McCarthy

FTDNA: 177666, BigY2: 177666
MDKA Birth: Ireland

Tree Position

R-P312/S116 > Z290 > L21/S145 > S552 > DF13 > DF21/S192 > FGC3213 > Z16532 > Z16526 > Z16524 > Z16534 > Z29539 > L362 > ZS4606 > ZS4598 > ZZ50 > Z29544

Unique Mutations

The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.

Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.

POS-REF-ALT (hg19) POS-REF-ALT (hg38) Blocks Names Region McDonald BED combBED STRFTDNA
177666		BigY2
177666
7324082-T-C 7456041-T-C BY64561 YY++
14838721-C-T 12726788-C-T BY97912 YY++
8600023-C-T 8731982-C-T **
4389400-C-T 4521359-C-T **
22321549-T-A 20159663-T-A FGC22202 DYZ19 **
7134659-C-T 7266618-C-T F912 ****
6402667-C-A 6534626-C-A **
58858932-C-T 56731939-G-A S3129 **
16157735-G-GA 14045855-G-GA P8_Dst 10×AAAGA**
14463322-C-A 12342595-C-A **
2763696-C-A 2895655-C-A **
28778852-C-T 26632705-C-T FT461597 33×T**
22321558-G-C 20159672-G-C DYZ19 **
7197431-C-A 7329390-C-A **
7567782-G-A 7699741-G-A **
23435703-TG-T 21273817-TG-T **
7567779-G-T 7699738-G-T **
10992308-T-C **
21515860-C-T 19353974-C-T **
13466113-T-A 11310437-T-A **
13466119-T-C 11310443-T-C **
28812347-A-C 26666200-A-C **
3271825-A-T 3403784-A-T **
21946446-T-A 19784560-T-A **
10964803-A-T **
23274738-GCT-G 21112852-GCT-G **
10685780-T-A **
19508241-C-A 17396361-C-A **
15904145-A-C 13792265-A-C **
19226615-C-A 17114735-C-A **
13255714-C-A 11100038-C-A **
15209275-C-A 13097361-C-A **
10964867-C-A **
13480634-C-A 11324958-C-A **
10992736-C-A **
28812356-G-C 26666209-G-C **
30964-C-A **
56732022-A-G **
10940528-C-A **
7269786-C-A 7401745-C-A **
28521206-C-A 26375059-C-A **
21742660-G-T 19580774-G-T **
14554395-C-A 12442596-C-A **
56714095-T-TCTTCC **
56714132-G-C **
21000914-T-TAG 18839028-T-TAG P4_Dst **
10826861-C-T **
15198645-C-A 13086731-C-A **
10826846-T-C **
28724787-C-A 26578640-C-A **
16305817-T-A 14193937-T-A **
17313537-T-G 15201657-T-G **
16474685-C-A 14362805-C-A **
15683671-C-A 13571791-C-A **
7643157-C-A 7775116-C-A **
14527703-C-A 12415904-C-A **
14445574-C-A 12324847-C-A **
22777028-A-C 20615142-A-C **
27733795-G-T 25587648-G-T P1_Y2 **
23350660-C-A 21188774-C-A **
13919208-CAAAAA-C 11798502-CAAAAA-C 17×A**
28583132-G-T 26436985-G-T **
14694838-C-A 12582904-C-A **
13327143-C-A 11171467-C-A **
19932026-T-C 17820146-T-C P5_Prx **
22218876-C-A 20056990-C-A DYZ19 **
28659485-C-A 26513338-C-A **
28534539-C-A 26388392-C-A **
24112763-C-A 21966616-C-A P3_b1 **
21346379-C-A 19184493-C-A **
24472465-G-T 22326318-G-T **
10950412-C-T **
8253626-C-A 8385585-C-A **
7385341-C-A 7517300-C-A **
28480327-A-C 26334180-A-C **
19146599-A-G 17034719-A-G **
14195886-A-C 12075180-A-C **
3061150-C-A 3193109-C-A **
15532549-C-A 13420669-C-A **
24472458-T-C 22326311-T-C **
19318120-A-C 17206240-A-C **
14464331-A-ATT 12343604-A-ATT 13×T**
10802286-C-A **
20300959-C-A 18139073-C-A P5_Dst **
10885860-C-A **
7383709-T-C 7515668-T-C **
7139194-C-A 7271153-C-A **
10973890-AT-A **
18565050-A-G 16453170-A-G **
5017582-C-A 5149541-C-A **
3965254-C-A 4097213-C-A **
10975792-A-T **
21623841-G-A 19461955-G-A **
18662413-C-A 16550533-C-A **
11017523-C-A **
