McCarthy
FTDNA: 177666, BigY2: 177666MDKA Birth:

Tree Position
Unique Mutations
The mutations unique to this man are summarized in the table below. Those with a '+' or '*' confidence level are considered by FamilyTreeDNA or FullGenomesCorp to be high quality SNPs/INDELs. For completeness, all other mutations of lesser confidence are included as well. These additional mutations may be useful for distinguishing between very closely related men.
Occasionally, some of the mutations listed here will be thought to be shared with other men in which case they might appear in upstream blocks on the tree. When this happens, the 'Blocks' field will indicate what block they appear in. Such a situation might arise with BigY men if the BED data suggests another man may be positive for a SNP, even though it doesn't appear in his VCF data. It might also happen if Chromo2 testing or Sanger sequencing of other men not on the tree show the SNP to be shared.
POS-REF-ALT (hg19) | POS-REF-ALT (hg38) | Blocks | Names | Region | McDonald BED | combBED | STR | FTDNA 177666 | BigY2 177666 |
---|---|---|---|---|---|---|---|---|---|
7324082-T-C | 7456041-T-C | BY64561 | Y | Y | + | + | |||
14838721-C-T | 12726788-C-T | BY97912 | Y | Y | + | + | |||
8600023-C-T | 8731982-C-T | ** | |||||||
4389400-C-T | 4521359-C-T | ** | |||||||
22321549-T-A | 20159663-T-A | FGC22202 | DYZ19 | ** | |||||
7134659-C-T | 7266618-C-T | F912 | ** | ** | |||||
6402667-C-A | 6534626-C-A | ** | |||||||
58858932-C-T | 56731939-G-A | S3129 | ** | ||||||
16157735-G-GA | 14045855-G-GA | P8_Dst | 10×AAAGA | ** | |||||
14463322-C-A | 12342595-C-A | ** | |||||||
2763696-C-A | 2895655-C-A | ** | |||||||
28778852-C-T | 26632705-C-T | FT461597 | 33×T | ** | |||||
22321558-G-C | 20159672-G-C | DYZ19 | ** | ||||||
7197431-C-A | 7329390-C-A | ** | |||||||
7567782-G-A | 7699741-G-A | ** | |||||||
23435703-TG-T | 21273817-TG-T | ** | |||||||
7567779-G-T | 7699738-G-T | ** | |||||||
10992308-T-C | ** | ||||||||
21515860-C-T | 19353974-C-T | ** | |||||||
13466113-T-A | 11310437-T-A | ** | |||||||
13466119-T-C | 11310443-T-C | ** | |||||||
28812347-A-C | 26666200-A-C | ** | |||||||
3271825-A-T | 3403784-A-T | ** | |||||||
21946446-T-A | 19784560-T-A | ** | |||||||
10964803-A-T | ** | ||||||||
23274738-GCT-G | 21112852-GCT-G | ** | |||||||
10685780-T-A | ** | ||||||||
19508241-C-A | 17396361-C-A | ** | |||||||
15904145-A-C | 13792265-A-C | ** | |||||||
19226615-C-A | 17114735-C-A | ** | |||||||
13255714-C-A | 11100038-C-A | ** | |||||||
15209275-C-A | 13097361-C-A | ** | |||||||
10964867-C-A | ** | ||||||||
13480634-C-A | 11324958-C-A | ** | |||||||
10992736-C-A | ** | ||||||||
28812356-G-C | 26666209-G-C | ** | |||||||
30964-C-A | ** | ||||||||
56732022-A-G | ** | ||||||||
10940528-C-A | ** | ||||||||
7269786-C-A | 7401745-C-A | ** | |||||||
28521206-C-A | 26375059-C-A | ** | |||||||
21742660-G-T | 19580774-G-T | ** | |||||||
14554395-C-A | 12442596-C-A | ** | |||||||
56714095-T-TCTTCC | ** | ||||||||
56714132-G-C | ** | ||||||||
21000914-T-TAG | 18839028-T-TAG | P4_Dst | ** | ||||||
10826861-C-T | ** | ||||||||
15198645-C-A | 13086731-C-A | ** | |||||||
10826846-T-C | ** | ||||||||
28724787-C-A | 26578640-C-A | ** | |||||||
16305817-T-A | 14193937-T-A | ** | |||||||
17313537-T-G | 15201657-T-G | ** | |||||||
16474685-C-A | 14362805-C-A | ** | |||||||
