Roberts
BigY2: 45940, BigY3: 45940MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | BigY2 45940 | BigY3 45940 |
---|---|---|---|---|---|---|---|---|---|
16107330-A-G | 13995450-A-G | CTS6919 BY654 | ZZ15_1 Z16244 | P8_Prx | A* | ||||
19054889-T-C | 16943009-T-C | V3721 | Y | Y | A* | ||||
22739367-C-T | 20577481-C-T | Y | Y | A* | |||||
5166408-G-A | 5298367-G-A | A* | |||||||
6239501-G-A | 6371460-G-A | IR3_Dst | A* | ||||||
7100362-T-C | 7232321-T-C | FGC58 CTS944 | Y | A* | |||||
16005138-C-A | 13893258-C-A | CTS5082 | Y | A* | |||||
18363337-A-T | 16251457-A-T | P6_Prx | A* | ||||||
19648564-T-A | 17536684-T-A | ZS5880 | P5_Prx | A* | |||||
19858951-G-A | 17747071-G-A | ZS3711 | P5_Prx | A* | |||||
19658848-A-C | 17546968-A-C | P5_Prx | A* | ||||||
21863435-C-G | 19701549-C-G | S3997 | FT25730 | Y | A* | ||||
25525698-G-A | 23379551-G-A | P1_gr1 | A* | ||||||
6338822-C-T | 6470781-C-T | BY21721 | IR3_Dst | 4×TAAT | A* | ||||
6307914-G-C | 6439873-G-C | Z16668 | IR3_Dst | A* | |||||
19684564-T-C | 17572684-T-C | P5_Prx | A* | A* | |||||
19884123-C-T | 17772243-C-T | P5_Prx | A* | A* | |||||
26335860-G-T | 24189713-G-T | P1_Y1 | A* | ||||||
18296168-C-CT | 16184288-C-CT | P6_Prx | 10×T | A* | |||||
3198439-G-C | 3330398-G-C | A* | |||||||
6232179-T-G | 6364138-T-G | IR3_Dst | A* | ||||||
18309545-G-A | 16197665-G-A | P6_Prx | A* | ||||||
19846266-T-GTACAATACAAA | 17734386-T-GTACAATACAAA | P5_Prx | A* | ||||||
20333510-A-TTTGTATTGTAC | 18171624-A-TTTGTATTGTAC | P5_Dst | A* | ||||||
24256305-A-T | 22110158-A-T | FT460903 | P3_b1 | 4×ATTT | A* | ||||
25547499-G-A | 23401352-G-A | P1_gr1 | A* | ||||||
25899508-T-C | 23753361-T-C | P1_Y1 | A* | ||||||
23126871-C-T | 20964985-C-T | BY143177 | Y | Y | + | * | |||
21044478-A-T | 18882592-A-T | Z32705 BY6846 | Y | + | * | ||||
7555263-A-C | 7687222-A-C | BY65868 | Y | Y | + | * | |||
9130619-A-C | 9293010-A-C | BY78374 | Y | + | * | ||||
14409316-C-T | 12288613-C-T | BY95557 | Y | Y | + | * | |||
14553650-T-G | 12441851-T-G | BY96457 | Y | Y | + | * | |||
14866238-T-C | 12754308-T-C | BY98099 | Y | Y | + | * | |||
14921501-G-A | 12809566-G-A | BY98496 | Y | Y | + | * | |||
14921502-G-T | 12809567-G-T | BY98497 | Y | Y | + | * | |||
15471989-C-T | 13360109-C-T | BY101800 | Y | Y | + | * | |||
15944538-A-G | 13832658-A-G | BY105038 | Y | Y | + | * | |||
16596574-C-A | 14484694-C-A | BY108882 | Y | Y | + | * | |||
17491336-T-A | 15379456-T-A | BY115189 | Y | Y | + | * | |||
17632550-C-T | 15520670-C-T | BY116269 | Y | Y | + | * | |||
18026415-T-A | 15914535-T-A | BY119239 | Y | + | * | ||||
18110771-T-A | 15998891-T-A | BY120124 | Y | Y | + | * | |||
18635723-T-C | 16523843-T-C | BY122735 | Y | Y | + | * | |||
18644517-A-T | 16532637-A-T | BY122813 | Y | Y | + | * | |||
18647019-C-G | 16535139-C-G | BY122837 | Y | Y | + | * | |||