21266674-C-A 19104788-C-A **
7201629-C-T 7333588-C-T **
17346379-C-A 15234499-C-A **
10975804-T-A **
10975807-T-C **
10975822-A-T **
10975827-A-AATCCT **
16015236-C-A 13903356-C-A **
10864735-C-A **
28555653-C-A 26409506-C-A **
4898111-C-A 5030070-C-A **
15987399-C-A 13875519-C-A **
4957178-C-A 5089137-C-A **
10773452-C-A **
11662897-C-A **
17567340-C-A 15455460-C-A **
24634134-C-A 22487987-C-A P3_t2 **
13610966-C-A 11455290-C-A **
22321542-G-A 20159656-G-A DYZ19 **
9461959-G-T 9624350-G-T **
9440411-ATT-A 9602802-ATT-A 9×T**
7166601-C-CATAT 7298560-C-CATAT 20×AT**
10796478-C-A **
7642986-C-T 7774945-C-T **
10861211-C-T **
10861212-A-G **
10861239-TCCACC-T **
17804328-C-A 15692448-C-A **
6923146-C-A 7055105-C-A **
9438129-TG-T 9600520-TG-T **
17596497-C-A 15484617-C-A **
21391681-C-A 19229795-C-A **
14575916-G-T 12464116-G-T **
15396580-C-A 13284700-C-A **
21135173-C-A 18973287-C-A **
25849171-T-C 23703024-T-C P1_Y1 **
10845734-T-G **
13880921-C-A 11760215-C-A **
9870151-C-A 10032542-C-A **
5205287-A-AT 5337246-A-AT 9×T**
13935708-C-A 11815002-C-A **
22199397-C-A 20037511-C-A **
16506105-G-T 14394225-G-T **
56841888-G-T **
9603159-G-GT 9765550-G-GT IR3_Prx **
14397470-A-C 12276766-A-C **
23047685-G-T 20885799-G-T **
28157469-C-A 26011322-C-A P1_b4 **
10880029-G-A FT435270 **
10880038-C-CGGATA **
14859068-C-A 12747134-C-A **
17079054-T-G 14967174-T-G **
7420739-T-G 7552698-T-G **
23459711-C-A 21297825-C-A **
2817150-C-A 2949109-C-A **
23315869-C-A 21153983-C-A **
15478874-C-A 13366994-C-A Y93881 **
15450368-C-A 13338488-C-A **
14600440-C-A 12488640-C-A **
10946516-A-C **
21672311-C-A 19510425-C-A **
6779080-C-A 6911039-C-A **
15998875-C-A 13886995-C-A **
22901987-C-A 20740101-C-A **
15527871-T-A 13415991-T-A **
7385377-C-A 7517336-C-A **
10794866-C-A **
22810729-C-A 20648843-C-A **
14219767-GAA-G 12099061-GAA-G 11×A**
56828338-C-G **
14174624-C-A 12053918-C-A **
28590072-C-A 26443925-C-A **
13259051-C-A 11103375-C-A **
17327272-C-A 15215392-C-A **
7081230-C-A 7213189-C-A **
14424004-C-A 12303279-C-A **
56742630-T-G **
10999107-C-G **
14235913-C-A 12115207-C-A **
19246777-C-A 17134897-C-A **
16312357-G-T 14200477-G-T **
5957008-C-A 6088967-C-A **
13466079-AC-A 11310403-AC-A **
13466093-T-C 11310417-T-C **
13466096-TG-T 11310420-TG-T **
15358572-C-A 13246691-C-A **
14532163-T-C 12420364-T-C **
56714089-A-G **
14175071-C-A 12054365-C-A **
6736398-G-T 6868357-G-T **
28499517-C-A 26353370-C-A **
14151526-C-A 12030820-C-A **
22920712-C-A 20758826-C-A **
20958876-T-G 18796990-T-G P4_Dst **
4961557-G-T 5093516-G-T **
10763231-C-A **
17792247-C-A 15680367-C-A **
14581093-T-G 12469293-T-G **
20648577-GA-G 18486691-GA-G P4_Prx **
15271056-A-G 13159145-A-G **
15091744-C-A 12979833-C-A **
8785642-G-C 8917601-G-C **
7656651-C-A 7788610-C-A **
16648207-A-G 14536327-A-G **
22509495-C-A 20347609-C-A DYZ19 **
24013852-TA-T 21867705-TA-T **
10661799-C-A **
16666059-C-A 14554179-C-A **
17387342-C-A 15275462-C-A **
10946521-T-C **
10946526-C-T **
22820378-T-G 20658492-T-G **
2693401-A-G 2825360-A-G **
2693403-A-G 2825362-A-G **
2693406-A-AG 2825365-A-AG **
2750760-G-T 2882719-G-T **
