073656-T-A | DYZ19 | ** | |||||
22235558-G-A | 20073672-G-A | DYZ19 | ** | |||||
22235565-A-AC | 20073679-A-AC | DYZ19 | ** | |||||
22235572-T-C | 20073686-T-C | DYZ19 | ** | |||||
22235572-TA-T | 20073686-TA-T | DYZ19 | ** | |||||
22322045-A-T | 20160159-A-T | DYZ19 | ** | |||||
22325356-T-C | 20163470-T-C | DYZ19 | ** | |||||
22446643-G-A | 20284757-G-A | DYZ19 | ** | |||||
22529772-G-A | 20367886-G-A | FT275137 | ** | |||||
22576402-T-A | 20414516-T-A | ** | ||||||
22652203-C-A | 20490317-C-A | ** | ||||||
22776856-T-G | 20614970-T-G | ** | ||||||
22786990-C-A | 20625104-C-A | ** | ||||||
22836884-C-A | 20674998-C-A | ** | ||||||
22869680-C-A | 20707794-C-A | ** | ||||||
22874325-C-A | 20712439-C-A | ** | ||||||
23010906-A-C | 20849020-A-C | ** | ||||||
23068169-A-G | 20906283-A-G | ** | ||||||
23081890-G-A | 20920004-G-A | ** | ||||||
23465867-C-A | 21303981-C-A | ** | ||||||
23495620-C-A | 21333734-C-A | ** | ||||||
23521000-C-A | 21359114-C-A | ** | ||||||
23729051-A-C | 21567165-A-C | ** | ||||||
23742167-C-T | 21580281-C-T | ** | ||||||
23786341-C-A | 21624455-C-A | ** | ||||||
24267287-T-A | 22121140-T-A | P3_b1 | ** | |||||
24445384-A-G | 22299237-A-G | ** | ||||||
24502361-C-A | 22356214-C-A | ** | ||||||
24503231-C-A | 22357084-C-A | ** | ||||||
24508310-T-A | 22362163-T-A | ** | ||||||
24511286-A-C | 22365139-A-C | ** | ||||||
24636131-G-T | 22489984-G-T | P3_t2 | ** | |||||
26345907-A-C | 24199760-A-C | P1_Y1 | ** | |||||
26377819-C-A | 24231672-C-A | P1_Y1 | ** | |||||
26565445-C-A | 24419298-C-A | P1_g2 | ** | |||||
27127909-A-C | 24981762-A-C | P1_g3 | ** | |||||
27467152-T-G | 25321005-T-G | P1_Y2 | ** | |||||
27546776-C-A | 25400629-C-A | P1_Y2 | ** | |||||
27633724-T-A | 25487577-T-A | P1_Y2 | ** | |||||
27633732-G-T | 25487585-G-T | P1_Y2 | ** | |||||
27769176-G-T | 25623029-G-T | P1_Y2 | ** | |||||
27769195-G-T | 25623048-G-T | P1_Y2 | ** | |||||
27958033-T-G | 25811886-T-G | P1_Y2 | ** | |||||
28483772-C-A | 26337625-C-A | ** | ||||||
28500746-T-G | 26354599-T-G | ** | ||||||
28517942-G-T | 26371795-G-T | ** | ||||||
28537655-C-A | 26391508-C-A | ** | ||||||
28587933-A-C | 26441786-A-C | FTB44420 | ** | |||||
28601058-C-A | 26454911-C-A | ** | ||||||
28689050-C-A | 26542903-C-A | ** | ||||||
28800852-A-C | 26654705-A-C | ** | ||||||
28816024-T-A | 26669877-T-A | ** | ||||||
56763510-T-C | ** | |||||||
56825729-G-T | ** | |||||||
56826784-T-A | ** | |||||||
56827547-CTTTCC-A | ** | |||||||
56857959-G-C | ** | |||||||
56863526-C-T | ** | |||||||
56867808-T-C | ** | |||||||
22487426-G-C | 20325540-G-C | BY48306 | DYZ19 | *** | ||||
13441728-C-A | 11286052-C-A | *** | ||||||
17678621-CTTTTT-C | 15566741-CTTTTT-C | 26×T | *** | |||||
9854343-CTTTTTTTT-C | 10016734-CTTTTTTTT-C | 19×T | *** | |||||
13319489-CAGAG-C | 11163813-CAGAG-C | 8×AG | *** | |||||
17459485-CAAAAAAAA-C | 15347605-CAAAAAAAA-C | 25×A | *** | |||||
17799260-C-A | 15687380-C-A | BY30417 | BY30426 | *** | ||||
5459425-C-A | 5591384-C-A | *** | ||||||
56826901-C-T | *** | |||||||
23540607-TA-T | 21378721-TA-T | 9×A | *** | |||||
11643780-A-T | *** | |||||||
11643714-G-C | *** | |||||||
11643722-T-TAAACC | *** | |||||||
15677505-CAA-C,CA | 13565625-CAA-C,CA | 16×A | *** | |||||
15484439-C-A | 13372559-C-A | *** | ||||||
8054663-C-A | 8186622-C-A | *** | ||||||
15402253-C-A | 13290373-C-A | *** | ||||||
2663777-A-G | 2795736-A-G | *** | ||||||
2835539-CAA-C | 2967498-CAA-C | 12×A | *** | |||||
3831262-T-C | 3963221-T-C | *** | ||||||
6703708-C-A | 6835667-C-A | *** | ||||||