15683671-C-A | 13571791-C-A | ** | |||||||
7643157-C-A | 7775116-C-A | ** | |||||||
14527703-C-A | 12415904-C-A | ** | |||||||
14445574-C-A | 12324847-C-A | ** | |||||||
22777028-A-C | 20615142-A-C | ** | |||||||
27733795-G-T | 25587648-G-T | P1_Y2 | ** | ||||||
23350660-C-A | 21188774-C-A | ** | |||||||
13919208-CAAAAA-C | 11798502-CAAAAA-C | 17×A | ** | ||||||
28583132-G-T | 26436985-G-T | ** | |||||||
14694838-C-A | 12582904-C-A | ** | |||||||
13327143-C-A | 11171467-C-A | ** | |||||||
19932026-T-C | 17820146-T-C | P5_Prx | ** | ||||||
22218876-C-A | 20056990-C-A | DYZ19 | ** | ||||||
28659485-C-A | 26513338-C-A | ** | |||||||
28534539-C-A | 26388392-C-A | ** | |||||||
24112763-C-A | 21966616-C-A | P3_b1 | ** | ||||||
21346379-C-A | 19184493-C-A | ** | |||||||
24472465-G-T | 22326318-G-T | ** | |||||||
10950412-C-T | ** | ||||||||
8253626-C-A | 8385585-C-A | ** | |||||||
7385341-C-A | 7517300-C-A | ** | |||||||
28480327-A-C | 26334180-A-C | ** | |||||||
19146599-A-G | 17034719-A-G | ** | |||||||
14195886-A-C | 12075180-A-C | ** | |||||||
3061150-C-A | 3193109-C-A | ** | |||||||
15532549-C-A | 13420669-C-A | ** | |||||||
24472458-T-C | 22326311-T-C | ** | |||||||
19318120-A-C | 17206240-A-C | ** | |||||||
14464331-A-ATT | 12343604-A-ATT | 13×T | ** | ||||||
10802286-C-A | ** | ||||||||
20300959-C-A | 18139073-C-A | P5_Dst | ** | ||||||
10885860-C-A | ** | ||||||||
7383709-T-C | 7515668-T-C | ** | |||||||
7139194-C-A | 7271153-C-A | ** | |||||||
10973890-AT-A | ** | ||||||||
18565050-A-G | 16453170-A-G | ** | |||||||
5017582-C-A | 5149541-C-A | ** | |||||||
3965254-C-A | 4097213-C-A | ** | |||||||
10975792-A-T | ** | ||||||||
21623841-G-A | 19461955-G-A | ** | |||||||
18662413-C-A | 16550533-C-A | ** | |||||||
11017523-C-A | ** | ||||||||
21266674-C-A | 19104788-C-A | ** | |||||||
7201629-C-T | 7333588-C-T | ** | |||||||
17346379-C-A | 15234499-C-A | ** | |||||||
10975804-T-A | ** | ||||||||
10975807-T-C | ** | ||||||||
10975822-A-T | ** | ||||||||
10975827-A-AATCCT | ** | ||||||||
16015236-C-A | 13903356-C-A | ** | |||||||
10864735-C-A | ** | ||||||||
28555653-C-A | 26409506-C-A | ** | |||||||
4898111-C-A | 5030070-C-A | ** | |||||||
15987399-C-A | 13875519-C-A | ** | |||||||
4957178-C-A | 5089137-C-A | ** | |||||||
10773452-C-A | ** | ||||||||
11662897-C-A | ** | ||||||||
17567340-C-A | 15455460-C-A | ** | |||||||
24634134-C-A | 22487987-C-A | P3_t2 | ** | ||||||
13610966-C-A | 11455290-C-A | ** | |||||||
22321542-G-A | 20159656-G-A | DYZ19 | ** | ||||||
9461959-G-T | 9624350-G-T | ** | |||||||
9440411-ATT-A | 9602802-ATT-A | 9×T | ** | ||||||
7166601-C-CATAT | 7298560-C-CATAT | 20×AT | ** | ||||||
10796478-C-A | ** | ||||||||
7642986-C-T | 7774945-C-T | ** | |||||||
10861211-C-T | ** | ||||||||
10861212-A-G | ** | ||||||||
10861239-TCCACC-T | ** | ||||||||
17804328-C-A | 15692448-C-A | ** | |||||||
6923146-C-A | 7055105-C-A | ** | |||||||
9438129-TG-T | 9600520-TG-T | ** | |||||||
17596497-C-A | 15484617-C-A | ** | |||||||
21391681-C-A | 19229795-C-A | ** | |||||||
14575916-G-T | 12464116-G-T | ** | |||||||
15396580-C-A | 13284700-C-A | ** | |||||||
21135173-C-A | 18973287-C-A | ** | |||||||
25849171-T-C | 23703024-T-C | P1_Y1 | ** | ||||||
10845734-T-G | ** | ||||||||
13880921-C-A | 11760215-C-A | ** | |||||||
9870151-C-A | 10032542-C-A | ** | |||||||