19458493-T-C | 17346613-T-C | BY129272 | Y | Y | + | * | |||
21444895-A-G | 19283009-A-G | BY132966 | Y | Y | + | * | |||
22671648-T-C | 20509762-T-C | BY139919 | Y | Y | + | * | |||
22808319-C-A | 20646433-C-A | BY140916 | Y | Y | + | * | |||
22846238-G-T | 20684352-G-T | BY141208 | Y | Y | + | * | |||
23080537-C-G | 20918651-C-G | BY142858 | Y | Y | + | * | |||
4995902-C-A | 5127861-C-A | ** | * | ||||||
14232761-T-C | 12112055-T-C | Y | Y | ** | * | ||||
14507579-C-A | 12395784-C-A | Y | Y | ** | * | ||||
16508759-T-G | 14396879-T-G | Y | Y | ** | * | ||||
17275835-GAAGCAAAGCA-G | 15163955-GAAGCAAAGCA-G | 6×AAGCA | * | * | |||||
17879788-T-C | 15767908-T-C | Y | Y | ** | * | ||||
19500763-G-GTAGA | 17388883-G-GTAGA | 5×TAGA | * | ||||||
22302058-G-A | 20140172-G-A | DYZ19 | * | *** | |||||
22302594-G-A | 20140708-G-A | DYZ19 | * | ||||||
23184317-A-T | 21022431-A-T | Y | ** | * | |||||
28795982-G-A | 26649835-G-A | * | |||||||
13977014-C-A | 11856308-C-A | Y | * | ||||||
3502997-G-T | 3634956-G-T | * | |||||||
3683784-C-A | 3815743-C-A | * | |||||||
4273288-T-C | 4405247-T-C | * | |||||||
4521881-A-T | 4653840-A-T | * | |||||||
5248516-C-G | 5380475-C-G | * | |||||||
5630808-A-G | 5762767-A-G | * | |||||||
5836312-T-G | 5968271-T-G | * | |||||||
5995472-G-A | 6127431-G-A | * | |||||||
6463367-A-T | 6595326-A-T | * | |||||||
6606341-A-T | 6738300-A-T | FT223679 | * | ||||||
6791683-T-A | 6923642-T-A | Y | Y | * | |||||
10856171-C-A | * | ||||||||
10907917-T-C | * | ||||||||
14107710-C-T | 11987004-C-T | Y | Y | * | |||||
17548445-G-A | 15436565-G-A | FT196520 | Y | * | |||||
23358590-C-A | 21196704-C-A | Y | * | ||||||
28655172-G-C | 26509025-G-C | * | |||||||
13143134-A-C | 10632620-A-C | ** | |||||||
58980777-TTTCAC-T | 56834630-TTTCAC-T | ** | |||||||
59020047-G-A | 56873900-G-A | ** | |||||||
3612138-T-A | 3744097-T-A | ** | |||||||
17567384-C-A | 15455504-C-A | ** | |||||||
16063410-C-A | 13951530-C-A | ** | |||||||
16703792-G-T | 14591912-G-T | ** | |||||||
10673854-ACT-A | ** | ||||||||
28406874-C-A | 26260727-C-A | P1_gr2 | ** | ||||||
19271375-C-A | 17159495-C-A | ** | |||||||
10889236-T-G | ** | ||||||||
28591260-C-A | 26445113-C-A | ** | |||||||
10880909-C-A | ** | ||||||||
19827417-G-T | 17715537-G-T | P5_Prx | ** | ||||||
9852870-C-A | 10015261-C-A | ** | |||||||
2856600-C-A | 2988559-C-A | ** | |||||||
23009911-G-T | 20848025-G-T | ** | |||||||
10669454-C-CACTTG | ** | ||||||||
10789323-T-C | ** | ||||||||
56851076-G-T | ** | ||||||||
13459547-T-G | 11303871-T-G | ** | |||||||
10763018-T-C | ** | ||||||||
13212526-C-A | 11056850-C-A | ** | |||||||
16271807-GAAAAAAA-G | 14159927-GAAAAAAA-G | 19×A | ** | ||||||
10781521-C-A | ** | ||||||||
21482757-C-A | 19320871-C-A | ** | |||||||
17103988-G-T | 14992108-G-T | ** | |||||||