6757366-G-T | 6889325-G-T | *** | ||||||
7241663-G-T | 7373622-G-T | *** | ||||||
7976561-G-T | 8108520-G-T | *** | ||||||
8001754-C-T | 8133713-C-T | A14156 Z45558 | *** | |||||
8088173-CAAA-C,CAA | 8220132-CAAA-C,CAA | 16×A | *** | |||||
8101804-C-A | 8233763-C-A | *** | ||||||
8652786-C-A | 8784745-C-A | *** | ||||||
9443734-AAAG-A | 9606125-AAAG-A | *** | ||||||
9765752-G-A | 9928143-G-A | *** | ||||||
10677465-C-A | *** | |||||||
10785270-T-TCAA | *** | |||||||
10785306-T-G | *** | |||||||
10789574-C-A | *** | |||||||
10839911-G-A,C | *** | |||||||
10969522-C-A | *** | |||||||
13321622-T-C | 11165946-T-C | *** | ||||||
13510993-C-A | 11355317-C-A | *** | ||||||
14327932-C-CT | 12207226-C-CT | 8×T | *** | |||||
14449582-C-A | 12328855-C-A | *** | ||||||
14528531-C-A | 12416732-C-A | *** | ||||||
14566914-A-G | 12455114-A-G | *** | ||||||
14806207-C-A | 12694278-C-A | *** | ||||||
14867029-C-A | 12755099-C-A | *** | ||||||
14938274-A-G | 12826349-A-G | *** | ||||||
15000979-C-A | 12889064-C-A | *** | ||||||
15057738-ATTTTT-A | 12945830-ATTTTT-A | 18×T | *** | |||||
15382957-C-A | 13271077-C-A | *** | ||||||
15662681-T-C | 13550801-T-C | *** | ||||||
16040033-C-A | 13928153-C-A | *** | ||||||
16185939-CATACCTAACATTTTTTGTGA-C | 14074059-CATACCTAACATTTTTTGTGA-C | *** | ||||||
16340190-T-A | 14228310-T-A | *** | ||||||
16481731-ATTT-A | 14369851-ATTT-A | 18×T | *** | |||||
16530502-C-A | 14418622-C-A | *** | ||||||
16590953-CT-C,CTT | 14479073-CT-C,CTT | 11×T | *** | |||||
16631462-AT-A,ATT | 14519582-AT-A,ATT | 14×T | *** | |||||
16668162-G-T | 14556282-G-T | *** | ||||||
16764559-T-C | 14652679-T-C | *** | ||||||
16768601-CTTT-C,CT | 14656721-CTTT-C,CT | 17×T | *** | |||||
16862301-C-A | 14750421-C-A | *** | ||||||
16931759-G-A | 14819879-G-A | *** | ||||||
16960448-C-A | 14848568-C-A | *** | ||||||
17094838-C-A | 14982958-C-A | *** | ||||||
17289193-AT-A | 15177313-AT-A | *** | ||||||
17395552-C-A | 15283672-C-A | *** | ||||||
18034724-C-T | 15922844-C-T | BY119338 | *** | |||||
18052568-ATT-A,ATTTT | 15940688-ATT-A,ATTTT | 16×T | *** | |||||
18085314-C-A | 15973434-C-A | *** | ||||||
18256041-G-T | 16144161-G-T | *** | ||||||
18706981-G-A | 16595101-G-A | *** | ||||||
18832757-TAAA-T | 16720877-TAAA-T | 12×A | *** | |||||
19107045-A-G | 16995165-A-G | *** | ||||||
19294117-C-A | 17182237-C-A | *** | ||||||
19395076-C-A | 17283196-C-A | *** | ||||||
21087399-CAAAA-C | 18925513-CAAAA-C | 14×A | *** | |||||
21095229-C-A | 18933343-C-A | *** | ||||||
21169065-C-A | 19007179-C-A | *** | ||||||
21172497-C-A | 19010611-C-A | *** | ||||||
21503994-ATTTT-A,ATTT | 19342108-ATTTT-A,ATTT | 19×T | *** | |||||
21510199-CT-C,CTTT | 19348313-CT-C,CTTT | 13×T | *** | |||||
21572450-C-A | 19410564-C-A | *** | ||||||
21814078-C-A | 19652192-C-A | *** | ||||||
22023684-GTT-G,GT | 19861798-GTT-G,GT | 17×T | *** | |||||
22159368-C-A | 19997482-C-A | *** | ||||||
22165498-C-A | 20003612-C-A | *** | ||||||
22538537-G-T | 20376651-G-T | *** | ||||||
22647489-C-A | 20485603-C-A | *** | ||||||
22768365-AT-A,AAT | 20606479-AT-A,AAT | *** | ||||||
23209052-C-A | 21047166-C-A | *** | ||||||
23439734-CT-C | 21277848-CT-C | 9×T | *** | |||||
23597497-C-A | 21435611-C-A | *** | ||||||
23981983-G-A | 21835836-G-A | *** | ||||||
24445374-T-G | 22299227-T-G | *** | ||||||
24445376-G-A | 22299229-G-A | *** | ||||||
24445383-C-T | 22299236-C-T | *** | ||||||
28809618-T-A | 26663471-T-A | BY151987 | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.