5205287-A-AT | 5337246-A-AT | 9×T | ** | ||||||
13935708-C-A | 11815002-C-A | ** | |||||||
22199397-C-A | 20037511-C-A | ** | |||||||
16506105-G-T | 14394225-G-T | ** | |||||||
56841888-G-T | ** | ||||||||
9603159-G-GT | 9765550-G-GT | IR3_Prx | ** | ||||||
14397470-A-C | 12276766-A-C | ** | |||||||
23047685-G-T | 20885799-G-T | ** | |||||||
28157469-C-A | 26011322-C-A | P1_b4 | ** | ||||||
10880029-G-A | FT435270 | ** | |||||||
10880038-C-CGGATA | ** | ||||||||
14859068-C-A | 12747134-C-A | ** | |||||||
17079054-T-G | 14967174-T-G | ** | |||||||
7420739-T-G | 7552698-T-G | ** | |||||||
23459711-C-A | 21297825-C-A | ** | |||||||
2817150-C-A | 2949109-C-A | ** | |||||||
23315869-C-A | 21153983-C-A | ** | |||||||
15478874-C-A | 13366994-C-A | Y93881 | ** | ||||||
15450368-C-A | 13338488-C-A | ** | |||||||
14600440-C-A | 12488640-C-A | ** | |||||||
10946516-A-C | ** | ||||||||
21672311-C-A | 19510425-C-A | ** | |||||||
6779080-C-A | 6911039-C-A | ** | |||||||
15998875-C-A | 13886995-C-A | ** | |||||||
22901987-C-A | 20740101-C-A | ** | |||||||
15527871-T-A | 13415991-T-A | ** | |||||||
7385377-C-A | 7517336-C-A | ** | |||||||
10794866-C-A | ** | ||||||||
22810729-C-A | 20648843-C-A | ** | |||||||
14219767-GAA-G | 12099061-GAA-G | 11×A | ** | ||||||
56828338-C-G | ** | ||||||||
14174624-C-A | 12053918-C-A | ** | |||||||
28590072-C-A | 26443925-C-A | ** | |||||||
13259051-C-A | 11103375-C-A | ** | |||||||
17327272-C-A | 15215392-C-A | ** | |||||||
7081230-C-A | 7213189-C-A | ** | |||||||
14424004-C-A | 12303279-C-A | ** | |||||||
56742630-T-G | ** | ||||||||
10999107-C-G | ** | ||||||||
14235913-C-A | 12115207-C-A | ** | |||||||
19246777-C-A | 17134897-C-A | ** | |||||||
16312357-G-T | 14200477-G-T | ** | |||||||
5957008-C-A | 6088967-C-A | ** | |||||||
13466079-AC-A | 11310403-AC-A | ** | |||||||
13466093-T-C | 11310417-T-C | ** | |||||||
13466096-TG-T | 11310420-TG-T | ** | |||||||
15358572-C-A | 13246691-C-A | ** | |||||||
14532163-T-C | 12420364-T-C | ** | |||||||
56714089-A-G | ** | ||||||||
14175071-C-A | 12054365-C-A | ** | |||||||
6736398-G-T | 6868357-G-T | ** | |||||||
28499517-C-A | 26353370-C-A | ** | |||||||
14151526-C-A | 12030820-C-A | ** | |||||||
22920712-C-A | 20758826-C-A | ** | |||||||
20958876-T-G | 18796990-T-G | P4_Dst | ** | ||||||
4961557-G-T | 5093516-G-T | ** | |||||||
10763231-C-A | ** | ||||||||
17792247-C-A | 15680367-C-A | ** | |||||||
14581093-T-G | 12469293-T-G | ** | |||||||
20648577-GA-G | 18486691-GA-G | P4_Prx | ** | ||||||
15271056-A-G | 13159145-A-G | ** | |||||||
15091744-C-A | 12979833-C-A | ** | |||||||
8785642-G-C | 8917601-G-C | ** | |||||||
7656651-C-A | 7788610-C-A | ** | |||||||
16648207-A-G | 14536327-A-G | ** | |||||||
22509495-C-A | 20347609-C-A | DYZ19 | ** | ||||||
24013852-TA-T | 21867705-TA-T | ** | |||||||
10661799-C-A | ** | ||||||||
16666059-C-A | 14554179-C-A | ** | |||||||
17387342-C-A | 15275462-C-A | ** | |||||||
10946521-T-C | ** | ||||||||
10946526-C-T | ** | ||||||||
22820378-T-G | 20658492-T-G | ** | |||||||
2693401-A-G | 2825360-A-G | ** | |||||||
2693403-A-G | 2825362-A-G | ** | |||||||
2693406-A-AG | 2825365-A-AG | ** | |||||||
2750760-G-T | 2882719-G-T | ** | |||||||
2793031-G-T | 2924990-G-T | ** | |||||||
2881490-A-C | 3013449-A-C | ** | |||||||
2901468-T-C | 3033427-T-C | ** | |||||||
2906630-C-T | 3038589-C-T | ** | |||||||