19520729-C-A | 17408849-C-A | ** | |||||||
2766688-A-AT | 2898647-A-AT | 9×T | ** | ||||||
2778643-A-C | 2910602-A-C | ** | |||||||
2784548-C-A | 2916507-C-A | ** | |||||||
2845261-G-A | 2977220-G-A | ** | |||||||
2860202-A-T | 2992161-A-T | ** | |||||||
2986108-T-A | 3118067-T-A | ** | |||||||
3032628-CTT-C | 3164587-CTT-C | 9×T | ** | ||||||
3032951-A-C | 3164910-A-C | ** | |||||||
3147725-G-T | 3279684-G-T | ** | |||||||
3147758-G-T | 3279717-G-T | ** | |||||||
3148097-C-A | 3280056-C-A | ** | |||||||
3285824-G-T | 3417783-G-T | ** | |||||||
3286673-C-A | 3418632-C-A | ** | |||||||
3376081-T-A | 3508040-T-A | ** | |||||||
3606016-T-A | 3737975-T-A | ** | |||||||
3828938-G-T | 3960897-G-T | ** | |||||||
3829006-C-A | 3960965-C-A | ** | |||||||
4004896-G-T | 4136855-G-T | ** | |||||||
4057229-G-T | 4189188-G-T | ** | |||||||
4074633-G-T | 4206592-G-T | ** | |||||||
4108222-C-A | 4240181-C-A | ** | |||||||
4339641-G-T | 4471600-G-T | ** | |||||||
4443061-C-A | 4575020-C-A | ** | |||||||
4456469-G-T | 4588428-G-T | ** | |||||||
4632164-C-A | 4764123-C-A | ** | |||||||
4700527-C-A | 4832486-C-A | ** | |||||||
4919363-A-C | 5051322-A-C | ** | |||||||
4926034-G-T | 5057993-G-T | ** | |||||||
5014349-A-G | 5146308-A-G | ** | |||||||
5133205-C-A | 5265164-C-A | ** | |||||||
5185370-T-A | 5317329-T-A | ** | |||||||
5292226-G-A | 5424185-G-A | ** | |||||||
5406653-G-T | 5538612-G-T | ** | |||||||
5418313-C-A | 5550272-C-A | ** | |||||||
5459243-G-C | 5591202-G-C | ** | |||||||
5459843-C-A | 5591802-C-A | ** | |||||||
5651396-T-A | 5783355-T-A | ** | |||||||
5775541-C-A | 5907500-C-A | ** | |||||||
5780761-A-C | 5912720-A-C | ** | |||||||
5976952-A-T | 6108911-A-T | ** | |||||||
5977926-C-A | 6109885-C-A | ** | |||||||
5993261-A-C | 6125220-A-C | ** | |||||||
6435082-C-A | 6567041-C-A | ** | |||||||
6528805-C-A | 6660764-C-A | ** | |||||||
6559163-T-A | 6691122-T-A | ** | |||||||
6602849-C-A | 6734808-C-A | ** | |||||||
6641760-T-C | 6773719-T-C | ** | |||||||
6646767-C-A | 6778726-C-A | ** | |||||||
6714641-C-A | 6846600-C-A | ** | |||||||
6744476-C-A | 6876435-C-A | ** | |||||||
6790217-C-A | 6922176-C-A | ** | |||||||
6816628-A-T | 6948587-A-T | ** | |||||||
6918561-AAAAAAG-A | 7050520-AAAAAAG-A | ** | |||||||
6992553-CTTTTTTTTTTTT-C | 7124512-CTTTTTTTTTTTT-C | 17×T | ** | *** | |||||
6992559-T-G | 7124518-T-G | ** | |||||||
7012709-C-A | 7144668-C-A | ** | |||||||
7038540-C-A | 7170499-C-A | ** | |||||||
7081807-C-A | 7213766-C-A | ** | |||||||
7092295-C-A | 7224254-C-A | ** | |||||||
7116054-C-G | 7248013-C-G | ** | |||||||
7170843-C-A | 7302802-C-A | ** | |||||||
7202316-T-G | 7334275-T-G | ** | |||||||
7334061-C-A | 7466020-C-A | ** | |||||||
7360458-C-A | 7492417-C-A | ** | |||||||
7534637-AAC-A | 7666596-AAC-A | ** | |||||||
7643157-C-A | 7775116-C-A | ** | |||||||