2793031-G-T 2924990-G-T **
2881490-A-C 3013449-A-C **
2901468-T-C 3033427-T-C **
2906630-C-T 3038589-C-T **
2924097-T-C 3056056-T-C **
2928920-A-C 3060879-A-C **
2947951-T-G 3079910-T-G **
3051120-T-A 3183079-T-A **
3123270-A-G 3255229-A-G **
3123288-A-C 3255247-A-C **
3123304-T-C 3255263-T-C **
3123335-C-A 3255294-C-A **
3218566-C-A 3350525-C-A **
3386275-A-C 3518234-A-C **
3405446-G-T 3537405-G-T **
3492124-G-T 3624083-G-T **
3501057-G-C 3633016-G-C **
3578602-A-C 3710561-A-C **
3606311-C-A 3738270-C-A **
3609501-C-A 3741460-C-A **
3708443-T-C 3840402-T-C **
3725885-C-A 3857844-C-A **
3755628-G-T 3887587-G-T **
3757143-C-A 3889102-C-A **
3775079-A-T 3907038-A-T **
3850971-C-A 3982930-C-A **
3853720-A-C 3985679-A-C **
3856741-C-A 3988700-C-A **
3967040-G-C 4098999-G-C **
4007586-TA-T 4139545-TA-T **
4109217-T-G 4241176-T-G **
4216409-A-G 4348368-A-G **
4287877-C-T 4419836-C-T **
4374787-C-G 4506746-C-G **
4376425-T-G 4508384-T-G **
4384426-G-C 4516385-G-C **
4384446-G-T 4516405-G-T **
4439221-G-A 4571180-G-A **
4439622-G-A 4571581-G-A **
4444912-G-T 4576871-G-T FGC57450 **
4451606-C-A 4583565-C-A **
4470666-T-C 4602625-T-C **
4473001-C-A 4604960-C-A **
4482069-C-A 4614028-C-A **
4529258-A-T 4661217-A-T **
4561580-A-C 4693539-A-C **
4561607-A-C 4693566-A-C **
4561639-A-C 4693598-A-C **
4604467-C-T 4736426-C-T **
4616357-A-C 4748316-A-C **
4645958-A-T 4777917-A-T **
4662813-A-C 4794772-A-C **
4804479-G-T 4936438-G-T **
4807814-A-G 4939773-A-G **
4812646-C-A 4944605-C-A **
4902423-A-C 5034382-A-C **
4918363-C-A 5050322-C-A **
4919538-T-A 5051497-T-A **
4919571-C-G 5051530-C-G **
4919589-A-C 5051548-A-C **
4932108-G-T 5064067-G-T **
4945938-C-A 5077897-C-A **
4957728-C-A 5089687-C-A **
4995496-T-G 5127455-T-G **
4996315-C-G 5128274-C-G **
5059629-C-A 5191588-C-A **
5125629-C-G 5257588-C-G **
5125652-C-A 5257611-C-A **
5176425-C-A 5308384-C-A **
5200718-C-T 5332677-C-T **
5224653-C-T 5356612-C-T **
5242491-T-G 5374450-T-G **
5244546-A-C 5376505-A-C **
5244626-G-C 5376585-G-C **
5289165-C-A 5421124-C-A **
5293867-T-G 5425826-T-G **
5418309-C-T 5550268-C-T FGC82014 **
5449463-C-G 5581422-C-G **
5462178-T-G 5594137-T-G **
5462216-G-A 5594175-G-A **
5462228-A-G 5594187-A-G **
5462251-G-A 5594210-G-A **
5592110-G-T 5724069-G-T FT92981 **
5600868-C-G 5732827-C-G **
5601048-A-T 5733007-A-T **
5620596-C-A 5752555-C-A **
5633799-G-T 5765758-G-T **
5664443-T-A 5796402-T-A **
5664497-T-C 5796456-T-C **
5683974-C-T 5815933-C-T **
5755095-A-T 5887054-A-T **
5756830-A-C 5888789-A-C **
5795255-C-A 5927214-C-A **
5796687-A-T 5928646-A-T **
5817692-C-A 5949651-C-A **
5957046-C-A 6089005-C-A **
6039787-A-C 6171746-A-C **
6149697-A-G 6281656-A-G FTB32243 IR3_Dst **
6223464-A-G 6355423-A-G IR3_Dst **
6223597-G-T 6355556-G-T IR3_Dst **
6338903-C-A 6470862-C-A IR3_Dst **
6339054-A-C 6471013-A-C IR3_Dst **
6339071-G-T 6471030-G-T IR3_Dst **
6368894-A-C 6500853-A-C **
6510129-C-G 6642088-C-G **
6510532-A-C 6642491-A-C **
6512144-G-T 6644103-G-T **
6523643-A-C 6655602-A-C **
6596102-T-C 6728061-T-C **
6642832-C-G 6774791-C-G **
6644753-C-A 6776712-C-A **