2924097-T-C | 3056056-T-C | ** | |||||||
2928920-A-C | 3060879-A-C | ** | |||||||
2947951-T-G | 3079910-T-G | ** | |||||||
3051120-T-A | 3183079-T-A | ** | |||||||
3123270-A-G | 3255229-A-G | ** | |||||||
3123288-A-C | 3255247-A-C | ** | |||||||
3123304-T-C | 3255263-T-C | ** | |||||||
3123335-C-A | 3255294-C-A | ** | |||||||
3218566-C-A | 3350525-C-A | ** | |||||||
3386275-A-C | 3518234-A-C | ** | |||||||
3405446-G-T | 3537405-G-T | ** | |||||||
3492124-G-T | 3624083-G-T | ** | |||||||
3501057-G-C | 3633016-G-C | ** | |||||||
3578602-A-C | 3710561-A-C | ** | |||||||
3606311-C-A | 3738270-C-A | ** | |||||||
3609501-C-A | 3741460-C-A | ** | |||||||
3708443-T-C | 3840402-T-C | ** | |||||||
3725885-C-A | 3857844-C-A | ** | |||||||
3755628-G-T | 3887587-G-T | ** | |||||||
3757143-C-A | 3889102-C-A | ** | |||||||
3775079-A-T | 3907038-A-T | ** | |||||||
3850971-C-A | 3982930-C-A | ** | |||||||
3853720-A-C | 3985679-A-C | ** | |||||||
3856741-C-A | 3988700-C-A | ** | |||||||
3967040-G-C | 4098999-G-C | ** | |||||||
4007586-TA-T | 4139545-TA-T | ** | |||||||
4109217-T-G | 4241176-T-G | ** | |||||||
4216409-A-G | 4348368-A-G | ** | |||||||
4287877-C-T | 4419836-C-T | ** | |||||||
4374787-C-G | 4506746-C-G | ** | |||||||
4376425-T-G | 4508384-T-G | ** | |||||||
4384426-G-C | 4516385-G-C | ** | |||||||
4384446-G-T | 4516405-G-T | ** | |||||||
4439221-G-A | 4571180-G-A | ** | |||||||
4439622-G-A | 4571581-G-A | ** | |||||||
4444912-G-T | 4576871-G-T | FGC57450 | ** | ||||||
4451606-C-A | 4583565-C-A | ** | |||||||
4470666-T-C | 4602625-T-C | ** | |||||||
4473001-C-A | 4604960-C-A | ** | |||||||
4482069-C-A | 4614028-C-A | ** | |||||||
4529258-A-T | 4661217-A-T | ** | |||||||
4561580-A-C | 4693539-A-C | ** | |||||||
4561607-A-C | 4693566-A-C | ** | |||||||
4561639-A-C | 4693598-A-C | ** | |||||||
4604467-C-T | 4736426-C-T | ** | |||||||
4616357-A-C | 4748316-A-C | ** | |||||||
4645958-A-T | 4777917-A-T | ** | |||||||
4662813-A-C | 4794772-A-C | ** | |||||||
4804479-G-T | 4936438-G-T | ** | |||||||
4807814-A-G | 4939773-A-G | ** | |||||||
4812646-C-A | 4944605-C-A | ** | |||||||
4902423-A-C | 5034382-A-C | ** | |||||||
4918363-C-A | 5050322-C-A | ** | |||||||
4919538-T-A | 5051497-T-A | ** | |||||||
4919571-C-G | 5051530-C-G | ** | |||||||
4919589-A-C | 5051548-A-C | ** | |||||||
4932108-G-T | 5064067-G-T | ** | |||||||
4945938-C-A | 5077897-C-A | ** | |||||||
4957728-C-A | 5089687-C-A | ** | |||||||
4995496-T-G | 5127455-T-G | ** | |||||||
4996315-C-G | 5128274-C-G | ** | |||||||
5059629-C-A | 5191588-C-A | ** | |||||||
5125629-C-G | 5257588-C-G | ** | |||||||
5125652-C-A | 5257611-C-A | ** | |||||||
5176425-C-A | 5308384-C-A | ** | |||||||
5200718-C-T | 5332677-C-T | ** | |||||||
5224653-C-T | 5356612-C-T | ** | |||||||
5242491-T-G | 5374450-T-G | ** | |||||||
5244546-A-C | 5376505-A-C | ** | |||||||
5244626-G-C | 5376585-G-C | ** | |||||||
5289165-C-A | 5421124-C-A | ** | |||||||
5293867-T-G | 5425826-T-G | ** | |||||||
5418309-C-T | 5550268-C-T | FGC82014 | ** | ||||||
5449463-C-G | 5581422-C-G | ** | |||||||
5462178-T-G | 5594137-T-G | ** | |||||||
5462216-G-A | 5594175-G-A | ** | |||||||
5462228-A-G | 5594187-A-G | ** | |||||||
5462251-G-A | 5594210-G-A | ** | |||||||
5592110-G-T | 5724069-G-T | FT92981 | ** | ||||||
5600868-C-G | 5732827-C-G | ** | |||||||
5601048-A-T | 5733007-A-T | ** | |||||||