7828946-C-A | 7960905-C-A | ** | |||||||
7994270-C-A | 8126229-C-A | ** | |||||||
8073967-C-A | 8205926-C-A | ** | |||||||
8079157-G-T | 8211116-G-T | ** | |||||||
8095597-T-G | 8227556-T-G | ** | |||||||
8214097-C-A | 8346056-C-A | ** | |||||||
8281639-C-A | 8413598-C-A | ** | |||||||
8673300-C-A | 8805259-C-A | ** | |||||||
8678071-G-A | 8810030-G-A | Y64323 | ** | ||||||
9075940-C-A | 9238331-C-A | ** | |||||||
9311348-G-T | 9473739-G-T | ** | |||||||
9379008-A-G | 9541399-A-G | ** | |||||||
9427767-G-T | 9590158-G-T | ** | |||||||
9513336-T-C | 9675727-T-C | ** | |||||||
9937672-C-A | 10100063-C-A | ** | |||||||
9941273-C-A | 10103664-C-A | ** | |||||||
9979248-C-A | 10141639-C-A | ** | |||||||
10661862-C-A | ** | ||||||||
10692056-A-T | ** | ||||||||
10692256-T-A | ** | ||||||||
10692262-A-G | ** | ||||||||
10746974-A-C | ** | ||||||||
10746975-T-TTACTC | ** | ||||||||
10746998-C-CGGTT | ** | ||||||||
10748219-C-G | ** | ||||||||
10748258-A-ATAGCACTCCG | ** | ||||||||
10751456-C-A | ** | ||||||||
10758936-C-A | ** | ||||||||
10762987-CCTCCT-C | ** | ||||||||
10765634-G-T | ** | ||||||||
10766127-C-T | ** | ||||||||
10766132-C-T | ** | ||||||||
10766133-A-T | ** | ||||||||
10766142-T-C | ** | ||||||||
10766152-C-T | ** | ||||||||
10766193-T-C | ** | ||||||||
10766194-C-A | ** | ||||||||
10766210-A-G | ** | ||||||||
10766225-C-A | ** | ||||||||
10766233-C-G | ** | ||||||||
10766234-T-A | ** | ||||||||
10766237-G-A | ** | ||||||||
10766396-C-A | ** | ||||||||
10781497-T-A | ** | ||||||||
10781515-G-A | ** | ||||||||
10787846-G-T | ** | ||||||||
10793686-C-A | ** | ||||||||
10796652-C-CGGAGG | ** | ||||||||
10801659-T-G | ** | ||||||||
10801674-T-G | ** | ||||||||
10809645-CT-C | ** | ||||||||
10820476-C-A | ** | ||||||||
10824489-T-G | ** | ||||||||
10832358-C-A | ** | ||||||||
10836980-C-A | ** | ||||||||
10841966-T-A | ** | ||||||||
10843702-A-T | ** | ||||||||
10843707-A-T | ** | ||||||||
10843761-A-T | BY4005 | FT127795 | ** | ||||||
10849498-C-A | FT434024 | ** | |||||||
10849573-C-A | ** | ||||||||
10849790-T-C | ** | ||||||||
10876820-A-G | ** | ||||||||
10876822-A-C | ** | ||||||||
10876824-A-T | ** | ||||||||
10876826-A-C | ** | ||||||||
10876828-C-T | ** | ||||||||
10876836-A-G | ** | ||||||||
10876841-T-C | ** | ||||||||
10876843-TTGACCAG-T | ** | ||||||||
10876862-C-T | ** | ||||||||
10876880-T-C | ** | ||||||||
10882953-T-C | ** | ||||||||
10889228-C-T | ** | ||||||||
10893059-C-A | ** | ||||||||
10902845-G-T | ** | ||||||||
10917222-T-A | ** | ||||||||
10917266-C-A | ** | ||||||||
10935537-C-A | ** | ||||||||
10935542-C-A | ** | ||||||||
10935546-C-A | ** | ||||||||
10935588-A-ATACTG | ** | ||||||||
10936881-C-A | ** | ||||||||
10945423-C-A | ** | ||||||||
10951211-A-C | ** | ||||||||
10951221-C-G | ** | ||||||||
10951228-A-T | ** | ||||||||