6651421-G-T 6783380-G-T **
6674565-A-G 6806524-A-G **
6776007-C-T 6907966-C-T **
6809414-T-A 6941373-T-A **
6818965-A-C 6950924-A-C **
6865362-C-A 6997321-C-A **
6944096-A-G 7076055-A-G **
6957660-CT-C 7089619-CT-C **
6981132-A-C 7113091-A-C **
6996856-C-G 7128815-C-G **
7043411-G-A 7175370-G-A **
7045732-T-G 7177691-T-G **
7048147-C-A 7180106-C-A **
7048151-A-G 7180110-A-G **
7083876-C-A 7215835-C-A **
7088440-A-C 7220399-A-C **
7088572-C-A 7220531-C-A **
7098505-C-T 7230464-C-T **
7099828-A-C 7231787-A-C **
7107376-C-A 7239335-C-A **
7143919-C-T 7275878-C-T **
7143926-G-T 7275885-G-T **
7160437-G-A 7292396-G-A **
7182997-T-C 7314956-T-C **
7203842-A-T 7335801-A-T **
7237887-TC-T 7369846-TC-T **
7248091-A-C 7380050-A-C **
7259099-C-G 7391058-C-G **
7259127-T-G 7391086-T-G **
7277590-C-T 7409549-C-T **
7299646-C-T 7431605-C-T **
7316586-C-T 7448545-C-T **
7331183-G-T 7463142-G-T **
7335665-G-C 7467624-G-C **
7336212-TTAGG-T 7468171-TTAGG-T **
7343492-G-T 7475451-G-T **
7363394-C-T 7495353-C-T **
7378709-G-T 7510668-G-T **
7390059-T-C 7522018-T-C **
7420756-T-G 7552715-T-G **
7424894-C-A 7556853-C-A **
7425271-C-A 7557230-C-A **
7462692-T-G 7594651-T-G IR1_L **
7541057-G-T 7673016-G-T **
7567789-A-G 7699748-A-G **
7617716-C-A 7749675-C-A **
7709471-T-C 7841430-T-C **
7774989-T-G 7906948-T-G **
7862091-T-G 7994050-T-G **
7869143-T-C 8001102-T-C **
8043155-C-A 8175114-C-A **
8056595-T-C 8188554-T-C **
8073357-A-G 8205316-A-G **
8080115-A-C 8212074-A-C **
8154193-C-A 8286152-C-A **
8216414-T-C 8348373-T-C **
8216468-G-A 8348427-G-A **
8371751-A-G 8503710-A-G **
8563767-G-T 8695726-G-T **
8669652-C-T 8801611-C-T **
8736883-C-A 8868842-C-A **
8768605-G-A 8900564-G-A **
8793047-G-C 8925006-G-C **
8811564-C-A 8943523-C-A **
8854217-A-C 8986176-A-C **
8888401-G-TT 9020360-G-TT **
9113001-A-C **
8974317-A-G 9136708-A-G **
9047212-T-C 9209603-T-C **
9048142-A-T 9210533-A-T **
9055371-CT-C 9217762-CT-C **
9076585-C-G 9238976-C-G **
9141885-G-T 9304276-G-T **
9373038-T-C 9535429-T-C **
9436827-C-A 9599218-C-A **
9498891-T-C 9661282-T-C **
9675016-T-A 9837407-T-A IR3_Prx **
9771088-C-A 9933479-C-A **
9830572-G-T 9992963-G-T **
9830857-C-A 9993248-C-A **
9952156-A-G 10114547-A-G **
9965164-A-C 10127555-A-C **
9965191-A-C 10127582-A-C **
9978475-A-G 10140866-A-G **
9993573-C-T 10155964-C-T **
10013937-C-T 10176328-C-T **
10034337-C-T 10196728-C-T **
10037944-C-A 10200335-C-A **
10038005-T-C 10200396-T-C **
10630486-T-A **
10630497-T-G **
10630509-C-A **
10630558-C-A **
10630574-C-G **
10664677-C-A **
10671191-T-C **
10677896-T-G **
10686193-A-G **
10688535-T-G **
10688560-T-G **
10690937-G-T **
10692074-TCATTC-T **
10752449-C-G **
10758835-G-T FTB69970 **
10765041-C-A **
10767981-C-A **
10771259-T-C **
10771264-T-C **
10771266-C-T **
10771271-C-T **
10771276-C-T **
10771281-C-T **
10771286-T-A **
10771288-T-C **
10771289-CGTTCA-C **
10771300-G-A **
10771310-A-G **
10771313-T-C **
10772916-T-G **
10772956-T-G **
10772982-T-G **
10773448-T-G **
10774671-C-T **
10778384-T-C **
10778851-T-C **
10782311-C-A **
10791149-T-G **
10792160-C-A **
10807911-T-G **
10815494-T-G **
10820916-T-A **