5620596-C-A | 5752555-C-A | ** | |||||||
5633799-G-T | 5765758-G-T | ** | |||||||
5664443-T-A | 5796402-T-A | ** | |||||||
5664497-T-C | 5796456-T-C | ** | |||||||
5683974-C-T | 5815933-C-T | ** | |||||||
5755095-A-T | 5887054-A-T | ** | |||||||
5756830-A-C | 5888789-A-C | ** | |||||||
5795255-C-A | 5927214-C-A | ** | |||||||
5796687-A-T | 5928646-A-T | ** | |||||||
5817692-C-A | 5949651-C-A | ** | |||||||
5957046-C-A | 6089005-C-A | ** | |||||||
6039787-A-C | 6171746-A-C | ** | |||||||
6149697-A-G | 6281656-A-G | FTB32243 | IR3_Dst | ** | |||||
6223464-A-G | 6355423-A-G | IR3_Dst | ** | ||||||
6223597-G-T | 6355556-G-T | IR3_Dst | ** | ||||||
6338903-C-A | 6470862-C-A | IR3_Dst | ** | ||||||
6339054-A-C | 6471013-A-C | IR3_Dst | ** | ||||||
6339071-G-T | 6471030-G-T | IR3_Dst | ** | ||||||
6368894-A-C | 6500853-A-C | ** | |||||||
6510129-C-G | 6642088-C-G | ** | |||||||
6510532-A-C | 6642491-A-C | ** | |||||||
6512144-G-T | 6644103-G-T | ** | |||||||
6523643-A-C | 6655602-A-C | ** | |||||||
6596102-T-C | 6728061-T-C | ** | |||||||
6642832-C-G | 6774791-C-G | ** | |||||||
6644753-C-A | 6776712-C-A | ** | |||||||
6651421-G-T | 6783380-G-T | ** | |||||||
6674565-A-G | 6806524-A-G | ** | |||||||
6776007-C-T | 6907966-C-T | ** | |||||||
6809414-T-A | 6941373-T-A | ** | |||||||
6818965-A-C | 6950924-A-C | ** | |||||||
6865362-C-A | 6997321-C-A | ** | |||||||
6944096-A-G | 7076055-A-G | ** | |||||||
6957660-CT-C | 7089619-CT-C | ** | |||||||
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18789782-A-C | 16677902-A-C | ** | |||||||
18816827-C-A | 16704947-C-A | ** | |||||||
18819512-G-C | 16707632-G-C | ** | |||||||
18845866-C-A | 16733986-C-A | ** | |||||||
18892436-C-A | 16780556-C-A | ** | |||||||
18895544-T-C | 16783664-T-C | ** | |||||||
18905518-T-G | 16793638-T-G | ** | |||||||
18908066-A-T | 16796186-A-T | ** | |||||||
18937273-G-C | 16825393-G-C | ** | |||||||
19007738-C-A | 16895858-C-A | ** | |||||||
19063009-G-T | 16951129-G-T | ** | |||||||
19072618-A-C | 16960738-A-C | ** | |||||||
19088500-CA-C | 16976620-CA-C | ** | |||||||
19168754-T-A | 17056874-T-A | ** | |||||||
19246776-C-G | 17134896-C-G | ** | |||||||
19248808-T-G | 17136928-T-G | ** | |||||||
19248839-T-G | 17136959-T-G | ** | |||||||
19297173-G-C | 17185293-G-C | ** | |||||||
19425778-T-A | 17313898-T-A | ** | |||||||
19460137-C-A | 17348257-C-A | ** | |||||||
19531387-C-G | 17419507-C-G | ** | |||||||
19539632-T-C | 17427752-T-C | ** | |||||||
19544180-C-T | 17432300-C-T | ** | |||||||
19600470-A-T | 17488590-A-T | P5_Prx | ** | ||||||
19774517-C-A | 17662637-C-A | P5_Prx | ** | ||||||
19815667-T-TG | 17703787-T-TG | P5_Prx | ** | ||||||
19900608-T-G | 17788728-T-G | P5_Prx | ** | ||||||
19900624-T-C | 17788744-T-C | P5_Prx | ** | ||||||
19900626-T-C | 17788746-T-C | P5_Prx | ** | ||||||
19900638-A-T | 17788758-A-T | P5_Prx | ** | ||||||
19900653-G-C | 17788773-G-C | P5_Prx | ** | ||||||
20000142-A-C | 17888262-A-C | P5_Prx | ** | ||||||
20000157-A-C | 17888277-A-C | P5_Prx | ** | ||||||
20000189-A-C | 17888309-A-C | P5_Prx | ** | ||||||
20000191-A-C | 17888311-A-C | P5_Prx | ** | ||||||
20000203-T-C | 17888323-T-C | P5_Prx | ** | ||||||
20640327-TGCCA-T | 18478441-TGCCA-T | P4_Prx | ** | ||||||
20693586-T-A | 18531700-T-A | P4_Prx | ** | ||||||
20773810-T-C | 18611924-T-C | P4_Prx | ** | ||||||