10951235-T-G | ** | ||||||||
10958370-A-T | ** | ||||||||
10967539-A-G | ** | ||||||||
10987777-T-TTAATC | ** | ||||||||
11008738-C-A | ** | ||||||||
11026050-C-A | ** | ||||||||
13197075-C-A | 11041399-C-A | ** | |||||||
13234368-C-A | 11078692-C-A | ** | |||||||
13387644-G-T | 11231968-G-T | ** | |||||||
13445943-G-A | 11290267-G-A | ** | |||||||
13482264-C-A | 11326588-C-A | ** | |||||||
13509042-G-T | 11353366-G-T | ** | |||||||
13566021-A-C | 11410345-A-C | ** | |||||||
13628542-A-T | 11472866-A-T | ** | |||||||
13695490-T-G | 11539814-T-G | ** | |||||||
13700852-AG-A | 11545176-AG-A | ** | |||||||
13709305-T-C | 11553629-T-C | ** | |||||||
13725723-T-A | 11570047-T-A | ** | |||||||
11643693-G-GGATTCAAACC | ** | ||||||||
11648710-G-A | ** | ||||||||
11649568-G-T | ** | ||||||||
13811116-A-C | 11690410-A-C | ** | |||||||
13858529-G-A | 11737823-G-A | ** | |||||||
13858538-T-G | 11737832-T-G | ** | |||||||
13858541-A-AGTGTT | 11737835-A-AGTGTT | ** | |||||||
13858547-A-T | 11737841-A-T | ** | |||||||
13858562-A-G | 11737856-A-G | ** | |||||||
13925802-A-T | 11805096-A-T | ** | |||||||
13926949-C-G | 11806243-C-G | ** | |||||||
13969903-C-A | 11849197-C-A | ** | |||||||
14008803-AC-A | 11888097-AC-A | ** | |||||||
14021289-T-G | 11900583-T-G | ** | |||||||
14241190-C-A | 12120484-C-A | ** | |||||||
14270009-C-A | 12149303-C-A | ** | |||||||
14431232-C-A | 12310505-C-A | ** | |||||||
14506079-G-C | 12394284-G-C | ** | |||||||
14506734-A-T | 12394939-A-T | ** | |||||||
14527703-C-A | 12415904-C-A | ** | |||||||
14539656-T-C | 12427857-T-C | ** | |||||||
14551582-A-T | 12439783-A-T | ** | |||||||
14558409-G-T | 12446610-G-T | ** | |||||||
14584571-A-T | 12472771-A-T | ** | |||||||
14593638-T-A | 12481838-T-A | ** | |||||||
14678841-G-T | 12566907-G-T | ** | |||||||
14714834-C-A | 12602901-C-A | ** | |||||||
14720119-A-T | 12608187-A-T | ** | |||||||
14736066-T-G | 12624134-T-G | ** | |||||||
14736139-T-G | 12624207-T-G | ** | |||||||
14757744-A-C | 12645813-A-C | ** | |||||||
14988867-C-A | 12876933-C-A | ** | |||||||
15114179-C-T | 13002266-C-T | ** | |||||||
15160673-G-T | 13048759-G-T | ** | |||||||
15183643-G-C | 13071729-G-C | ** | |||||||
15197467-T-A | 13085553-T-A | ** | |||||||
15230955-C-A | 13119041-C-A | ** | |||||||
15380376-G-T | 13268496-G-T | ** | |||||||
15392504-A-T | 13280624-A-T | ** | |||||||
15503250-A-C | 13391370-A-C | ** | |||||||
15542117-C-A | 13430237-C-A | ** | |||||||
15622594-T-G | 13510714-T-G | ** | |||||||
15756328-C-A | 13644448-C-A | ** | |||||||
15785963-C-A | 13674083-C-A | ** | |||||||
15898916-C-G | 13787036-C-G | ** | |||||||
15909463-C-A | 13797583-C-A | ** | |||||||
16029021-C-A | 13917141-C-A | ** | |||||||
16274227-T-A | 14162347-T-A | ** | |||||||
16295794-G-T | 14183914-G-T | ** | |||||||
16421970-C-A | 14310090-C-A | ** | |||||||