10845741-C-G **
10852393-C-A **
10869237-G-C **
10870581-C-A **
10872775-C-T **
10882820-A-C **
10909642-A-C **
10917921-G-T **
10946394-C-A **
10946529-C-T **
10950996-C-A **
10954131-C-A FT63760 **
10968217-T-G **
10976478-C-A **
10982736-C-A **
10994263-T-C **
13206472-A-C 11050796-A-C **
13216363-C-T 11060687-C-T **
13240483-G-A 11084807-G-A **
13245447-C-A 11089771-C-A **
13259965-G-T 11104289-G-T **
13287321-C-T 11131645-C-T **
13298530-A-C 11142854-A-C **
13311039-C-T 11155363-C-T **
13445814-C-A 11290138-C-A **
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13488814-C-A 11333138-C-A **
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13587748-G-T 11432072-G-T **
13591648-T-G 11435972-T-G **
13643391-A-C 11487715-A-C **
11643965-A-G **
11662798-G-T **
11663370-T-G **
11663440-T-C **
11675770-G-A **
13799187-A-G 11678481-A-G **
13860627-A-C 11739921-A-C **
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13938589-G-A 11817883-G-A **
13946146-T-G 11825440-T-G **
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13990021-C-A 11869315-C-A **
13996058-C-A 11875352-C-A **
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14027334-T-C 11906628-T-C **
14090002-C-A 11969296-C-A **
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14161211-G-A 12040505-G-A Y66069 **
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14229903-G-A 12109197-G-A **
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14246902-C-A 12126196-C-A **
14296432-C-A 12175726-C-A **
14301688-A-T 12180982-A-T **
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14475861-C-A 12355130-C-A **
12370814-C-A **
14495703-C-T 12383900-C-T **
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14960231-G-T 12848306-G-T **
15106363-A-G 12994451-A-G **
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15276531-G-C 13164620-G-C **
15315343-A-T 13203448-A-T **
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15476361-C-A 13364481-C-A **
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15585142-C-A 13473262-C-A **
15657125-T-TA 13545245-T-TA 8×A**
15658036-C-A 13546156-C-A **
15671104-GT-G 13559224-GT-G **
15685287-A-C 13573407-A-C **
15717169-T-C 13605289-T-C Y51039 **
15743571-C-A 13631691-C-A **
15744102-T-A 13632222-T-A **
15764138-A-G 13652258-A-G **
15764165-T-G 13652285-T-G **
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15791354-A-T 13679474-A-T **
15862589-G-C 13750709-G-C **
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15862593-C-T 13750713-C-T **
15905944-T-C 13794064-T-C **
15909267-A-T 13797387-A-T **
15912118-G-T 13800238-G-T **
15941470-G-T 13829590-G-T **
15950485-C-T 13838605-C-T **
15950488-G-A 13838608-G-A **
15950490-C-T 13838610-C-T FTA50231 **
15985725-A-T 13873845-A-T **
16016942-A-C 13905062-A-C **
16020858-A-C 13908978-A-C **
16020883-T-C 13909003-T-C **
16020900-T-C 13909020-T-C **
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16044118-G-A 13932238-G-A **
16044122-A-C 13932242-A-C **
16046842-T-G 13934962-T-G **
16047127-T-G 13935247-T-G **
16048971-G-T 13937091-G-T **
16134616-C-A 14022736-C-A **