21042099-T-A | 18880213-T-A | ** | |||||||
21042136-T-A | 18880250-T-A | ** | |||||||
21110076-A-T | 18948190-A-T | ** | |||||||
21177043-CAA-C | 19015157-CAA-C | 11×A | ** | ||||||
21207082-T-A | 19045196-T-A | ** | |||||||
21268231-T-C | 19106345-T-C | ** | |||||||
21315144-T-C | 19153258-T-C | ** | |||||||
21361883-T-C | 19199997-T-C | ** | |||||||
21361893-A-C | 19200007-A-C | ** | |||||||
21371283-C-T | 19209397-C-T | 10×T | ** | ||||||
21380870-G-T | 19218984-G-T | ** | |||||||
21393457-T-G | 19231571-T-G | ** | |||||||
21394578-C-A | 19232692-C-A | ** | |||||||
21477028-T-A | 19315142-T-A | ** | |||||||
21497031-T-G | 19335145-T-G | ** | |||||||
21500366-C-A | 19338480-C-A | ** | |||||||
21511301-A-C | 19349415-A-C | ** | |||||||
21678802-A-G | 19516916-A-G | ** | |||||||
21807279-C-A | 19645393-C-A | ** | |||||||
21832420-C-T | 19670534-C-T | ** | |||||||
21834146-A-T | 19672260-A-T | ** | |||||||
21834157-T-G | 19672271-T-G | ** | |||||||
21834163-A-G | 19672277-A-G | ** | |||||||
21958766-C-G | 19796880-C-G | ** | |||||||
21969461-A-G | 19807575-A-G | ** | |||||||
22010420-T-C | 19848534-T-C | ** | |||||||
22013145-G-T | 19851259-G-T | ** | |||||||
22060388-T-G | 19898502-T-G | ** | |||||||
22075777-A-C | 19913891-A-C | ** | |||||||
22080822-A-G | 19918936-A-G | ** | |||||||
22226594-T-C | 20064708-T-C | DYZ19 | ** | ||||||
22226611-C-T | 20064725-C-T | DYZ19 | ** | ||||||
22226628-G-C | 20064742-G-C | DYZ19 | ** | ||||||
22226655-A-C | 20064769-A-C | DYZ19 | ** | ||||||
22226656-A-C | 20064770-A-C | BY1833 | DYZ19 | ** | |||||
22226667-A-T | 20064781-A-T | DYZ19 | ** | ||||||
22260683-T-C | 20098797-T-C | DYZ19 | ** | ||||||
22612000-G-A | 20450114-G-A | ** | |||||||
22623874-C-A | 20461988-C-A | ** | |||||||
22660913-G-T | 20499027-G-T | ** | |||||||
22690830-C-T | 20528944-C-T | ** | |||||||
22774883-T-C | 20612997-T-C | ** | |||||||
22804101-C-A | 20642215-C-A | ** | |||||||
22994896-C-A | 20833010-C-A | ** | |||||||
23005326-T-C | 20843440-T-C | ** | |||||||
23019990-A-T | 20858104-A-T | ** | |||||||
23045455-G-T | 20883569-G-T | ** | |||||||
23047656-G-T | 20885770-G-T | ** | |||||||
23047667-T-G | 20885781-T-G | ** | |||||||
23055993-G-T | 20894107-G-T | ** | |||||||
23065484-T-G | 20903598-T-G | ** | |||||||
23066976-C-A | 20905090-C-A | ** | |||||||
23082126-C-A | 20920240-C-A | ** | |||||||
23084151-T-G | 20922265-T-G | ** | |||||||
23084158-T-G | 20922272-T-G | ** | |||||||
23104681-A-G | 20942795-A-G | ** | |||||||
23152671-A-T | 20990785-A-T | ** | |||||||
23267253-G-T | 21105367-G-T | ** | |||||||
23340676-A-T | 21178790-A-T | ** | |||||||
23340762-T-C | 21178876-T-C | ** | |||||||
23389596-C-A | 21227710-C-A | ** | |||||||
23391617-C-G | 21229731-C-G | ** | |||||||
23476235-G-A | 21314349-G-A | ** | |||||||
23734347-G-T | 21572461-G-T | 5×GCA | ** | ||||||
23875353-A-C | 21713467-A-C | ** | |||||||
23875383-C-A | 21713497-C-A | ** | |||||||
24373244-C-A | 22227097-C-A | ** | |||||||
24402482-T-C | 22256335-T-C | ** | |||||||
24877189-A-C | 22731042-A-C | g1 | ** | ||||||
25849243-A-T | 23703096-A-T | P1_Y1 | ** | ||||||
25966171-T-G | 23820024-T-G | P1_Y1 | ** | ||||||
25966184-T-A | 23820037-T-A | P1_Y1 | ** | ||||||
25966193-G-T | 23820046-G-T | P1_Y1 | ** | ||||||
25985538-A-C | 23839391-A-C | P1_Y1 | ** | ||||||
26379163-A-C | 24233016-A-C | P1_Y1 | ** | ||||||