16514486-C-G | 14402606-C-G | ** | |||||||
16656714-G-A | 14544834-G-A | ** | |||||||
16681708-T-C | 14569828-T-C | ** | |||||||
16703721-A-T | 14591841-A-T | ** | |||||||
16765520-T-G | 14653640-T-G | ** | |||||||
16933087-T-G | 14821207-T-G | ** | |||||||
16968176-AG-A | 14856296-AG-A | ** | |||||||
17051397-A-T | 14939517-A-T | ** | |||||||
17088861-A-C | 14976981-A-C | ** | |||||||
17136909-A-T | 15025029-A-T | ** | |||||||
17196363-T-G | 15084483-T-G | ** | |||||||
17231477-C-A | 15119597-C-A | ** | |||||||
17246543-C-A | 15134663-C-A | ** | |||||||
17328941-C-A | 15217061-C-A | ** | |||||||
17328999-C-A | 15217119-C-A | ** | |||||||
17505199-G-T | 15393319-G-T | ** | |||||||
17622522-C-A | 15510642-C-A | ** | |||||||
17638442-G-T | 15526562-G-T | ** | |||||||
17654924-A-T | 15543044-A-T | ** | |||||||
17707204-C-A | 15595324-C-A | ** | |||||||
18047423-C-A | 15935543-C-A | ** | |||||||
18108569-C-A | 15996689-C-A | ** | |||||||
18369830-G-C | 16257950-G-C | P6_Prx | ** | ||||||
18447610-C-A | 16335730-C-A | P6_Dst | ** | ||||||
18794133-G-C | 16682253-G-C | ** | |||||||
18794150-T-A | 16682270-T-A | ** | |||||||
18993389-C-A | 16881509-C-A | ** | |||||||
19039139-C-A | 16927259-C-A | ** | |||||||
19042933-C-A | 16931053-C-A | ** | |||||||
19109953-G-T | 16998073-G-T | FT151414 | ** | ||||||
19111352-G-T | 16999472-G-T | ** | |||||||
19123222-G-T | 17011342-G-T | ** | |||||||
19135286-C-A | 17023406-C-A | ** | |||||||
19166083-C-A | 17054203-C-A | ** | |||||||
19247074-C-A | 17135194-C-A | ** | |||||||
19254246-A-C | 17142366-A-C | ** | |||||||
19270537-CAAAAA-C | 17158657-CAAAAA-C | 21×A | ** | ||||||
19296873-T-G | 17184993-T-G | ** | |||||||
19377210-G-A | 17265330-G-A | ** | |||||||
19377323-G-C | 17265443-G-C | ** | |||||||
19409944-C-A | 17298064-C-A | ** | |||||||
19429665-C-A | 17317785-C-A | ** | |||||||
19429710-C-A | 17317830-C-A | ** | |||||||
19517905-T-G | 17406025-T-G | ** | |||||||
19600436-TGC-T | 17488556-TGC-T | P5_Prx | ** | ||||||
19600508-G-TTT | 17488628-G-TTT | P5_Prx | ** | ||||||
19839569-G-T | 17727689-G-T | P5_Prx | ** | ||||||
20129008-A-AT | 18017128-A-AT | P5_Dst | ** | ||||||
20470186-C-A | 18308300-C-A | P5_Dst | ** | ||||||
20557588-G-T | 18395702-G-T | P5_Dst | ** | ||||||
20557620-G-T | 18395734-G-T | P5_Dst | ** | ||||||
20620881-A-C | 18458995-A-C | P4_Prx | ** | ||||||
20950422-C-A | 18788536-C-A | P4_Dst | ** | ||||||
21196547-T-G | 19034661-T-G | ** | |||||||
21299362-C-A | 19137476-C-A | FT108242 | ** | ||||||
21531510-A-T | 19369624-A-T | ** | |||||||
21531513-A-T | 19369627-A-T | ** | |||||||
21531547-A-T | 19369661-A-T | ** | |||||||
21584711-C-A | 19422825-C-A | ** | |||||||
21584993-ATATACTTTCTTC-A | 19423107-ATATACTTTCTTC-A | ** | |||||||
21585010-T-C | 19423124-T-C | ** | |||||||
21585025-A-T | 19423139-A-T | ** | |||||||