16157745-A-AAAAG 14045865-A-AAAAG P8_Dst **
16180944-CA-C 14069064-CA-C **
16181365-T-C 14069485-T-C **
16210938-T-G 14099058-T-G **
16272326-G-C 14160446-G-C **
16297376-T-G 14185496-T-G **
16297380-T-G 14185500-T-G **
16305893-C-G 14194013-C-G **
16305895-A-G 14194015-A-G **
16422784-A-G 14310904-A-G **
16427617-A-C 14315737-A-C **
16503678-C-T 14391798-C-T **
16574986-G-T 14463106-G-T **
16607476-G-A 14495596-G-A **
16631587-G-C 14519707-G-C **
16687630-C-A 14575750-C-A **
16703611-G-C 14591731-G-C **
16706250-A-C 14594370-A-C **
16829048-C-G 14717168-C-G **
16921482-C-A 14809602-C-A **
16930824-C-A 14818944-C-A **
16944885-A-C 14833005-A-C **
16981335-G-C 14869455-G-C **
16987381-T-G 14875501-T-G **
16987811-A-G 14875931-A-G **
16998740-C-A 14886860-C-A **
17018844-C-A 14906964-C-A **
17064806-G-C 14952926-G-C **
17070893-T-A 14959013-T-A **
17098301-C-A 14986421-C-A FT139372 **
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17161699-G-C 15049819-G-C **
17181842-T-C 15069962-T-C **
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17491880-A-G 15380000-A-G FT293874 **
17552044-C-A 15440164-C-A **
17588960-G-T 15477080-G-T **
17616877-C-A 15504997-C-A FTA40377 **
17628629-T-G 15516749-T-G **
17628763-G-A 15516883-G-A **
17628935-C-A 15517055-C-A **
17632597-C-A 15520717-C-A **
17653956-C-G 15542076-C-G **
17657978-T-C 15546098-T-C **
17668492-C-A 15556612-C-A **
17702617-T-G 15590737-T-G **
17848704-C-A 15736824-C-A **
17850173-T-G 15738293-T-G **
17913027-T-A 15801147-T-A **
17913047-G-A 15801167-G-A **
17942267-A-G 15830387-A-G **
17965378-A-C 15853498-A-C **
18003243-T-G 15891363-T-G P7_Gap **
18022563-C-A 15910683-C-A **
18136675-C-A 16024795-C-A **
18228837-G-C 16116957-G-C **
18382115-C-A 16270235-C-A P6_Gap **
18401548-C-A 16289668-C-A P6_Gap **
18440420-A-AAC 16328540-A-AAC P6_Dst **
18540067-A-C 16428187-A-C **
18544842-G-T 16432962-G-T **
18554347-T-A 16442467-T-A **
18653354-G-T 16541474-G-T **
18687563-G-A 16575683-G-A **
18688304-A-C 16576424-A-C **
18750274-A-T 16638394-A-T **
18751039-T-A 16639159-T-A FGC37781 **
18767786-T-G 16655906-T-G **
18779360-G-A 16667480-G-A **
18789782-A-C 16677902-A-C **
18816827-C-A 16704947-C-A **
18819512-G-C 16707632-G-C **
18845866-C-A 16733986-C-A **
18892436-C-A 16780556-C-A **
18895544-T-C 16783664-T-C **
18905518-T-G 16793638-T-G **
18908066-A-T 16796186-A-T **
18937273-G-C 16825393-G-C **
19007738-C-A 16895858-C-A **
19063009-G-T 16951129-G-T **
19072618-A-C 16960738-A-C **
19088500-CA-C 16976620-CA-C **
19168754-T-A 17056874-T-A **
19246776-C-G 17134896-C-G **
19248808-T-G 17136928-T-G **
19248839-T-G 17136959-T-G **
19297173-G-C 17185293-G-C **
19425778-T-A 17313898-T-A **
19460137-C-A 17348257-C-A **
19531387-C-G 17419507-C-G **
19539632-T-C 17427752-T-C **
19544180-C-T 17432300-C-T **
19600470-A-T 17488590-A-T P5_Prx **
19774517-C-A 17662637-C-A P5_Prx **
19815667-T-TG 17703787-T-TG P5_Prx **
19900608-T-G 17788728-T-G P5_Prx **
19900624-T-C 17788744-T-C P5_Prx **
19900626-T-C 17788746-T-C P5_Prx **
19900638-A-T 17788758-A-T P5_Prx **
19900653-G-C 17788773-G-C P5_Prx **
20000142-A-C 17888262-A-C P5_Prx **