27523364-A-T | 25377217-A-T | P1_Y2 | ** | ||||||
27861627-T-G | 25715480-T-G | P1_Y2 | ** | ||||||
28170052-C-G | 26023905-C-G | P1_b4 | ** | ||||||
28170066-C-A | 26023919-C-A | P1_b4 | ** | ||||||
28369913-C-T | 26223766-C-T | P1_gr2 | ** | ||||||
28390992-C-A | 26244845-C-A | P1_gr2 | ** | ||||||
28480345-A-C | 26334198-A-C | ** | |||||||
28504637-A-G | 26358490-A-G | ** | |||||||
28507671-T-G | 26361524-T-G | ** | |||||||
28532137-A-G | 26385990-A-G | ** | |||||||
28562415-C-A | 26416268-C-A | ** | |||||||
28580313-C-A | 26434166-C-A | ** | |||||||
28600539-T-G | 26454392-T-G | ** | |||||||
28608449-A-T | 26462302-A-T | ** | |||||||
28611691-T-G | 26465544-T-G | ** | |||||||
28611710-T-G | 26465563-T-G | ** | |||||||
28614652-A-C | 26468505-A-C | ** | |||||||
28614696-G-A | 26468549-G-A | ** | |||||||
28622011-G-T | 26475864-G-T | ** | |||||||
28622715-C-A | 26476568-C-A | ** | |||||||
28633555-C-A | 26487408-C-A | ** | |||||||
28636191-C-A | 26490044-C-A | ** | |||||||
28705175-A-C | 26559028-A-C | ** | |||||||
28705193-A-C | 26559046-A-C | ** | |||||||
28716292-C-A | 26570145-C-A | ** | |||||||
28731074-T-G | 26584927-T-G | ** | |||||||
28733419-G-T | 26587272-G-T | ** | |||||||
28734317-G-T | 26588170-G-T | ** | |||||||
28739881-C-A | 26593734-C-A | ** | |||||||
28767214-C-A | 26621067-C-A | FGC51264 | ** | ||||||
28778950-A-G | 26632803-A-G | ** | |||||||
28779005-A-T | 26632858-A-T | ** | |||||||
56714107-G-T | ** | ||||||||
56841913-T-A | ** | ||||||||
56854461-A-G | ** | ||||||||
56854785-TG-T | ** | ||||||||
13433681-G-C | 11278005-G-C | *** | |||||||
13850547-C-A | 11729841-C-A | 7×ATGGA | *** | ||||||
10024072-C-G | 10186463-C-G | *** | |||||||
13825295-A-T | 11704589-A-T | *** | |||||||
13818726-T-A | 11698020-T-A | *** | |||||||
15744252-G-A | 13632372-G-A | L162 | PF5624 CTS4640 | *** | *** | ||||
22360561-G-C | 20198675-G-C | DYZ19 | *** | ||||||
22447313-G-A | 20285427-G-A | DYZ19 | *** | ||||||
24958548-A-T | 22812401-A-T | g1 | *** | ||||||
21663277-AG-A | 19501391-AG-A | *** | |||||||
15276922-C-A | 13165011-C-A | *** | |||||||
22926153-CTTT-C | 20764267-CTTT-C | 13×T | *** | ||||||
14331131-CTTTTT-C | 12210425-CTTTTT-C | 25×T | *** | ||||||
15967476-C-A | 13855596-C-A | *** | |||||||
10825268-T-A | *** | ||||||||
17459485-C-A | 15347605-C-A | 25×A | *** | ||||||
13850565-G-GAACTT | 11729859-G-GAACTT | *** | |||||||
13850553-A-C | 11729847-A-C | *** | |||||||
13850564-T-A | 11729858-T-A | *** | |||||||
15527930-C-A | 13416050-C-A | *** | |||||||
16539611-C-A | 14427731-C-A | *** | |||||||
21390778-C-A | 19228892-C-A | *** | |||||||
13458721-C-T | 11303045-C-T | *** | |||||||
13458732-A-G | 11303056-A-G | *** | |||||||
17375794-G-T | 15263914-G-T | *** | |||||||
10785269-A-G | *** | ||||||||
10683374-C-A | FT428900 | *** | |||||||
23377270-C-A | 21215384-C-A | *** | |||||||
19061412-C-A | 16949532-C-A | *** | |||||||
15584866-C-T | 13472986-C-T | BY190780 | *** | ||||||
13478257-G-A,C | 11322581-G-A,C | *** | |||||||
8401083-CAA-C,CA | 8533042-CAA-C,CA | 14×A | *** | ||||||
24446741-C-A | 22300594-C-A | *** | |||||||
10772612-G-T | *** | ||||||||
6513330-C-A | 6645289-C-A | *** | |||||||
2768175-A-G | 2900134-A-G | *** | |||||||
2768190-GA-G | 2900149-GA-G | *** | |||||||
6669389-GT-G | 6801348-GT-G | 10×T | *** | ||||||
7168587-C-A | 7300546-C-A | *** | |||||||