21585029-C-G | 19423143-C-G | ** | |||||||
21585046-C-T | 19423160-C-T | ** | |||||||
21585052-G-A | 19423166-G-A | ** | |||||||
21742964-C-T | 19581078-C-T | ** | |||||||
21946420-C-A | 19784534-C-A | ** | |||||||
21996113-C-A | 19834227-C-A | ** | |||||||
22085446-C-T | 19923560-C-T | ** | |||||||
22149841-A-C | 19987955-A-C | ** | |||||||
22268144-T-C | 20106258-T-C | DYZ19 | ** | ||||||
22423679-C-T | 20261793-C-T | DYZ19 | ** | ||||||
22513070-C-A | 20351184-C-A | ** | |||||||
22587107-A-C | 20425221-A-C | ** | |||||||
22703642-A-T | 20541756-A-T | ** | |||||||
22720513-A-C | 20558627-A-C | ** | |||||||
23098056-T-A | 20936170-T-A | ** | |||||||
23142950-C-A | 20981064-C-A | ** | |||||||
23311138-C-A | 21149252-C-A | ** | |||||||
23311142-C-A | 21149256-C-A | ** | |||||||
23341846-T-A | 21179960-T-A | ** | |||||||
23426973-A-T | 21265087-A-T | ** | |||||||
23440210-A-C | 21278324-A-C | ** | |||||||
23610092-G-T | 21448206-G-T | ** | |||||||
24450603-G-T | 22304456-G-T | ** | |||||||
24616560-T-A | 22470413-T-A | P3_t2 | ** | ||||||
24616563-G-A | 22470416-G-A | P3_t2 | ** | ||||||
24616571-G-C | 22470424-G-C | P3_t2 | ** | ||||||
25815249-G-T | 23669102-G-T | P1_b3 | ** | ||||||
25841751-C-A | 23695604-C-A | P1_b3 | ** | ||||||
25875647-G-T | 23729500-G-T | P1_Y1 | ** | ||||||
25875653-C-A | 23729506-C-A | P1_Y1 | ** | ||||||
25994926-G-T | 23848779-G-T | P1_Y1 | ** | ||||||
26138362-A-T | 23992215-A-T | P1_Y1 | ** | ||||||
26153741-G-T | 24007594-G-T | P1_Y1 | ** | ||||||
26250840-G-T | 24104693-G-T | P1_Y1 | ** | ||||||
26254260-A-T | 24108113-A-T | P1_Y1 | ** | ||||||
27232054-T-C | 25085907-T-C | P1_g3 | ** | ||||||
27863748-G-A | 25717601-G-A | P1_Y2 | ** | ||||||
27898420-C-A | 25752273-C-A | P1_Y2 | ** | ||||||
28478320-G-A | 26332173-G-A | ** | |||||||
28478333-C-A | 26332186-C-A | ** | |||||||
28478866-A-T | 26332719-A-T | ** | |||||||
28525344-CAA-C | 26379197-CAA-C | 11×A | ** | ||||||
28545927-CA-C | 26399780-CA-C | 8×A | ** | ||||||
28635196-C-A | 26489049-C-A | ** | |||||||
28659474-T-A | 26513327-T-A | ** | |||||||
28755068-C-A | 26608921-C-A | ** | |||||||
28755709-C-A | 26609562-C-A | ** | |||||||
28764936-C-A | 26618789-C-A | ** | |||||||
28771585-C-A | 26625438-C-A | ** | |||||||
28804433-AGAGTG-A | 26658286-AGAGTG-A | ** | |||||||
28819294-T-A | 26673147-T-A | ** | |||||||
56823067-A-C | ** | ||||||||
56836086-C-A | ** | ||||||||
56845206-G-T | ** | ||||||||
56851159-G-T | ** | ||||||||
56851160-G-T | ** | ||||||||
56851175-T-TC | ** | ||||||||
56851177-TC-T | ** | ||||||||
56851186-C-T | ** | ||||||||
56874018-G-T | ** | ||||||||
27943977-CA-C | 25797830-CA-C | P1_Y2 | ** | ||||||
13459569-C-A | 11303893-C-A | ** | |||||||
3612135-T-A | 3744094-T-A | ** | |||||||
13459541-A-T | 11303865-A-T | ** | |||||||