20000157-A-C 17888277-A-C P5_Prx **
20000189-A-C 17888309-A-C P5_Prx **
20000191-A-C 17888311-A-C P5_Prx **
20000203-T-C 17888323-T-C P5_Prx **
20640327-TGCCA-T 18478441-TGCCA-T P4_Prx **
20693586-T-A 18531700-T-A P4_Prx **
20773810-T-C 18611924-T-C P4_Prx **
21042099-T-A 18880213-T-A **
21042136-T-A 18880250-T-A **
21110076-A-T 18948190-A-T **
21177043-CAA-C 19015157-CAA-C 11×A**
21207082-T-A 19045196-T-A **
21268231-T-C 19106345-T-C **
21315144-T-C 19153258-T-C **
21361883-T-C 19199997-T-C **
21361893-A-C 19200007-A-C **
21371283-C-T 19209397-C-T 10×T**
21380870-G-T 19218984-G-T **
21393457-T-G 19231571-T-G **
21394578-C-A 19232692-C-A **
21477028-T-A 19315142-T-A **
21497031-T-G 19335145-T-G **
21500366-C-A 19338480-C-A **
21511301-A-C 19349415-A-C **
21678802-A-G 19516916-A-G **
21807279-C-A 19645393-C-A **
21832420-C-T 19670534-C-T **
21834146-A-T 19672260-A-T **
21834157-T-G 19672271-T-G **
21834163-A-G 19672277-A-G **
21958766-C-G 19796880-C-G **
21969461-A-G 19807575-A-G **
22010420-T-C 19848534-T-C **
22013145-G-T 19851259-G-T **
22060388-T-G 19898502-T-G **
22075777-A-C 19913891-A-C **
22080822-A-G 19918936-A-G **
22226594-T-C 20064708-T-C DYZ19 **
22226611-C-T 20064725-C-T DYZ19 **
22226628-G-C 20064742-G-C DYZ19 **
22226655-A-C 20064769-A-C DYZ19 **
22226656-A-C 20064770-A-C BY1833 DYZ19 **
22226667-A-T 20064781-A-T DYZ19 **
22260683-T-C 20098797-T-C DYZ19 **
22612000-G-A 20450114-G-A **
22623874-C-A 20461988-C-A **
22660913-G-T 20499027-G-T **
22690830-C-T 20528944-C-T **
22774883-T-C 20612997-T-C **
22804101-C-A 20642215-C-A **
22994896-C-A 20833010-C-A **
23005326-T-C 20843440-T-C **
23019990-A-T 20858104-A-T **
23045455-G-T 20883569-G-T **
23047656-G-T 20885770-G-T **
23047667-T-G 20885781-T-G **
23055993-G-T 20894107-G-T **
23065484-T-G 20903598-T-G **
23066976-C-A 20905090-C-A **
23082126-C-A 20920240-C-A **
23084151-T-G 20922265-T-G **
23084158-T-G 20922272-T-G **
23104681-A-G 20942795-A-G **
23152671-A-T 20990785-A-T **
23267253-G-T 21105367-G-T **
23340676-A-T 21178790-A-T **
23340762-T-C 21178876-T-C **
23389596-C-A 21227710-C-A **
23391617-C-G 21229731-C-G **
23476235-G-A 21314349-G-A **
23734347-G-T 21572461-G-T 5×GCA**
23875353-A-C 21713467-A-C **
23875383-C-A 21713497-C-A **
24373244-C-A 22227097-C-A **
24402482-T-C 22256335-T-C **
24877189-A-C 22731042-A-C g1 **
25849243-A-T 23703096-A-T P1_Y1 **
25966171-T-G 23820024-T-G P1_Y1 **
25966184-T-A 23820037-T-A P1_Y1 **
25966193-G-T 23820046-G-T P1_Y1 **
25985538-A-C 23839391-A-C P1_Y1 **
26379163-A-C 24233016-A-C P1_Y1 **
27523364-A-T 25377217-A-T P1_Y2 **
27861627-T-G 25715480-T-G P1_Y2 **
28170052-C-G 26023905-C-G P1_b4 **
28170066-C-A 26023919-C-A P1_b4 **
28369913-C-T 26223766-C-T P1_gr2 **
28390992-C-A 26244845-C-A P1_gr2 **
28480345-A-C 26334198-A-C **
28504637-A-G 26358490-A-G **
28507671-T-G 26361524-T-G **
28532137-A-G 26385990-A-G **
28562415-C-A 26416268-C-A **
28580313-C-A 26434166-C-A **
28600539-T-G 26454392-T-G **
28608449-A-T 26462302-A-T **
28611691-T-G 26465544-T-G **
28611710-T-G 26465563-T-G **
28614652-A-C 26468505-A-C **
28614696-G-A 26468549-G-A **