7172087-G-A | 7304046-G-A | *** | |||||||
7386412-C-A | 7518371-C-A | *** | |||||||
8501508-C-T | 8633467-C-T | *** | |||||||
8852629-C-A | 8984588-C-A | *** | |||||||
10668611-C-A | *** | ||||||||
10895812-T-A,G | *** | ||||||||
13196272-C-A | 11040596-C-A | *** | |||||||
13219944-C-A | 11064268-C-A | *** | |||||||
13452431-C-T | 11296755-C-T | *** | |||||||
13453198-CGG-C | 11297522-CGG-C | *** | |||||||
13453204-CA-C,GA | 11297528-CA-C,GA | *** | |||||||
13453207-TCAA-T | 11297531-TCAA-T | *** | |||||||
14180811-G-C | 12060105-G-C | *** | |||||||
14479435-C-A | 12358704-C-A | *** | |||||||
15126646-A-T | 13014733-A-T | *** | |||||||
15722744-GC-G | 13610864-GC-G | *** | |||||||
16909178-CTTTT-C,CTTT | 14797298-CTTTT-C,CTTT | 16×T | *** | ||||||
17090552-C-A | 14978672-C-A | *** | |||||||
17302274-C-G | 15190394-C-G | *** | |||||||
18158696-A-G | 16046816-A-G | *** | |||||||
18901319-C-A | 16789439-C-A | *** | |||||||
18906102-C-A | 16794222-C-A | *** | |||||||
19040231-T-G | 16928351-T-G | *** | |||||||
19124286-G-T | 17012406-G-T | *** | |||||||
19213270-C-A | 17101390-C-A | *** | |||||||
19319739-C-A | 17207859-C-A | *** | |||||||
21201472-C-A | 19039586-C-A | *** | |||||||
21556761-C-A | 19394875-C-A | *** | |||||||
21773765-TAG-T | 19611879-TAG-T | *** | |||||||
22629607-G-A | 20467721-G-A | *** | |||||||
22629622-C-G | 20467736-C-G | *** | |||||||
24205465-C-T | 22059318-C-T | P3_b1 | *** | ||||||
27216728-C-T | 25070581-C-T | P1_g3 | *** | ||||||
28570124-C-A | 26423977-C-A | *** | |||||||
28622347-A-G | 26476200-A-G | *** | |||||||
56826877-GAGACTGTACT-G,GGACTGTACT | *** | ||||||||
56830306-T-G | *** | ||||||||
56830311-G-GCCATTCCACT | *** |
In the table above, the meaning of the confidence field depends on whether the data comes from an FTDNA kit or an FGC kit. For FTDNA kits, + implies a "PASS" result with just one possible variant, * indicates a "PASS" but with multiple variants, ** indicates "REJECTED" with just a single variant, and *** indicates "REJECTED" with multiple possible variants. 'A*' are heterozygous variants not called by FTDNA, but still pulled from the VCF file. For FGC kits, + indicates over 99% likely genuine (95% for INDELs); * over 95% likely genuine (90% for INDELs); ** about 40% likely genuine; *** about 10% likely genuine. Manual entries read directly from a BAM file will be either + indicating positive, or * indicating that the data show a mixture of possible variants.
For the FTDNA kits, the BED data is encoded in the background color of the cells. Those cells with a white background have coverage, those with a grey background indicate no coverage in the BED file, and those with a pink background indicate the mutation is on the edge of a coverage region. These pink regions often indicate that the individual may be positive for a SNP even if there is no corresponding entry in the vcf file.
The combBED column indicates whether or not the mutation is a SNP and falls in the combBED region defined in Defining a New Rate Constant for Y-Chromosome SNPs based on Full Sequencing Data by Dmitry Adamov, Vladimir Guryanov, Sergey Karzhavin, Vladimir Tagankin, Vadim Urasin.
The McDonald BED column indicates whether or not the mutation is a SNP and falls in the BED region used by Dr. Iain McDonald in the age analysis he does for R-U106 men.