18276612-G-T | 16164732-G-T | P6_Prx | ** | ||||||
19616050-T-G | 17504170-T-G | P5_Prx | ** | ||||||
19624670-A-C | 17512790-A-C | P5_Prx | ** | ||||||
19682794-A-C | 17570914-A-C | P5_Prx | ** | ||||||
19691974-A-C | 17580094-A-C | P5_Prx | ** | ||||||
19706231-T-A | 17594351-T-A | P5_Prx | ** | ||||||
20732757-T-G | 18570871-T-G | P4_Prx | ** | ||||||
24259655-A-T | 22113508-A-T | P3_b1 | ** | ||||||
25883617-G-T | 23737470-G-T | P1_Y1 | ** | ||||||
26337104-T-G | 24190957-T-G | P1_Y1 | ** | ||||||
16726837-G-T | 14614957-G-T | *** | |||||||
21581064-T-C | 19419178-T-C | *** | |||||||
9169928-C-A | 9332319-C-A | Y29027 | Y29023 | *** | |||||
21328805-CAAAAAAAAAAA-C | 19166919-CAAAAAAAAAAA-C | 30×A | *** | ||||||
21085779-CAAAAAAAA-C | 18923893-CAAAAAAAA-C | 24×A | *** | ||||||
10746998-C-G | *** | ||||||||
13838776-G-A | 11718070-G-A | *** | |||||||
22904219-C-A | 20742333-C-A | *** | |||||||
16805792-TA-T,TAA | 14693912-TA-T,TAA | 14×A | *** | ||||||
10888029-T-A | *** | ||||||||
4841655-G-T | 4973614-G-T | *** | |||||||
7294347-G-T | 7426306-G-T | *** | |||||||
7417561-CT-C,CTT | 7549520-CT-C,CTT | 14×T | *** | ||||||
7516187-C-A | 7648146-C-A | *** | |||||||
8182205-CAAA-C,CAA | 8314164-CAAA-C,CAA | 18×A | *** | ||||||
8398996-C-A | 8530955-C-A | *** | |||||||
8636047-G-T | 8768006-G-T | *** | |||||||
10746957-C-A | *** | ||||||||
10746963-C-GGAATGATTCT | *** | ||||||||
10775954-C-A | *** | ||||||||
10796691-C-CTGATT | *** | ||||||||
10980703-C-T | *** | ||||||||
10980704-C-T | *** | ||||||||
10980729-C-T | *** | ||||||||
10987815-A-T | *** | ||||||||
11033904-T-C | *** | ||||||||
14232916-C-A | 12112210-C-A | *** | |||||||
14549309-CAAA-C,CA | 12437510-CAAA-C,CA | 16×A | *** | ||||||
16063385-C-A | 13951505-C-A | *** | |||||||
16520873-G-T | 14408993-G-T | *** | |||||||
17386774-TAAA-T | 15274894-TAAA-T | 15×A | *** | ||||||
17465052-C-A | 15353172-C-A | *** | |||||||
17860195-G-T | 15748315-G-T | *** | |||||||
19131668-C-A | 17019788-C-A | *** | |||||||
19429641-C-A | 17317761-C-A | *** | |||||||
21086136-TAAAAA-T | 18924250-TAAAAA-T | 24×A | *** | ||||||
21211510-C-A | 19049624-C-A | *** | |||||||
21556619-A-G | 19394733-A-G | *** | |||||||
22200355-CAA-C,CA | 20038469-CAA-C,CA | 13×A | *** | ||||||
23818259-A-G | 21656373-A-G | *** | |||||||
24518677-G-T | 22372530-G-T | *** | |||||||
19187446-CTTTT-C,CTTT | 17075566-CTTTT-C,CTTT | 34×T | *** | ||||||
3457210-C-T | 3589169-C-T | *** | |||||||
4366170-G-A | 4498129-G-A | *** | |||||||
9508531-CTT-C,CT | 9670922-CTT-C,CT | 25×T | *** | ||||||
9766811-G-C | 9929202-G-C | *** | |||||||
10911334-A-C | *** | ||||||||
13623197-A-C | 11467521-A-C | *** | |||||||
14247885-A-G | 12127179-A-G | BY94311 | *** | ||||||
28545696-CAAAAAAAAAAA-C | 26399549-CAAAAAAAAAAA-C | 26×A | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.