28622011-G-T 26475864-G-T **
28622715-C-A 26476568-C-A **
28633555-C-A 26487408-C-A **
28636191-C-A 26490044-C-A **
28705175-A-C 26559028-A-C **
28705193-A-C 26559046-A-C **
28716292-C-A 26570145-C-A **
28731074-T-G 26584927-T-G **
28733419-G-T 26587272-G-T **
28734317-G-T 26588170-G-T **
28739881-C-A 26593734-C-A **
28767214-C-A 26621067-C-A FGC51264 **
28778950-A-G 26632803-A-G **
28779005-A-T 26632858-A-T **
56714107-G-T **
56841913-T-A **
56854461-A-G **
56854785-TG-T **
13433681-G-C 11278005-G-C ***
13850547-C-A 11729841-C-A 7×ATGGA***
10024072-C-G 10186463-C-G ***
13825295-A-T 11704589-A-T ***
13818726-T-A 11698020-T-A ***
15744252-G-A 13632372-G-A L162PF5624 CTS4640 ******
22360561-G-C 20198675-G-C DYZ19 ***
22447313-G-A 20285427-G-A DYZ19 ***
24958548-A-T 22812401-A-T g1 ***
21663277-AG-A 19501391-AG-A ***
15276922-C-A 13165011-C-A ***
22926153-CTTT-C 20764267-CTTT-C 13×T***
14331131-CTTTTT-C 12210425-CTTTTT-C 25×T***
15967476-C-A 13855596-C-A ***
10825268-T-A ***
17459485-C-A 15347605-C-A 25×A***
13850565-G-GAACTT 11729859-G-GAACTT ***
13850553-A-C 11729847-A-C ***
13850564-T-A 11729858-T-A ***
15527930-C-A 13416050-C-A ***
16539611-C-A 14427731-C-A ***
21390778-C-A 19228892-C-A ***
13458721-C-T 11303045-C-T ***
13458732-A-G 11303056-A-G ***
17375794-G-T 15263914-G-T ***
10785269-A-G ***
10683374-C-A FT428900 ***
23377270-C-A 21215384-C-A ***
19061412-C-A 16949532-C-A ***
15584866-C-T 13472986-C-T BY190780 ***
13478257-G-A,C 11322581-G-A,C ***
8401083-CAA-C,CA 8533042-CAA-C,CA 14×A***
24446741-C-A 22300594-C-A ***
10772612-G-T ***
6513330-C-A 6645289-C-A ***
2768175-A-G 2900134-A-G ***
2768190-GA-G 2900149-GA-G ***
6669389-GT-G 6801348-GT-G 10×T***
7168587-C-A 7300546-C-A ***
7172087-G-A 7304046-G-A ***
7386412-C-A 7518371-C-A ***
8501508-C-T 8633467-C-T ***
8852629-C-A 8984588-C-A ***
10668611-C-A ***
10895812-T-A,G ***
13196272-C-A 11040596-C-A ***
13219944-C-A 11064268-C-A ***
13452431-C-T 11296755-C-T ***
13453198-CGG-C 11297522-CGG-C ***
13453204-CA-C,GA 11297528-CA-C,GA ***
13453207-TCAA-T 11297531-TCAA-T ***
14180811-G-C 12060105-G-C ***
14479435-C-A 12358704-C-A ***
15126646-A-T 13014733-A-T ***
15722744-GC-G 13610864-GC-G ***
16909178-CTTTT-C,CTTT 14797298-CTTTT-C,CTTT 16×T***
17090552-C-A 14978672-C-A ***
17302274-C-G 15190394-C-G ***
18158696-A-G 16046816-A-G ***
18901319-C-A 16789439-C-A ***
18906102-C-A 16794222-C-A ***
19040231-T-G 16928351-T-G ***
19124286-G-T 17012406-G-T ***
19213270-C-A 17101390-C-A ***
19319739-C-A 17207859-C-A ***
21201472-C-A 19039586-C-A ***
21556761-C-A 19394875-C-A ***
21773765-TAG-T 19611879-TAG-T ***
22629607-G-A 20467721-G-A ***
22629622-C-G 20467736-C-G ***
24205465-C-T 22059318-C-T P3_b1 ***
27216728-C-T 25070581-C-T P1_g3 ***
28570124-C-A 26423977-C-A ***
28622347-A-G 26476200-A-G ***
56826877-GAGACTGTACT-G,GGACTGTACT ***
56830306-T-G ***
56830311-G-GCCATTCCACT ***

In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.

For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.

The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.

The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.